##gff-version 3
HG03009_chrY	CAT	gene	74635	76413	.	-	.	source_gene_common_name=LOC124905300;source_gene=hg002_chrY_paternal_1;alternative_source_transcripts=hg002_chrY_paternal_1.1;gene_id=HG03009_ch_G0000001;gene_biotype=protein_coding;gene_name=LOC124905300;gene_sources=liftoff,augTM,transMap;ID=HG03009_ch_G0000001;Name=LOC124905300
HG03009_chrY	CAT	transcript	74635	76413	9910	-	.	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.182;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;alternative_source_transcripts=hg002_chrY_paternal_1.1;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000001;gene_id=HG03009_ch_G0000001;Parent=HG03009_ch_G0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=HG03009_ch_T0000001;Name=LOC124905300
HG03009_chrY	CAT	exon	74635	74664	.	-	.	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.182;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;alternative_source_transcripts=hg002_chrY_paternal_1.1;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000001;gene_id=HG03009_ch_G0000001;Parent=HG03009_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=exon:HG03009_ch_T0000001:0;Name=LOC124905300;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	74635	74664	.	-	0	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.182;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;alternative_source_transcripts=hg002_chrY_paternal_1.1;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000001;gene_id=HG03009_ch_G0000001;Parent=HG03009_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=CDS:HG03009_ch_T0000001:0;Name=LOC124905300;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	74635	74637	.	-	0	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.182;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;alternative_source_transcripts=hg002_chrY_paternal_1.1;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000001;gene_id=HG03009_ch_G0000001;Parent=HG03009_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=stop_codon:HG03009_ch_T0000001;Name=LOC124905300;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	74665	74739	.	-	.	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.182;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;alternative_source_transcripts=hg002_chrY_paternal_1.1;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000001;gene_id=HG03009_ch_G0000001;Parent=HG03009_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=intron:HG03009_ch_T0000001:0;Name=LOC124905300;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	74740	75237	.	-	.	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.182;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;alternative_source_transcripts=hg002_chrY_paternal_1.1;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000001;gene_id=HG03009_ch_G0000001;Parent=HG03009_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=exon:HG03009_ch_T0000001:1;Name=LOC124905300;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	74740	75237	.	-	0	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.182;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;alternative_source_transcripts=hg002_chrY_paternal_1.1;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000001;gene_id=HG03009_ch_G0000001;Parent=HG03009_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=CDS:HG03009_ch_T0000001:1;Name=LOC124905300;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	75238	75477	.	-	.	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.182;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;alternative_source_transcripts=hg002_chrY_paternal_1.1;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000001;gene_id=HG03009_ch_G0000001;Parent=HG03009_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=intron:HG03009_ch_T0000001:1;Name=LOC124905300;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	75478	75848	.	-	.	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.182;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;alternative_source_transcripts=hg002_chrY_paternal_1.1;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000001;gene_id=HG03009_ch_G0000001;Parent=HG03009_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=exon:HG03009_ch_T0000001:2;Name=LOC124905300;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	75478	75848	.	-	2	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.182;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;alternative_source_transcripts=hg002_chrY_paternal_1.1;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000001;gene_id=HG03009_ch_G0000001;Parent=HG03009_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=CDS:HG03009_ch_T0000001:2;Name=LOC124905300;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	75849	76155	.	-	.	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.182;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;alternative_source_transcripts=hg002_chrY_paternal_1.1;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000001;gene_id=HG03009_ch_G0000001;Parent=HG03009_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=intron:HG03009_ch_T0000001:2;Name=LOC124905300;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	76156	76193	.	-	.	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.182;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;alternative_source_transcripts=hg002_chrY_paternal_1.1;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000001;gene_id=HG03009_ch_G0000001;Parent=HG03009_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=exon:HG03009_ch_T0000001:3;Name=LOC124905300;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	76156	76193	.	-	1	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.182;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;alternative_source_transcripts=hg002_chrY_paternal_1.1;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000001;gene_id=HG03009_ch_G0000001;Parent=HG03009_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=CDS:HG03009_ch_T0000001:3;Name=LOC124905300;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	76194	76372	.	-	.	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.182;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;alternative_source_transcripts=hg002_chrY_paternal_1.1;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000001;gene_id=HG03009_ch_G0000001;Parent=HG03009_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=intron:HG03009_ch_T0000001:3;Name=LOC124905300;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	76373	76413	.	-	.	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.182;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;alternative_source_transcripts=hg002_chrY_paternal_1.1;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000001;gene_id=HG03009_ch_G0000001;Parent=HG03009_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=exon:HG03009_ch_T0000001:4;Name=LOC124905300;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	76373	76413	.	-	0	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.182;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;alternative_source_transcripts=hg002_chrY_paternal_1.1;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000001;gene_id=HG03009_ch_G0000001;Parent=HG03009_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=CDS:HG03009_ch_T0000001:4;Name=LOC124905300;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	76411	76413	.	-	0	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.182;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;alternative_source_transcripts=hg002_chrY_paternal_1.1;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000001;gene_id=HG03009_ch_G0000001;Parent=HG03009_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=start_codon:HG03009_ch_T0000001;Name=LOC124905300;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	80722	101999	.	+	.	source_gene_common_name=PLCXD1;source_gene=hg002_chrY_paternal_2;gene_id=HG03009_ch_G0000002;gene_biotype=protein_coding;gene_name=PLCXD1;gene_sources=liftoff,augTM,transMap;ID=HG03009_ch_G0000002;Name=PLCXD1
HG03009_chrY	CAT	transcript	80722	101999	9950	+	.	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=299.897;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000002;gene_id=HG03009_ch_G0000002;Parent=HG03009_ch_G0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=HG03009_ch_T0000002;Name=PLCXD1
HG03009_chrY	CAT	exon	80722	81024	.	+	.	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000002;gene_id=HG03009_ch_G0000002;Parent=HG03009_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03009_ch_T0000002:0;Name=PLCXD1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	81025	83498	.	+	.	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000002;gene_id=HG03009_ch_G0000002;Parent=HG03009_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03009_ch_T0000002:0;Name=PLCXD1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	83499	83646	.	+	.	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000002;gene_id=HG03009_ch_G0000002;Parent=HG03009_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03009_ch_T0000002:1;Name=PLCXD1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	83520	83646	.	+	0	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000002;gene_id=HG03009_ch_G0000002;Parent=HG03009_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03009_ch_T0000002:0;Name=PLCXD1;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	83520	83522	.	+	0	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000002;gene_id=HG03009_ch_G0000002;Parent=HG03009_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=start_codon:HG03009_ch_T0000002;Name=PLCXD1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	83647	88006	.	+	.	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000002;gene_id=HG03009_ch_G0000002;Parent=HG03009_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03009_ch_T0000002:1;Name=PLCXD1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	88007	88143	.	+	.	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000002;gene_id=HG03009_ch_G0000002;Parent=HG03009_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03009_ch_T0000002:2;Name=PLCXD1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	88007	88143	.	+	2	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000002;gene_id=HG03009_ch_G0000002;Parent=HG03009_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03009_ch_T0000002:1;Name=PLCXD1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	88144	89922	.	+	.	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000002;gene_id=HG03009_ch_G0000002;Parent=HG03009_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03009_ch_T0000002:2;Name=PLCXD1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	89923	90051	.	+	.	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000002;gene_id=HG03009_ch_G0000002;Parent=HG03009_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03009_ch_T0000002:3;Name=PLCXD1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	89923	90051	.	+	0	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000002;gene_id=HG03009_ch_G0000002;Parent=HG03009_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03009_ch_T0000002:2;Name=PLCXD1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	90052	90649	.	+	.	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000002;gene_id=HG03009_ch_G0000002;Parent=HG03009_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03009_ch_T0000002:3;Name=PLCXD1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	90650	90805	.	+	.	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000002;gene_id=HG03009_ch_G0000002;Parent=HG03009_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03009_ch_T0000002:4;Name=PLCXD1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	90650	90805	.	+	0	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000002;gene_id=HG03009_ch_G0000002;Parent=HG03009_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03009_ch_T0000002:3;Name=PLCXD1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	90806	92185	.	+	.	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000002;gene_id=HG03009_ch_G0000002;Parent=HG03009_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03009_ch_T0000002:4;Name=PLCXD1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	92186	92369	.	+	.	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000002;gene_id=HG03009_ch_G0000002;Parent=HG03009_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03009_ch_T0000002:5;Name=PLCXD1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	92186	92369	.	+	0	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000002;gene_id=HG03009_ch_G0000002;Parent=HG03009_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03009_ch_T0000002:4;Name=PLCXD1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	92370	97749	.	+	.	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000002;gene_id=HG03009_ch_G0000002;Parent=HG03009_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03009_ch_T0000002:5;Name=PLCXD1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	97750	101999	.	+	.	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000002;gene_id=HG03009_ch_G0000002;Parent=HG03009_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03009_ch_T0000002:6;Name=PLCXD1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	97750	97988	.	+	2	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000002;gene_id=HG03009_ch_G0000002;Parent=HG03009_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03009_ch_T0000002:5;Name=PLCXD1;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	97986	97988	.	+	0	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000002;gene_id=HG03009_ch_G0000002;Parent=HG03009_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=stop_codon:HG03009_ch_T0000002;Name=PLCXD1;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	80722	101999	1000	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=298.846;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000003;gene_id=HG03009_ch_G0000002;Parent=HG03009_ch_G0000002;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=HG03009_ch_T0000003;Name=PLCXD1
HG03009_chrY	CAT	exon	80722	81024	.	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=298.846;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000003;gene_id=HG03009_ch_G0000002;Parent=HG03009_ch_T0000003;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=exon:HG03009_ch_T0000003:0;Name=PLCXD1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	81025	83498	.	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=298.846;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000003;gene_id=HG03009_ch_G0000002;Parent=HG03009_ch_T0000003;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=intron:HG03009_ch_T0000003:0;Name=PLCXD1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	83499	83646	.	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=298.846;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000003;gene_id=HG03009_ch_G0000002;Parent=HG03009_ch_T0000003;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=exon:HG03009_ch_T0000003:1;Name=PLCXD1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	83647	88006	.	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=298.846;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000003;gene_id=HG03009_ch_G0000002;Parent=HG03009_ch_T0000003;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=intron:HG03009_ch_T0000003:1;Name=PLCXD1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	88007	88143	.	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=298.846;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000003;gene_id=HG03009_ch_G0000002;Parent=HG03009_ch_T0000003;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=exon:HG03009_ch_T0000003:2;Name=PLCXD1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	88144	89922	.	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=298.846;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000003;gene_id=HG03009_ch_G0000002;Parent=HG03009_ch_T0000003;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=intron:HG03009_ch_T0000003:2;Name=PLCXD1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	89923	90051	.	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=298.846;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000003;gene_id=HG03009_ch_G0000002;Parent=HG03009_ch_T0000003;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=exon:HG03009_ch_T0000003:3;Name=PLCXD1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	90052	90649	.	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=298.846;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000003;gene_id=HG03009_ch_G0000002;Parent=HG03009_ch_T0000003;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=intron:HG03009_ch_T0000003:3;Name=PLCXD1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	90650	90805	.	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=298.846;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000003;gene_id=HG03009_ch_G0000002;Parent=HG03009_ch_T0000003;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=exon:HG03009_ch_T0000003:4;Name=PLCXD1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	90806	92185	.	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=298.846;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000003;gene_id=HG03009_ch_G0000002;Parent=HG03009_ch_T0000003;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=intron:HG03009_ch_T0000003:4;Name=PLCXD1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	92186	92369	.	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=298.846;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000003;gene_id=HG03009_ch_G0000002;Parent=HG03009_ch_T0000003;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=exon:HG03009_ch_T0000003:5;Name=PLCXD1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	92370	97749	.	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=298.846;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000003;gene_id=HG03009_ch_G0000002;Parent=HG03009_ch_T0000003;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=intron:HG03009_ch_T0000003:5;Name=PLCXD1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	97750	98432	.	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=298.846;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000003;gene_id=HG03009_ch_G0000002;Parent=HG03009_ch_T0000003;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=exon:HG03009_ch_T0000003:6;Name=PLCXD1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	98433	100546	.	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=298.846;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000003;gene_id=HG03009_ch_G0000002;Parent=HG03009_ch_T0000003;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=intron:HG03009_ch_T0000003:6;Name=PLCXD1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	100547	101999	.	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=298.846;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000003;gene_id=HG03009_ch_G0000002;Parent=HG03009_ch_T0000003;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=exon:HG03009_ch_T0000003:7;Name=PLCXD1;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	82851	101999	9910	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.56366666666665;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000004;gene_id=HG03009_ch_G0000002;Parent=HG03009_ch_G0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=HG03009_ch_T0000004;Name=PLCXD1
HG03009_chrY	CAT	exon	82851	82965	.	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.56366666666665;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000004;gene_id=HG03009_ch_G0000002;Parent=HG03009_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03009_ch_T0000004:0;Name=PLCXD1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	82966	83498	.	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.56366666666665;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000004;gene_id=HG03009_ch_G0000002;Parent=HG03009_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03009_ch_T0000004:0;Name=PLCXD1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	83499	83646	.	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.56366666666665;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000004;gene_id=HG03009_ch_G0000002;Parent=HG03009_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03009_ch_T0000004:1;Name=PLCXD1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	83520	83646	.	+	0	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.56366666666665;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000004;gene_id=HG03009_ch_G0000002;Parent=HG03009_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03009_ch_T0000004:0;Name=PLCXD1;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	83520	83522	.	+	0	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.56366666666665;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000004;gene_id=HG03009_ch_G0000002;Parent=HG03009_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=start_codon:HG03009_ch_T0000004;Name=PLCXD1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	83647	88006	.	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.56366666666665;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000004;gene_id=HG03009_ch_G0000002;Parent=HG03009_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03009_ch_T0000004:1;Name=PLCXD1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	88007	88143	.	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.56366666666665;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000004;gene_id=HG03009_ch_G0000002;Parent=HG03009_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03009_ch_T0000004:2;Name=PLCXD1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	88007	88143	.	+	2	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.56366666666665;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000004;gene_id=HG03009_ch_G0000002;Parent=HG03009_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03009_ch_T0000004:1;Name=PLCXD1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	88144	89922	.	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.56366666666665;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000004;gene_id=HG03009_ch_G0000002;Parent=HG03009_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03009_ch_T0000004:2;Name=PLCXD1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	89923	90051	.	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.56366666666665;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000004;gene_id=HG03009_ch_G0000002;Parent=HG03009_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03009_ch_T0000004:3;Name=PLCXD1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	89923	90051	.	+	0	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.56366666666665;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000004;gene_id=HG03009_ch_G0000002;Parent=HG03009_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03009_ch_T0000004:2;Name=PLCXD1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	90052	90649	.	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.56366666666665;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000004;gene_id=HG03009_ch_G0000002;Parent=HG03009_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03009_ch_T0000004:3;Name=PLCXD1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	90650	90805	.	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.56366666666665;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000004;gene_id=HG03009_ch_G0000002;Parent=HG03009_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03009_ch_T0000004:4;Name=PLCXD1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	90650	90805	.	+	0	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.56366666666665;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000004;gene_id=HG03009_ch_G0000002;Parent=HG03009_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03009_ch_T0000004:3;Name=PLCXD1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	90806	92185	.	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.56366666666665;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000004;gene_id=HG03009_ch_G0000002;Parent=HG03009_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03009_ch_T0000004:4;Name=PLCXD1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	92186	92369	.	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.56366666666665;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000004;gene_id=HG03009_ch_G0000002;Parent=HG03009_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03009_ch_T0000004:5;Name=PLCXD1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	92186	92369	.	+	0	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.56366666666665;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000004;gene_id=HG03009_ch_G0000002;Parent=HG03009_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03009_ch_T0000004:4;Name=PLCXD1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	92370	97749	.	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.56366666666665;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000004;gene_id=HG03009_ch_G0000002;Parent=HG03009_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03009_ch_T0000004:5;Name=PLCXD1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	97750	101999	.	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.56366666666665;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000004;gene_id=HG03009_ch_G0000002;Parent=HG03009_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03009_ch_T0000004:6;Name=PLCXD1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	97750	97988	.	+	2	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.56366666666665;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000004;gene_id=HG03009_ch_G0000002;Parent=HG03009_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03009_ch_T0000004:5;Name=PLCXD1;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	97986	97988	.	+	0	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.56366666666665;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000004;gene_id=HG03009_ch_G0000002;Parent=HG03009_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=stop_codon:HG03009_ch_T0000004;Name=PLCXD1;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	103403	119433	.	-	.	source_gene_common_name=GTPBP6;source_gene=hg002_chrY_paternal_3;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;gene_id=HG03009_ch_G0000003;gene_biotype=protein_coding;gene_name=GTPBP6;gene_sources=liftoff,augTM;ID=HG03009_ch_G0000003;Name=GTPBP6
HG03009_chrY	CAT	transcript	103403	117482	100	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000005;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_G0000003;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=HG03009_ch_T0000005;Name=GTPBP6
HG03009_chrY	CAT	exon	103403	103841	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000005;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03009_ch_T0000005:0;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	103718	103841	.	-	1	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000005;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03009_ch_T0000005:0;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	103718	103720	.	-	0	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000005;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=stop_codon:HG03009_ch_T0000005;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	103842	105951	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000005;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03009_ch_T0000005:0;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	105952	106104	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000005;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03009_ch_T0000005:1;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	105952	106104	.	-	1	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000005;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03009_ch_T0000005:1;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	106105	106323	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000005;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03009_ch_T0000005:1;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	106324	106472	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000005;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03009_ch_T0000005:2;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	106324	106472	.	-	0	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000005;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03009_ch_T0000005:2;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	106473	111807	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000005;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03009_ch_T0000005:2;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	111808	112016	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000005;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03009_ch_T0000005:3;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	111808	112016	.	-	2	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000005;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03009_ch_T0000005:3;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	112017	113014	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000005;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03009_ch_T0000005:3;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	113015	113413	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000005;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03009_ch_T0000005:4;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	113015	113413	.	-	2	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000005;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03009_ch_T0000005:4;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	113414	114638	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000005;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03009_ch_T0000005:4;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	114639	114706	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000005;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03009_ch_T0000005:5;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	114639	114706	.	-	1	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000005;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03009_ch_T0000005:5;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	114707	115378	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000005;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03009_ch_T0000005:5;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	115379	115509	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000005;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03009_ch_T0000005:6;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	115379	115509	.	-	0	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000005;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03009_ch_T0000005:6;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	115510	115717	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000005;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03009_ch_T0000005:6;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	115718	115788	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000005;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03009_ch_T0000005:7;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	115718	115735	.	-	0	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000005;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03009_ch_T0000005:7;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	115733	115735	.	-	0	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000005;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=start_codon:HG03009_ch_T0000005;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	115789	117416	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000005;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03009_ch_T0000005:7;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	117417	117482	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000005;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03009_ch_T0000005:8;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	103403	119433	100	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000006;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_G0000003;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=HG03009_ch_T0000006;Name=GTPBP6
HG03009_chrY	CAT	exon	103403	103841	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000006;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03009_ch_T0000006:0;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	103718	103841	.	-	1	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000006;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03009_ch_T0000006:0;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	103718	103720	.	-	0	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000006;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=stop_codon:HG03009_ch_T0000006;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	103842	105951	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000006;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03009_ch_T0000006:0;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	105952	106104	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000006;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03009_ch_T0000006:1;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	105952	106104	.	-	1	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000006;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03009_ch_T0000006:1;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	106105	106323	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000006;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03009_ch_T0000006:1;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	106324	106472	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000006;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03009_ch_T0000006:2;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	106324	106472	.	-	0	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000006;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03009_ch_T0000006:2;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	106473	111807	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000006;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03009_ch_T0000006:2;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	111808	112016	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000006;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03009_ch_T0000006:3;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	111808	112016	.	-	2	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000006;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03009_ch_T0000006:3;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	112017	113254	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000006;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03009_ch_T0000006:3;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	113255	113413	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000006;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03009_ch_T0000006:4;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	113255	113413	.	-	2	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000006;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03009_ch_T0000006:4;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	113414	114638	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000006;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03009_ch_T0000006:4;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	114639	114706	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000006;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03009_ch_T0000006:5;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	114639	114706	.	-	1	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000006;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03009_ch_T0000006:5;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	114707	115378	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000006;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03009_ch_T0000006:5;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	115379	115509	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000006;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03009_ch_T0000006:6;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	115379	115509	.	-	0	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000006;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03009_ch_T0000006:6;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	115510	115717	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000006;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03009_ch_T0000006:6;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	115718	115788	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000006;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03009_ch_T0000006:7;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	115718	115788	.	-	2	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000006;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03009_ch_T0000006:7;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	115789	117550	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000006;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03009_ch_T0000006:7;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	117551	117688	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000006;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03009_ch_T0000006:8;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	117551	117688	.	-	2	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000006;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03009_ch_T0000006:8;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	117689	119075	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000006;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03009_ch_T0000006:8;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	119076	119433	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000006;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03009_ch_T0000006:9;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	119076	119424	.	-	0	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000006;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03009_ch_T0000006:9;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	119422	119424	.	-	0	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000006;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=start_codon:HG03009_ch_T0000006;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	103403	119433	100	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000007;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_G0000003;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=HG03009_ch_T0000007;Name=GTPBP6
HG03009_chrY	CAT	exon	103403	103841	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000007;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03009_ch_T0000007:0;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	103718	103841	.	-	1	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000007;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03009_ch_T0000007:0;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	103718	103720	.	-	0	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000007;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=stop_codon:HG03009_ch_T0000007;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	103842	105951	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000007;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03009_ch_T0000007:0;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	105952	106104	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000007;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03009_ch_T0000007:1;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	105952	106104	.	-	1	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000007;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03009_ch_T0000007:1;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	106105	106323	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000007;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03009_ch_T0000007:1;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	106324	106472	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000007;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03009_ch_T0000007:2;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	106324	106472	.	-	0	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000007;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03009_ch_T0000007:2;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	106473	111807	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000007;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03009_ch_T0000007:2;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	111808	112016	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000007;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03009_ch_T0000007:3;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	111808	112016	.	-	2	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000007;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03009_ch_T0000007:3;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	112017	113014	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000007;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03009_ch_T0000007:3;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	113015	113413	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000007;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03009_ch_T0000007:4;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	113015	113413	.	-	2	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000007;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03009_ch_T0000007:4;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	113414	114638	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000007;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03009_ch_T0000007:4;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	114639	114706	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000007;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03009_ch_T0000007:5;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	114639	114706	.	-	1	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000007;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03009_ch_T0000007:5;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	114707	115378	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000007;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03009_ch_T0000007:5;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	115379	115509	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000007;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03009_ch_T0000007:6;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	115379	115509	.	-	0	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000007;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03009_ch_T0000007:6;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	115510	115717	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000007;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03009_ch_T0000007:6;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	115718	115788	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000007;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03009_ch_T0000007:7;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	115718	115788	.	-	2	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000007;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03009_ch_T0000007:7;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	115789	117550	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000007;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03009_ch_T0000007:7;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	117551	117688	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000007;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03009_ch_T0000007:8;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	117551	117688	.	-	2	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000007;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03009_ch_T0000007:8;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	117689	119075	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000007;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03009_ch_T0000007:8;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	119076	119433	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000007;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03009_ch_T0000007:9;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	119076	119424	.	-	0	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000007;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03009_ch_T0000007:9;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	119422	119424	.	-	0	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000007;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=start_codon:HG03009_ch_T0000007;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	103403	119433	100	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000008;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_G0000003;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=HG03009_ch_T0000008;Name=GTPBP6
HG03009_chrY	CAT	exon	103403	103841	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000008;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03009_ch_T0000008:0;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	103718	103841	.	-	1	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000008;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03009_ch_T0000008:0;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	103718	103720	.	-	0	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000008;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=stop_codon:HG03009_ch_T0000008;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	103842	105951	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000008;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03009_ch_T0000008:0;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	105952	106104	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000008;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03009_ch_T0000008:1;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	105952	106104	.	-	1	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000008;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03009_ch_T0000008:1;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	106105	106323	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000008;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03009_ch_T0000008:1;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	106324	106472	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000008;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03009_ch_T0000008:2;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	106324	106472	.	-	0	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000008;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03009_ch_T0000008:2;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	106473	111807	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000008;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03009_ch_T0000008:2;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	111808	112016	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000008;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03009_ch_T0000008:3;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	111808	112016	.	-	2	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000008;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03009_ch_T0000008:3;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	112017	113014	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000008;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03009_ch_T0000008:3;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	113015	113413	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000008;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03009_ch_T0000008:4;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	113015	113413	.	-	2	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000008;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03009_ch_T0000008:4;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	113414	114638	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000008;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03009_ch_T0000008:4;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	114639	114706	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000008;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03009_ch_T0000008:5;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	114639	114706	.	-	1	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000008;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03009_ch_T0000008:5;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	114707	115378	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000008;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03009_ch_T0000008:5;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	115379	115509	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000008;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03009_ch_T0000008:6;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	115379	115509	.	-	0	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000008;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03009_ch_T0000008:6;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	115510	115717	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000008;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03009_ch_T0000008:6;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	115718	115788	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000008;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03009_ch_T0000008:7;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	115718	115788	.	-	2	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000008;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03009_ch_T0000008:7;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	115789	117550	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000008;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03009_ch_T0000008:7;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	117551	117688	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000008;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03009_ch_T0000008:8;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	117551	117620	.	-	0	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000008;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03009_ch_T0000008:8;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	117618	117620	.	-	0	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000008;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=start_codon:HG03009_ch_T0000008;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	117689	117915	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000008;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03009_ch_T0000008:8;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	117916	118121	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000008;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03009_ch_T0000008:9;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	118122	119075	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000008;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03009_ch_T0000008:9;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	119076	119433	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000008;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03009_ch_T0000008:10;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	103403	119433	100	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000009;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_G0000003;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=HG03009_ch_T0000009;Name=GTPBP6
HG03009_chrY	CAT	exon	103403	103841	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000009;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03009_ch_T0000009:0;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	103718	103841	.	-	1	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000009;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03009_ch_T0000009:0;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	103718	103720	.	-	0	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000009;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=stop_codon:HG03009_ch_T0000009;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	103842	105951	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000009;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03009_ch_T0000009:0;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	105952	106104	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000009;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03009_ch_T0000009:1;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	105952	106104	.	-	1	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000009;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03009_ch_T0000009:1;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	106105	106323	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000009;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03009_ch_T0000009:1;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	106324	106472	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000009;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03009_ch_T0000009:2;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	106324	106472	.	-	0	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000009;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03009_ch_T0000009:2;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	106473	111807	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000009;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03009_ch_T0000009:2;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	111808	112016	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000009;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03009_ch_T0000009:3;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	111808	112016	.	-	2	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000009;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03009_ch_T0000009:3;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	112017	113014	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000009;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03009_ch_T0000009:3;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	113015	113413	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000009;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03009_ch_T0000009:4;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	113015	113413	.	-	2	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000009;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03009_ch_T0000009:4;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	113414	114638	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000009;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03009_ch_T0000009:4;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	114639	114706	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000009;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03009_ch_T0000009:5;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	114639	114706	.	-	1	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000009;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03009_ch_T0000009:5;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	114707	115378	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000009;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03009_ch_T0000009:5;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	115379	115509	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000009;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03009_ch_T0000009:6;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	115379	115509	.	-	0	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000009;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03009_ch_T0000009:6;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	115510	115717	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000009;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03009_ch_T0000009:6;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	115718	115788	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000009;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03009_ch_T0000009:7;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	115718	115788	.	-	2	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000009;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03009_ch_T0000009:7;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	115789	117550	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000009;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03009_ch_T0000009:7;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	117551	117688	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000009;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03009_ch_T0000009:8;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	117551	117620	.	-	0	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000009;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03009_ch_T0000009:8;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	117618	117620	.	-	0	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000009;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=start_codon:HG03009_ch_T0000009;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	117689	117915	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000009;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03009_ch_T0000009:8;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	117916	118056	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000009;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03009_ch_T0000009:9;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	118057	119075	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000009;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03009_ch_T0000009:9;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	119076	119433	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000009;gene_id=HG03009_ch_G0000003;Parent=HG03009_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03009_ch_T0000009:10;Name=GTPBP6;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	119782	121970	.	+	.	source_gene_common_name=LINC00685;source_gene=hg002_chrY_paternal_4;gene_id=HG03009_ch_G0000004;gene_biotype=lncRNA;gene_name=LINC00685;gene_sources=liftoff,transMap_pairwise;ID=HG03009_ch_G0000004;Name=LINC00685
HG03009_chrY	CAT	transcript	119782	121970	1000	+	.	source_transcript=hg002_chrY_paternal_4.1;source_transcript_name=hg002_chrY_paternal_4.1;source_gene=hg002_chrY_paternal_4;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_4;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_4.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_4.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00685;AdditionalSources=liftoff;transcript_id=HG03009_ch_T0000010;gene_id=HG03009_ch_G0000004;Parent=HG03009_ch_G0000004;transcript_name=hg002_chrY_paternal_4.1;gene_name=LINC00685;ID=HG03009_ch_T0000010;Name=LINC00685
HG03009_chrY	CAT	exon	119782	120188	.	+	.	source_transcript=hg002_chrY_paternal_4.1;source_transcript_name=hg002_chrY_paternal_4.1;source_gene=hg002_chrY_paternal_4;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_4;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_4.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_4.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00685;AdditionalSources=liftoff;transcript_id=HG03009_ch_T0000010;gene_id=HG03009_ch_G0000004;Parent=HG03009_ch_T0000010;transcript_name=hg002_chrY_paternal_4.1;gene_name=LINC00685;ID=exon:HG03009_ch_T0000010:0;Name=LINC00685;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	120189	120844	.	+	.	source_transcript=hg002_chrY_paternal_4.1;source_transcript_name=hg002_chrY_paternal_4.1;source_gene=hg002_chrY_paternal_4;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_4;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_4.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_4.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00685;AdditionalSources=liftoff;transcript_id=HG03009_ch_T0000010;gene_id=HG03009_ch_G0000004;Parent=HG03009_ch_T0000010;transcript_name=hg002_chrY_paternal_4.1;gene_name=LINC00685;ID=intron:HG03009_ch_T0000010:0;Name=LINC00685;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	120845	121970	.	+	.	source_transcript=hg002_chrY_paternal_4.1;source_transcript_name=hg002_chrY_paternal_4.1;source_gene=hg002_chrY_paternal_4;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_4;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_4.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_4.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00685;AdditionalSources=liftoff;transcript_id=HG03009_ch_T0000010;gene_id=HG03009_ch_G0000004;Parent=HG03009_ch_T0000010;transcript_name=hg002_chrY_paternal_4.1;gene_name=LINC00685;ID=exon:HG03009_ch_T0000010:1;Name=LINC00685;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	119782	121970	1000	+	.	source_transcript=hg002_chrY_paternal_4.2;source_transcript_name=hg002_chrY_paternal_4.1;source_gene=hg002_chrY_paternal_4;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_4;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_4.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_4.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00685;AdditionalSources=liftoff;transcript_id=HG03009_ch_T0000011;gene_id=HG03009_ch_G0000004;Parent=HG03009_ch_G0000004;transcript_name=hg002_chrY_paternal_4.1;gene_name=LINC00685;ID=HG03009_ch_T0000011;Name=LINC00685
HG03009_chrY	CAT	exon	119782	121970	.	+	.	source_transcript=hg002_chrY_paternal_4.2;source_transcript_name=hg002_chrY_paternal_4.1;source_gene=hg002_chrY_paternal_4;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_4;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_4.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_4.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00685;AdditionalSources=liftoff;transcript_id=HG03009_ch_T0000011;gene_id=HG03009_ch_G0000004;Parent=HG03009_ch_T0000011;transcript_name=hg002_chrY_paternal_4.1;gene_name=LINC00685;ID=exon:HG03009_ch_T0000011:0;Name=LINC00685;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	141211	183740	.	-	.	source_gene_common_name=PPP2R3B;source_gene=hg002_chrY_paternal_5;gene_id=HG03009_ch_G0000005;gene_biotype=protein_coding;gene_name=PPP2R3B;gene_sources=liftoff,augTM,transMap;ID=HG03009_ch_G0000005;Name=PPP2R3B
HG03009_chrY	CAT	transcript	141211	183740	9930	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=299.635;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000012;gene_id=HG03009_ch_G0000005;Parent=HG03009_ch_G0000005;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=HG03009_ch_T0000012;Name=PPP2R3B
HG03009_chrY	CAT	exon	141211	141795	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=299.635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000012;gene_id=HG03009_ch_G0000005;Parent=HG03009_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03009_ch_T0000012:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	141645	141795	.	-	1	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=299.635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000012;gene_id=HG03009_ch_G0000005;Parent=HG03009_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03009_ch_T0000012:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	141645	141647	.	-	0	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=299.635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000012;gene_id=HG03009_ch_G0000005;Parent=HG03009_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=stop_codon:HG03009_ch_T0000012;Name=PPP2R3B;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	141796	145833	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=299.635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000012;gene_id=HG03009_ch_G0000005;Parent=HG03009_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03009_ch_T0000012:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	145834	145940	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=299.635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000012;gene_id=HG03009_ch_G0000005;Parent=HG03009_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03009_ch_T0000012:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	145834	145940	.	-	0	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=299.635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000012;gene_id=HG03009_ch_G0000005;Parent=HG03009_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03009_ch_T0000012:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	145941	146007	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=299.635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000012;gene_id=HG03009_ch_G0000005;Parent=HG03009_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03009_ch_T0000012:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	146008	146126	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=299.635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000012;gene_id=HG03009_ch_G0000005;Parent=HG03009_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03009_ch_T0000012:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	146008	146126	.	-	2	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=299.635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000012;gene_id=HG03009_ch_G0000005;Parent=HG03009_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03009_ch_T0000012:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	146127	147890	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=299.635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000012;gene_id=HG03009_ch_G0000005;Parent=HG03009_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03009_ch_T0000012:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	147891	148066	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=299.635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000012;gene_id=HG03009_ch_G0000005;Parent=HG03009_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03009_ch_T0000012:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	147891	148066	.	-	1	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=299.635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000012;gene_id=HG03009_ch_G0000005;Parent=HG03009_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03009_ch_T0000012:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	148067	148393	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=299.635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000012;gene_id=HG03009_ch_G0000005;Parent=HG03009_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03009_ch_T0000012:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	148394	148483	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=299.635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000012;gene_id=HG03009_ch_G0000005;Parent=HG03009_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03009_ch_T0000012:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	148394	148483	.	-	1	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=299.635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000012;gene_id=HG03009_ch_G0000005;Parent=HG03009_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03009_ch_T0000012:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	148484	148960	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=299.635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000012;gene_id=HG03009_ch_G0000005;Parent=HG03009_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03009_ch_T0000012:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	148961	149009	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=299.635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000012;gene_id=HG03009_ch_G0000005;Parent=HG03009_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03009_ch_T0000012:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	148961	149009	.	-	2	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=299.635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000012;gene_id=HG03009_ch_G0000005;Parent=HG03009_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03009_ch_T0000012:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	149010	151431	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=299.635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000012;gene_id=HG03009_ch_G0000005;Parent=HG03009_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03009_ch_T0000012:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	151432	151588	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=299.635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000012;gene_id=HG03009_ch_G0000005;Parent=HG03009_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03009_ch_T0000012:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	151432	151588	.	-	0	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=299.635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000012;gene_id=HG03009_ch_G0000005;Parent=HG03009_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03009_ch_T0000012:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	151589	152095	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=299.635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000012;gene_id=HG03009_ch_G0000005;Parent=HG03009_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03009_ch_T0000012:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	152096	152182	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=299.635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000012;gene_id=HG03009_ch_G0000005;Parent=HG03009_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03009_ch_T0000012:7;Name=PPP2R3B;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	152096	152182	.	-	0	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=299.635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000012;gene_id=HG03009_ch_G0000005;Parent=HG03009_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03009_ch_T0000012:7;Name=PPP2R3B;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	152183	152622	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=299.635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000012;gene_id=HG03009_ch_G0000005;Parent=HG03009_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03009_ch_T0000012:7;Name=PPP2R3B;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	152623	152697	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=299.635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000012;gene_id=HG03009_ch_G0000005;Parent=HG03009_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03009_ch_T0000012:8;Name=PPP2R3B;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	152623	152697	.	-	0	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=299.635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000012;gene_id=HG03009_ch_G0000005;Parent=HG03009_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03009_ch_T0000012:8;Name=PPP2R3B;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	152698	153123	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=299.635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000012;gene_id=HG03009_ch_G0000005;Parent=HG03009_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03009_ch_T0000012:8;Name=PPP2R3B;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	153124	153226	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=299.635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000012;gene_id=HG03009_ch_G0000005;Parent=HG03009_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03009_ch_T0000012:9;Name=PPP2R3B;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	153124	153226	.	-	1	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=299.635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000012;gene_id=HG03009_ch_G0000005;Parent=HG03009_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03009_ch_T0000012:9;Name=PPP2R3B;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	153227	153479	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=299.635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000012;gene_id=HG03009_ch_G0000005;Parent=HG03009_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03009_ch_T0000012:9;Name=PPP2R3B;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	153480	153583	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=299.635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000012;gene_id=HG03009_ch_G0000005;Parent=HG03009_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03009_ch_T0000012:10;Name=PPP2R3B;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	153480	153583	.	-	0	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=299.635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000012;gene_id=HG03009_ch_G0000005;Parent=HG03009_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03009_ch_T0000012:10;Name=PPP2R3B;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	153584	167300	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=299.635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000012;gene_id=HG03009_ch_G0000005;Parent=HG03009_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03009_ch_T0000012:10;Name=PPP2R3B;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	167301	167486	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=299.635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000012;gene_id=HG03009_ch_G0000005;Parent=HG03009_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03009_ch_T0000012:11;Name=PPP2R3B;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	167301	167486	.	-	0	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=299.635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000012;gene_id=HG03009_ch_G0000005;Parent=HG03009_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03009_ch_T0000012:11;Name=PPP2R3B;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	167487	181034	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=299.635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000012;gene_id=HG03009_ch_G0000005;Parent=HG03009_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03009_ch_T0000012:11;Name=PPP2R3B;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	181035	183740	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=299.635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000012;gene_id=HG03009_ch_G0000005;Parent=HG03009_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03009_ch_T0000012:12;Name=PPP2R3B;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	181035	181274	.	-	0	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=299.635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000012;gene_id=HG03009_ch_G0000005;Parent=HG03009_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03009_ch_T0000012:12;Name=PPP2R3B;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	181272	181274	.	-	0	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=299.635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000012;gene_id=HG03009_ch_G0000005;Parent=HG03009_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=start_codon:HG03009_ch_T0000012;Name=PPP2R3B;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	141516	183740	9950	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=299.726;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000013;gene_id=HG03009_ch_G0000005;Parent=HG03009_ch_G0000005;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=HG03009_ch_T0000013;Name=PPP2R3B
HG03009_chrY	CAT	exon	141516	142341	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=299.726;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000013;gene_id=HG03009_ch_G0000005;Parent=HG03009_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03009_ch_T0000013:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	141645	142341	.	-	1	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=299.726;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000013;gene_id=HG03009_ch_G0000005;Parent=HG03009_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03009_ch_T0000013:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	141645	141647	.	-	0	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=299.726;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000013;gene_id=HG03009_ch_G0000005;Parent=HG03009_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=stop_codon:HG03009_ch_T0000013;Name=PPP2R3B;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	142342	145833	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=299.726;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000013;gene_id=HG03009_ch_G0000005;Parent=HG03009_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03009_ch_T0000013:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	145834	145940	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=299.726;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000013;gene_id=HG03009_ch_G0000005;Parent=HG03009_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03009_ch_T0000013:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	145834	145940	.	-	0	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=299.726;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000013;gene_id=HG03009_ch_G0000005;Parent=HG03009_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03009_ch_T0000013:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	145941	146007	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=299.726;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000013;gene_id=HG03009_ch_G0000005;Parent=HG03009_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03009_ch_T0000013:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	146008	146126	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=299.726;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000013;gene_id=HG03009_ch_G0000005;Parent=HG03009_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03009_ch_T0000013:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	146008	146126	.	-	2	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=299.726;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000013;gene_id=HG03009_ch_G0000005;Parent=HG03009_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03009_ch_T0000013:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	146127	147890	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=299.726;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000013;gene_id=HG03009_ch_G0000005;Parent=HG03009_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03009_ch_T0000013:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	147891	148066	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=299.726;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000013;gene_id=HG03009_ch_G0000005;Parent=HG03009_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03009_ch_T0000013:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	147891	148066	.	-	1	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=299.726;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000013;gene_id=HG03009_ch_G0000005;Parent=HG03009_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03009_ch_T0000013:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	148067	148393	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=299.726;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000013;gene_id=HG03009_ch_G0000005;Parent=HG03009_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03009_ch_T0000013:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	148394	148483	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=299.726;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000013;gene_id=HG03009_ch_G0000005;Parent=HG03009_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03009_ch_T0000013:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	148394	148483	.	-	1	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=299.726;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000013;gene_id=HG03009_ch_G0000005;Parent=HG03009_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03009_ch_T0000013:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	148484	148960	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=299.726;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000013;gene_id=HG03009_ch_G0000005;Parent=HG03009_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03009_ch_T0000013:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	148961	149009	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=299.726;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000013;gene_id=HG03009_ch_G0000005;Parent=HG03009_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03009_ch_T0000013:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	148961	149009	.	-	2	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=299.726;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000013;gene_id=HG03009_ch_G0000005;Parent=HG03009_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03009_ch_T0000013:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	149010	151431	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=299.726;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000013;gene_id=HG03009_ch_G0000005;Parent=HG03009_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03009_ch_T0000013:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	151432	151588	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=299.726;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000013;gene_id=HG03009_ch_G0000005;Parent=HG03009_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03009_ch_T0000013:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	151432	151588	.	-	0	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=299.726;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000013;gene_id=HG03009_ch_G0000005;Parent=HG03009_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03009_ch_T0000013:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	151589	152095	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=299.726;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000013;gene_id=HG03009_ch_G0000005;Parent=HG03009_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03009_ch_T0000013:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	152096	152182	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=299.726;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000013;gene_id=HG03009_ch_G0000005;Parent=HG03009_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03009_ch_T0000013:7;Name=PPP2R3B;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	152096	152182	.	-	0	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=299.726;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000013;gene_id=HG03009_ch_G0000005;Parent=HG03009_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03009_ch_T0000013:7;Name=PPP2R3B;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	152183	152622	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=299.726;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000013;gene_id=HG03009_ch_G0000005;Parent=HG03009_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03009_ch_T0000013:7;Name=PPP2R3B;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	152623	152697	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=299.726;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000013;gene_id=HG03009_ch_G0000005;Parent=HG03009_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03009_ch_T0000013:8;Name=PPP2R3B;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	152623	152697	.	-	0	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=299.726;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000013;gene_id=HG03009_ch_G0000005;Parent=HG03009_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03009_ch_T0000013:8;Name=PPP2R3B;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	152698	153123	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=299.726;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000013;gene_id=HG03009_ch_G0000005;Parent=HG03009_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03009_ch_T0000013:8;Name=PPP2R3B;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	153124	153226	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=299.726;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000013;gene_id=HG03009_ch_G0000005;Parent=HG03009_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03009_ch_T0000013:9;Name=PPP2R3B;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	153124	153226	.	-	1	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=299.726;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000013;gene_id=HG03009_ch_G0000005;Parent=HG03009_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03009_ch_T0000013:9;Name=PPP2R3B;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	153227	153479	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=299.726;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000013;gene_id=HG03009_ch_G0000005;Parent=HG03009_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03009_ch_T0000013:9;Name=PPP2R3B;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	153480	153583	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=299.726;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000013;gene_id=HG03009_ch_G0000005;Parent=HG03009_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03009_ch_T0000013:10;Name=PPP2R3B;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	153480	153583	.	-	0	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=299.726;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000013;gene_id=HG03009_ch_G0000005;Parent=HG03009_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03009_ch_T0000013:10;Name=PPP2R3B;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	153584	167300	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=299.726;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000013;gene_id=HG03009_ch_G0000005;Parent=HG03009_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03009_ch_T0000013:10;Name=PPP2R3B;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	167301	167486	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=299.726;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000013;gene_id=HG03009_ch_G0000005;Parent=HG03009_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03009_ch_T0000013:11;Name=PPP2R3B;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	167301	167486	.	-	0	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=299.726;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000013;gene_id=HG03009_ch_G0000005;Parent=HG03009_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03009_ch_T0000013:11;Name=PPP2R3B;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	167487	181034	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=299.726;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000013;gene_id=HG03009_ch_G0000005;Parent=HG03009_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03009_ch_T0000013:11;Name=PPP2R3B;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	181035	183740	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=299.726;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000013;gene_id=HG03009_ch_G0000005;Parent=HG03009_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03009_ch_T0000013:12;Name=PPP2R3B;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	181035	181274	.	-	0	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=299.726;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000013;gene_id=HG03009_ch_G0000005;Parent=HG03009_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03009_ch_T0000013:12;Name=PPP2R3B;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	181272	181274	.	-	0	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=299.726;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000013;gene_id=HG03009_ch_G0000005;Parent=HG03009_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=start_codon:HG03009_ch_T0000013;Name=PPP2R3B;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	237476	279657	.	+	.	source_gene_common_name=LOC102724521;source_gene=hg002_chrY_paternal_6;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;gene_id=HG03009_ch_G0000006;gene_biotype=lncRNA;gene_name=LOC102724521;gene_sources=liftoff;ID=HG03009_ch_G0000006;Name=LOC102724521
HG03009_chrY	CAT	transcript	237476	279657	1000	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=HG03009_ch_T0000014;gene_id=HG03009_ch_G0000006;Parent=HG03009_ch_G0000006;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=HG03009_ch_T0000014;Name=LOC102724521
HG03009_chrY	CAT	exon	237476	237944	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=HG03009_ch_T0000014;gene_id=HG03009_ch_G0000006;Parent=HG03009_ch_T0000014;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:HG03009_ch_T0000014:0;Name=LOC102724521;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	237945	241292	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=HG03009_ch_T0000014;gene_id=HG03009_ch_G0000006;Parent=HG03009_ch_T0000014;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=intron:HG03009_ch_T0000014:0;Name=LOC102724521;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	241293	241550	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=HG03009_ch_T0000014;gene_id=HG03009_ch_G0000006;Parent=HG03009_ch_T0000014;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:HG03009_ch_T0000014:1;Name=LOC102724521;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	241551	243032	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=HG03009_ch_T0000014;gene_id=HG03009_ch_G0000006;Parent=HG03009_ch_T0000014;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=intron:HG03009_ch_T0000014:1;Name=LOC102724521;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	243033	243147	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=HG03009_ch_T0000014;gene_id=HG03009_ch_G0000006;Parent=HG03009_ch_T0000014;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:HG03009_ch_T0000014:2;Name=LOC102724521;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	243148	244676	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=HG03009_ch_T0000014;gene_id=HG03009_ch_G0000006;Parent=HG03009_ch_T0000014;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=intron:HG03009_ch_T0000014:2;Name=LOC102724521;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	244677	244843	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=HG03009_ch_T0000014;gene_id=HG03009_ch_G0000006;Parent=HG03009_ch_T0000014;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:HG03009_ch_T0000014:3;Name=LOC102724521;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	244844	247778	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=HG03009_ch_T0000014;gene_id=HG03009_ch_G0000006;Parent=HG03009_ch_T0000014;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=intron:HG03009_ch_T0000014:3;Name=LOC102724521;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	247779	247851	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=HG03009_ch_T0000014;gene_id=HG03009_ch_G0000006;Parent=HG03009_ch_T0000014;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:HG03009_ch_T0000014:4;Name=LOC102724521;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	247852	248084	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=HG03009_ch_T0000014;gene_id=HG03009_ch_G0000006;Parent=HG03009_ch_T0000014;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=intron:HG03009_ch_T0000014:4;Name=LOC102724521;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	248085	248389	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=HG03009_ch_T0000014;gene_id=HG03009_ch_G0000006;Parent=HG03009_ch_T0000014;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:HG03009_ch_T0000014:5;Name=LOC102724521;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	248390	266390	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=HG03009_ch_T0000014;gene_id=HG03009_ch_G0000006;Parent=HG03009_ch_T0000014;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=intron:HG03009_ch_T0000014:5;Name=LOC102724521;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	266391	267003	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=HG03009_ch_T0000014;gene_id=HG03009_ch_G0000006;Parent=HG03009_ch_T0000014;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:HG03009_ch_T0000014:6;Name=LOC102724521;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	267004	276449	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=HG03009_ch_T0000014;gene_id=HG03009_ch_G0000006;Parent=HG03009_ch_T0000014;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=intron:HG03009_ch_T0000014:6;Name=LOC102724521;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	276450	276570	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=HG03009_ch_T0000014;gene_id=HG03009_ch_G0000006;Parent=HG03009_ch_T0000014;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:HG03009_ch_T0000014:7;Name=LOC102724521;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	276571	277612	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=HG03009_ch_T0000014;gene_id=HG03009_ch_G0000006;Parent=HG03009_ch_T0000014;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=intron:HG03009_ch_T0000014:7;Name=LOC102724521;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	277613	277811	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=HG03009_ch_T0000014;gene_id=HG03009_ch_G0000006;Parent=HG03009_ch_T0000014;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:HG03009_ch_T0000014:8;Name=LOC102724521;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	277812	278417	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=HG03009_ch_T0000014;gene_id=HG03009_ch_G0000006;Parent=HG03009_ch_T0000014;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=intron:HG03009_ch_T0000014:8;Name=LOC102724521;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	278418	279657	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=HG03009_ch_T0000014;gene_id=HG03009_ch_G0000006;Parent=HG03009_ch_T0000014;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:HG03009_ch_T0000014:9;Name=LOC102724521;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	237720	249784	1000	+	.	source_transcript=hg002_chrY_paternal_6.2;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.2,hg002_chrY_paternal_6.2;transcript_id=HG03009_ch_T0000015;gene_id=HG03009_ch_G0000006;Parent=HG03009_ch_G0000006;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=HG03009_ch_T0000015;Name=LOC102724521
HG03009_chrY	CAT	exon	237720	237944	.	+	.	source_transcript=hg002_chrY_paternal_6.2;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.2,hg002_chrY_paternal_6.2;transcript_id=HG03009_ch_T0000015;gene_id=HG03009_ch_G0000006;Parent=HG03009_ch_T0000015;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:HG03009_ch_T0000015:0;Name=LOC102724521;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	237945	241292	.	+	.	source_transcript=hg002_chrY_paternal_6.2;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.2,hg002_chrY_paternal_6.2;transcript_id=HG03009_ch_T0000015;gene_id=HG03009_ch_G0000006;Parent=HG03009_ch_T0000015;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=intron:HG03009_ch_T0000015:0;Name=LOC102724521;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	241293	241550	.	+	.	source_transcript=hg002_chrY_paternal_6.2;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.2,hg002_chrY_paternal_6.2;transcript_id=HG03009_ch_T0000015;gene_id=HG03009_ch_G0000006;Parent=HG03009_ch_T0000015;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:HG03009_ch_T0000015:1;Name=LOC102724521;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	241551	243032	.	+	.	source_transcript=hg002_chrY_paternal_6.2;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.2,hg002_chrY_paternal_6.2;transcript_id=HG03009_ch_T0000015;gene_id=HG03009_ch_G0000006;Parent=HG03009_ch_T0000015;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=intron:HG03009_ch_T0000015:1;Name=LOC102724521;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	243033	243147	.	+	.	source_transcript=hg002_chrY_paternal_6.2;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.2,hg002_chrY_paternal_6.2;transcript_id=HG03009_ch_T0000015;gene_id=HG03009_ch_G0000006;Parent=HG03009_ch_T0000015;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:HG03009_ch_T0000015:2;Name=LOC102724521;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	243148	244676	.	+	.	source_transcript=hg002_chrY_paternal_6.2;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.2,hg002_chrY_paternal_6.2;transcript_id=HG03009_ch_T0000015;gene_id=HG03009_ch_G0000006;Parent=HG03009_ch_T0000015;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=intron:HG03009_ch_T0000015:2;Name=LOC102724521;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	244677	244843	.	+	.	source_transcript=hg002_chrY_paternal_6.2;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.2,hg002_chrY_paternal_6.2;transcript_id=HG03009_ch_T0000015;gene_id=HG03009_ch_G0000006;Parent=HG03009_ch_T0000015;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:HG03009_ch_T0000015:3;Name=LOC102724521;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	244844	248301	.	+	.	source_transcript=hg002_chrY_paternal_6.2;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.2,hg002_chrY_paternal_6.2;transcript_id=HG03009_ch_T0000015;gene_id=HG03009_ch_G0000006;Parent=HG03009_ch_T0000015;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=intron:HG03009_ch_T0000015:3;Name=LOC102724521;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	248302	248389	.	+	.	source_transcript=hg002_chrY_paternal_6.2;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.2,hg002_chrY_paternal_6.2;transcript_id=HG03009_ch_T0000015;gene_id=HG03009_ch_G0000006;Parent=HG03009_ch_T0000015;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:HG03009_ch_T0000015:4;Name=LOC102724521;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	248390	249099	.	+	.	source_transcript=hg002_chrY_paternal_6.2;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.2,hg002_chrY_paternal_6.2;transcript_id=HG03009_ch_T0000015;gene_id=HG03009_ch_G0000006;Parent=HG03009_ch_T0000015;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=intron:HG03009_ch_T0000015:4;Name=LOC102724521;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	249100	249784	.	+	.	source_transcript=hg002_chrY_paternal_6.2;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.2,hg002_chrY_paternal_6.2;transcript_id=HG03009_ch_T0000015;gene_id=HG03009_ch_G0000006;Parent=HG03009_ch_T0000015;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:HG03009_ch_T0000015:5;Name=LOC102724521;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	438185	472828	.	+	.	source_gene_common_name=SHOX;source_gene=hg002_chrY_paternal_9;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;gene_id=HG03009_ch_G0000007;gene_biotype=protein_coding;gene_name=SHOX;gene_sources=liftoff,augTM;ID=HG03009_ch_G0000007;Name=SHOX
HG03009_chrY	CAT	transcript	438185	472828	100	+	.	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000016;gene_id=HG03009_ch_G0000007;Parent=HG03009_ch_G0000007;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=HG03009_ch_T0000016;Name=SHOX
HG03009_chrY	CAT	exon	438185	438445	.	+	.	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000016;gene_id=HG03009_ch_G0000007;Parent=HG03009_ch_T0000016;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=exon:HG03009_ch_T0000016:0;Name=SHOX;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	438446	444222	.	+	.	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000016;gene_id=HG03009_ch_G0000007;Parent=HG03009_ch_T0000016;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=intron:HG03009_ch_T0000016:0;Name=SHOX;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	444223	444931	.	+	.	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000016;gene_id=HG03009_ch_G0000007;Parent=HG03009_ch_T0000016;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=exon:HG03009_ch_T0000016:1;Name=SHOX;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	444655	444931	.	+	0	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000016;gene_id=HG03009_ch_G0000007;Parent=HG03009_ch_T0000016;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=CDS:HG03009_ch_T0000016:0;Name=SHOX;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	444655	444657	.	+	0	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000016;gene_id=HG03009_ch_G0000007;Parent=HG03009_ch_T0000016;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=start_codon:HG03009_ch_T0000016;Name=SHOX;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	444932	448378	.	+	.	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000016;gene_id=HG03009_ch_G0000007;Parent=HG03009_ch_T0000016;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=intron:HG03009_ch_T0000016:1;Name=SHOX;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	448379	448587	.	+	.	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000016;gene_id=HG03009_ch_G0000007;Parent=HG03009_ch_T0000016;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=exon:HG03009_ch_T0000016:2;Name=SHOX;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	448379	448587	.	+	2	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000016;gene_id=HG03009_ch_G0000007;Parent=HG03009_ch_T0000016;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=CDS:HG03009_ch_T0000016:1;Name=SHOX;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	448588	454412	.	+	.	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000016;gene_id=HG03009_ch_G0000007;Parent=HG03009_ch_T0000016;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=intron:HG03009_ch_T0000016:2;Name=SHOX;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	454413	454470	.	+	.	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000016;gene_id=HG03009_ch_G0000007;Parent=HG03009_ch_T0000016;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=exon:HG03009_ch_T0000016:3;Name=SHOX;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	454413	454470	.	+	0	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000016;gene_id=HG03009_ch_G0000007;Parent=HG03009_ch_T0000016;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=CDS:HG03009_ch_T0000016:2;Name=SHOX;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	454471	454590	.	+	.	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000016;gene_id=HG03009_ch_G0000007;Parent=HG03009_ch_T0000016;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=intron:HG03009_ch_T0000016:3;Name=SHOX;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	454591	454679	.	+	.	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000016;gene_id=HG03009_ch_G0000007;Parent=HG03009_ch_T0000016;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=exon:HG03009_ch_T0000016:4;Name=SHOX;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	454591	454679	.	+	2	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000016;gene_id=HG03009_ch_G0000007;Parent=HG03009_ch_T0000016;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=CDS:HG03009_ch_T0000016:3;Name=SHOX;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	454680	472201	.	+	.	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000016;gene_id=HG03009_ch_G0000007;Parent=HG03009_ch_T0000016;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=intron:HG03009_ch_T0000016:4;Name=SHOX;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	472202	472828	.	+	.	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000016;gene_id=HG03009_ch_G0000007;Parent=HG03009_ch_T0000016;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=exon:HG03009_ch_T0000016:5;Name=SHOX;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	472202	472246	.	+	0	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000016;gene_id=HG03009_ch_G0000007;Parent=HG03009_ch_T0000016;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=CDS:HG03009_ch_T0000016:4;Name=SHOX;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	472244	472246	.	+	0	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000016;gene_id=HG03009_ch_G0000007;Parent=HG03009_ch_T0000016;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=stop_codon:HG03009_ch_T0000016;Name=SHOX;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	444548	464847	100	+	.	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.2,hg002_chrY_paternal_9.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000017;gene_id=HG03009_ch_G0000007;Parent=HG03009_ch_G0000007;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=HG03009_ch_T0000017;Name=SHOX
HG03009_chrY	CAT	exon	444548	444931	.	+	.	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.2,hg002_chrY_paternal_9.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000017;gene_id=HG03009_ch_G0000007;Parent=HG03009_ch_T0000017;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=exon:HG03009_ch_T0000017:0;Name=SHOX;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	444655	444931	.	+	0	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.2,hg002_chrY_paternal_9.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000017;gene_id=HG03009_ch_G0000007;Parent=HG03009_ch_T0000017;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=CDS:HG03009_ch_T0000017:0;Name=SHOX;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	444655	444657	.	+	0	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.2,hg002_chrY_paternal_9.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000017;gene_id=HG03009_ch_G0000007;Parent=HG03009_ch_T0000017;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=start_codon:HG03009_ch_T0000017;Name=SHOX;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	444932	448378	.	+	.	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.2,hg002_chrY_paternal_9.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000017;gene_id=HG03009_ch_G0000007;Parent=HG03009_ch_T0000017;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=intron:HG03009_ch_T0000017:0;Name=SHOX;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	448379	448587	.	+	.	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.2,hg002_chrY_paternal_9.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000017;gene_id=HG03009_ch_G0000007;Parent=HG03009_ch_T0000017;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=exon:HG03009_ch_T0000017:1;Name=SHOX;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	448379	448587	.	+	2	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.2,hg002_chrY_paternal_9.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000017;gene_id=HG03009_ch_G0000007;Parent=HG03009_ch_T0000017;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=CDS:HG03009_ch_T0000017:1;Name=SHOX;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	448588	454412	.	+	.	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.2,hg002_chrY_paternal_9.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000017;gene_id=HG03009_ch_G0000007;Parent=HG03009_ch_T0000017;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=intron:HG03009_ch_T0000017:1;Name=SHOX;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	454413	454470	.	+	.	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.2,hg002_chrY_paternal_9.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000017;gene_id=HG03009_ch_G0000007;Parent=HG03009_ch_T0000017;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=exon:HG03009_ch_T0000017:2;Name=SHOX;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	454413	454470	.	+	0	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.2,hg002_chrY_paternal_9.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000017;gene_id=HG03009_ch_G0000007;Parent=HG03009_ch_T0000017;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=CDS:HG03009_ch_T0000017:2;Name=SHOX;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	454471	454590	.	+	.	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.2,hg002_chrY_paternal_9.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000017;gene_id=HG03009_ch_G0000007;Parent=HG03009_ch_T0000017;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=intron:HG03009_ch_T0000017:2;Name=SHOX;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	454591	454679	.	+	.	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.2,hg002_chrY_paternal_9.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000017;gene_id=HG03009_ch_G0000007;Parent=HG03009_ch_T0000017;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=exon:HG03009_ch_T0000017:3;Name=SHOX;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	454591	454679	.	+	2	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.2,hg002_chrY_paternal_9.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000017;gene_id=HG03009_ch_G0000007;Parent=HG03009_ch_T0000017;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=CDS:HG03009_ch_T0000017:3;Name=SHOX;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	454680	457980	.	+	.	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.2,hg002_chrY_paternal_9.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000017;gene_id=HG03009_ch_G0000007;Parent=HG03009_ch_T0000017;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=intron:HG03009_ch_T0000017:3;Name=SHOX;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	457981	464847	.	+	.	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.2,hg002_chrY_paternal_9.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000017;gene_id=HG03009_ch_G0000007;Parent=HG03009_ch_T0000017;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=exon:HG03009_ch_T0000017:4;Name=SHOX;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	457981	458226	.	+	0	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.2,hg002_chrY_paternal_9.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000017;gene_id=HG03009_ch_G0000007;Parent=HG03009_ch_T0000017;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=CDS:HG03009_ch_T0000017:4;Name=SHOX;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	458224	458226	.	+	0	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.2,hg002_chrY_paternal_9.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000017;gene_id=HG03009_ch_G0000007;Parent=HG03009_ch_T0000017;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=stop_codon:HG03009_ch_T0000017;Name=SHOX;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	1011738	1034419	.	-	.	source_gene_common_name=CRLF2;source_gene=hg002_chrY_paternal_13;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;gene_id=HG03009_ch_G0000008;gene_biotype=protein_coding;gene_name=CRLF2;gene_sources=liftoff,augTM;ID=HG03009_ch_G0000008;Name=CRLF2
HG03009_chrY	CAT	transcript	1011738	1034419	100	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000018;gene_id=HG03009_ch_G0000008;Parent=HG03009_ch_G0000008;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=HG03009_ch_T0000018;Name=CRLF2
HG03009_chrY	CAT	exon	1011738	1012408	.	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000018;gene_id=HG03009_ch_G0000008;Parent=HG03009_ch_T0000018;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG03009_ch_T0000018:0;Name=CRLF2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1012145	1012408	.	-	0	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000018;gene_id=HG03009_ch_G0000008;Parent=HG03009_ch_T0000018;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG03009_ch_T0000018:0;Name=CRLF2;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	1012145	1012147	.	-	0	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000018;gene_id=HG03009_ch_G0000008;Parent=HG03009_ch_T0000018;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=stop_codon:HG03009_ch_T0000018;Name=CRLF2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1012409	1014461	.	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000018;gene_id=HG03009_ch_G0000008;Parent=HG03009_ch_T0000018;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG03009_ch_T0000018:0;Name=CRLF2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1014462	1014546	.	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000018;gene_id=HG03009_ch_G0000008;Parent=HG03009_ch_T0000018;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG03009_ch_T0000018:1;Name=CRLF2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1014462	1014546	.	-	1	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000018;gene_id=HG03009_ch_G0000008;Parent=HG03009_ch_T0000018;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG03009_ch_T0000018:1;Name=CRLF2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1014547	1018030	.	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000018;gene_id=HG03009_ch_G0000008;Parent=HG03009_ch_T0000018;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG03009_ch_T0000018:1;Name=CRLF2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1018031	1018151	.	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000018;gene_id=HG03009_ch_G0000008;Parent=HG03009_ch_T0000018;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG03009_ch_T0000018:2;Name=CRLF2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1018031	1018151	.	-	2	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000018;gene_id=HG03009_ch_G0000008;Parent=HG03009_ch_T0000018;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG03009_ch_T0000018:2;Name=CRLF2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1018152	1020308	.	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000018;gene_id=HG03009_ch_G0000008;Parent=HG03009_ch_T0000018;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG03009_ch_T0000018:2;Name=CRLF2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1020309	1020471	.	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000018;gene_id=HG03009_ch_G0000008;Parent=HG03009_ch_T0000018;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG03009_ch_T0000018:3;Name=CRLF2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1020309	1020471	.	-	0	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000018;gene_id=HG03009_ch_G0000008;Parent=HG03009_ch_T0000018;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG03009_ch_T0000018:3;Name=CRLF2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1020472	1024147	.	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000018;gene_id=HG03009_ch_G0000008;Parent=HG03009_ch_T0000018;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG03009_ch_T0000018:3;Name=CRLF2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1024148	1024281	.	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000018;gene_id=HG03009_ch_G0000008;Parent=HG03009_ch_T0000018;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG03009_ch_T0000018:4;Name=CRLF2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1024148	1024281	.	-	2	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000018;gene_id=HG03009_ch_G0000008;Parent=HG03009_ch_T0000018;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG03009_ch_T0000018:4;Name=CRLF2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1024282	1028199	.	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000018;gene_id=HG03009_ch_G0000008;Parent=HG03009_ch_T0000018;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG03009_ch_T0000018:4;Name=CRLF2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1028200	1028366	.	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000018;gene_id=HG03009_ch_G0000008;Parent=HG03009_ch_T0000018;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG03009_ch_T0000018:5;Name=CRLF2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1028200	1028212	.	-	0	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000018;gene_id=HG03009_ch_G0000008;Parent=HG03009_ch_T0000018;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG03009_ch_T0000018:5;Name=CRLF2;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	1028210	1028212	.	-	0	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000018;gene_id=HG03009_ch_G0000008;Parent=HG03009_ch_T0000018;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=start_codon:HG03009_ch_T0000018;Name=CRLF2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1028367	1034325	.	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000018;gene_id=HG03009_ch_G0000008;Parent=HG03009_ch_T0000018;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG03009_ch_T0000018:5;Name=CRLF2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1034326	1034419	.	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000018;gene_id=HG03009_ch_G0000008;Parent=HG03009_ch_T0000018;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG03009_ch_T0000018:6;Name=CRLF2;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	1011738	1034419	100	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000019;gene_id=HG03009_ch_G0000008;Parent=HG03009_ch_G0000008;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=HG03009_ch_T0000019;Name=CRLF2
HG03009_chrY	CAT	exon	1011738	1012408	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000019;gene_id=HG03009_ch_G0000008;Parent=HG03009_ch_T0000019;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG03009_ch_T0000019:0;Name=CRLF2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1012145	1012408	.	-	0	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000019;gene_id=HG03009_ch_G0000008;Parent=HG03009_ch_T0000019;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG03009_ch_T0000019:0;Name=CRLF2;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	1012145	1012147	.	-	0	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000019;gene_id=HG03009_ch_G0000008;Parent=HG03009_ch_T0000019;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=stop_codon:HG03009_ch_T0000019;Name=CRLF2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1012409	1014461	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000019;gene_id=HG03009_ch_G0000008;Parent=HG03009_ch_T0000019;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG03009_ch_T0000019:0;Name=CRLF2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1014462	1014546	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000019;gene_id=HG03009_ch_G0000008;Parent=HG03009_ch_T0000019;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG03009_ch_T0000019:1;Name=CRLF2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1014462	1014546	.	-	1	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000019;gene_id=HG03009_ch_G0000008;Parent=HG03009_ch_T0000019;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG03009_ch_T0000019:1;Name=CRLF2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1014547	1018030	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000019;gene_id=HG03009_ch_G0000008;Parent=HG03009_ch_T0000019;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG03009_ch_T0000019:1;Name=CRLF2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1018031	1018151	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000019;gene_id=HG03009_ch_G0000008;Parent=HG03009_ch_T0000019;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG03009_ch_T0000019:2;Name=CRLF2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1018031	1018151	.	-	2	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000019;gene_id=HG03009_ch_G0000008;Parent=HG03009_ch_T0000019;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG03009_ch_T0000019:2;Name=CRLF2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1018152	1020308	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000019;gene_id=HG03009_ch_G0000008;Parent=HG03009_ch_T0000019;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG03009_ch_T0000019:2;Name=CRLF2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1020309	1020471	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000019;gene_id=HG03009_ch_G0000008;Parent=HG03009_ch_T0000019;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG03009_ch_T0000019:3;Name=CRLF2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1020309	1020471	.	-	0	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000019;gene_id=HG03009_ch_G0000008;Parent=HG03009_ch_T0000019;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG03009_ch_T0000019:3;Name=CRLF2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1020472	1024147	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000019;gene_id=HG03009_ch_G0000008;Parent=HG03009_ch_T0000019;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG03009_ch_T0000019:3;Name=CRLF2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1024148	1024281	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000019;gene_id=HG03009_ch_G0000008;Parent=HG03009_ch_T0000019;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG03009_ch_T0000019:4;Name=CRLF2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1024148	1024281	.	-	2	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000019;gene_id=HG03009_ch_G0000008;Parent=HG03009_ch_T0000019;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG03009_ch_T0000019:4;Name=CRLF2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1024282	1028199	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000019;gene_id=HG03009_ch_G0000008;Parent=HG03009_ch_T0000019;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG03009_ch_T0000019:4;Name=CRLF2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1028200	1028366	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000019;gene_id=HG03009_ch_G0000008;Parent=HG03009_ch_T0000019;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG03009_ch_T0000019:5;Name=CRLF2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1028200	1028366	.	-	1	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000019;gene_id=HG03009_ch_G0000008;Parent=HG03009_ch_T0000019;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG03009_ch_T0000019:5;Name=CRLF2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1028367	1030572	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000019;gene_id=HG03009_ch_G0000008;Parent=HG03009_ch_T0000019;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG03009_ch_T0000019:5;Name=CRLF2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1030573	1030675	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000019;gene_id=HG03009_ch_G0000008;Parent=HG03009_ch_T0000019;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG03009_ch_T0000019:6;Name=CRLF2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1030573	1030675	.	-	2	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000019;gene_id=HG03009_ch_G0000008;Parent=HG03009_ch_T0000019;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG03009_ch_T0000019:6;Name=CRLF2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1030676	1034325	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000019;gene_id=HG03009_ch_G0000008;Parent=HG03009_ch_T0000019;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG03009_ch_T0000019:6;Name=CRLF2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1034326	1034419	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000019;gene_id=HG03009_ch_G0000008;Parent=HG03009_ch_T0000019;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG03009_ch_T0000019:7;Name=CRLF2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1034326	1034404	.	-	0	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000019;gene_id=HG03009_ch_G0000008;Parent=HG03009_ch_T0000019;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG03009_ch_T0000019:7;Name=CRLF2;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	1034402	1034404	.	-	0	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000019;gene_id=HG03009_ch_G0000008;Parent=HG03009_ch_T0000019;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=start_codon:HG03009_ch_T0000019;Name=CRLF2;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	1011738	1034419	100	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000020;gene_id=HG03009_ch_G0000008;Parent=HG03009_ch_G0000008;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=HG03009_ch_T0000020;Name=CRLF2
HG03009_chrY	CAT	exon	1011738	1012408	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000020;gene_id=HG03009_ch_G0000008;Parent=HG03009_ch_T0000020;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG03009_ch_T0000020:0;Name=CRLF2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1012145	1012408	.	-	0	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000020;gene_id=HG03009_ch_G0000008;Parent=HG03009_ch_T0000020;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG03009_ch_T0000020:0;Name=CRLF2;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	1012145	1012147	.	-	0	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000020;gene_id=HG03009_ch_G0000008;Parent=HG03009_ch_T0000020;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=stop_codon:HG03009_ch_T0000020;Name=CRLF2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1012409	1014461	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000020;gene_id=HG03009_ch_G0000008;Parent=HG03009_ch_T0000020;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG03009_ch_T0000020:0;Name=CRLF2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1014462	1014546	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000020;gene_id=HG03009_ch_G0000008;Parent=HG03009_ch_T0000020;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG03009_ch_T0000020:1;Name=CRLF2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1014462	1014546	.	-	1	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000020;gene_id=HG03009_ch_G0000008;Parent=HG03009_ch_T0000020;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG03009_ch_T0000020:1;Name=CRLF2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1014547	1018030	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000020;gene_id=HG03009_ch_G0000008;Parent=HG03009_ch_T0000020;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG03009_ch_T0000020:1;Name=CRLF2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1018031	1018151	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000020;gene_id=HG03009_ch_G0000008;Parent=HG03009_ch_T0000020;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG03009_ch_T0000020:2;Name=CRLF2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1018031	1018151	.	-	2	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000020;gene_id=HG03009_ch_G0000008;Parent=HG03009_ch_T0000020;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG03009_ch_T0000020:2;Name=CRLF2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1018152	1020308	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000020;gene_id=HG03009_ch_G0000008;Parent=HG03009_ch_T0000020;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG03009_ch_T0000020:2;Name=CRLF2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1020309	1020471	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000020;gene_id=HG03009_ch_G0000008;Parent=HG03009_ch_T0000020;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG03009_ch_T0000020:3;Name=CRLF2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1020309	1020471	.	-	0	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000020;gene_id=HG03009_ch_G0000008;Parent=HG03009_ch_T0000020;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG03009_ch_T0000020:3;Name=CRLF2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1020472	1024147	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000020;gene_id=HG03009_ch_G0000008;Parent=HG03009_ch_T0000020;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG03009_ch_T0000020:3;Name=CRLF2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1024148	1024281	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000020;gene_id=HG03009_ch_G0000008;Parent=HG03009_ch_T0000020;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG03009_ch_T0000020:4;Name=CRLF2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1024148	1024281	.	-	2	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000020;gene_id=HG03009_ch_G0000008;Parent=HG03009_ch_T0000020;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG03009_ch_T0000020:4;Name=CRLF2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1024282	1028199	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000020;gene_id=HG03009_ch_G0000008;Parent=HG03009_ch_T0000020;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG03009_ch_T0000020:4;Name=CRLF2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1028200	1028366	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000020;gene_id=HG03009_ch_G0000008;Parent=HG03009_ch_T0000020;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG03009_ch_T0000020:5;Name=CRLF2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1028200	1028366	.	-	1	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000020;gene_id=HG03009_ch_G0000008;Parent=HG03009_ch_T0000020;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG03009_ch_T0000020:5;Name=CRLF2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1028367	1030572	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000020;gene_id=HG03009_ch_G0000008;Parent=HG03009_ch_T0000020;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG03009_ch_T0000020:5;Name=CRLF2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1030573	1030672	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000020;gene_id=HG03009_ch_G0000008;Parent=HG03009_ch_T0000020;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG03009_ch_T0000020:6;Name=CRLF2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1030573	1030672	.	-	2	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000020;gene_id=HG03009_ch_G0000008;Parent=HG03009_ch_T0000020;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG03009_ch_T0000020:6;Name=CRLF2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1030673	1034325	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000020;gene_id=HG03009_ch_G0000008;Parent=HG03009_ch_T0000020;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG03009_ch_T0000020:6;Name=CRLF2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1034326	1034419	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000020;gene_id=HG03009_ch_G0000008;Parent=HG03009_ch_T0000020;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG03009_ch_T0000020:7;Name=CRLF2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1034326	1034404	.	-	0	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000020;gene_id=HG03009_ch_G0000008;Parent=HG03009_ch_T0000020;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG03009_ch_T0000020:7;Name=CRLF2;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	1034402	1034404	.	-	0	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000020;gene_id=HG03009_ch_G0000008;Parent=HG03009_ch_T0000020;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=start_codon:HG03009_ch_T0000020;Name=CRLF2;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	1011738	1034419	1000	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000021;gene_id=HG03009_ch_G0000008;Parent=HG03009_ch_G0000008;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=HG03009_ch_T0000021;Name=CRLF2
HG03009_chrY	CAT	exon	1011738	1012408	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000021;gene_id=HG03009_ch_G0000008;Parent=HG03009_ch_T0000021;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=exon:HG03009_ch_T0000021:0;Name=CRLF2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1012409	1014461	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000021;gene_id=HG03009_ch_G0000008;Parent=HG03009_ch_T0000021;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=intron:HG03009_ch_T0000021:0;Name=CRLF2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1014462	1014546	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000021;gene_id=HG03009_ch_G0000008;Parent=HG03009_ch_T0000021;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=exon:HG03009_ch_T0000021:1;Name=CRLF2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1014547	1018030	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000021;gene_id=HG03009_ch_G0000008;Parent=HG03009_ch_T0000021;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=intron:HG03009_ch_T0000021:1;Name=CRLF2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1018031	1018151	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000021;gene_id=HG03009_ch_G0000008;Parent=HG03009_ch_T0000021;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=exon:HG03009_ch_T0000021:2;Name=CRLF2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1018152	1020553	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000021;gene_id=HG03009_ch_G0000008;Parent=HG03009_ch_T0000021;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=intron:HG03009_ch_T0000021:2;Name=CRLF2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1020554	1020898	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000021;gene_id=HG03009_ch_G0000008;Parent=HG03009_ch_T0000021;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=exon:HG03009_ch_T0000021:3;Name=CRLF2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1020899	1024147	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000021;gene_id=HG03009_ch_G0000008;Parent=HG03009_ch_T0000021;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=intron:HG03009_ch_T0000021:3;Name=CRLF2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1024148	1024281	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000021;gene_id=HG03009_ch_G0000008;Parent=HG03009_ch_T0000021;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=exon:HG03009_ch_T0000021:4;Name=CRLF2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1024282	1028199	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000021;gene_id=HG03009_ch_G0000008;Parent=HG03009_ch_T0000021;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=intron:HG03009_ch_T0000021:4;Name=CRLF2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1028200	1028366	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000021;gene_id=HG03009_ch_G0000008;Parent=HG03009_ch_T0000021;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=exon:HG03009_ch_T0000021:5;Name=CRLF2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1028367	1030572	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000021;gene_id=HG03009_ch_G0000008;Parent=HG03009_ch_T0000021;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=intron:HG03009_ch_T0000021:5;Name=CRLF2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1030573	1030672	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000021;gene_id=HG03009_ch_G0000008;Parent=HG03009_ch_T0000021;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=exon:HG03009_ch_T0000021:6;Name=CRLF2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1030673	1034325	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000021;gene_id=HG03009_ch_G0000008;Parent=HG03009_ch_T0000021;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=intron:HG03009_ch_T0000021:6;Name=CRLF2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1034326	1034419	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000021;gene_id=HG03009_ch_G0000008;Parent=HG03009_ch_T0000021;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=exon:HG03009_ch_T0000021:7;Name=CRLF2;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	1090143	1147580	.	+	.	source_gene_common_name=CSF2RA;source_gene=hg002_chrY_paternal_14;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;gene_id=HG03009_ch_G0000009;gene_biotype=protein_coding;gene_name=CSF2RA;gene_sources=liftoff,augTM;ID=HG03009_ch_G0000009;Name=CSF2RA
HG03009_chrY	CAT	transcript	1090143	1129030	100	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000022;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03009_ch_T0000022;Name=CSF2RA
HG03009_chrY	CAT	exon	1090143	1090208	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000022;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000022:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1090209	1096082	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000022;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000022:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1096083	1096170	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000022;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000022:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1096171	1104052	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000022;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000022:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1104053	1104154	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000022;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000022:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1104079	1104154	.	+	0	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000022;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000022:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	1104079	1104081	.	+	0	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000022;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03009_ch_T0000022;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1104155	1107146	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000022;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000022:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1107147	1107289	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000022;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000022:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1107147	1107289	.	+	2	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000022;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000022:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1107290	1109886	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000022;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000022:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1109887	1110010	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000022;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000022:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1109887	1110010	.	+	0	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000022;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000022:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1110011	1110126	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000022;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000022:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1110127	1110256	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000022;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000022:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1110127	1110256	.	+	2	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000022;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000022:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1110257	1111702	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000022;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000022:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1111703	1111875	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000022;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000022:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1111703	1111875	.	+	1	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000022;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000022:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1111876	1115991	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000022;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000022:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1115992	1116125	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000022;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000022:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1115992	1116125	.	+	2	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000022;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000022:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1116126	1117090	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000022;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000022:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1117091	1117120	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000022;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000022:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1117091	1117120	.	+	0	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000022;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000022:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1117121	1123237	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000022;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000022:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1123238	1123373	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000022;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000022:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1123238	1123373	.	+	0	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000022;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000022:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1123374	1126671	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000022;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000022:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1126672	1126768	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000022;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000022:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1126672	1126768	.	+	2	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000022;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000022:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1126769	1128534	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000022;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000022:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1128535	1128616	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000022;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000022:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1128535	1128616	.	+	1	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000022;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000022:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1128617	1128716	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000022;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000022:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1128717	1129030	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000022;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000022:12;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1128717	1128824	.	+	0	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000022;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000022:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	1128822	1128824	.	+	0	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000022;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03009_ch_T0000022;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	1090143	1133185	100	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000023;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03009_ch_T0000023;Name=CSF2RA
HG03009_chrY	CAT	exon	1090143	1090208	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000023;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000023:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1090209	1104052	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000023;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000023:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1104053	1104154	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000023;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000023:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1104079	1104154	.	+	0	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000023;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000023:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	1104079	1104081	.	+	0	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000023;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03009_ch_T0000023;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1104155	1107146	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000023;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000023:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1107147	1107289	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000023;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000023:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1107147	1107289	.	+	2	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000023;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000023:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1107290	1109886	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000023;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000023:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1109887	1110010	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000023;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000023:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1109887	1110010	.	+	0	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000023;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000023:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1110011	1110126	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000023;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000023:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1110127	1110256	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000023;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000023:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1110127	1110256	.	+	2	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000023;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000023:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1110257	1111702	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000023;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000023:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1111703	1111875	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000023;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000023:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1111703	1111875	.	+	1	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000023;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000023:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1111876	1115991	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000023;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000023:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1115992	1116125	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000023;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000023:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1115992	1116125	.	+	2	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000023;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000023:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1116126	1117090	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000023;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000023:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1117091	1117120	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000023;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000023:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1117091	1117120	.	+	0	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000023;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000023:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1117121	1123237	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000023;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000023:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1123238	1123373	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000023;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000023:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1123238	1123373	.	+	0	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000023;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000023:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1123374	1126009	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000023;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000023:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1126010	1126111	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000023;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000023:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1126010	1126111	.	+	2	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000023;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000023:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1126112	1126671	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000023;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000023:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1126672	1126768	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000023;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000023:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1126672	1126768	.	+	2	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000023;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000023:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1126769	1128534	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000023;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000023:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1128535	1128616	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000023;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000023:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1128535	1128616	.	+	1	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000023;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000023:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1128617	1132651	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000023;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000023:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1132652	1133185	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000023;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000023:12;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1132652	1132729	.	+	0	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000023;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000023:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	1132727	1132729	.	+	0	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000023;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03009_ch_T0000023;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	1090143	1133185	100	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000024;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03009_ch_T0000024;Name=CSF2RA
HG03009_chrY	CAT	exon	1090143	1090208	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000024;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000024:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1090209	1096082	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000024;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000024:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1096083	1096170	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000024;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000024:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1096171	1104052	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000024;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000024:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1104053	1104154	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000024;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000024:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1104079	1104154	.	+	0	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000024;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000024:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	1104079	1104081	.	+	0	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000024;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03009_ch_T0000024;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1104155	1107146	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000024;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000024:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1107147	1107289	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000024;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000024:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1107147	1107289	.	+	2	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000024;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000024:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1107290	1109886	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000024;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000024:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1109887	1110010	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000024;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000024:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1109887	1110010	.	+	0	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000024;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000024:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1110011	1110126	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000024;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000024:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1110127	1110256	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000024;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000024:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1110127	1110256	.	+	2	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000024;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000024:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1110257	1111702	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000024;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000024:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1111703	1111875	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000024;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000024:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1111703	1111875	.	+	1	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000024;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000024:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1111876	1115991	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000024;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000024:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1115992	1116125	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000024;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000024:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1115992	1116125	.	+	2	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000024;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000024:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1116126	1117090	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000024;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000024:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1117091	1117120	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000024;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000024:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1117091	1117120	.	+	0	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000024;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000024:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1117121	1123237	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000024;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000024:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1123238	1123373	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000024;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000024:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1123238	1123373	.	+	0	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000024;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000024:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1123374	1126009	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000024;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000024:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1126010	1126111	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000024;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000024:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1126010	1126111	.	+	2	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000024;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000024:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1126112	1126671	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000024;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000024:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1126672	1126768	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000024;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000024:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1126672	1126768	.	+	2	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000024;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000024:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1126769	1128534	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000024;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000024:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1128535	1128616	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000024;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000024:12;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1128535	1128616	.	+	1	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000024;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000024:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1128617	1132651	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000024;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000024:12;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1132652	1133185	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000024;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000024:13;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1132652	1132729	.	+	0	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000024;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000024:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	1132727	1132729	.	+	0	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000024;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03009_ch_T0000024;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	1090143	1133185	100	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000025;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03009_ch_T0000025;Name=CSF2RA
HG03009_chrY	CAT	exon	1090143	1090208	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000025;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000025:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1090209	1104052	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000025;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000025:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1104053	1104154	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000025;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000025:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1104079	1104154	.	+	0	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000025;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000025:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	1104079	1104081	.	+	0	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000025;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03009_ch_T0000025;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1104155	1107146	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000025;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000025:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1107147	1107289	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000025;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000025:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1107147	1107289	.	+	2	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000025;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000025:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1107290	1109886	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000025;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000025:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1109887	1110010	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000025;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000025:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1109887	1110010	.	+	0	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000025;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000025:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1110011	1110126	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000025;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000025:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1110127	1110256	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000025;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000025:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1110127	1110256	.	+	2	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000025;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000025:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1110257	1111702	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000025;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000025:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1111703	1111875	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000025;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000025:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1111703	1111875	.	+	1	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000025;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000025:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1111876	1115991	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000025;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000025:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1115992	1116125	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000025;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000025:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1115992	1116125	.	+	2	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000025;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000025:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1116126	1117090	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000025;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000025:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1117091	1117120	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000025;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000025:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1117091	1117120	.	+	0	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000025;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000025:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1117121	1123237	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000025;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000025:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1123238	1123373	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000025;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000025:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1123238	1123373	.	+	0	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000025;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000025:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1123374	1126671	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000025;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000025:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1126672	1126768	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000025;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000025:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1126672	1126768	.	+	2	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000025;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000025:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1126769	1128534	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000025;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000025:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1128535	1128616	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000025;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000025:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1128535	1128616	.	+	1	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000025;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000025:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1128617	1132651	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000025;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000025:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1132652	1133185	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000025;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000025:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1132652	1132729	.	+	0	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000025;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000025:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	1132727	1132729	.	+	0	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000025;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03009_ch_T0000025;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	1090143	1133185	100	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000026;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03009_ch_T0000026;Name=CSF2RA
HG03009_chrY	CAT	exon	1090143	1090208	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000026;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000026:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1090209	1096092	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000026;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000026:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1096093	1096146	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000026;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000026:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1096147	1104052	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000026;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000026:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1104053	1104154	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000026;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000026:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1104079	1104154	.	+	0	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000026;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000026:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	1104079	1104081	.	+	0	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000026;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03009_ch_T0000026;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1104155	1107146	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000026;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000026:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1107147	1107289	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000026;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000026:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1107147	1107289	.	+	2	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000026;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000026:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1107290	1109886	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000026;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000026:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1109887	1110010	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000026;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000026:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1109887	1110010	.	+	0	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000026;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000026:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1110011	1110126	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000026;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000026:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1110127	1110256	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000026;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000026:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1110127	1110256	.	+	2	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000026;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000026:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1110257	1111702	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000026;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000026:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1111703	1111875	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000026;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000026:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1111703	1111875	.	+	1	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000026;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000026:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1111876	1115991	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000026;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000026:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1115992	1116125	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000026;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000026:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1115992	1116125	.	+	2	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000026;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000026:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1116126	1117090	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000026;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000026:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1117091	1117120	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000026;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000026:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1117091	1117120	.	+	0	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000026;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000026:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1117121	1123237	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000026;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000026:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1123238	1123373	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000026;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000026:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1123238	1123373	.	+	0	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000026;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000026:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1123374	1126671	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000026;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000026:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1126672	1126768	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000026;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000026:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1126672	1126768	.	+	2	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000026;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000026:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1126769	1128534	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000026;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000026:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1128535	1128616	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000026;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000026:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1128535	1128616	.	+	1	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000026;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000026:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1128617	1132651	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000026;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000026:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1132652	1133185	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000026;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000026:12;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1132652	1132729	.	+	0	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000026;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000026:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	1132727	1132729	.	+	0	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000026;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03009_ch_T0000026;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	1090143	1133185	100	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000027;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03009_ch_T0000027;Name=CSF2RA
HG03009_chrY	CAT	exon	1090143	1090208	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000027;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000027:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1090209	1096082	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000027;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000027:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1096083	1096146	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000027;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000027:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1096147	1104052	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000027;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000027:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1104053	1104154	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000027;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000027:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1104079	1104154	.	+	0	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000027;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000027:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	1104079	1104081	.	+	0	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000027;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03009_ch_T0000027;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1104155	1107146	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000027;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000027:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1107147	1107289	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000027;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000027:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1107147	1107289	.	+	2	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000027;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000027:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1107290	1109886	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000027;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000027:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1109887	1110010	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000027;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000027:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1109887	1110010	.	+	0	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000027;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000027:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1110011	1110126	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000027;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000027:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1110127	1110256	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000027;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000027:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1110127	1110256	.	+	2	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000027;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000027:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1110257	1111702	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000027;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000027:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1111703	1111875	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000027;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000027:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1111703	1111875	.	+	1	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000027;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000027:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1111876	1115991	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000027;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000027:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1115992	1116125	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000027;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000027:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1115992	1116125	.	+	2	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000027;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000027:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1116126	1123237	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000027;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000027:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1123238	1123373	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000027;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000027:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1123238	1123373	.	+	0	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000027;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000027:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1123374	1126671	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000027;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000027:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1126672	1126768	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000027;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000027:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1126672	1126768	.	+	2	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000027;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000027:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1126769	1128534	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000027;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000027:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1128535	1128616	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000027;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000027:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1128535	1128616	.	+	1	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000027;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000027:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1128617	1132651	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000027;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000027:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1132652	1133185	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000027;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000027:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1132652	1132729	.	+	0	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000027;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000027:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	1132727	1132729	.	+	0	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000027;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03009_ch_T0000027;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	1090143	1133185	100	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000028;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03009_ch_T0000028;Name=CSF2RA
HG03009_chrY	CAT	exon	1090143	1090208	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000028;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000028:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1090209	1096082	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000028;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000028:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1096083	1096146	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000028;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000028:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1096147	1104052	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000028;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000028:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1104053	1104154	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000028;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000028:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1104079	1104154	.	+	0	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000028;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000028:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	1104079	1104081	.	+	0	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000028;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03009_ch_T0000028;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1104155	1107146	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000028;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000028:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1107147	1107289	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000028;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000028:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1107147	1107289	.	+	2	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000028;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000028:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1107290	1109886	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000028;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000028:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1109887	1110010	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000028;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000028:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1109887	1110010	.	+	0	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000028;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000028:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1110011	1110126	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000028;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000028:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1110127	1110256	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000028;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000028:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1110127	1110256	.	+	2	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000028;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000028:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1110257	1111702	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000028;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000028:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1111703	1111875	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000028;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000028:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1111703	1111875	.	+	1	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000028;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000028:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1111876	1116010	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000028;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000028:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1116011	1116125	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000028;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000028:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1116011	1116125	.	+	2	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000028;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000028:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1116126	1117090	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000028;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000028:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1117091	1117120	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000028;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000028:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1117091	1117120	.	+	1	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000028;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000028:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1117121	1121749	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000028;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000028:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1121750	1121812	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000028;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000028:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1121750	1121812	.	+	1	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000028;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000028:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1121813	1128534	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000028;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000028:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1128535	1128616	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000028;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000028:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1128535	1128616	.	+	1	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000028;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000028:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1128617	1132651	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000028;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000028:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1132652	1133185	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000028;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000028:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1132652	1132729	.	+	0	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000028;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000028:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	1132727	1132729	.	+	0	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000028;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03009_ch_T0000028;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	1090143	1133185	100	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000029;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03009_ch_T0000029;Name=CSF2RA
HG03009_chrY	CAT	exon	1090143	1090208	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000029;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000029:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1090209	1094168	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000029;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000029:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1094169	1094290	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000029;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000029:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1094291	1096082	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000029;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000029:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1096083	1096170	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000029;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000029:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1096171	1104052	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000029;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000029:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1104053	1104154	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000029;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000029:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1104079	1104154	.	+	0	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000029;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000029:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	1104079	1104081	.	+	0	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000029;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03009_ch_T0000029;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1104155	1107146	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000029;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000029:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1107147	1107289	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000029;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000029:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1107147	1107289	.	+	2	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000029;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000029:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1107290	1109886	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000029;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000029:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1109887	1110010	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000029;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000029:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1109887	1110010	.	+	0	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000029;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000029:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1110011	1110126	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000029;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000029:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1110127	1110256	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000029;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000029:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1110127	1110256	.	+	2	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000029;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000029:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1110257	1111702	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000029;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000029:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1111703	1111875	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000029;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000029:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1111703	1111875	.	+	1	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000029;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000029:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1111876	1115991	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000029;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000029:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1115992	1116125	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000029;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000029:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1115992	1116125	.	+	2	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000029;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000029:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1116126	1117090	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000029;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000029:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1117091	1117120	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000029;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000029:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1117091	1117120	.	+	0	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000029;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000029:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1117121	1123237	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000029;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000029:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1123238	1123373	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000029;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000029:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1123238	1123373	.	+	0	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000029;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000029:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1123374	1128534	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000029;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000029:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1128535	1128616	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000029;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000029:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1128535	1128590	.	+	2	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000029;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000029:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	1128588	1128590	.	+	0	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000029;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03009_ch_T0000029;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1128617	1132651	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000029;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000029:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1132652	1133185	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000029;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000029:12;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	1090143	1133185	100	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000030;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03009_ch_T0000030;Name=CSF2RA
HG03009_chrY	CAT	exon	1090143	1090208	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000030;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000030:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1090209	1104052	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000030;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000030:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1104053	1104154	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000030;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000030:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1104079	1104154	.	+	0	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000030;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000030:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	1104079	1104081	.	+	0	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000030;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03009_ch_T0000030;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1104155	1107146	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000030;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000030:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1107147	1107289	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000030;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000030:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1107147	1107289	.	+	2	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000030;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000030:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1107290	1109886	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000030;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000030:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1109887	1110010	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000030;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000030:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1109887	1110010	.	+	0	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000030;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000030:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1110011	1110126	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000030;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000030:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1110127	1110256	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000030;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000030:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1110127	1110256	.	+	2	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000030;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000030:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1110257	1111702	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000030;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000030:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1111703	1111875	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000030;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000030:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1111703	1111875	.	+	1	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000030;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000030:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1111876	1115991	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000030;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000030:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1115992	1116125	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000030;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000030:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1115992	1116125	.	+	2	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000030;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000030:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1116126	1117090	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000030;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000030:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1117091	1117120	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000030;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000030:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1117091	1117120	.	+	0	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000030;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000030:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1117121	1123237	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000030;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000030:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1123238	1123373	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000030;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000030:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1123238	1123373	.	+	0	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000030;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000030:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1123374	1128534	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000030;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000030:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1128535	1128616	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000030;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000030:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1128535	1128590	.	+	2	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000030;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000030:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	1128588	1128590	.	+	0	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000030;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03009_ch_T0000030;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1128617	1132651	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000030;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000030:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1132652	1133185	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000030;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000030:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	1090143	1133185	100	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000031;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03009_ch_T0000031;Name=CSF2RA
HG03009_chrY	CAT	exon	1090143	1090208	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000031;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000031:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1090209	1096082	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000031;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000031:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1096083	1096170	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000031;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000031:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1096171	1104052	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000031;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000031:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1104053	1104154	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000031;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000031:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1104079	1104154	.	+	0	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000031;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000031:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	1104079	1104081	.	+	0	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000031;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03009_ch_T0000031;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1104155	1107146	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000031;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000031:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1107147	1107289	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000031;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000031:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1107147	1107289	.	+	2	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000031;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000031:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1107290	1109886	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000031;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000031:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1109887	1110010	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000031;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000031:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1109887	1110010	.	+	0	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000031;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000031:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1110011	1110126	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000031;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000031:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1110127	1110256	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000031;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000031:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1110127	1110256	.	+	2	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000031;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000031:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1110257	1111702	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000031;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000031:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1111703	1111875	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000031;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000031:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1111703	1111875	.	+	1	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000031;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000031:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1111876	1115991	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000031;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000031:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1115992	1116125	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000031;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000031:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1115992	1116125	.	+	2	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000031;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000031:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1116126	1117090	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000031;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000031:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1117091	1117120	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000031;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000031:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1117091	1117120	.	+	0	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000031;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000031:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1117121	1123237	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000031;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000031:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1123238	1123373	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000031;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000031:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1123238	1123373	.	+	0	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000031;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000031:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1123374	1128534	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000031;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000031:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1128535	1128616	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000031;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000031:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1128535	1128590	.	+	2	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000031;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000031:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	1128588	1128590	.	+	0	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000031;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03009_ch_T0000031;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1128617	1132651	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000031;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000031:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1132652	1133185	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000031;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000031:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	1090143	1133185	100	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000032;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03009_ch_T0000032;Name=CSF2RA
HG03009_chrY	CAT	exon	1090143	1090208	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000032;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000032:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1090209	1096082	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000032;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000032:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1096083	1096170	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000032;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000032:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1096171	1104052	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000032;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000032:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1104053	1104154	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000032;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000032:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1104079	1104154	.	+	0	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000032;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000032:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	1104079	1104081	.	+	0	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000032;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03009_ch_T0000032;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1104155	1107146	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000032;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000032:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1107147	1107289	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000032;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000032:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1107147	1107289	.	+	2	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000032;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000032:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1107290	1109886	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000032;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000032:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1109887	1110010	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000032;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000032:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1109887	1110010	.	+	0	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000032;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000032:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1110011	1110126	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000032;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000032:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1110127	1110256	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000032;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000032:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1110127	1110256	.	+	2	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000032;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000032:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1110257	1111702	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000032;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000032:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1111703	1111875	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000032;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000032:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1111703	1111875	.	+	1	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000032;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000032:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1111876	1115991	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000032;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000032:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1115992	1116125	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000032;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000032:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1115992	1116125	.	+	2	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000032;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000032:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1116126	1117090	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000032;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000032:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1117091	1117120	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000032;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000032:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1117091	1117120	.	+	0	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000032;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000032:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1117121	1123237	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000032;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000032:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1123238	1123373	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000032;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000032:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1123238	1123373	.	+	0	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000032;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000032:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1123374	1126671	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000032;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000032:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1126672	1126768	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000032;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000032:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1126672	1126768	.	+	2	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000032;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000032:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1126769	1128534	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000032;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000032:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1128535	1128616	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000032;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000032:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1128535	1128616	.	+	1	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000032;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000032:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1128617	1132651	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000032;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000032:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1132652	1133185	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000032;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000032:12;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1132652	1132729	.	+	0	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000032;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000032:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	1132727	1132729	.	+	0	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000032;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03009_ch_T0000032;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	1090143	1129030	100	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000033;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03009_ch_T0000033;Name=CSF2RA
HG03009_chrY	CAT	exon	1090143	1090208	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000033;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000033:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1090209	1096082	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000033;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000033:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1096083	1096146	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000033;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000033:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1096147	1104052	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000033;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000033:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1104053	1104154	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000033;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000033:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1104079	1104154	.	+	0	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000033;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000033:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	1104079	1104081	.	+	0	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000033;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03009_ch_T0000033;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1104155	1107146	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000033;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000033:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1107147	1107289	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000033;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000033:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1107147	1107289	.	+	2	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000033;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000033:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1107290	1109886	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000033;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000033:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1109887	1110010	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000033;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000033:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1109887	1110010	.	+	0	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000033;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000033:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1110011	1110126	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000033;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000033:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1110127	1110256	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000033;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000033:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1110127	1110256	.	+	2	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000033;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000033:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1110257	1111702	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000033;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000033:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1111703	1111875	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000033;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000033:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1111703	1111875	.	+	1	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000033;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000033:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1111876	1115991	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000033;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000033:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1115992	1116125	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000033;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000033:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1115992	1116125	.	+	2	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000033;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000033:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1116126	1117090	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000033;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000033:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1117091	1117120	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000033;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000033:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1117091	1117120	.	+	0	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000033;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000033:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1117121	1123237	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000033;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000033:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1123238	1123373	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000033;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000033:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1123238	1123373	.	+	0	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000033;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000033:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1123374	1126671	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000033;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000033:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1126672	1126768	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000033;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000033:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1126672	1126768	.	+	2	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000033;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000033:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1126769	1128534	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000033;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000033:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1128535	1128616	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000033;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000033:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1128535	1128616	.	+	1	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000033;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000033:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1128617	1128716	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000033;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000033:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1128717	1129030	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000033;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000033:12;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1128717	1128824	.	+	0	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000033;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000033:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	1128822	1128824	.	+	0	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000033;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03009_ch_T0000033;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	1090143	1133185	100	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000034;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03009_ch_T0000034;Name=CSF2RA
HG03009_chrY	CAT	exon	1090143	1090208	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000034;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000034:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1090209	1096082	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000034;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000034:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1096083	1096146	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000034;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000034:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1096147	1104052	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000034;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000034:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1104053	1104154	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000034;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000034:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1104079	1104154	.	+	0	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000034;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000034:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	1104079	1104081	.	+	0	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000034;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03009_ch_T0000034;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1104155	1107146	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000034;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000034:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1107147	1107289	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000034;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000034:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1107147	1107289	.	+	2	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000034;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000034:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1107290	1109886	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000034;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000034:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1109887	1110010	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000034;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000034:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1109887	1110010	.	+	0	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000034;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000034:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1110011	1110126	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000034;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000034:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1110127	1110256	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000034;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000034:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1110127	1110256	.	+	2	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000034;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000034:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1110257	1111702	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000034;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000034:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1111703	1111875	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000034;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000034:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1111703	1111875	.	+	1	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000034;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000034:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1111876	1115991	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000034;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000034:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1115992	1116125	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000034;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000034:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1115992	1116125	.	+	2	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000034;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000034:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1116126	1117090	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000034;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000034:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1117091	1117120	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000034;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000034:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1117091	1117120	.	+	0	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000034;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000034:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1117121	1123237	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000034;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000034:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1123238	1123373	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000034;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000034:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1123238	1123373	.	+	0	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000034;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000034:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1123374	1126671	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000034;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000034:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1126672	1126768	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000034;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000034:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1126672	1126768	.	+	2	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000034;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000034:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1126769	1128534	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000034;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000034:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1128535	1128616	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000034;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000034:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1128535	1128616	.	+	1	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000034;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000034:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1128617	1132651	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000034;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000034:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1132652	1133185	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000034;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000034:12;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1132652	1132729	.	+	0	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000034;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000034:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	1132727	1132729	.	+	0	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000034;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03009_ch_T0000034;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	1090143	1145006	100	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000035;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03009_ch_T0000035;Name=CSF2RA
HG03009_chrY	CAT	exon	1090143	1090208	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000035;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000035:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1090209	1104052	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000035;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000035:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1104053	1104154	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000035;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000035:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1104079	1104154	.	+	0	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000035;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000035:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	1104079	1104081	.	+	0	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000035;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03009_ch_T0000035;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1104155	1107146	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000035;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000035:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1107147	1107289	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000035;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000035:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1107147	1107289	.	+	2	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000035;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000035:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1107290	1109886	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000035;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000035:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1109887	1110010	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000035;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000035:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1109887	1110010	.	+	0	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000035;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000035:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1110011	1110126	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000035;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000035:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1110127	1110256	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000035;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000035:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1110127	1110256	.	+	2	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000035;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000035:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1110257	1111702	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000035;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000035:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1111703	1111875	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000035;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000035:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1111703	1111875	.	+	1	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000035;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000035:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1111876	1115991	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000035;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000035:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1115992	1116125	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000035;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000035:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1115992	1116125	.	+	2	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000035;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000035:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1116126	1117090	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000035;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000035:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1117091	1117120	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000035;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000035:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1117091	1117120	.	+	0	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000035;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000035:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1117121	1123237	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000035;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000035:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1123238	1123373	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000035;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000035:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1123238	1123373	.	+	0	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000035;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000035:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1123374	1126671	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000035;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000035:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1126672	1126768	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000035;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000035:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1126672	1126768	.	+	2	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000035;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000035:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1126769	1128534	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000035;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000035:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1128535	1128616	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000035;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000035:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1128535	1128616	.	+	1	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000035;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000035:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1128617	1144805	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000035;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000035:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1144806	1144824	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000035;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000035:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1144806	1144824	.	+	0	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000035;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000035:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1144825	1144912	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000035;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000035:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1144913	1145006	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000035;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000035:12;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1144913	1144929	.	+	2	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000035;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000035:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	1144927	1144929	.	+	0	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000035;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03009_ch_T0000035;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	1090143	1145183	100	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000036;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03009_ch_T0000036;Name=CSF2RA
HG03009_chrY	CAT	exon	1090143	1090208	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000036;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000036:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1090209	1104052	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000036;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000036:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1104053	1104154	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000036;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000036:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1104079	1104154	.	+	0	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000036;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000036:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	1104079	1104081	.	+	0	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000036;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03009_ch_T0000036;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1104155	1107146	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000036;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000036:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1107147	1107289	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000036;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000036:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1107147	1107289	.	+	2	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000036;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000036:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1107290	1109886	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000036;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000036:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1109887	1110010	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000036;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000036:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1109887	1110010	.	+	0	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000036;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000036:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1110011	1110126	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000036;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000036:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1110127	1110256	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000036;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000036:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1110127	1110256	.	+	2	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000036;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000036:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1110257	1111702	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000036;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000036:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1111703	1111875	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000036;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000036:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1111703	1111875	.	+	1	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000036;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000036:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1111876	1115991	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000036;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000036:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1115992	1116125	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000036;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000036:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1115992	1116125	.	+	2	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000036;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000036:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1116126	1117090	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000036;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000036:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1117091	1117120	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000036;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000036:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1117091	1117120	.	+	0	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000036;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000036:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1117121	1123237	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000036;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000036:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1123238	1123373	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000036;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000036:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1123238	1123373	.	+	0	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000036;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000036:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1123374	1126671	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000036;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000036:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1126672	1126768	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000036;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000036:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1126672	1126768	.	+	2	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000036;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000036:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1126769	1128534	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000036;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000036:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1128535	1128616	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000036;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000036:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1128535	1128616	.	+	1	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000036;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000036:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1128617	1144801	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000036;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000036:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1144802	1144824	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000036;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000036:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1144802	1144824	.	+	0	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000036;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000036:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1144825	1144912	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000036;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000036:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1144913	1145183	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000036;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000036:12;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1144913	1145051	.	+	1	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000036;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000036:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	1145049	1145051	.	+	0	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000036;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03009_ch_T0000036;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	1090143	1145183	100	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000037;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03009_ch_T0000037;Name=CSF2RA
HG03009_chrY	CAT	exon	1090143	1090208	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000037;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000037:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1090209	1096082	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000037;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000037:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1096083	1096170	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000037;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000037:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1096171	1104052	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000037;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000037:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1104053	1104154	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000037;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000037:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1104079	1104154	.	+	0	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000037;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000037:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	1104079	1104081	.	+	0	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000037;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03009_ch_T0000037;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1104155	1107146	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000037;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000037:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1107147	1107289	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000037;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000037:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1107147	1107289	.	+	2	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000037;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000037:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1107290	1109886	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000037;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000037:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1109887	1110010	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000037;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000037:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1109887	1110010	.	+	0	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000037;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000037:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1110011	1110126	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000037;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000037:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1110127	1110256	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000037;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000037:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1110127	1110256	.	+	2	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000037;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000037:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1110257	1111702	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000037;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000037:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1111703	1111875	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000037;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000037:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1111703	1111875	.	+	1	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000037;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000037:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1111876	1115991	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000037;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000037:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1115992	1116125	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000037;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000037:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1115992	1116125	.	+	2	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000037;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000037:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1116126	1117090	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000037;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000037:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1117091	1117120	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000037;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000037:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1117091	1117120	.	+	0	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000037;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000037:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1117121	1123237	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000037;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000037:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1123238	1123373	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000037;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000037:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1123238	1123373	.	+	0	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000037;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000037:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1123374	1126671	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000037;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000037:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1126672	1126768	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000037;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000037:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1126672	1126768	.	+	2	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000037;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000037:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1126769	1128534	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000037;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000037:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1128535	1128616	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000037;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000037:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1128535	1128616	.	+	1	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000037;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000037:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1128617	1144801	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000037;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000037:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1144802	1144824	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000037;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000037:12;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1144802	1144824	.	+	0	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000037;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000037:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1144825	1144912	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000037;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000037:12;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1144913	1145183	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000037;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000037:13;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1144913	1145051	.	+	1	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000037;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000037:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	1145049	1145051	.	+	0	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000037;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03009_ch_T0000037;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	1090143	1145183	100	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000038;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03009_ch_T0000038;Name=CSF2RA
HG03009_chrY	CAT	exon	1090143	1090208	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000038;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000038:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1090209	1096082	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000038;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000038:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1096083	1096146	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000038;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000038:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1096147	1104052	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000038;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000038:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1104053	1104154	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000038;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000038:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1104079	1104154	.	+	0	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000038;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000038:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	1104079	1104081	.	+	0	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000038;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03009_ch_T0000038;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1104155	1107146	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000038;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000038:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1107147	1107289	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000038;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000038:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1107147	1107289	.	+	2	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000038;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000038:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1107290	1109886	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000038;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000038:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1109887	1110010	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000038;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000038:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1109887	1110010	.	+	0	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000038;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000038:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1110011	1110126	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000038;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000038:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1110127	1110256	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000038;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000038:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1110127	1110256	.	+	2	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000038;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000038:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1110257	1111702	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000038;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000038:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1111703	1111875	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000038;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000038:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1111703	1111875	.	+	1	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000038;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000038:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1111876	1115991	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000038;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000038:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1115992	1116125	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000038;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000038:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1115992	1116125	.	+	2	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000038;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000038:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1116126	1117090	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000038;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000038:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1117091	1117120	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000038;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000038:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1117091	1117120	.	+	0	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000038;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000038:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1117121	1123237	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000038;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000038:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1123238	1123373	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000038;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000038:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1123238	1123373	.	+	0	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000038;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000038:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1123374	1126671	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000038;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000038:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1126672	1126768	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000038;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000038:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1126672	1126768	.	+	2	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000038;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000038:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1126769	1128534	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000038;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000038:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1128535	1128616	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000038;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000038:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1128535	1128616	.	+	1	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000038;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000038:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1128617	1144801	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000038;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000038:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1144802	1144824	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000038;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000038:12;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1144802	1144824	.	+	0	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000038;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000038:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1144825	1144912	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000038;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000038:12;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1144913	1145183	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000038;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000038:13;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1144913	1145051	.	+	1	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000038;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000038:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	1145049	1145051	.	+	0	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000038;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03009_ch_T0000038;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	1090143	1145465	100	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000039;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03009_ch_T0000039;Name=CSF2RA
HG03009_chrY	CAT	exon	1090143	1090208	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000039;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000039:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1090209	1096082	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000039;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000039:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1096083	1096146	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000039;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000039:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1096147	1104052	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000039;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000039:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1104053	1104154	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000039;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000039:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1104079	1104154	.	+	0	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000039;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000039:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	1104079	1104081	.	+	0	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000039;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03009_ch_T0000039;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1104155	1107146	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000039;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000039:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1107147	1107289	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000039;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000039:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1107147	1107289	.	+	2	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000039;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000039:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1107290	1109886	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000039;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000039:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1109887	1110010	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000039;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000039:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1109887	1110010	.	+	0	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000039;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000039:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1110011	1110126	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000039;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000039:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1110127	1110256	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000039;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000039:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1110127	1110256	.	+	2	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000039;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000039:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1110257	1111702	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000039;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000039:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1111703	1111875	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000039;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000039:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1111703	1111875	.	+	1	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000039;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000039:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1111876	1115991	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000039;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000039:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1115992	1116125	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000039;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000039:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1115992	1116125	.	+	2	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000039;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000039:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1116126	1117090	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000039;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000039:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1117091	1117120	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000039;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000039:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1117091	1117120	.	+	0	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000039;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000039:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1117121	1123237	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000039;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000039:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1123238	1123373	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000039;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000039:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1123238	1123373	.	+	0	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000039;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000039:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1123374	1126671	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000039;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000039:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1126672	1126768	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000039;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000039:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1126672	1126768	.	+	2	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000039;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000039:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1126769	1128534	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000039;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000039:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1128535	1128616	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000039;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000039:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1128535	1128616	.	+	1	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000039;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000039:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1128617	1144805	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000039;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000039:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1144806	1145465	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000039;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000039:12;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1144806	1144850	.	+	0	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000039;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000039:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	1144848	1144850	.	+	0	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000039;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03009_ch_T0000039;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	1090143	1145465	100	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000040;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03009_ch_T0000040;Name=CSF2RA
HG03009_chrY	CAT	exon	1090143	1090208	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000040;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000040:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1090209	1096082	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000040;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000040:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1096083	1096170	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000040;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000040:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1096171	1104052	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000040;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000040:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1104053	1104154	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000040;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000040:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1104079	1104154	.	+	0	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000040;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000040:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	1104079	1104081	.	+	0	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000040;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03009_ch_T0000040;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1104155	1107146	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000040;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000040:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1107147	1107289	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000040;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000040:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1107147	1107289	.	+	2	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000040;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000040:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1107290	1109886	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000040;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000040:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1109887	1110010	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000040;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000040:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1109887	1110010	.	+	0	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000040;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000040:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1110011	1110126	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000040;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000040:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1110127	1110256	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000040;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000040:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1110127	1110256	.	+	2	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000040;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000040:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1110257	1111702	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000040;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000040:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1111703	1111875	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000040;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000040:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1111703	1111875	.	+	1	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000040;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000040:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1111876	1115991	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000040;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000040:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1115992	1116125	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000040;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000040:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1115992	1116125	.	+	2	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000040;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000040:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1116126	1117090	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000040;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000040:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1117091	1117120	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000040;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000040:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1117091	1117120	.	+	0	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000040;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000040:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1117121	1123237	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000040;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000040:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1123238	1123373	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000040;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000040:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1123238	1123373	.	+	0	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000040;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000040:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1123374	1126671	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000040;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000040:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1126672	1126768	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000040;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000040:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1126672	1126768	.	+	2	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000040;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000040:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1126769	1128534	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000040;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000040:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1128535	1128616	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000040;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000040:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1128535	1128616	.	+	1	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000040;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000040:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1128617	1144801	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000040;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000040:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1144802	1145465	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000040;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000040:12;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1144802	1144828	.	+	0	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000040;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000040:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	1144826	1144828	.	+	0	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000040;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03009_ch_T0000040;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	1090143	1145465	100	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000041;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03009_ch_T0000041;Name=CSF2RA
HG03009_chrY	CAT	exon	1090143	1090208	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000041;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000041:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1090209	1096082	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000041;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000041:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1096083	1096146	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000041;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000041:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1096147	1104052	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000041;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000041:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1104053	1104154	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000041;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000041:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1104079	1104154	.	+	0	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000041;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000041:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	1104079	1104081	.	+	0	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000041;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03009_ch_T0000041;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1104155	1107146	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000041;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000041:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1107147	1107289	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000041;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000041:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1107147	1107289	.	+	2	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000041;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000041:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1107290	1109886	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000041;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000041:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1109887	1110010	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000041;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000041:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1109887	1110010	.	+	0	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000041;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000041:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1110011	1110126	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000041;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000041:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1110127	1110256	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000041;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000041:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1110127	1110256	.	+	2	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000041;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000041:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1110257	1111702	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000041;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000041:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1111703	1111875	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000041;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000041:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1111703	1111875	.	+	1	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000041;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000041:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1111876	1115991	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000041;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000041:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1115992	1116125	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000041;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000041:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1115992	1116125	.	+	2	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000041;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000041:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1116126	1117090	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000041;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000041:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1117091	1117120	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000041;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000041:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1117091	1117120	.	+	0	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000041;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000041:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1117121	1123237	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000041;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000041:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1123238	1123373	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000041;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000041:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1123238	1123373	.	+	0	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000041;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000041:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1123374	1126671	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000041;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000041:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1126672	1126768	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000041;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000041:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1126672	1126768	.	+	2	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000041;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000041:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1126769	1128534	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000041;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000041:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1128535	1128616	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000041;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000041:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1128535	1128616	.	+	1	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000041;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000041:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1128617	1144801	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000041;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000041:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1144802	1145465	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000041;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000041:12;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1144802	1144828	.	+	0	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000041;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000041:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	1144826	1144828	.	+	0	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000041;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03009_ch_T0000041;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	1090143	1145465	100	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000042;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03009_ch_T0000042;Name=CSF2RA
HG03009_chrY	CAT	exon	1090143	1090208	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000042;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000042:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1090209	1104052	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000042;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000042:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1104053	1104154	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000042;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000042:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1104079	1104154	.	+	0	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000042;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000042:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	1104079	1104081	.	+	0	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000042;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03009_ch_T0000042;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1104155	1107146	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000042;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000042:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1107147	1107289	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000042;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000042:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1107147	1107289	.	+	2	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000042;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000042:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1107290	1109886	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000042;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000042:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1109887	1110010	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000042;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000042:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1109887	1110010	.	+	0	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000042;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000042:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1110011	1110126	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000042;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000042:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1110127	1110256	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000042;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000042:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1110127	1110256	.	+	2	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000042;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000042:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1110257	1111702	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000042;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000042:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1111703	1111875	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000042;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000042:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1111703	1111875	.	+	1	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000042;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000042:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1111876	1115991	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000042;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000042:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1115992	1116125	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000042;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000042:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1115992	1116125	.	+	2	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000042;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000042:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1116126	1117090	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000042;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000042:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1117091	1117120	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000042;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000042:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1117091	1117120	.	+	0	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000042;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000042:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1117121	1123237	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000042;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000042:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1123238	1123373	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000042;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000042:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1123238	1123373	.	+	0	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000042;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000042:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1123374	1126671	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000042;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000042:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1126672	1126768	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000042;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000042:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1126672	1126768	.	+	2	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000042;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000042:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1126769	1128534	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000042;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000042:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1128535	1128616	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000042;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000042:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1128535	1128616	.	+	1	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000042;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000042:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1128617	1144805	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000042;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000042:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1144806	1145465	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000042;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000042:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1144806	1144850	.	+	0	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000042;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000042:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	1144848	1144850	.	+	0	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000042;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03009_ch_T0000042;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	1090143	1145465	100	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000043;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03009_ch_T0000043;Name=CSF2RA
HG03009_chrY	CAT	exon	1090143	1090208	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000043;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000043:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1090209	1104052	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000043;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000043:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1104053	1104154	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000043;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000043:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1104079	1104154	.	+	0	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000043;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000043:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	1104079	1104081	.	+	0	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000043;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03009_ch_T0000043;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1104155	1107146	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000043;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000043:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1107147	1107289	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000043;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000043:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1107147	1107289	.	+	2	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000043;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000043:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1107290	1109886	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000043;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000043:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1109887	1110010	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000043;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000043:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1109887	1110010	.	+	0	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000043;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000043:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1110011	1110126	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000043;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000043:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1110127	1110256	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000043;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000043:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1110127	1110256	.	+	2	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000043;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000043:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1110257	1111702	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000043;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000043:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1111703	1111875	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000043;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000043:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1111703	1111875	.	+	1	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000043;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000043:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1111876	1115991	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000043;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000043:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1115992	1116125	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000043;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000043:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1115992	1116125	.	+	2	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000043;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000043:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1116126	1117090	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000043;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000043:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1117091	1117120	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000043;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000043:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1117091	1117120	.	+	0	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000043;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000043:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1117121	1123237	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000043;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000043:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1123238	1123373	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000043;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000043:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1123238	1123373	.	+	0	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000043;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000043:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1123374	1128534	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000043;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000043:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1128535	1128616	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000043;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000043:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1128535	1128590	.	+	2	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000043;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000043:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	1128588	1128590	.	+	0	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000043;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03009_ch_T0000043;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1128617	1144801	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000043;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000043:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1144802	1145465	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000043;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000043:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	1090143	1133185	100	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000044;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03009_ch_T0000044;Name=CSF2RA
HG03009_chrY	CAT	exon	1090143	1090208	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000044;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000044:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1090209	1096082	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000044;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000044:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1096083	1096170	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000044;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000044:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1096171	1104052	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000044;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000044:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1104053	1104154	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000044;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000044:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1104079	1104154	.	+	0	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000044;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000044:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	1104079	1104081	.	+	0	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000044;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03009_ch_T0000044;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1104155	1107146	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000044;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000044:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1107147	1107289	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000044;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000044:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1107147	1107289	.	+	2	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000044;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000044:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1107290	1109886	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000044;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000044:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1109887	1110010	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000044;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000044:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1109887	1110010	.	+	0	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000044;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000044:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1110011	1110126	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000044;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000044:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1110127	1110256	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000044;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000044:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1110127	1110256	.	+	2	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000044;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000044:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1110257	1111702	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000044;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000044:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1111703	1111875	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000044;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000044:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1111703	1111875	.	+	1	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000044;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000044:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1111876	1115991	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000044;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000044:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1115992	1116125	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000044;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000044:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1115992	1116125	.	+	2	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000044;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000044:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1116126	1117090	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000044;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000044:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1117091	1117120	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000044;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000044:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1117091	1117120	.	+	0	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000044;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000044:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1117121	1123237	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000044;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000044:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1123238	1123373	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000044;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000044:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1123238	1123373	.	+	0	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000044;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000044:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1123374	1132651	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000044;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000044:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1132652	1133185	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000044;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000044:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1132652	1132839	.	+	2	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000044;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000044:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	1132837	1132839	.	+	0	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000044;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03009_ch_T0000044;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	1090143	1145465	100	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000045;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03009_ch_T0000045;Name=CSF2RA
HG03009_chrY	CAT	exon	1090143	1090208	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000045;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000045:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1090209	1096082	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000045;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000045:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1096083	1096170	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000045;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000045:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1096171	1104052	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000045;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000045:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1104053	1104154	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000045;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000045:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1104079	1104154	.	+	0	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000045;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000045:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	1104079	1104081	.	+	0	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000045;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03009_ch_T0000045;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1104155	1107146	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000045;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000045:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1107147	1107289	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000045;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000045:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1107147	1107289	.	+	2	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000045;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000045:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1107290	1109886	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000045;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000045:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1109887	1110010	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000045;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000045:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1109887	1110010	.	+	0	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000045;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000045:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1110011	1110126	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000045;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000045:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1110127	1110256	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000045;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000045:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1110127	1110256	.	+	2	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000045;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000045:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1110257	1111702	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000045;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000045:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1111703	1111875	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000045;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000045:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1111703	1111875	.	+	1	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000045;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000045:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1111876	1115991	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000045;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000045:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1115992	1116125	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000045;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000045:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1115992	1116125	.	+	2	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000045;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000045:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1116126	1117090	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000045;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000045:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1117091	1117120	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000045;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000045:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1117091	1117120	.	+	0	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000045;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000045:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1117121	1123237	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000045;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000045:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1123238	1123373	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000045;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000045:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1123238	1123373	.	+	0	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000045;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000045:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1123374	1126671	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000045;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000045:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1126672	1126768	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000045;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000045:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1126672	1126768	.	+	2	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000045;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000045:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1126769	1128534	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000045;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000045:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1128535	1128616	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000045;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000045:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1128535	1128616	.	+	1	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000045;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000045:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1128617	1144805	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000045;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000045:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1144806	1145465	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000045;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000045:12;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1144806	1144850	.	+	0	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000045;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000045:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	1144848	1144850	.	+	0	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000045;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03009_ch_T0000045;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	1090143	1145465	100	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000046;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03009_ch_T0000046;Name=CSF2RA
HG03009_chrY	CAT	exon	1090143	1090208	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000046;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000046:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1090209	1104052	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000046;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000046:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1104053	1104154	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000046;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000046:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1104079	1104154	.	+	0	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000046;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000046:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	1104079	1104081	.	+	0	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000046;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03009_ch_T0000046;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1104155	1107146	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000046;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000046:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1107147	1107289	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000046;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000046:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1107147	1107289	.	+	2	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000046;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000046:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1107290	1109886	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000046;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000046:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1109887	1110010	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000046;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000046:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1109887	1110010	.	+	0	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000046;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000046:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1110011	1110126	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000046;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000046:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1110127	1110256	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000046;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000046:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1110127	1110256	.	+	2	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000046;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000046:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1110257	1111702	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000046;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000046:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1111703	1111875	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000046;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000046:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1111703	1111875	.	+	1	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000046;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000046:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1111876	1115991	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000046;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000046:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1115992	1116125	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000046;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000046:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1115992	1116125	.	+	2	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000046;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000046:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1116126	1117090	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000046;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000046:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1117091	1117120	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000046;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000046:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1117091	1117120	.	+	0	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000046;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000046:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1117121	1123237	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000046;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000046:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1123238	1123373	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000046;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000046:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1123238	1123373	.	+	0	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000046;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000046:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1123374	1128534	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000046;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000046:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1128535	1128616	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000046;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000046:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1128535	1128590	.	+	2	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000046;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000046:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	1128588	1128590	.	+	0	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000046;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03009_ch_T0000046;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1128617	1144805	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000046;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000046:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1144806	1145465	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000046;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000046:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	1090143	1147580	100	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000047;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03009_ch_T0000047;Name=CSF2RA
HG03009_chrY	CAT	exon	1090143	1090208	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000047;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000047:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1090209	1096082	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000047;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000047:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1096083	1096146	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000047;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000047:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1096147	1104052	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000047;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000047:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1104053	1104154	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000047;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000047:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1104079	1104154	.	+	0	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000047;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000047:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	1104079	1104081	.	+	0	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000047;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03009_ch_T0000047;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1104155	1107146	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000047;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000047:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1107147	1107289	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000047;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000047:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1107147	1107289	.	+	2	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000047;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000047:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1107290	1109886	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000047;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000047:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1109887	1110010	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000047;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000047:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1109887	1110010	.	+	0	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000047;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000047:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1110011	1110126	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000047;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000047:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1110127	1110256	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000047;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000047:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1110127	1110256	.	+	2	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000047;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000047:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1110257	1111702	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000047;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000047:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1111703	1111875	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000047;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000047:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1111703	1111875	.	+	1	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000047;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000047:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1111876	1115991	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000047;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000047:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1115992	1116125	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000047;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000047:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1115992	1116125	.	+	2	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000047;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000047:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1116126	1117090	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000047;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000047:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1117091	1117120	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000047;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000047:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1117091	1117120	.	+	0	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000047;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000047:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1117121	1123237	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000047;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000047:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1123238	1123373	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000047;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000047:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1123238	1123373	.	+	0	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000047;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000047:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1123374	1126671	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000047;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000047:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1126672	1126768	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000047;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000047:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1126672	1126768	.	+	2	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000047;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000047:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1126769	1128534	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000047;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000047:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1128535	1128616	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000047;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000047:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1128535	1128616	.	+	1	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000047;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000047:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1128617	1135513	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000047;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000047:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1135514	1135620	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000047;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000047:12;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1135514	1135582	.	+	0	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000047;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000047:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	1135580	1135582	.	+	0	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000047;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03009_ch_T0000047;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1135621	1147389	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000047;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000047:12;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1147390	1147580	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000047;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000047:13;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	1090143	1147580	100	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000048;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03009_ch_T0000048;Name=CSF2RA
HG03009_chrY	CAT	exon	1090143	1090208	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000048;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000048:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1090209	1104052	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000048;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000048:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1104053	1104154	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000048;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000048:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1104079	1104154	.	+	0	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000048;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000048:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	1104079	1104081	.	+	0	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000048;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03009_ch_T0000048;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1104155	1107146	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000048;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000048:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1107147	1107289	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000048;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000048:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1107147	1107289	.	+	2	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000048;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000048:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1107290	1109886	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000048;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000048:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1109887	1110010	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000048;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000048:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1109887	1110010	.	+	0	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000048;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000048:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1110011	1110126	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000048;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000048:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1110127	1110256	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000048;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000048:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1110127	1110256	.	+	2	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000048;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000048:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1110257	1111702	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000048;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000048:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1111703	1111875	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000048;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000048:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1111703	1111875	.	+	1	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000048;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000048:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1111876	1115991	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000048;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000048:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1115992	1116125	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000048;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000048:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1115992	1116125	.	+	2	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000048;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000048:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1116126	1117090	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000048;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000048:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1117091	1117120	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000048;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000048:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1117091	1117120	.	+	0	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000048;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000048:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1117121	1123237	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000048;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000048:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1123238	1123373	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000048;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000048:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1123238	1123373	.	+	0	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000048;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000048:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1123374	1126671	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000048;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000048:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1126672	1126768	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000048;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000048:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1126672	1126768	.	+	2	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000048;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000048:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1126769	1128534	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000048;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000048:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1128535	1128616	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000048;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000048:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1128535	1128616	.	+	1	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000048;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000048:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1128617	1147389	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000048;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000048:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1147390	1147580	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000048;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000048:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1147390	1147425	.	+	0	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000048;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000048:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	1147423	1147425	.	+	0	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000048;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03009_ch_T0000048;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	1090143	1147580	100	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000049;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03009_ch_T0000049;Name=CSF2RA
HG03009_chrY	CAT	exon	1090143	1090208	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000049;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000049:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1090209	1096082	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000049;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000049:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1096083	1096170	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000049;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000049:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1096171	1104052	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000049;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000049:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1104053	1104154	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000049;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000049:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1104079	1104154	.	+	0	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000049;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000049:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	1104079	1104081	.	+	0	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000049;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03009_ch_T0000049;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1104155	1107146	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000049;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000049:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1107147	1107289	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000049;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000049:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1107147	1107289	.	+	2	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000049;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000049:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1107290	1109886	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000049;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000049:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1109887	1110010	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000049;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000049:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1109887	1110010	.	+	0	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000049;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000049:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1110011	1110126	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000049;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000049:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1110127	1110256	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000049;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000049:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1110127	1110256	.	+	2	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000049;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000049:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1110257	1111702	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000049;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000049:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1111703	1111875	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000049;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000049:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1111703	1111875	.	+	1	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000049;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000049:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1111876	1115991	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000049;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000049:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1115992	1116125	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000049;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000049:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1115992	1116125	.	+	2	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000049;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000049:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1116126	1117090	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000049;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000049:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1117091	1117120	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000049;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000049:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1117091	1117120	.	+	0	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000049;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000049:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1117121	1123237	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000049;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000049:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1123238	1123373	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000049;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000049:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1123238	1123373	.	+	0	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000049;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000049:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1123374	1126671	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000049;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000049:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1126672	1126768	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000049;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000049:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1126672	1126768	.	+	2	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000049;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000049:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1126769	1128534	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000049;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000049:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1128535	1128616	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000049;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000049:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1128535	1128616	.	+	1	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000049;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000049:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1128617	1147389	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000049;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000049:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1147390	1147580	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000049;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000049:12;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1147390	1147425	.	+	0	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000049;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000049:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	1147423	1147425	.	+	0	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000049;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03009_ch_T0000049;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	1090143	1147580	100	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000050;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03009_ch_T0000050;Name=CSF2RA
HG03009_chrY	CAT	exon	1090143	1090208	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000050;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000050:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1090209	1104052	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000050;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000050:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1104053	1104154	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000050;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000050:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1104079	1104154	.	+	0	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000050;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000050:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	1104079	1104081	.	+	0	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000050;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03009_ch_T0000050;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1104155	1107146	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000050;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000050:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1107147	1107289	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000050;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000050:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1107147	1107289	.	+	2	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000050;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000050:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1107290	1109886	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000050;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000050:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1109887	1110010	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000050;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000050:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1109887	1110010	.	+	0	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000050;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000050:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1110011	1110126	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000050;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000050:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1110127	1110256	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000050;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000050:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1110127	1110256	.	+	2	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000050;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000050:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1110257	1111702	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000050;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000050:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1111703	1111875	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000050;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000050:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1111703	1111875	.	+	1	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000050;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000050:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1111876	1115991	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000050;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000050:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1115992	1116125	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000050;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000050:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1115992	1116125	.	+	2	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000050;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000050:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1116126	1117090	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000050;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000050:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1117091	1117120	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000050;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000050:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1117091	1117120	.	+	0	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000050;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000050:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1117121	1123237	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000050;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000050:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1123238	1123373	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000050;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000050:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1123238	1123373	.	+	0	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000050;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000050:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1123374	1128534	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000050;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000050:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1128535	1128616	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000050;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000050:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1128535	1128590	.	+	2	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000050;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000050:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	1128588	1128590	.	+	0	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000050;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03009_ch_T0000050;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1128617	1147389	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000050;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000050:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1147390	1147580	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000050;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000050:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	1090143	1147580	100	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000051;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03009_ch_T0000051;Name=CSF2RA
HG03009_chrY	CAT	exon	1090143	1090208	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000051;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000051:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1090209	1096082	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000051;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000051:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1096083	1096146	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000051;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000051:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1096147	1104052	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000051;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000051:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1104053	1104154	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000051;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000051:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1104079	1104154	.	+	0	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000051;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000051:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	1104079	1104081	.	+	0	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000051;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03009_ch_T0000051;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1104155	1107146	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000051;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000051:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1107147	1107289	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000051;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000051:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1107147	1107289	.	+	2	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000051;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000051:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1107290	1109886	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000051;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000051:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1109887	1110010	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000051;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000051:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1109887	1110010	.	+	0	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000051;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000051:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1110011	1110126	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000051;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000051:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1110127	1110256	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000051;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000051:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1110127	1110256	.	+	2	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000051;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000051:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1110257	1111702	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000051;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000051:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1111703	1111875	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000051;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000051:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1111703	1111875	.	+	1	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000051;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000051:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1111876	1115991	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000051;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000051:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1115992	1116125	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000051;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000051:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1115992	1116125	.	+	2	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000051;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000051:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1116126	1117090	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000051;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000051:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1117091	1117120	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000051;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000051:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1117091	1117120	.	+	0	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000051;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000051:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1117121	1123237	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000051;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000051:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1123238	1123373	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000051;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000051:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1123238	1123373	.	+	0	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000051;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000051:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1123374	1126671	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000051;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000051:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1126672	1126768	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000051;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000051:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1126672	1126768	.	+	2	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000051;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000051:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1126769	1128534	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000051;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000051:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1128535	1128616	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000051;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000051:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1128535	1128616	.	+	1	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000051;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000051:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1128617	1147389	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000051;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000051:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1147390	1147580	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000051;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000051:12;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1147390	1147425	.	+	0	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000051;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000051:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	1147423	1147425	.	+	0	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000051;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03009_ch_T0000051;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	1090143	1133185	100	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000052;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03009_ch_T0000052;Name=CSF2RA
HG03009_chrY	CAT	exon	1090143	1090208	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000052;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000052:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1090209	1096082	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000052;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000052:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1096083	1096146	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000052;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000052:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1096147	1104052	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000052;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000052:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1104053	1104154	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000052;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000052:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1104079	1104154	.	+	0	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000052;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000052:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	1104079	1104081	.	+	0	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000052;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03009_ch_T0000052;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1104155	1107146	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000052;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000052:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1107147	1107289	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000052;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000052:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1107147	1107289	.	+	2	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000052;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000052:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1107290	1109886	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000052;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000052:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1109887	1110010	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000052;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000052:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1109887	1110010	.	+	0	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000052;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000052:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1110011	1110126	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000052;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000052:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1110127	1110256	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000052;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000052:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1110127	1110256	.	+	2	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000052;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000052:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1110257	1111702	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000052;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000052:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1111703	1111875	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000052;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000052:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1111703	1111875	.	+	1	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000052;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000052:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1111876	1115991	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000052;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000052:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1115992	1116125	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000052;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000052:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1115992	1116125	.	+	2	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000052;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000052:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1116126	1117090	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000052;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000052:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1117091	1117120	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000052;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000052:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1117091	1117120	.	+	0	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000052;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000052:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1117121	1123237	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000052;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000052:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1123238	1123373	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000052;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000052:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1123238	1123373	.	+	0	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000052;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000052:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1123374	1128534	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000052;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000052:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1128535	1128616	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000052;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000052:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1128535	1128590	.	+	2	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000052;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000052:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	1128588	1128590	.	+	0	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000052;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03009_ch_T0000052;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1128617	1132651	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000052;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000052:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1132652	1133185	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000052;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000052:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	1090143	1133185	100	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000053;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03009_ch_T0000053;Name=CSF2RA
HG03009_chrY	CAT	exon	1090143	1090208	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000053;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000053:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1090209	1096082	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000053;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000053:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1096083	1096170	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000053;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000053:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1096171	1104052	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000053;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000053:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1104053	1104154	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000053;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000053:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1104079	1104154	.	+	0	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000053;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000053:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	1104079	1104081	.	+	0	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000053;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03009_ch_T0000053;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1104155	1107146	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000053;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000053:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1107147	1107289	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000053;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000053:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1107147	1107289	.	+	2	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000053;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000053:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1107290	1109886	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000053;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000053:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1109887	1110010	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000053;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000053:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1109887	1110010	.	+	0	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000053;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000053:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1110011	1110126	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000053;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000053:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1110127	1110256	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000053;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000053:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1110127	1110256	.	+	2	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000053;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000053:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1110257	1111702	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000053;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000053:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1111703	1111875	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000053;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000053:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1111703	1111875	.	+	1	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000053;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000053:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1111876	1128534	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000053;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000053:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1128535	1128616	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000053;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000053:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1128535	1128590	.	+	2	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000053;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000053:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	1128588	1128590	.	+	0	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000053;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03009_ch_T0000053;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1128617	1132651	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000053;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000053:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1132652	1133185	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000053;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000053:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	1090143	1133185	100	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000054;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03009_ch_T0000054;Name=CSF2RA
HG03009_chrY	CAT	exon	1090143	1090208	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000054;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000054:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1090209	1096082	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000054;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000054:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1096083	1096146	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000054;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000054:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1096147	1103783	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000054;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000054:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1103784	1103935	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000054;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000054:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1103936	1104052	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000054;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000054:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1104053	1104154	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000054;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000054:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1104079	1104154	.	+	0	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000054;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000054:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	1104079	1104081	.	+	0	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000054;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03009_ch_T0000054;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1104155	1107146	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000054;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000054:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1107147	1107289	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000054;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000054:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1107147	1107289	.	+	2	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000054;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000054:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1107290	1109886	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000054;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000054:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1109887	1110010	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000054;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000054:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1109887	1110010	.	+	0	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000054;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000054:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1110011	1110126	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000054;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000054:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1110127	1110256	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000054;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000054:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1110127	1110256	.	+	2	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000054;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000054:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1110257	1111702	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000054;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000054:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1111703	1111875	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000054;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000054:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1111703	1111875	.	+	1	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000054;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000054:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1111876	1115991	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000054;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000054:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1115992	1116125	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000054;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000054:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1115992	1116125	.	+	2	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000054;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000054:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1116126	1117090	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000054;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000054:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1117091	1117120	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000054;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000054:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1117091	1117120	.	+	0	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000054;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000054:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1117121	1123237	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000054;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000054:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1123238	1123373	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000054;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000054:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1123238	1123373	.	+	0	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000054;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000054:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1123374	1126671	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000054;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000054:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1126672	1126768	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000054;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000054:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1126672	1126768	.	+	2	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000054;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000054:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1126769	1128534	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000054;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000054:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1128535	1128616	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000054;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000054:12;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1128535	1128616	.	+	1	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000054;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000054:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1128617	1132651	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000054;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000054:12;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1132652	1133185	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000054;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000054:13;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1132652	1132729	.	+	0	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000054;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000054:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	1132727	1132729	.	+	0	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000054;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03009_ch_T0000054;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	1090143	1133185	100	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000055;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03009_ch_T0000055;Name=CSF2RA
HG03009_chrY	CAT	exon	1090143	1090208	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000055;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000055:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1090209	1096082	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000055;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000055:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1096083	1096146	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000055;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000055:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1096147	1104052	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000055;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000055:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1104053	1104154	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000055;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000055:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1104079	1104154	.	+	0	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000055;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000055:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	1104079	1104081	.	+	0	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000055;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03009_ch_T0000055;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1104155	1107146	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000055;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000055:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1107147	1107289	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000055;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000055:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1107147	1107289	.	+	2	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000055;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000055:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1107290	1109886	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000055;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000055:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1109887	1110010	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000055;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000055:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1109887	1110010	.	+	0	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000055;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000055:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1110011	1110126	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000055;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000055:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1110127	1110256	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000055;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000055:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1110127	1110256	.	+	2	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000055;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000055:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1110257	1111702	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000055;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000055:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1111703	1111875	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000055;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000055:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1111703	1111875	.	+	1	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000055;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000055:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1111876	1115991	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000055;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000055:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1115992	1116125	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000055;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000055:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1115992	1116125	.	+	2	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000055;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000055:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1116126	1117090	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000055;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000055:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1117091	1117120	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000055;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000055:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1117091	1117120	.	+	0	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000055;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000055:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1117121	1123237	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000055;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000055:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1123238	1123373	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000055;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000055:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1123238	1123373	.	+	0	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000055;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000055:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1123374	1126009	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000055;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000055:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1126010	1126111	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000055;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000055:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1126010	1126111	.	+	2	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000055;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000055:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1126112	1126671	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000055;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000055:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1126672	1126768	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000055;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000055:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1126672	1126768	.	+	2	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000055;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000055:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1126769	1128534	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000055;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000055:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1128535	1128616	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000055;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000055:12;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1128535	1128616	.	+	1	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000055;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000055:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1128617	1132651	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000055;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000055:12;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1132652	1133185	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000055;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000055:13;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1132652	1132729	.	+	0	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000055;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000055:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	1132727	1132729	.	+	0	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000055;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03009_ch_T0000055;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	1090143	1133185	100	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000056;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03009_ch_T0000056;Name=CSF2RA
HG03009_chrY	CAT	exon	1090143	1090208	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000056;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000056:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1090209	1104052	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000056;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000056:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1104053	1104154	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000056;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000056:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1104155	1109886	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000056;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000056:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1109887	1110010	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000056;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000056:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1110011	1110126	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000056;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000056:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1110127	1110256	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000056;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000056:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1110183	1110256	.	+	0	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000056;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000056:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	1110183	1110185	.	+	0	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000056;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03009_ch_T0000056;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1110257	1111702	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000056;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000056:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1111703	1111875	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000056;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000056:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1111703	1111875	.	+	1	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000056;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000056:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1111876	1115991	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000056;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000056:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1115992	1116125	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000056;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000056:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1115992	1116125	.	+	2	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000056;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000056:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1116126	1117090	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000056;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000056:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1117091	1117120	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000056;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000056:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1117091	1117120	.	+	0	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000056;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000056:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1117121	1123237	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000056;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000056:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1123238	1123373	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000056;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000056:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1123238	1123373	.	+	0	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000056;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000056:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1123374	1126671	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000056;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000056:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1126672	1126768	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000056;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000056:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1126672	1126768	.	+	2	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000056;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000056:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1126769	1128534	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000056;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000056:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1128535	1128616	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000056;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000056:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1128535	1128616	.	+	1	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000056;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000056:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1128617	1132651	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000056;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000056:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1132652	1133185	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000056;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000056:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1132652	1132729	.	+	0	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000056;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000056:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	1132727	1132729	.	+	0	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000056;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03009_ch_T0000056;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	1090143	1133185	1000	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000057;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_G0000009;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=HG03009_ch_T0000057;Name=CSF2RA
HG03009_chrY	CAT	exon	1090143	1090208	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000057;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000057;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000057:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1090209	1096082	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000057;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000057;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000057:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1096083	1096170	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000057;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000057;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000057:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1096171	1104052	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000057;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000057;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000057:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1104053	1104154	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000057;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000057;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000057:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1104155	1107146	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000057;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000057;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000057:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1107147	1107289	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000057;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000057;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000057:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1107290	1109886	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000057;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000057;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000057:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1109887	1110010	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000057;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000057;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000057:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1110011	1110126	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000057;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000057;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000057:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1110127	1110256	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000057;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000057;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000057:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1110257	1111702	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000057;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000057;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000057:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1111703	1111875	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000057;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000057;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000057:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1111876	1115991	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000057;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000057;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000057:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1115992	1116125	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000057;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000057;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000057:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1116126	1117090	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000057;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000057;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000057:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1117091	1117120	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000057;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000057;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000057:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1117121	1126671	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000057;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000057;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000057:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1126672	1126768	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000057;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000057;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000057:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1126769	1128534	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000057;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000057;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000057:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1128535	1128616	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000057;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000057;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000057:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1128617	1132651	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000057;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000057;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000057:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1132652	1133185	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000057;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000057;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000057:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	1103611	1145183	100	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000058;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03009_ch_T0000058;Name=CSF2RA
HG03009_chrY	CAT	exon	1103611	1103935	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000058;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000058:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1103936	1104052	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000058;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000058:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1104053	1104154	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000058;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000058:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1104079	1104154	.	+	0	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000058;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000058:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	1104079	1104081	.	+	0	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000058;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03009_ch_T0000058;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1104155	1107146	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000058;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000058:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1107147	1107289	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000058;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000058:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1107147	1107289	.	+	2	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000058;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000058:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1107290	1109886	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000058;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000058:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1109887	1110010	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000058;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000058:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1109887	1110010	.	+	0	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000058;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000058:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1110011	1110126	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000058;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000058:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1110127	1110256	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000058;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000058:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1110127	1110256	.	+	2	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000058;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000058:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1110257	1111702	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000058;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000058:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1111703	1111875	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000058;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000058:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1111703	1111875	.	+	1	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000058;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000058:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1111876	1115991	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000058;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000058:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1115992	1116125	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000058;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000058:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1115992	1116125	.	+	2	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000058;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000058:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1116126	1117090	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000058;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000058:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1117091	1117120	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000058;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000058:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1117091	1117120	.	+	0	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000058;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000058:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1117121	1123237	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000058;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000058:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1123238	1123373	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000058;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000058:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1123238	1123373	.	+	0	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000058;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000058:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1123374	1126671	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000058;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000058:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1126672	1126768	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000058;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000058:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1126672	1126768	.	+	2	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000058;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000058:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1126769	1128534	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000058;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000058:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1128535	1128616	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000058;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000058:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1128535	1128616	.	+	1	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000058;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000058:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1128617	1144801	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000058;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000058:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1144802	1144824	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000058;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000058:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1144802	1144824	.	+	0	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000058;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000058:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1144825	1144912	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000058;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000058:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1144913	1145183	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000058;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000058:12;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1144913	1145051	.	+	1	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000058;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000058:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	1145049	1145051	.	+	0	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000058;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03009_ch_T0000058;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	1104178	1145187	100	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000059;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03009_ch_T0000059;Name=CSF2RA
HG03009_chrY	CAT	exon	1104178	1104417	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000059;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000059:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1104418	1107146	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000059;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000059:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1107147	1107289	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000059;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000059:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1107203	1107289	.	+	0	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000059;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000059:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	1107203	1107205	.	+	0	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000059;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03009_ch_T0000059;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1107290	1109886	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000059;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000059:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1109887	1110010	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000059;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000059:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1109887	1110010	.	+	0	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000059;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000059:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1110011	1110126	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000059;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000059:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1110127	1110256	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000059;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000059:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1110127	1110256	.	+	2	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000059;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000059:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1110257	1111702	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000059;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000059:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1111703	1111875	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000059;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000059:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1111703	1111875	.	+	1	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000059;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000059:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1111876	1115991	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000059;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000059:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1115992	1116125	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000059;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000059:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1115992	1116125	.	+	2	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000059;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000059:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1116126	1117090	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000059;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000059:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1117091	1117120	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000059;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000059:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1117091	1117120	.	+	0	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000059;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000059:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1117121	1123237	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000059;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000059:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1123238	1123373	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000059;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000059:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1123238	1123373	.	+	0	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000059;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000059:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1123374	1126671	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000059;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000059:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1126672	1126768	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000059;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000059:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1126672	1126768	.	+	2	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000059;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000059:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1126769	1128534	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000059;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000059:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1128535	1128616	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000059;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000059:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1128535	1128616	.	+	1	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000059;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000059:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1128617	1144801	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000059;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000059:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1144802	1144824	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000059;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000059:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1144802	1144824	.	+	0	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000059;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000059:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1144825	1144912	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000059;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03009_ch_T0000059:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1144913	1145187	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000059;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03009_ch_T0000059:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1144913	1145051	.	+	1	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000059;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03009_ch_T0000059:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	1145049	1145051	.	+	0	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000059;gene_id=HG03009_ch_G0000009;Parent=HG03009_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03009_ch_T0000059;Name=CSF2RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	1114905	1115357	.	-	.	source_gene_common_name=LOC124905238;source_gene=hg002_chrY_paternal_15;alternative_source_transcripts=hg002_chrY_paternal_15.1;gene_id=HG03009_ch_G0000010;gene_biotype=lncRNA;gene_name=LOC124905238;gene_sources=liftoff,transMap;ID=HG03009_ch_G0000010;Name=LOC124905238
HG03009_chrY	CAT	transcript	1114905	1115357	1000	-	.	source_transcript=hg002_chrY_paternal_15.1;source_transcript_name=hg002_chrY_paternal_15.1;source_gene=hg002_chrY_paternal_15;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_15;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_15.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_15.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905238;alternative_source_transcripts=hg002_chrY_paternal_15.1;AdditionalSources=liftoff;transcript_id=HG03009_ch_T0000060;gene_id=HG03009_ch_G0000010;Parent=HG03009_ch_G0000010;transcript_name=hg002_chrY_paternal_15.1;gene_name=LOC124905238;ID=HG03009_ch_T0000060;Name=LOC124905238
HG03009_chrY	CAT	exon	1114905	1114941	.	-	.	source_transcript=hg002_chrY_paternal_15.1;source_transcript_name=hg002_chrY_paternal_15.1;source_gene=hg002_chrY_paternal_15;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_15;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_15.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_15.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905238;alternative_source_transcripts=hg002_chrY_paternal_15.1;AdditionalSources=liftoff;transcript_id=HG03009_ch_T0000060;gene_id=HG03009_ch_G0000010;Parent=HG03009_ch_T0000060;transcript_name=hg002_chrY_paternal_15.1;gene_name=LOC124905238;ID=exon:HG03009_ch_T0000060:0;Name=LOC124905238;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1114942	1115201	.	-	.	source_transcript=hg002_chrY_paternal_15.1;source_transcript_name=hg002_chrY_paternal_15.1;source_gene=hg002_chrY_paternal_15;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_15;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_15.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_15.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905238;alternative_source_transcripts=hg002_chrY_paternal_15.1;AdditionalSources=liftoff;transcript_id=HG03009_ch_T0000060;gene_id=HG03009_ch_G0000010;Parent=HG03009_ch_T0000060;transcript_name=hg002_chrY_paternal_15.1;gene_name=LOC124905238;ID=intron:HG03009_ch_T0000060:0;Name=LOC124905238;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1115202	1115357	.	-	.	source_transcript=hg002_chrY_paternal_15.1;source_transcript_name=hg002_chrY_paternal_15.1;source_gene=hg002_chrY_paternal_15;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_15;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_15.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_15.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905238;alternative_source_transcripts=hg002_chrY_paternal_15.1;AdditionalSources=liftoff;transcript_id=HG03009_ch_T0000060;gene_id=HG03009_ch_G0000010;Parent=HG03009_ch_T0000060;transcript_name=hg002_chrY_paternal_15.1;gene_name=LOC124905238;ID=exon:HG03009_ch_T0000060:1;Name=LOC124905238;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	1114974	1115005	.	+	.	source_gene_common_name=MIR3690;source_gene=hg002_chrY_paternal_16;alternative_source_transcripts=hg002_chrY_paternal_16.1,hg002_chrY_paternal_16.1;gene_id=HG03009_ch_G0000011;gene_biotype=miRNA;gene_name=MIR3690;gene_sources=liftoff;ID=HG03009_ch_G0000011;Name=MIR3690
HG03009_chrY	CAT	transcript	1114974	1115048	1000	+	.	source_transcript=hg002_chrY_paternal_16.1;source_transcript_name=hg002_chrY_paternal_16.1;source_gene=hg002_chrY_paternal_16;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_16;gene_biotype=miRNA;transcript_biotype=primary_transcript;alignment_id=hg002_chrY_paternal_16.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_16.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR3690;alternative_source_transcripts=hg002_chrY_paternal_16.1,hg002_chrY_paternal_16.1;transcript_id=HG03009_ch_T0000061;gene_id=HG03009_ch_G0000011;Parent=HG03009_ch_G0000011;transcript_name=hg002_chrY_paternal_16.1;gene_name=MIR3690;ID=HG03009_ch_T0000061;Name=MIR3690
HG03009_chrY	CAT	exon	1114974	1115048	.	+	.	source_transcript=hg002_chrY_paternal_16.1;source_transcript_name=hg002_chrY_paternal_16.1;source_gene=hg002_chrY_paternal_16;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_16;gene_biotype=miRNA;transcript_biotype=primary_transcript;alignment_id=hg002_chrY_paternal_16.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_16.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR3690;alternative_source_transcripts=hg002_chrY_paternal_16.1,hg002_chrY_paternal_16.1;transcript_id=HG03009_ch_T0000061;gene_id=HG03009_ch_G0000011;Parent=HG03009_ch_T0000061;transcript_name=hg002_chrY_paternal_16.1;gene_name=MIR3690;ID=exon:HG03009_ch_T0000061:0;Name=MIR3690;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	1114983	1115005	1000	+	.	source_transcript=hg002_chrY_paternal_16.2;source_transcript_name=hg002_chrY_paternal_16.1;source_gene=hg002_chrY_paternal_16;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_16;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=hg002_chrY_paternal_16.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_16.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR3690;alternative_source_transcripts=hg002_chrY_paternal_16.2,hg002_chrY_paternal_16.2;transcript_id=HG03009_ch_T0000062;gene_id=HG03009_ch_G0000011;Parent=HG03009_ch_G0000011;transcript_name=hg002_chrY_paternal_16.1;gene_name=MIR3690;ID=HG03009_ch_T0000062;Name=MIR3690
HG03009_chrY	CAT	exon	1114983	1115005	.	+	.	source_transcript=hg002_chrY_paternal_16.2;source_transcript_name=hg002_chrY_paternal_16.1;source_gene=hg002_chrY_paternal_16;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_16;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=hg002_chrY_paternal_16.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_16.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR3690;alternative_source_transcripts=hg002_chrY_paternal_16.2,hg002_chrY_paternal_16.2;transcript_id=HG03009_ch_T0000062;gene_id=HG03009_ch_G0000011;Parent=HG03009_ch_T0000062;transcript_name=hg002_chrY_paternal_16.1;gene_name=MIR3690;ID=exon:HG03009_ch_T0000062:0;Name=MIR3690;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	1115277	1115308	.	+	.	source_gene_common_name=MIR3690;source_gene=hg002_chrY_paternal_17;alternative_source_transcripts=hg002_chrY_paternal_17.1,hg002_chrY_paternal_17.1;gene_id=HG03009_ch_G0000012;gene_biotype=miRNA;gene_name=MIR3690;gene_sources=liftoff;ID=HG03009_ch_G0000012;Name=MIR3690
HG03009_chrY	CAT	transcript	1115277	1115351	1000	+	.	source_transcript=hg002_chrY_paternal_17.1;source_transcript_name=hg002_chrY_paternal_17.1;source_gene=hg002_chrY_paternal_17;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_17;gene_biotype=miRNA;transcript_biotype=primary_transcript;alignment_id=hg002_chrY_paternal_17.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_17.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR3690;alternative_source_transcripts=hg002_chrY_paternal_17.1,hg002_chrY_paternal_17.1;transcript_id=HG03009_ch_T0000063;gene_id=HG03009_ch_G0000012;Parent=HG03009_ch_G0000012;transcript_name=hg002_chrY_paternal_17.1;gene_name=MIR3690;ID=HG03009_ch_T0000063;Name=MIR3690
HG03009_chrY	CAT	exon	1115277	1115351	.	+	.	source_transcript=hg002_chrY_paternal_17.1;source_transcript_name=hg002_chrY_paternal_17.1;source_gene=hg002_chrY_paternal_17;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_17;gene_biotype=miRNA;transcript_biotype=primary_transcript;alignment_id=hg002_chrY_paternal_17.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_17.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR3690;alternative_source_transcripts=hg002_chrY_paternal_17.1,hg002_chrY_paternal_17.1;transcript_id=HG03009_ch_T0000063;gene_id=HG03009_ch_G0000012;Parent=HG03009_ch_T0000063;transcript_name=hg002_chrY_paternal_17.1;gene_name=MIR3690;ID=exon:HG03009_ch_T0000063:0;Name=MIR3690;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	1115286	1115308	1000	+	.	source_transcript=hg002_chrY_paternal_17.2;source_transcript_name=hg002_chrY_paternal_17.1;source_gene=hg002_chrY_paternal_17;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_17;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=hg002_chrY_paternal_17.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_17.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR3690;alternative_source_transcripts=hg002_chrY_paternal_17.2,hg002_chrY_paternal_17.2;transcript_id=HG03009_ch_T0000064;gene_id=HG03009_ch_G0000012;Parent=HG03009_ch_G0000012;transcript_name=hg002_chrY_paternal_17.1;gene_name=MIR3690;ID=HG03009_ch_T0000064;Name=MIR3690
HG03009_chrY	CAT	exon	1115286	1115308	.	+	.	source_transcript=hg002_chrY_paternal_17.2;source_transcript_name=hg002_chrY_paternal_17.1;source_gene=hg002_chrY_paternal_17;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_17;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=hg002_chrY_paternal_17.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_17.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR3690;alternative_source_transcripts=hg002_chrY_paternal_17.2,hg002_chrY_paternal_17.2;transcript_id=HG03009_ch_T0000064;gene_id=HG03009_ch_G0000012;Parent=HG03009_ch_T0000064;transcript_name=hg002_chrY_paternal_17.1;gene_name=MIR3690;ID=exon:HG03009_ch_T0000064:0;Name=MIR3690;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	1115580	1115611	.	+	.	source_gene_common_name=MIR3690;source_gene=hg002_chrY_paternal_18;alternative_source_transcripts=hg002_chrY_paternal_18.1,hg002_chrY_paternal_18.1;gene_id=HG03009_ch_G0000013;gene_biotype=miRNA;gene_name=MIR3690;gene_sources=liftoff;ID=HG03009_ch_G0000013;Name=MIR3690
HG03009_chrY	CAT	transcript	1115580	1115654	1000	+	.	source_transcript=hg002_chrY_paternal_18.1;source_transcript_name=hg002_chrY_paternal_18.1;source_gene=hg002_chrY_paternal_18;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_18;gene_biotype=miRNA;transcript_biotype=primary_transcript;alignment_id=hg002_chrY_paternal_18.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_18.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR3690;alternative_source_transcripts=hg002_chrY_paternal_18.1,hg002_chrY_paternal_18.1;transcript_id=HG03009_ch_T0000065;gene_id=HG03009_ch_G0000013;Parent=HG03009_ch_G0000013;transcript_name=hg002_chrY_paternal_18.1;gene_name=MIR3690;ID=HG03009_ch_T0000065;Name=MIR3690
HG03009_chrY	CAT	exon	1115580	1115654	.	+	.	source_transcript=hg002_chrY_paternal_18.1;source_transcript_name=hg002_chrY_paternal_18.1;source_gene=hg002_chrY_paternal_18;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_18;gene_biotype=miRNA;transcript_biotype=primary_transcript;alignment_id=hg002_chrY_paternal_18.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_18.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR3690;alternative_source_transcripts=hg002_chrY_paternal_18.1,hg002_chrY_paternal_18.1;transcript_id=HG03009_ch_T0000065;gene_id=HG03009_ch_G0000013;Parent=HG03009_ch_T0000065;transcript_name=hg002_chrY_paternal_18.1;gene_name=MIR3690;ID=exon:HG03009_ch_T0000065:0;Name=MIR3690;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	1115589	1115611	1000	+	.	source_transcript=hg002_chrY_paternal_18.2;source_transcript_name=hg002_chrY_paternal_18.1;source_gene=hg002_chrY_paternal_18;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_18;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=hg002_chrY_paternal_18.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_18.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR3690;alternative_source_transcripts=hg002_chrY_paternal_18.2,hg002_chrY_paternal_18.2;transcript_id=HG03009_ch_T0000066;gene_id=HG03009_ch_G0000013;Parent=HG03009_ch_G0000013;transcript_name=hg002_chrY_paternal_18.1;gene_name=MIR3690;ID=HG03009_ch_T0000066;Name=MIR3690
HG03009_chrY	CAT	exon	1115589	1115611	.	+	.	source_transcript=hg002_chrY_paternal_18.2;source_transcript_name=hg002_chrY_paternal_18.1;source_gene=hg002_chrY_paternal_18;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_18;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=hg002_chrY_paternal_18.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_18.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR3690;alternative_source_transcripts=hg002_chrY_paternal_18.2,hg002_chrY_paternal_18.2;transcript_id=HG03009_ch_T0000066;gene_id=HG03009_ch_G0000013;Parent=HG03009_ch_T0000066;transcript_name=hg002_chrY_paternal_18.1;gene_name=MIR3690;ID=exon:HG03009_ch_T0000066:0;Name=MIR3690;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	1162763	1202211	.	+	.	source_gene_common_name=IL3RA;source_gene=hg002_chrY_paternal_20;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;gene_id=HG03009_ch_G0000014;gene_biotype=protein_coding;gene_name=IL3RA;gene_sources=liftoff,augTM;ID=HG03009_ch_G0000014;Name=IL3RA
HG03009_chrY	CAT	transcript	1162763	1202211	100	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000067;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_G0000014;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=HG03009_ch_T0000067;Name=IL3RA
HG03009_chrY	CAT	exon	1162763	1162904	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000067;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000067;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03009_ch_T0000067:0;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1162905	1167854	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000067;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000067;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03009_ch_T0000067:0;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1167855	1167956	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000067;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000067;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03009_ch_T0000067:1;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1167893	1167956	.	+	0	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000067;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000067;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03009_ch_T0000067:0;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	1167893	1167895	.	+	0	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000067;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000067;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=start_codon:HG03009_ch_T0000067;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1167957	1178222	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000067;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000067;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03009_ch_T0000067:1;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1178223	1178355	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000067;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000067;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03009_ch_T0000067:2;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1178223	1178355	.	+	2	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000067;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000067;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03009_ch_T0000067:1;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1178356	1178444	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000067;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000067;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03009_ch_T0000067:2;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1178445	1178629	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000067;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000067;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03009_ch_T0000067:3;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1178445	1178629	.	+	1	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000067;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000067;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03009_ch_T0000067:2;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1178630	1182284	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000067;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000067;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03009_ch_T0000067:3;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1182285	1182400	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000067;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000067;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03009_ch_T0000067:4;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1182285	1182400	.	+	2	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000067;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000067;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03009_ch_T0000067:3;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1182401	1184924	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000067;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000067;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03009_ch_T0000067:4;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1184925	1184951	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000067;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000067;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03009_ch_T0000067:5;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1184925	1184951	.	+	0	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000067;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000067;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03009_ch_T0000067:4;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1184952	1191298	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000067;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000067;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03009_ch_T0000067:5;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1191299	1191413	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000067;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000067;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03009_ch_T0000067:6;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1191299	1191413	.	+	0	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000067;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000067;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03009_ch_T0000067:5;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1191414	1198117	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000067;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000067;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03009_ch_T0000067:6;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1198118	1198223	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000067;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000067;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03009_ch_T0000067:7;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1198118	1198223	.	+	2	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000067;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000067;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03009_ch_T0000067:6;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1198224	1200501	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000067;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000067;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03009_ch_T0000067:7;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1200502	1200583	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000067;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000067;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03009_ch_T0000067:8;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1200502	1200583	.	+	1	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000067;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000067;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03009_ch_T0000067:7;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1200584	1201911	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000067;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000067;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03009_ch_T0000067:8;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1201912	1202211	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000067;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000067;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03009_ch_T0000067:9;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1201912	1201986	.	+	0	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000067;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000067;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03009_ch_T0000067:8;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	1201984	1201986	.	+	0	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000067;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000067;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=stop_codon:HG03009_ch_T0000067;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	1162763	1202211	100	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000068;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_G0000014;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=HG03009_ch_T0000068;Name=IL3RA
HG03009_chrY	CAT	exon	1162763	1162904	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000068;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000068;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03009_ch_T0000068:0;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1162905	1167854	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000068;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000068;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03009_ch_T0000068:0;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1167855	1167956	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000068;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000068;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03009_ch_T0000068:1;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1167893	1167956	.	+	0	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000068;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000068;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03009_ch_T0000068:0;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	1167893	1167895	.	+	0	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000068;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000068;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=start_codon:HG03009_ch_T0000068;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1167957	1171441	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000068;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000068;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03009_ch_T0000068:1;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1171442	1171560	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000068;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000068;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03009_ch_T0000068:2;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1171442	1171560	.	+	2	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000068;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000068;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03009_ch_T0000068:1;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1171561	1174556	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000068;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000068;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03009_ch_T0000068:2;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1174557	1174671	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000068;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000068;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03009_ch_T0000068:3;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1174557	1174671	.	+	0	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000068;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000068;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03009_ch_T0000068:2;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1174672	1178222	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000068;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000068;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03009_ch_T0000068:3;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1178223	1178355	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000068;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000068;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03009_ch_T0000068:4;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1178223	1178355	.	+	2	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000068;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000068;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03009_ch_T0000068:3;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1178356	1178444	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000068;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000068;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03009_ch_T0000068:4;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1178445	1178629	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000068;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000068;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03009_ch_T0000068:5;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1178445	1178629	.	+	1	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000068;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000068;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03009_ch_T0000068:4;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1178630	1182284	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000068;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000068;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03009_ch_T0000068:5;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1182285	1182400	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000068;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000068;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03009_ch_T0000068:6;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1182285	1182400	.	+	2	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000068;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000068;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03009_ch_T0000068:5;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1182401	1184924	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000068;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000068;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03009_ch_T0000068:6;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1184925	1184951	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000068;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000068;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03009_ch_T0000068:7;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1184925	1184951	.	+	0	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000068;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000068;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03009_ch_T0000068:6;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1184952	1191298	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000068;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000068;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03009_ch_T0000068:7;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1191299	1191413	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000068;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000068;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03009_ch_T0000068:8;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1191299	1191413	.	+	0	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000068;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000068;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03009_ch_T0000068:7;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1191414	1198117	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000068;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000068;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03009_ch_T0000068:8;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1198118	1198223	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000068;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000068;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03009_ch_T0000068:9;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1198118	1198223	.	+	2	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000068;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000068;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03009_ch_T0000068:8;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1198224	1200501	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000068;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000068;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03009_ch_T0000068:9;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1200502	1200583	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000068;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000068;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03009_ch_T0000068:10;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1200502	1200583	.	+	1	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000068;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000068;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03009_ch_T0000068:9;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1200584	1201911	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000068;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000068;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03009_ch_T0000068:10;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1201912	1202211	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000068;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000068;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03009_ch_T0000068:11;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1201912	1201986	.	+	0	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000068;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000068;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03009_ch_T0000068:10;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	1201984	1201986	.	+	0	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000068;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000068;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=stop_codon:HG03009_ch_T0000068;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	1162763	1202211	100	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000069;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_G0000014;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=HG03009_ch_T0000069;Name=IL3RA
HG03009_chrY	CAT	exon	1162763	1162904	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000069;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000069;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03009_ch_T0000069:0;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1162905	1167857	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000069;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000069;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03009_ch_T0000069:0;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1167858	1167956	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000069;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000069;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03009_ch_T0000069:1;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1167893	1167956	.	+	0	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000069;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000069;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03009_ch_T0000069:0;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	1167893	1167895	.	+	0	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000069;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000069;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=start_codon:HG03009_ch_T0000069;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1167957	1171441	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000069;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000069;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03009_ch_T0000069:1;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1171442	1171560	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000069;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000069;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03009_ch_T0000069:2;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1171442	1171560	.	+	2	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000069;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000069;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03009_ch_T0000069:1;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1171561	1174556	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000069;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000069;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03009_ch_T0000069:2;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1174557	1174671	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000069;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000069;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03009_ch_T0000069:3;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1174557	1174671	.	+	0	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000069;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000069;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03009_ch_T0000069:2;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1174672	1178222	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000069;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000069;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03009_ch_T0000069:3;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1178223	1178355	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000069;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000069;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03009_ch_T0000069:4;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1178223	1178355	.	+	2	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000069;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000069;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03009_ch_T0000069:3;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1178356	1178444	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000069;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000069;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03009_ch_T0000069:4;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1178445	1178629	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000069;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000069;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03009_ch_T0000069:5;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1178445	1178629	.	+	1	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000069;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000069;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03009_ch_T0000069:4;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1178630	1182284	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000069;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000069;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03009_ch_T0000069:5;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1182285	1182400	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000069;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000069;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03009_ch_T0000069:6;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1182285	1182400	.	+	2	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000069;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000069;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03009_ch_T0000069:5;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1182401	1184924	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000069;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000069;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03009_ch_T0000069:6;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1184925	1184951	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000069;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000069;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03009_ch_T0000069:7;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1184925	1184951	.	+	0	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000069;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000069;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03009_ch_T0000069:6;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1184952	1191298	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000069;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000069;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03009_ch_T0000069:7;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1191299	1191413	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000069;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000069;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03009_ch_T0000069:8;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1191299	1191413	.	+	0	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000069;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000069;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03009_ch_T0000069:7;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1191414	1198117	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000069;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000069;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03009_ch_T0000069:8;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1198118	1198223	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000069;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000069;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03009_ch_T0000069:9;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1198118	1198223	.	+	2	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000069;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000069;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03009_ch_T0000069:8;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1198224	1200501	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000069;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000069;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03009_ch_T0000069:9;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1200502	1200583	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000069;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000069;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03009_ch_T0000069:10;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1200502	1200583	.	+	1	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000069;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000069;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03009_ch_T0000069:9;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1200584	1201911	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000069;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000069;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03009_ch_T0000069:10;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1201912	1202211	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000069;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000069;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03009_ch_T0000069:11;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1201912	1201986	.	+	0	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000069;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000069;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03009_ch_T0000069:10;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	1201984	1201986	.	+	0	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000069;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000069;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=stop_codon:HG03009_ch_T0000069;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	1162763	1202211	100	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000070;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_G0000014;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=HG03009_ch_T0000070;Name=IL3RA
HG03009_chrY	CAT	exon	1162763	1162904	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000070;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000070;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03009_ch_T0000070:0;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1162905	1167854	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000070;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000070;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03009_ch_T0000070:0;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1167855	1167956	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000070;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000070;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03009_ch_T0000070:1;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1167893	1167956	.	+	0	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000070;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000070;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03009_ch_T0000070:0;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	1167893	1167895	.	+	0	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000070;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000070;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=start_codon:HG03009_ch_T0000070;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1167957	1171441	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000070;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000070;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03009_ch_T0000070:1;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1171442	1171560	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000070;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000070;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03009_ch_T0000070:2;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1171442	1171560	.	+	2	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000070;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000070;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03009_ch_T0000070:1;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1171561	1174556	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000070;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000070;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03009_ch_T0000070:2;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1174557	1174671	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000070;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000070;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03009_ch_T0000070:3;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1174557	1174671	.	+	0	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000070;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000070;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03009_ch_T0000070:2;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1174672	1178222	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000070;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000070;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03009_ch_T0000070:3;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1178223	1178355	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000070;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000070;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03009_ch_T0000070:4;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1178223	1178355	.	+	2	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000070;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000070;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03009_ch_T0000070:3;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1178356	1178447	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000070;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000070;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03009_ch_T0000070:4;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1178448	1178629	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000070;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000070;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03009_ch_T0000070:5;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1178448	1178629	.	+	1	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000070;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000070;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03009_ch_T0000070:4;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1178630	1182284	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000070;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000070;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03009_ch_T0000070:5;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1182285	1182400	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000070;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000070;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03009_ch_T0000070:6;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1182285	1182400	.	+	2	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000070;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000070;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03009_ch_T0000070:5;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1182401	1184924	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000070;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000070;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03009_ch_T0000070:6;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1184925	1184951	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000070;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000070;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03009_ch_T0000070:7;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1184925	1184951	.	+	0	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000070;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000070;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03009_ch_T0000070:6;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1184952	1191298	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000070;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000070;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03009_ch_T0000070:7;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1191299	1191413	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000070;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000070;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03009_ch_T0000070:8;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1191299	1191413	.	+	0	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000070;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000070;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03009_ch_T0000070:7;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1191414	1198117	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000070;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000070;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03009_ch_T0000070:8;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1198118	1198223	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000070;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000070;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03009_ch_T0000070:9;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1198118	1198223	.	+	2	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000070;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000070;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03009_ch_T0000070:8;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1198224	1200501	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000070;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000070;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03009_ch_T0000070:9;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1200502	1200583	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000070;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000070;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03009_ch_T0000070:10;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1200502	1200583	.	+	1	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000070;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000070;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03009_ch_T0000070:9;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1200584	1201911	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000070;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000070;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03009_ch_T0000070:10;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1201912	1202211	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000070;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000070;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03009_ch_T0000070:11;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1201912	1201986	.	+	0	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000070;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000070;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03009_ch_T0000070:10;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	1201984	1201986	.	+	0	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000070;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000070;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=stop_codon:HG03009_ch_T0000070;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	1162763	1202211	100	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000071;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_G0000014;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=HG03009_ch_T0000071;Name=IL3RA
HG03009_chrY	CAT	exon	1162763	1162904	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000071;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000071;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03009_ch_T0000071:0;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1162905	1167857	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000071;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000071;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03009_ch_T0000071:0;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1167858	1167956	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000071;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000071;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03009_ch_T0000071:1;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1167893	1167956	.	+	0	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000071;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000071;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03009_ch_T0000071:0;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	1167893	1167895	.	+	0	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000071;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000071;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=start_codon:HG03009_ch_T0000071;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1167957	1171441	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000071;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000071;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03009_ch_T0000071:1;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1171442	1171560	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000071;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000071;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03009_ch_T0000071:2;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1171442	1171560	.	+	2	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000071;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000071;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03009_ch_T0000071:1;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1171561	1174556	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000071;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000071;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03009_ch_T0000071:2;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1174557	1174671	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000071;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000071;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03009_ch_T0000071:3;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1174557	1174671	.	+	0	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000071;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000071;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03009_ch_T0000071:2;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1174672	1178222	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000071;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000071;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03009_ch_T0000071:3;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1178223	1178355	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000071;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000071;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03009_ch_T0000071:4;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1178223	1178355	.	+	2	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000071;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000071;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03009_ch_T0000071:3;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1178356	1178447	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000071;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000071;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03009_ch_T0000071:4;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1178448	1178629	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000071;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000071;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03009_ch_T0000071:5;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1178448	1178629	.	+	1	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000071;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000071;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03009_ch_T0000071:4;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1178630	1182284	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000071;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000071;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03009_ch_T0000071:5;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1182285	1182400	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000071;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000071;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03009_ch_T0000071:6;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1182285	1182400	.	+	2	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000071;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000071;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03009_ch_T0000071:5;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1182401	1184924	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000071;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000071;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03009_ch_T0000071:6;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1184925	1184951	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000071;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000071;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03009_ch_T0000071:7;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1184925	1184951	.	+	0	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000071;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000071;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03009_ch_T0000071:6;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1184952	1191298	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000071;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000071;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03009_ch_T0000071:7;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1191299	1191413	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000071;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000071;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03009_ch_T0000071:8;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1191299	1191413	.	+	0	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000071;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000071;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03009_ch_T0000071:7;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1191414	1198117	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000071;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000071;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03009_ch_T0000071:8;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1198118	1198223	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000071;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000071;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03009_ch_T0000071:9;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1198118	1198223	.	+	2	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000071;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000071;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03009_ch_T0000071:8;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1198224	1200501	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000071;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000071;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03009_ch_T0000071:9;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1200502	1200583	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000071;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000071;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03009_ch_T0000071:10;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1200502	1200583	.	+	1	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000071;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000071;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03009_ch_T0000071:9;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1200584	1201911	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000071;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000071;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03009_ch_T0000071:10;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1201912	1202211	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000071;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000071;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03009_ch_T0000071:11;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1201912	1201986	.	+	0	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000071;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000071;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03009_ch_T0000071:10;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	1201984	1201986	.	+	0	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000071;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000071;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=stop_codon:HG03009_ch_T0000071;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	1167709	1202211	100	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000085;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_G0000014;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=HG03009_ch_T0000085;Name=IL3RA
HG03009_chrY	CAT	exon	1167709	1167956	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000085;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000085;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03009_ch_T0000085:0;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1167713	1167956	.	+	0	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000085;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000085;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03009_ch_T0000085:0;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	1167713	1167715	.	+	0	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000085;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000085;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=start_codon:HG03009_ch_T0000085;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1167957	1171441	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000085;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000085;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03009_ch_T0000085:0;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1171442	1171560	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000085;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000085;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03009_ch_T0000085:1;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1171442	1171560	.	+	2	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000085;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000085;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03009_ch_T0000085:1;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1171561	1174556	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000085;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000085;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03009_ch_T0000085:1;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1174557	1174671	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000085;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000085;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03009_ch_T0000085:2;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1174557	1174671	.	+	0	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000085;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000085;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03009_ch_T0000085:2;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1174672	1178222	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000085;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000085;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03009_ch_T0000085:2;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1178223	1178355	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000085;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000085;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03009_ch_T0000085:3;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1178223	1178355	.	+	2	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000085;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000085;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03009_ch_T0000085:3;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1178356	1178444	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000085;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000085;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03009_ch_T0000085:3;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1178445	1178629	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000085;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000085;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03009_ch_T0000085:4;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1178445	1178629	.	+	1	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000085;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000085;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03009_ch_T0000085:4;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1178630	1182284	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000085;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000085;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03009_ch_T0000085:4;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1182285	1182400	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000085;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000085;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03009_ch_T0000085:5;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1182285	1182400	.	+	2	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000085;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000085;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03009_ch_T0000085:5;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1182401	1184924	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000085;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000085;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03009_ch_T0000085:5;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1184925	1184951	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000085;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000085;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03009_ch_T0000085:6;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1184925	1184951	.	+	0	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000085;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000085;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03009_ch_T0000085:6;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1184952	1191298	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000085;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000085;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03009_ch_T0000085:6;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1191299	1191413	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000085;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000085;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03009_ch_T0000085:7;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1191299	1191413	.	+	0	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000085;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000085;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03009_ch_T0000085:7;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1191414	1198117	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000085;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000085;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03009_ch_T0000085:7;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1198118	1198223	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000085;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000085;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03009_ch_T0000085:8;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1198118	1198223	.	+	2	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000085;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000085;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03009_ch_T0000085:8;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1198224	1200501	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000085;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000085;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03009_ch_T0000085:8;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1200502	1200583	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000085;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000085;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03009_ch_T0000085:9;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1200502	1200583	.	+	1	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000085;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000085;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03009_ch_T0000085:9;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1200584	1201911	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000085;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000085;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03009_ch_T0000085:9;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1201912	1202211	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000085;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000085;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03009_ch_T0000085:10;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1201912	1201986	.	+	0	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000085;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000085;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03009_ch_T0000085:10;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	1201984	1201986	.	+	0	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000085;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000085;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=stop_codon:HG03009_ch_T0000085;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	1167709	1202211	100	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000086;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_G0000014;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=HG03009_ch_T0000086;Name=IL3RA
HG03009_chrY	CAT	exon	1167709	1167956	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000086;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000086;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03009_ch_T0000086:0;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1167713	1167956	.	+	0	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000086;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000086;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03009_ch_T0000086:0;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	1167713	1167715	.	+	0	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000086;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000086;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=start_codon:HG03009_ch_T0000086;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1167957	1171441	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000086;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000086;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03009_ch_T0000086:0;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1171442	1171560	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000086;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000086;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03009_ch_T0000086:1;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1171442	1171560	.	+	2	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000086;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000086;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03009_ch_T0000086:1;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1171561	1174556	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000086;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000086;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03009_ch_T0000086:1;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1174557	1174671	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000086;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000086;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03009_ch_T0000086:2;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1174557	1174671	.	+	0	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000086;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000086;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03009_ch_T0000086:2;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1174672	1178222	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000086;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000086;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03009_ch_T0000086:2;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1178223	1178355	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000086;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000086;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03009_ch_T0000086:3;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1178223	1178355	.	+	2	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000086;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000086;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03009_ch_T0000086:3;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1178356	1178447	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000086;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000086;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03009_ch_T0000086:3;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1178448	1178629	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000086;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000086;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03009_ch_T0000086:4;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1178448	1178629	.	+	1	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000086;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000086;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03009_ch_T0000086:4;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1178630	1182284	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000086;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000086;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03009_ch_T0000086:4;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1182285	1182400	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000086;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000086;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03009_ch_T0000086:5;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1182285	1182400	.	+	2	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000086;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000086;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03009_ch_T0000086:5;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1182401	1184924	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000086;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000086;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03009_ch_T0000086:5;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1184925	1184951	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000086;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000086;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03009_ch_T0000086:6;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1184925	1184951	.	+	0	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000086;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000086;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03009_ch_T0000086:6;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1184952	1191298	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000086;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000086;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03009_ch_T0000086:6;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1191299	1191413	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000086;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000086;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03009_ch_T0000086:7;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1191299	1191413	.	+	0	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000086;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000086;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03009_ch_T0000086:7;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1191414	1198117	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000086;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000086;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03009_ch_T0000086:7;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1198118	1198223	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000086;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000086;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03009_ch_T0000086:8;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1198118	1198223	.	+	2	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000086;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000086;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03009_ch_T0000086:8;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1198224	1200501	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000086;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000086;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03009_ch_T0000086:8;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1200502	1200583	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000086;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000086;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03009_ch_T0000086:9;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1200502	1200583	.	+	1	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000086;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000086;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03009_ch_T0000086:9;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1200584	1201911	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000086;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000086;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03009_ch_T0000086:9;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1201912	1202211	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000086;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000086;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03009_ch_T0000086:10;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1201912	1201986	.	+	0	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000086;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000086;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03009_ch_T0000086:10;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	1201984	1201986	.	+	0	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000086;gene_id=HG03009_ch_G0000014;Parent=HG03009_ch_T0000086;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=stop_codon:HG03009_ch_T0000086;Name=IL3RA;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	1163552	1197935	.	-	.	source_gene_common_name=LOC101928032;source_gene=hg002_chrY_paternal_21;gene_id=HG03009_ch_G0000015;gene_biotype=lncRNA;gene_name=LOC101928032;gene_sources=liftoff,transMap,transMap_pairwise;ID=HG03009_ch_G0000015;Name=LOC101928032
HG03009_chrY	CAT	transcript	1163552	1197935	1000	-	.	source_transcript=hg002_chrY_paternal_21.10;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.10;transcript_score=279.83299999999997;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000072;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_G0000015;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=HG03009_ch_T0000072;Name=LOC101928032
HG03009_chrY	CAT	exon	1163552	1163654	.	-	.	source_transcript=hg002_chrY_paternal_21.10;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.10;transcript_score=279.83299999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000072;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000072;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000072:0;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1163655	1163776	.	-	.	source_transcript=hg002_chrY_paternal_21.10;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.10;transcript_score=279.83299999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000072;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000072;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000072:0;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1163777	1163906	.	-	.	source_transcript=hg002_chrY_paternal_21.10;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.10;transcript_score=279.83299999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000072;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000072;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000072:1;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1163907	1164028	.	-	.	source_transcript=hg002_chrY_paternal_21.10;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.10;transcript_score=279.83299999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000072;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000072;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000072:1;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1164029	1165011	.	-	.	source_transcript=hg002_chrY_paternal_21.10;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.10;transcript_score=279.83299999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000072;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000072;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000072:2;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1165012	1167724	.	-	.	source_transcript=hg002_chrY_paternal_21.10;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.10;transcript_score=279.83299999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000072;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000072;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000072:2;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1167725	1167940	.	-	.	source_transcript=hg002_chrY_paternal_21.10;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.10;transcript_score=279.83299999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000072;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000072;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000072:3;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1167941	1178432	.	-	.	source_transcript=hg002_chrY_paternal_21.10;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.10;transcript_score=279.83299999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000072;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000072;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000072:3;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1178433	1178594	.	-	.	source_transcript=hg002_chrY_paternal_21.10;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.10;transcript_score=279.83299999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000072;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000072;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000072:4;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1178595	1178742	.	-	.	source_transcript=hg002_chrY_paternal_21.10;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.10;transcript_score=279.83299999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000072;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000072;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000072:4;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1178743	1178841	.	-	.	source_transcript=hg002_chrY_paternal_21.10;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.10;transcript_score=279.83299999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000072;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000072;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000072:5;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1178842	1181635	.	-	.	source_transcript=hg002_chrY_paternal_21.10;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.10;transcript_score=279.83299999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000072;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000072;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000072:5;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1181636	1182204	.	-	.	source_transcript=hg002_chrY_paternal_21.10;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.10;transcript_score=279.83299999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000072;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000072;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000072:6;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1182205	1187528	.	-	.	source_transcript=hg002_chrY_paternal_21.10;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.10;transcript_score=279.83299999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000072;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000072;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000072:6;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1187529	1187907	.	-	.	source_transcript=hg002_chrY_paternal_21.10;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.10;transcript_score=279.83299999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000072;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000072;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000072:7;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1187908	1191263	.	-	.	source_transcript=hg002_chrY_paternal_21.10;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.10;transcript_score=279.83299999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000072;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000072;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000072:7;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1191264	1191332	.	-	.	source_transcript=hg002_chrY_paternal_21.10;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.10;transcript_score=279.83299999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000072;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000072;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000072:8;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1191333	1193929	.	-	.	source_transcript=hg002_chrY_paternal_21.10;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.10;transcript_score=279.83299999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000072;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000072;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000072:8;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1193930	1194064	.	-	.	source_transcript=hg002_chrY_paternal_21.10;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.10;transcript_score=279.83299999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000072;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000072;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000072:9;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1194065	1197780	.	-	.	source_transcript=hg002_chrY_paternal_21.10;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.10;transcript_score=279.83299999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000072;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000072;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000072:9;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1197781	1197935	.	-	.	source_transcript=hg002_chrY_paternal_21.10;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.10;transcript_score=279.83299999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000072;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000072;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000072:10;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	1163552	1197935	1000	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=277.61477777777776;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000073;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_G0000015;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=HG03009_ch_T0000073;Name=LOC101928032
HG03009_chrY	CAT	exon	1163552	1163654	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=277.61477777777776;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000073;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000073;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000073:0;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1163655	1163776	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=277.61477777777776;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000073;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000073;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000073:0;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1163777	1163906	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=277.61477777777776;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000073;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000073;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000073:1;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1163907	1164028	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=277.61477777777776;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000073;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000073;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000073:1;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1164029	1165011	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=277.61477777777776;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000073;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000073;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000073:2;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1165012	1167724	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=277.61477777777776;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000073;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000073;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000073:2;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1167725	1167940	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=277.61477777777776;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000073;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000073;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000073:3;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1167941	1178432	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=277.61477777777776;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000073;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000073;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000073:3;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1178433	1178841	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=277.61477777777776;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000073;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000073;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000073:4;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1178842	1181635	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=277.61477777777776;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000073;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000073;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000073:4;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1181636	1182204	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=277.61477777777776;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000073;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000073;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000073:5;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1182205	1187528	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=277.61477777777776;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000073;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000073;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000073:5;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1187529	1187907	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=277.61477777777776;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000073;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000073;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000073:6;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1187908	1191263	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=277.61477777777776;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000073;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000073;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000073:6;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1191264	1191332	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=277.61477777777776;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000073;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000073;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000073:7;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1191333	1193929	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=277.61477777777776;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000073;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000073;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000073:7;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1193930	1194064	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=277.61477777777776;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000073;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000073;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000073:8;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1194065	1197780	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=277.61477777777776;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000073;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000073;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000073:8;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1197781	1197935	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=277.61477777777776;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000073;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000073;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000073:9;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	1163552	1197935	1000	-	.	source_transcript=hg002_chrY_paternal_21.12;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.12;transcript_score=279.834;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000074;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_G0000015;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=HG03009_ch_T0000074;Name=LOC101928032
HG03009_chrY	CAT	exon	1163552	1163654	.	-	.	source_transcript=hg002_chrY_paternal_21.12;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.12;transcript_score=279.834;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000074;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000074;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000074:0;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1163655	1163776	.	-	.	source_transcript=hg002_chrY_paternal_21.12;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.12;transcript_score=279.834;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000074;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000074;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000074:0;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1163777	1163906	.	-	.	source_transcript=hg002_chrY_paternal_21.12;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.12;transcript_score=279.834;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000074;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000074;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000074:1;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1163907	1164028	.	-	.	source_transcript=hg002_chrY_paternal_21.12;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.12;transcript_score=279.834;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000074;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000074;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000074:1;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1164029	1165011	.	-	.	source_transcript=hg002_chrY_paternal_21.12;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.12;transcript_score=279.834;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000074;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000074;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000074:2;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1165012	1167724	.	-	.	source_transcript=hg002_chrY_paternal_21.12;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.12;transcript_score=279.834;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000074;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000074;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000074:2;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1167725	1167940	.	-	.	source_transcript=hg002_chrY_paternal_21.12;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.12;transcript_score=279.834;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000074;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000074;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000074:3;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1167941	1178432	.	-	.	source_transcript=hg002_chrY_paternal_21.12;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.12;transcript_score=279.834;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000074;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000074;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000074:3;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1178433	1178594	.	-	.	source_transcript=hg002_chrY_paternal_21.12;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.12;transcript_score=279.834;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000074;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000074;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000074:4;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1178595	1178742	.	-	.	source_transcript=hg002_chrY_paternal_21.12;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.12;transcript_score=279.834;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000074;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000074;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000074:4;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1178743	1178841	.	-	.	source_transcript=hg002_chrY_paternal_21.12;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.12;transcript_score=279.834;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000074;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000074;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000074:5;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1178842	1181635	.	-	.	source_transcript=hg002_chrY_paternal_21.12;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.12;transcript_score=279.834;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000074;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000074;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000074:5;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1181636	1182204	.	-	.	source_transcript=hg002_chrY_paternal_21.12;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.12;transcript_score=279.834;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000074;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000074;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000074:6;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1182205	1187528	.	-	.	source_transcript=hg002_chrY_paternal_21.12;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.12;transcript_score=279.834;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000074;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000074;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000074:6;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1187529	1187907	.	-	.	source_transcript=hg002_chrY_paternal_21.12;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.12;transcript_score=279.834;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000074;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000074;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000074:7;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1187908	1191263	.	-	.	source_transcript=hg002_chrY_paternal_21.12;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.12;transcript_score=279.834;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000074;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000074;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000074:7;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1191264	1191332	.	-	.	source_transcript=hg002_chrY_paternal_21.12;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.12;transcript_score=279.834;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000074;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000074;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000074:8;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1191333	1193912	.	-	.	source_transcript=hg002_chrY_paternal_21.12;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.12;transcript_score=279.834;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000074;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000074;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000074:8;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1193913	1194064	.	-	.	source_transcript=hg002_chrY_paternal_21.12;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.12;transcript_score=279.834;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000074;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000074;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000074:9;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1194065	1197780	.	-	.	source_transcript=hg002_chrY_paternal_21.12;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.12;transcript_score=279.834;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000074;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000074;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000074:9;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1197781	1197935	.	-	.	source_transcript=hg002_chrY_paternal_21.12;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.12;transcript_score=279.834;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000074;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000074;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000074:10;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	1163552	1197935	1000	-	.	source_transcript=hg002_chrY_paternal_21.13;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.13;transcript_score=274.882;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000075;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_G0000015;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=HG03009_ch_T0000075;Name=LOC101928032
HG03009_chrY	CAT	exon	1163552	1163654	.	-	.	source_transcript=hg002_chrY_paternal_21.13;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.13;transcript_score=274.882;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000075;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000075;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000075:0;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1163655	1163776	.	-	.	source_transcript=hg002_chrY_paternal_21.13;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.13;transcript_score=274.882;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000075;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000075;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000075:0;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1163777	1163906	.	-	.	source_transcript=hg002_chrY_paternal_21.13;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.13;transcript_score=274.882;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000075;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000075;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000075:1;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1163907	1164028	.	-	.	source_transcript=hg002_chrY_paternal_21.13;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.13;transcript_score=274.882;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000075;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000075;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000075:1;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1164029	1165011	.	-	.	source_transcript=hg002_chrY_paternal_21.13;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.13;transcript_score=274.882;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000075;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000075;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000075:2;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1165012	1167724	.	-	.	source_transcript=hg002_chrY_paternal_21.13;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.13;transcript_score=274.882;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000075;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000075;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000075:2;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1167725	1167940	.	-	.	source_transcript=hg002_chrY_paternal_21.13;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.13;transcript_score=274.882;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000075;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000075;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000075:3;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1167941	1178432	.	-	.	source_transcript=hg002_chrY_paternal_21.13;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.13;transcript_score=274.882;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000075;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000075;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000075:3;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1178433	1178594	.	-	.	source_transcript=hg002_chrY_paternal_21.13;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.13;transcript_score=274.882;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000075;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000075;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000075:4;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1178595	1178742	.	-	.	source_transcript=hg002_chrY_paternal_21.13;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.13;transcript_score=274.882;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000075;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000075;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000075:4;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1178743	1178841	.	-	.	source_transcript=hg002_chrY_paternal_21.13;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.13;transcript_score=274.882;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000075;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000075;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000075:5;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1178842	1181635	.	-	.	source_transcript=hg002_chrY_paternal_21.13;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.13;transcript_score=274.882;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000075;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000075;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000075:5;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1181636	1182204	.	-	.	source_transcript=hg002_chrY_paternal_21.13;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.13;transcript_score=274.882;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000075;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000075;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000075:6;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1182205	1193929	.	-	.	source_transcript=hg002_chrY_paternal_21.13;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.13;transcript_score=274.882;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000075;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000075;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000075:6;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1193930	1194064	.	-	.	source_transcript=hg002_chrY_paternal_21.13;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.13;transcript_score=274.882;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000075;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000075;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000075:7;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1194065	1197780	.	-	.	source_transcript=hg002_chrY_paternal_21.13;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.13;transcript_score=274.882;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000075;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000075;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000075:7;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1197781	1197935	.	-	.	source_transcript=hg002_chrY_paternal_21.13;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.13;transcript_score=274.882;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000075;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000075;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000075:8;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	1163552	1197935	1000	-	.	source_transcript=hg002_chrY_paternal_21.14;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.14;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.14;transcript_score=277.6637777777778;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000076;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_G0000015;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=HG03009_ch_T0000076;Name=LOC101928032
HG03009_chrY	CAT	exon	1163552	1163654	.	-	.	source_transcript=hg002_chrY_paternal_21.14;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.14;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.14;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000076;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000076;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000076:0;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1163655	1163776	.	-	.	source_transcript=hg002_chrY_paternal_21.14;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.14;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.14;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000076;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000076;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000076:0;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1163777	1163906	.	-	.	source_transcript=hg002_chrY_paternal_21.14;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.14;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.14;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000076;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000076;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000076:1;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1163907	1164028	.	-	.	source_transcript=hg002_chrY_paternal_21.14;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.14;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.14;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000076;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000076;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000076:1;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1164029	1165011	.	-	.	source_transcript=hg002_chrY_paternal_21.14;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.14;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.14;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000076;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000076;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000076:2;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1165012	1167724	.	-	.	source_transcript=hg002_chrY_paternal_21.14;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.14;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.14;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000076;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000076;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000076:2;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1167725	1167940	.	-	.	source_transcript=hg002_chrY_paternal_21.14;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.14;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.14;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000076;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000076;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000076:3;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1167941	1178432	.	-	.	source_transcript=hg002_chrY_paternal_21.14;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.14;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.14;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000076;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000076;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000076:3;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1178433	1178594	.	-	.	source_transcript=hg002_chrY_paternal_21.14;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.14;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.14;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000076;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000076;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000076:4;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1178595	1178742	.	-	.	source_transcript=hg002_chrY_paternal_21.14;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.14;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.14;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000076;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000076;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000076:4;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1178743	1178841	.	-	.	source_transcript=hg002_chrY_paternal_21.14;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.14;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.14;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000076;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000076;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000076:5;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1178842	1181635	.	-	.	source_transcript=hg002_chrY_paternal_21.14;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.14;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.14;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000076;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000076;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000076:5;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1181636	1182204	.	-	.	source_transcript=hg002_chrY_paternal_21.14;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.14;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.14;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000076;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000076;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000076:6;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1182205	1191263	.	-	.	source_transcript=hg002_chrY_paternal_21.14;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.14;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.14;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000076;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000076;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000076:6;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1191264	1191332	.	-	.	source_transcript=hg002_chrY_paternal_21.14;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.14;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.14;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000076;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000076;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000076:7;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1191333	1193929	.	-	.	source_transcript=hg002_chrY_paternal_21.14;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.14;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.14;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000076;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000076;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000076:7;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1193930	1194064	.	-	.	source_transcript=hg002_chrY_paternal_21.14;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.14;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.14;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000076;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000076;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000076:8;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1194065	1197780	.	-	.	source_transcript=hg002_chrY_paternal_21.14;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.14;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.14;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000076;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000076;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000076:8;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1197781	1197935	.	-	.	source_transcript=hg002_chrY_paternal_21.14;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.14;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.14;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000076;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000076;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000076:9;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	1163552	1185539	1000	-	.	source_transcript=hg002_chrY_paternal_21.2;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.2;transcript_score=271.32757142857145;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000077;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_G0000015;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=HG03009_ch_T0000077;Name=LOC101928032
HG03009_chrY	CAT	exon	1163552	1163654	.	-	.	source_transcript=hg002_chrY_paternal_21.2;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.2;transcript_score=271.32757142857145;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000077;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000077;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000077:0;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1163655	1163776	.	-	.	source_transcript=hg002_chrY_paternal_21.2;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.2;transcript_score=271.32757142857145;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000077;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000077;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000077:0;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1163777	1163906	.	-	.	source_transcript=hg002_chrY_paternal_21.2;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.2;transcript_score=271.32757142857145;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000077;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000077;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000077:1;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1163907	1164028	.	-	.	source_transcript=hg002_chrY_paternal_21.2;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.2;transcript_score=271.32757142857145;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000077;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000077;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000077:1;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1164029	1165011	.	-	.	source_transcript=hg002_chrY_paternal_21.2;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.2;transcript_score=271.32757142857145;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000077;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000077;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000077:2;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1165012	1167724	.	-	.	source_transcript=hg002_chrY_paternal_21.2;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.2;transcript_score=271.32757142857145;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000077;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000077;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000077:2;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1167725	1167940	.	-	.	source_transcript=hg002_chrY_paternal_21.2;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.2;transcript_score=271.32757142857145;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000077;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000077;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000077:3;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1167941	1178432	.	-	.	source_transcript=hg002_chrY_paternal_21.2;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.2;transcript_score=271.32757142857145;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000077;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000077;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000077:3;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1178433	1178594	.	-	.	source_transcript=hg002_chrY_paternal_21.2;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.2;transcript_score=271.32757142857145;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000077;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000077;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000077:4;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1178595	1178742	.	-	.	source_transcript=hg002_chrY_paternal_21.2;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.2;transcript_score=271.32757142857145;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000077;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000077;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000077:4;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1178743	1178841	.	-	.	source_transcript=hg002_chrY_paternal_21.2;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.2;transcript_score=271.32757142857145;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000077;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000077;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000077:5;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1178842	1181635	.	-	.	source_transcript=hg002_chrY_paternal_21.2;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.2;transcript_score=271.32757142857145;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000077;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000077;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000077:5;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1181636	1182204	.	-	.	source_transcript=hg002_chrY_paternal_21.2;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.2;transcript_score=271.32757142857145;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000077;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000077;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000077:6;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1182205	1184823	.	-	.	source_transcript=hg002_chrY_paternal_21.2;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.2;transcript_score=271.32757142857145;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000077;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000077;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000077:6;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1184824	1185539	.	-	.	source_transcript=hg002_chrY_paternal_21.2;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.2;transcript_score=271.32757142857145;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000077;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000077;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000077:7;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	1163552	1185539	1000	-	.	source_transcript=hg002_chrY_paternal_21.3;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.3;transcript_score=271.33457142857145;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000078;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_G0000015;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=HG03009_ch_T0000078;Name=LOC101928032
HG03009_chrY	CAT	exon	1163552	1163654	.	-	.	source_transcript=hg002_chrY_paternal_21.3;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.3;transcript_score=271.33457142857145;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000078;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000078;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000078:0;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1163655	1163776	.	-	.	source_transcript=hg002_chrY_paternal_21.3;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.3;transcript_score=271.33457142857145;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000078;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000078;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000078:0;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1163777	1163906	.	-	.	source_transcript=hg002_chrY_paternal_21.3;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.3;transcript_score=271.33457142857145;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000078;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000078;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000078:1;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1163907	1164028	.	-	.	source_transcript=hg002_chrY_paternal_21.3;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.3;transcript_score=271.33457142857145;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000078;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000078;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000078:1;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1164029	1165011	.	-	.	source_transcript=hg002_chrY_paternal_21.3;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.3;transcript_score=271.33457142857145;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000078;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000078;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000078:2;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1165012	1167724	.	-	.	source_transcript=hg002_chrY_paternal_21.3;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.3;transcript_score=271.33457142857145;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000078;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000078;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000078:2;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1167725	1167940	.	-	.	source_transcript=hg002_chrY_paternal_21.3;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.3;transcript_score=271.33457142857145;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000078;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000078;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000078:3;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1167941	1178432	.	-	.	source_transcript=hg002_chrY_paternal_21.3;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.3;transcript_score=271.33457142857145;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000078;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000078;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000078:3;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1178433	1178594	.	-	.	source_transcript=hg002_chrY_paternal_21.3;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.3;transcript_score=271.33457142857145;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000078;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000078;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000078:4;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1178595	1178742	.	-	.	source_transcript=hg002_chrY_paternal_21.3;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.3;transcript_score=271.33457142857145;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000078;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000078;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000078:4;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1178743	1178841	.	-	.	source_transcript=hg002_chrY_paternal_21.3;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.3;transcript_score=271.33457142857145;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000078;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000078;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000078:5;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1178842	1181635	.	-	.	source_transcript=hg002_chrY_paternal_21.3;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.3;transcript_score=271.33457142857145;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000078;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000078;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000078:5;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1181636	1182204	.	-	.	source_transcript=hg002_chrY_paternal_21.3;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.3;transcript_score=271.33457142857145;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000078;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000078;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000078:6;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1182205	1184597	.	-	.	source_transcript=hg002_chrY_paternal_21.3;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.3;transcript_score=271.33457142857145;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000078;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000078;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000078:6;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1184598	1185539	.	-	.	source_transcript=hg002_chrY_paternal_21.3;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.3;transcript_score=271.33457142857145;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000078;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000078;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000078:7;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	1163552	1197935	1000	-	.	source_transcript=hg002_chrY_paternal_21.4;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.4;transcript_score=277.6637777777778;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000079;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_G0000015;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=HG03009_ch_T0000079;Name=LOC101928032
HG03009_chrY	CAT	exon	1163552	1163654	.	-	.	source_transcript=hg002_chrY_paternal_21.4;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.4;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000079;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000079;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000079:0;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1163655	1163776	.	-	.	source_transcript=hg002_chrY_paternal_21.4;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.4;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000079;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000079;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000079:0;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1163777	1163906	.	-	.	source_transcript=hg002_chrY_paternal_21.4;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.4;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000079;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000079;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000079:1;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1163907	1164028	.	-	.	source_transcript=hg002_chrY_paternal_21.4;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.4;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000079;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000079;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000079:1;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1164029	1165011	.	-	.	source_transcript=hg002_chrY_paternal_21.4;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.4;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000079;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000079;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000079:2;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1165012	1167724	.	-	.	source_transcript=hg002_chrY_paternal_21.4;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.4;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000079;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000079;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000079:2;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1167725	1167940	.	-	.	source_transcript=hg002_chrY_paternal_21.4;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.4;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000079;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000079;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000079:3;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1167941	1178432	.	-	.	source_transcript=hg002_chrY_paternal_21.4;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.4;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000079;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000079;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000079:3;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1178433	1178594	.	-	.	source_transcript=hg002_chrY_paternal_21.4;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.4;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000079;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000079;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000079:4;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1178595	1178742	.	-	.	source_transcript=hg002_chrY_paternal_21.4;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.4;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000079;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000079;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000079:4;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1178743	1178841	.	-	.	source_transcript=hg002_chrY_paternal_21.4;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.4;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000079;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000079;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000079:5;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1178842	1181635	.	-	.	source_transcript=hg002_chrY_paternal_21.4;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.4;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000079;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000079;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000079:5;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1181636	1182204	.	-	.	source_transcript=hg002_chrY_paternal_21.4;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.4;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000079;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000079;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000079:6;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1182205	1191263	.	-	.	source_transcript=hg002_chrY_paternal_21.4;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.4;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000079;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000079;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000079:6;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1191264	1191332	.	-	.	source_transcript=hg002_chrY_paternal_21.4;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.4;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000079;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000079;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000079:7;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1191333	1193912	.	-	.	source_transcript=hg002_chrY_paternal_21.4;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.4;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000079;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000079;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000079:7;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1193913	1194064	.	-	.	source_transcript=hg002_chrY_paternal_21.4;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.4;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000079;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000079;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000079:8;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1194065	1197780	.	-	.	source_transcript=hg002_chrY_paternal_21.4;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.4;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000079;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000079;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000079:8;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1197781	1197935	.	-	.	source_transcript=hg002_chrY_paternal_21.4;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.4;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000079;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000079;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000079:9;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	1163552	1197935	1000	-	.	source_transcript=hg002_chrY_paternal_21.5;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.5;transcript_score=277.6637777777778;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000080;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_G0000015;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=HG03009_ch_T0000080;Name=LOC101928032
HG03009_chrY	CAT	exon	1163552	1163654	.	-	.	source_transcript=hg002_chrY_paternal_21.5;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.5;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000080;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000080;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000080:0;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1163655	1163776	.	-	.	source_transcript=hg002_chrY_paternal_21.5;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.5;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000080;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000080;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000080:0;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1163777	1163906	.	-	.	source_transcript=hg002_chrY_paternal_21.5;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.5;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000080;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000080;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000080:1;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1163907	1164028	.	-	.	source_transcript=hg002_chrY_paternal_21.5;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.5;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000080;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000080;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000080:1;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1164029	1165011	.	-	.	source_transcript=hg002_chrY_paternal_21.5;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.5;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000080;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000080;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000080:2;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1165012	1167724	.	-	.	source_transcript=hg002_chrY_paternal_21.5;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.5;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000080;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000080;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000080:2;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1167725	1167940	.	-	.	source_transcript=hg002_chrY_paternal_21.5;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.5;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000080;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000080;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000080:3;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1167941	1178432	.	-	.	source_transcript=hg002_chrY_paternal_21.5;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.5;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000080;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000080;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000080:3;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1178433	1178594	.	-	.	source_transcript=hg002_chrY_paternal_21.5;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.5;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000080;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000080;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000080:4;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1178595	1178742	.	-	.	source_transcript=hg002_chrY_paternal_21.5;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.5;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000080;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000080;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000080:4;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1178743	1178841	.	-	.	source_transcript=hg002_chrY_paternal_21.5;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.5;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000080;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000080;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000080:5;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1178842	1181635	.	-	.	source_transcript=hg002_chrY_paternal_21.5;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.5;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000080;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000080;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000080:5;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1181636	1182204	.	-	.	source_transcript=hg002_chrY_paternal_21.5;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.5;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000080;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000080;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000080:6;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1182205	1191263	.	-	.	source_transcript=hg002_chrY_paternal_21.5;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.5;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000080;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000080;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000080:6;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1191264	1191332	.	-	.	source_transcript=hg002_chrY_paternal_21.5;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.5;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000080;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000080;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000080:7;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1191333	1193925	.	-	.	source_transcript=hg002_chrY_paternal_21.5;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.5;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000080;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000080;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000080:7;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1193926	1194064	.	-	.	source_transcript=hg002_chrY_paternal_21.5;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.5;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000080;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000080;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000080:8;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1194065	1197780	.	-	.	source_transcript=hg002_chrY_paternal_21.5;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.5;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000080;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000080;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000080:8;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1197781	1197935	.	-	.	source_transcript=hg002_chrY_paternal_21.5;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.5;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000080;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000080;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000080:9;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	1163552	1197935	1000	-	.	source_transcript=hg002_chrY_paternal_21.6;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.6;transcript_score=274.883;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000081;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_G0000015;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=HG03009_ch_T0000081;Name=LOC101928032
HG03009_chrY	CAT	exon	1163552	1163654	.	-	.	source_transcript=hg002_chrY_paternal_21.6;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.6;transcript_score=274.883;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000081;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000081;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000081:0;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1163655	1163776	.	-	.	source_transcript=hg002_chrY_paternal_21.6;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.6;transcript_score=274.883;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000081;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000081;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000081:0;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1163777	1163906	.	-	.	source_transcript=hg002_chrY_paternal_21.6;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.6;transcript_score=274.883;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000081;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000081;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000081:1;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1163907	1164028	.	-	.	source_transcript=hg002_chrY_paternal_21.6;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.6;transcript_score=274.883;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000081;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000081;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000081:1;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1164029	1165011	.	-	.	source_transcript=hg002_chrY_paternal_21.6;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.6;transcript_score=274.883;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000081;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000081;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000081:2;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1165012	1167724	.	-	.	source_transcript=hg002_chrY_paternal_21.6;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.6;transcript_score=274.883;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000081;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000081;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000081:2;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1167725	1167940	.	-	.	source_transcript=hg002_chrY_paternal_21.6;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.6;transcript_score=274.883;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000081;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000081;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000081:3;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1167941	1178432	.	-	.	source_transcript=hg002_chrY_paternal_21.6;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.6;transcript_score=274.883;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000081;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000081;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000081:3;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1178433	1178594	.	-	.	source_transcript=hg002_chrY_paternal_21.6;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.6;transcript_score=274.883;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000081;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000081;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000081:4;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1178595	1178742	.	-	.	source_transcript=hg002_chrY_paternal_21.6;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.6;transcript_score=274.883;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000081;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000081;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000081:4;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1178743	1178841	.	-	.	source_transcript=hg002_chrY_paternal_21.6;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.6;transcript_score=274.883;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000081;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000081;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000081:5;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1178842	1181635	.	-	.	source_transcript=hg002_chrY_paternal_21.6;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.6;transcript_score=274.883;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000081;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000081;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000081:5;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1181636	1182204	.	-	.	source_transcript=hg002_chrY_paternal_21.6;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.6;transcript_score=274.883;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000081;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000081;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000081:6;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1182205	1193925	.	-	.	source_transcript=hg002_chrY_paternal_21.6;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.6;transcript_score=274.883;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000081;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000081;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000081:6;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1193926	1194064	.	-	.	source_transcript=hg002_chrY_paternal_21.6;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.6;transcript_score=274.883;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000081;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000081;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000081:7;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1194065	1197780	.	-	.	source_transcript=hg002_chrY_paternal_21.6;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.6;transcript_score=274.883;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000081;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000081;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000081:7;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1197781	1197935	.	-	.	source_transcript=hg002_chrY_paternal_21.6;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.6;transcript_score=274.883;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000081;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000081;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000081:8;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	1163552	1197935	1000	-	.	source_transcript=hg002_chrY_paternal_21.7;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.7;transcript_score=274.883;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000082;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_G0000015;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=HG03009_ch_T0000082;Name=LOC101928032
HG03009_chrY	CAT	exon	1163552	1163654	.	-	.	source_transcript=hg002_chrY_paternal_21.7;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.7;transcript_score=274.883;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000082;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000082;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000082:0;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1163655	1163776	.	-	.	source_transcript=hg002_chrY_paternal_21.7;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.7;transcript_score=274.883;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000082;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000082;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000082:0;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1163777	1163906	.	-	.	source_transcript=hg002_chrY_paternal_21.7;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.7;transcript_score=274.883;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000082;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000082;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000082:1;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1163907	1164028	.	-	.	source_transcript=hg002_chrY_paternal_21.7;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.7;transcript_score=274.883;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000082;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000082;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000082:1;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1164029	1165011	.	-	.	source_transcript=hg002_chrY_paternal_21.7;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.7;transcript_score=274.883;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000082;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000082;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000082:2;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1165012	1167724	.	-	.	source_transcript=hg002_chrY_paternal_21.7;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.7;transcript_score=274.883;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000082;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000082;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000082:2;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1167725	1167940	.	-	.	source_transcript=hg002_chrY_paternal_21.7;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.7;transcript_score=274.883;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000082;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000082;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000082:3;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1167941	1178432	.	-	.	source_transcript=hg002_chrY_paternal_21.7;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.7;transcript_score=274.883;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000082;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000082;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000082:3;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1178433	1178594	.	-	.	source_transcript=hg002_chrY_paternal_21.7;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.7;transcript_score=274.883;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000082;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000082;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000082:4;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1178595	1178742	.	-	.	source_transcript=hg002_chrY_paternal_21.7;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.7;transcript_score=274.883;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000082;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000082;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000082:4;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1178743	1178841	.	-	.	source_transcript=hg002_chrY_paternal_21.7;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.7;transcript_score=274.883;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000082;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000082;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000082:5;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1178842	1181635	.	-	.	source_transcript=hg002_chrY_paternal_21.7;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.7;transcript_score=274.883;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000082;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000082;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000082:5;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1181636	1182204	.	-	.	source_transcript=hg002_chrY_paternal_21.7;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.7;transcript_score=274.883;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000082;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000082;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000082:6;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1182205	1193912	.	-	.	source_transcript=hg002_chrY_paternal_21.7;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.7;transcript_score=274.883;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000082;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000082;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000082:6;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1193913	1194064	.	-	.	source_transcript=hg002_chrY_paternal_21.7;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.7;transcript_score=274.883;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000082;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000082;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000082:7;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1194065	1197780	.	-	.	source_transcript=hg002_chrY_paternal_21.7;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.7;transcript_score=274.883;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000082;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000082;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000082:7;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1197781	1197935	.	-	.	source_transcript=hg002_chrY_paternal_21.7;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.7;transcript_score=274.883;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000082;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000082;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000082:8;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	1163552	1197935	1000	-	.	source_transcript=hg002_chrY_paternal_21.8;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.8;transcript_score=271.3045714285714;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000083;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_G0000015;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=HG03009_ch_T0000083;Name=LOC101928032
HG03009_chrY	CAT	exon	1163552	1163654	.	-	.	source_transcript=hg002_chrY_paternal_21.8;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.8;transcript_score=271.3045714285714;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000083;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000083;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000083:0;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1163655	1163776	.	-	.	source_transcript=hg002_chrY_paternal_21.8;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.8;transcript_score=271.3045714285714;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000083;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000083;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000083:0;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1163777	1163906	.	-	.	source_transcript=hg002_chrY_paternal_21.8;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.8;transcript_score=271.3045714285714;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000083;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000083;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000083:1;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1163907	1164028	.	-	.	source_transcript=hg002_chrY_paternal_21.8;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.8;transcript_score=271.3045714285714;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000083;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000083;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000083:1;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1164029	1165011	.	-	.	source_transcript=hg002_chrY_paternal_21.8;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.8;transcript_score=271.3045714285714;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000083;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000083;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000083:2;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1165012	1167724	.	-	.	source_transcript=hg002_chrY_paternal_21.8;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.8;transcript_score=271.3045714285714;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000083;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000083;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000083:2;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1167725	1167940	.	-	.	source_transcript=hg002_chrY_paternal_21.8;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.8;transcript_score=271.3045714285714;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000083;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000083;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000083:3;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1167941	1178432	.	-	.	source_transcript=hg002_chrY_paternal_21.8;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.8;transcript_score=271.3045714285714;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000083;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000083;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000083:3;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1178433	1178594	.	-	.	source_transcript=hg002_chrY_paternal_21.8;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.8;transcript_score=271.3045714285714;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000083;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000083;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000083:4;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1178595	1178742	.	-	.	source_transcript=hg002_chrY_paternal_21.8;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.8;transcript_score=271.3045714285714;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000083;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000083;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000083:4;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1178743	1178841	.	-	.	source_transcript=hg002_chrY_paternal_21.8;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.8;transcript_score=271.3045714285714;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000083;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000083;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000083:5;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1178842	1181635	.	-	.	source_transcript=hg002_chrY_paternal_21.8;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.8;transcript_score=271.3045714285714;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000083;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000083;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000083:5;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1181636	1182204	.	-	.	source_transcript=hg002_chrY_paternal_21.8;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.8;transcript_score=271.3045714285714;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000083;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000083;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000083:6;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1182205	1197780	.	-	.	source_transcript=hg002_chrY_paternal_21.8;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.8;transcript_score=271.3045714285714;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000083;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000083;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000083:6;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1197781	1197935	.	-	.	source_transcript=hg002_chrY_paternal_21.8;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.8;transcript_score=271.3045714285714;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000083;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000083;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000083:7;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	1163552	1197935	1000	-	.	source_transcript=hg002_chrY_paternal_21.9;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.9;transcript_score=279.855;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000084;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_G0000015;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=HG03009_ch_T0000084;Name=LOC101928032
HG03009_chrY	CAT	exon	1163552	1163654	.	-	.	source_transcript=hg002_chrY_paternal_21.9;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.9;transcript_score=279.855;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000084;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000084;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000084:0;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1163655	1163776	.	-	.	source_transcript=hg002_chrY_paternal_21.9;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.9;transcript_score=279.855;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000084;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000084;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000084:0;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1163777	1163906	.	-	.	source_transcript=hg002_chrY_paternal_21.9;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.9;transcript_score=279.855;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000084;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000084;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000084:1;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1163907	1164028	.	-	.	source_transcript=hg002_chrY_paternal_21.9;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.9;transcript_score=279.855;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000084;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000084;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000084:1;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1164029	1165011	.	-	.	source_transcript=hg002_chrY_paternal_21.9;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.9;transcript_score=279.855;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000084;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000084;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000084:2;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1165012	1167724	.	-	.	source_transcript=hg002_chrY_paternal_21.9;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.9;transcript_score=279.855;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000084;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000084;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000084:2;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1167725	1167940	.	-	.	source_transcript=hg002_chrY_paternal_21.9;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.9;transcript_score=279.855;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000084;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000084;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000084:3;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1167941	1178432	.	-	.	source_transcript=hg002_chrY_paternal_21.9;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.9;transcript_score=279.855;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000084;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000084;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000084:3;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1178433	1178594	.	-	.	source_transcript=hg002_chrY_paternal_21.9;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.9;transcript_score=279.855;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000084;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000084;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000084:4;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1178595	1178742	.	-	.	source_transcript=hg002_chrY_paternal_21.9;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.9;transcript_score=279.855;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000084;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000084;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000084:4;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1178743	1178841	.	-	.	source_transcript=hg002_chrY_paternal_21.9;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.9;transcript_score=279.855;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000084;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000084;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000084:5;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1178842	1181635	.	-	.	source_transcript=hg002_chrY_paternal_21.9;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.9;transcript_score=279.855;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000084;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000084;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000084:5;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1181636	1182204	.	-	.	source_transcript=hg002_chrY_paternal_21.9;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.9;transcript_score=279.855;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000084;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000084;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000084:6;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1182205	1187762	.	-	.	source_transcript=hg002_chrY_paternal_21.9;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.9;transcript_score=279.855;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000084;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000084;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000084:6;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1187763	1187907	.	-	.	source_transcript=hg002_chrY_paternal_21.9;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.9;transcript_score=279.855;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000084;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000084;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000084:7;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1187908	1191263	.	-	.	source_transcript=hg002_chrY_paternal_21.9;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.9;transcript_score=279.855;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000084;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000084;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000084:7;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1191264	1191332	.	-	.	source_transcript=hg002_chrY_paternal_21.9;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.9;transcript_score=279.855;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000084;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000084;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000084:8;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1191333	1193929	.	-	.	source_transcript=hg002_chrY_paternal_21.9;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.9;transcript_score=279.855;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000084;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000084;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000084:8;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1193930	1194064	.	-	.	source_transcript=hg002_chrY_paternal_21.9;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.9;transcript_score=279.855;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000084;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000084;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000084:9;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1194065	1197780	.	-	.	source_transcript=hg002_chrY_paternal_21.9;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.9;transcript_score=279.855;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000084;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000084;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000084:9;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1197781	1197935	.	-	.	source_transcript=hg002_chrY_paternal_21.9;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.9;transcript_score=279.855;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000084;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000084;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000084:10;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	1176889	1197935	1000	-	.	source_transcript=hg002_chrY_paternal_21.16;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.16;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.16;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.16;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000087;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_G0000015;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=HG03009_ch_T0000087;Name=LOC101928032
HG03009_chrY	CAT	exon	1176889	1176975	.	-	.	source_transcript=hg002_chrY_paternal_21.16;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.16;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.16;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.16;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000087;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000087;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000087:0;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1176976	1178432	.	-	.	source_transcript=hg002_chrY_paternal_21.16;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.16;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.16;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.16;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000087;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000087;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000087:0;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1178433	1178841	.	-	.	source_transcript=hg002_chrY_paternal_21.16;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.16;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.16;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.16;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000087;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000087;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000087:1;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1178842	1181635	.	-	.	source_transcript=hg002_chrY_paternal_21.16;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.16;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.16;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.16;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000087;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000087;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000087:1;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1181636	1182204	.	-	.	source_transcript=hg002_chrY_paternal_21.16;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.16;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.16;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.16;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000087;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000087;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000087:2;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1182205	1191263	.	-	.	source_transcript=hg002_chrY_paternal_21.16;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.16;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.16;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.16;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000087;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000087;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000087:2;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1191264	1191332	.	-	.	source_transcript=hg002_chrY_paternal_21.16;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.16;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.16;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.16;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000087;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000087;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000087:3;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1191333	1193929	.	-	.	source_transcript=hg002_chrY_paternal_21.16;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.16;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.16;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.16;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000087;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000087;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000087:3;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1193930	1194064	.	-	.	source_transcript=hg002_chrY_paternal_21.16;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.16;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.16;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.16;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000087;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000087;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000087:4;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1194065	1197780	.	-	.	source_transcript=hg002_chrY_paternal_21.16;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.16;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.16;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.16;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000087;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000087;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03009_ch_T0000087:4;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1197781	1197935	.	-	.	source_transcript=hg002_chrY_paternal_21.16;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.16;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.16;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.16;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG03009_ch_T0000087;gene_id=HG03009_ch_G0000015;Parent=HG03009_ch_T0000087;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03009_ch_T0000087:5;Name=LOC101928032;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	1205664	1211745	.	-	.	source_gene_common_name=SLC25A6;source_gene=hg002_chrY_paternal_22;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;gene_id=HG03009_ch_G0000016;gene_biotype=protein_coding;gene_name=SLC25A6;gene_sources=liftoff,augTM;ID=HG03009_ch_G0000016;Name=SLC25A6
HG03009_chrY	CAT	transcript	1205664	1211745	100	-	.	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000088;gene_id=HG03009_ch_G0000016;Parent=HG03009_ch_G0000016;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=HG03009_ch_T0000088;Name=SLC25A6
HG03009_chrY	CAT	exon	1205664	1206271	.	-	.	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000088;gene_id=HG03009_ch_G0000016;Parent=HG03009_ch_T0000088;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=exon:HG03009_ch_T0000088:0;Name=SLC25A6;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1206114	1206271	.	-	2	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000088;gene_id=HG03009_ch_G0000016;Parent=HG03009_ch_T0000088;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=CDS:HG03009_ch_T0000088:0;Name=SLC25A6;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	1206114	1206116	.	-	0	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000088;gene_id=HG03009_ch_G0000016;Parent=HG03009_ch_T0000088;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=stop_codon:HG03009_ch_T0000088;Name=SLC25A6;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1206272	1206790	.	-	.	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000088;gene_id=HG03009_ch_G0000016;Parent=HG03009_ch_T0000088;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=intron:HG03009_ch_T0000088:0;Name=SLC25A6;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1206791	1206931	.	-	.	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000088;gene_id=HG03009_ch_G0000016;Parent=HG03009_ch_T0000088;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=exon:HG03009_ch_T0000088:1;Name=SLC25A6;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1206791	1206931	.	-	2	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000088;gene_id=HG03009_ch_G0000016;Parent=HG03009_ch_T0000088;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=CDS:HG03009_ch_T0000088:1;Name=SLC25A6;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1206932	1208752	.	-	.	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000088;gene_id=HG03009_ch_G0000016;Parent=HG03009_ch_T0000088;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=intron:HG03009_ch_T0000088:1;Name=SLC25A6;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1208753	1209239	.	-	.	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000088;gene_id=HG03009_ch_G0000016;Parent=HG03009_ch_T0000088;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=exon:HG03009_ch_T0000088:2;Name=SLC25A6;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1208753	1209239	.	-	0	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000088;gene_id=HG03009_ch_G0000016;Parent=HG03009_ch_T0000088;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=CDS:HG03009_ch_T0000088:2;Name=SLC25A6;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1209240	1211530	.	-	.	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000088;gene_id=HG03009_ch_G0000016;Parent=HG03009_ch_T0000088;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=intron:HG03009_ch_T0000088:2;Name=SLC25A6;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1211531	1211745	.	-	.	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000088;gene_id=HG03009_ch_G0000016;Parent=HG03009_ch_T0000088;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=exon:HG03009_ch_T0000088:3;Name=SLC25A6;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1211531	1211641	.	-	0	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000088;gene_id=HG03009_ch_G0000016;Parent=HG03009_ch_T0000088;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=CDS:HG03009_ch_T0000088:3;Name=SLC25A6;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	1211639	1211641	.	-	0	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000088;gene_id=HG03009_ch_G0000016;Parent=HG03009_ch_T0000088;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=start_codon:HG03009_ch_T0000088;Name=SLC25A6;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	1211625	1216545	.	+	.	source_gene_common_name=LOC105373102;source_gene=hg002_chrY_paternal_23;alternative_source_transcripts=hg002_chrY_paternal_23.1,hg002_chrY_paternal_23.1;gene_id=HG03009_ch_G0000017;gene_biotype=protein_coding;gene_name=LOC105373102;gene_sources=liftoff,augTM;ID=HG03009_ch_G0000017;Name=LOC105373102
HG03009_chrY	CAT	transcript	1211625	1216545	100	+	.	source_transcript=hg002_chrY_paternal_23.1;source_transcript_name=hg002_chrY_paternal_23.2;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_23.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.1,hg002_chrY_paternal_23.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000089;gene_id=HG03009_ch_G0000017;Parent=HG03009_ch_G0000017;transcript_name=hg002_chrY_paternal_23.2;gene_name=LOC105373102;ID=HG03009_ch_T0000089;Name=LOC105373102
HG03009_chrY	CAT	exon	1211625	1211973	.	+	.	source_transcript=hg002_chrY_paternal_23.1;source_transcript_name=hg002_chrY_paternal_23.2;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_23.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.1,hg002_chrY_paternal_23.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000089;gene_id=HG03009_ch_G0000017;Parent=HG03009_ch_T0000089;transcript_name=hg002_chrY_paternal_23.2;gene_name=LOC105373102;ID=exon:HG03009_ch_T0000089:0;Name=LOC105373102;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1211625	1211973	.	+	0	source_transcript=hg002_chrY_paternal_23.1;source_transcript_name=hg002_chrY_paternal_23.2;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_23.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.1,hg002_chrY_paternal_23.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000089;gene_id=HG03009_ch_G0000017;Parent=HG03009_ch_T0000089;transcript_name=hg002_chrY_paternal_23.2;gene_name=LOC105373102;ID=CDS:HG03009_ch_T0000089:0;Name=LOC105373102;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	1211625	1211627	.	+	0	source_transcript=hg002_chrY_paternal_23.1;source_transcript_name=hg002_chrY_paternal_23.2;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_23.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.1,hg002_chrY_paternal_23.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000089;gene_id=HG03009_ch_G0000017;Parent=HG03009_ch_T0000089;transcript_name=hg002_chrY_paternal_23.2;gene_name=LOC105373102;ID=start_codon:HG03009_ch_T0000089;Name=LOC105373102;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1211974	1214793	.	+	.	source_transcript=hg002_chrY_paternal_23.1;source_transcript_name=hg002_chrY_paternal_23.2;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_23.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.1,hg002_chrY_paternal_23.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000089;gene_id=HG03009_ch_G0000017;Parent=HG03009_ch_T0000089;transcript_name=hg002_chrY_paternal_23.2;gene_name=LOC105373102;ID=intron:HG03009_ch_T0000089:0;Name=LOC105373102;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1214794	1215212	.	+	.	source_transcript=hg002_chrY_paternal_23.1;source_transcript_name=hg002_chrY_paternal_23.2;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_23.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.1,hg002_chrY_paternal_23.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000089;gene_id=HG03009_ch_G0000017;Parent=HG03009_ch_T0000089;transcript_name=hg002_chrY_paternal_23.2;gene_name=LOC105373102;ID=exon:HG03009_ch_T0000089:1;Name=LOC105373102;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1214794	1215212	.	+	2	source_transcript=hg002_chrY_paternal_23.1;source_transcript_name=hg002_chrY_paternal_23.2;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_23.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.1,hg002_chrY_paternal_23.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000089;gene_id=HG03009_ch_G0000017;Parent=HG03009_ch_T0000089;transcript_name=hg002_chrY_paternal_23.2;gene_name=LOC105373102;ID=CDS:HG03009_ch_T0000089:1;Name=LOC105373102;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1215213	1216035	.	+	.	source_transcript=hg002_chrY_paternal_23.1;source_transcript_name=hg002_chrY_paternal_23.2;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_23.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.1,hg002_chrY_paternal_23.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000089;gene_id=HG03009_ch_G0000017;Parent=HG03009_ch_T0000089;transcript_name=hg002_chrY_paternal_23.2;gene_name=LOC105373102;ID=intron:HG03009_ch_T0000089:1;Name=LOC105373102;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1216036	1216545	.	+	.	source_transcript=hg002_chrY_paternal_23.1;source_transcript_name=hg002_chrY_paternal_23.2;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_23.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.1,hg002_chrY_paternal_23.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000089;gene_id=HG03009_ch_G0000017;Parent=HG03009_ch_T0000089;transcript_name=hg002_chrY_paternal_23.2;gene_name=LOC105373102;ID=exon:HG03009_ch_T0000089:2;Name=LOC105373102;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1216036	1216056	.	+	0	source_transcript=hg002_chrY_paternal_23.1;source_transcript_name=hg002_chrY_paternal_23.2;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_23.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.1,hg002_chrY_paternal_23.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000089;gene_id=HG03009_ch_G0000017;Parent=HG03009_ch_T0000089;transcript_name=hg002_chrY_paternal_23.2;gene_name=LOC105373102;ID=CDS:HG03009_ch_T0000089:2;Name=LOC105373102;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	1216054	1216056	.	+	0	source_transcript=hg002_chrY_paternal_23.1;source_transcript_name=hg002_chrY_paternal_23.2;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_23.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.1,hg002_chrY_paternal_23.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000089;gene_id=HG03009_ch_G0000017;Parent=HG03009_ch_T0000089;transcript_name=hg002_chrY_paternal_23.2;gene_name=LOC105373102;ID=stop_codon:HG03009_ch_T0000089;Name=LOC105373102;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	1211625	1216545	1000	+	.	source_transcript=hg002_chrY_paternal_23.2;source_transcript_name=hg002_chrY_paternal_23.1;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_23.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.2,hg002_chrY_paternal_23.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000090;gene_id=HG03009_ch_G0000017;Parent=HG03009_ch_G0000017;transcript_name=hg002_chrY_paternal_23.1;gene_name=LOC105373102;ID=HG03009_ch_T0000090;Name=LOC105373102
HG03009_chrY	CAT	exon	1211625	1211973	.	+	.	source_transcript=hg002_chrY_paternal_23.2;source_transcript_name=hg002_chrY_paternal_23.1;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_23.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.2,hg002_chrY_paternal_23.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000090;gene_id=HG03009_ch_G0000017;Parent=HG03009_ch_T0000090;transcript_name=hg002_chrY_paternal_23.1;gene_name=LOC105373102;ID=exon:HG03009_ch_T0000090:0;Name=LOC105373102;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1211974	1214793	.	+	.	source_transcript=hg002_chrY_paternal_23.2;source_transcript_name=hg002_chrY_paternal_23.1;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_23.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.2,hg002_chrY_paternal_23.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000090;gene_id=HG03009_ch_G0000017;Parent=HG03009_ch_T0000090;transcript_name=hg002_chrY_paternal_23.1;gene_name=LOC105373102;ID=intron:HG03009_ch_T0000090:0;Name=LOC105373102;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1214794	1215212	.	+	.	source_transcript=hg002_chrY_paternal_23.2;source_transcript_name=hg002_chrY_paternal_23.1;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_23.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.2,hg002_chrY_paternal_23.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000090;gene_id=HG03009_ch_G0000017;Parent=HG03009_ch_T0000090;transcript_name=hg002_chrY_paternal_23.1;gene_name=LOC105373102;ID=exon:HG03009_ch_T0000090:1;Name=LOC105373102;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1215213	1216035	.	+	.	source_transcript=hg002_chrY_paternal_23.2;source_transcript_name=hg002_chrY_paternal_23.1;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_23.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.2,hg002_chrY_paternal_23.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000090;gene_id=HG03009_ch_G0000017;Parent=HG03009_ch_T0000090;transcript_name=hg002_chrY_paternal_23.1;gene_name=LOC105373102;ID=intron:HG03009_ch_T0000090:1;Name=LOC105373102;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1216036	1216179	.	+	.	source_transcript=hg002_chrY_paternal_23.2;source_transcript_name=hg002_chrY_paternal_23.1;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_23.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.2,hg002_chrY_paternal_23.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000090;gene_id=HG03009_ch_G0000017;Parent=HG03009_ch_T0000090;transcript_name=hg002_chrY_paternal_23.1;gene_name=LOC105373102;ID=exon:HG03009_ch_T0000090:2;Name=LOC105373102;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1216180	1216273	.	+	.	source_transcript=hg002_chrY_paternal_23.2;source_transcript_name=hg002_chrY_paternal_23.1;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_23.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.2,hg002_chrY_paternal_23.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000090;gene_id=HG03009_ch_G0000017;Parent=HG03009_ch_T0000090;transcript_name=hg002_chrY_paternal_23.1;gene_name=LOC105373102;ID=intron:HG03009_ch_T0000090:2;Name=LOC105373102;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1216274	1216545	.	+	.	source_transcript=hg002_chrY_paternal_23.2;source_transcript_name=hg002_chrY_paternal_23.1;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_23.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.2,hg002_chrY_paternal_23.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000090;gene_id=HG03009_ch_G0000017;Parent=HG03009_ch_T0000090;transcript_name=hg002_chrY_paternal_23.1;gene_name=LOC105373102;ID=exon:HG03009_ch_T0000090:3;Name=LOC105373102;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	1216689	1219075	.	+	.	source_gene_common_name=LINC00106;source_gene=hg002_chrY_paternal_24;alternative_source_transcripts=hg002_chrY_paternal_24.1,hg002_chrY_paternal_24.1;gene_id=HG03009_ch_G0000018;gene_biotype=lncRNA;gene_name=LINC00106;gene_sources=liftoff;ID=HG03009_ch_G0000018;Name=LINC00106
HG03009_chrY	CAT	transcript	1216689	1219075	1000	+	.	source_transcript=hg002_chrY_paternal_24.1;source_transcript_name=hg002_chrY_paternal_24.1;source_gene=hg002_chrY_paternal_24;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_24;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_24.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_24.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=hg002_chrY_paternal_24.1,hg002_chrY_paternal_24.1;transcript_id=HG03009_ch_T0000091;gene_id=HG03009_ch_G0000018;Parent=HG03009_ch_G0000018;transcript_name=hg002_chrY_paternal_24.1;gene_name=LINC00106;ID=HG03009_ch_T0000091;Name=LINC00106
HG03009_chrY	CAT	exon	1216689	1216888	.	+	.	source_transcript=hg002_chrY_paternal_24.1;source_transcript_name=hg002_chrY_paternal_24.1;source_gene=hg002_chrY_paternal_24;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_24;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_24.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_24.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=hg002_chrY_paternal_24.1,hg002_chrY_paternal_24.1;transcript_id=HG03009_ch_T0000091;gene_id=HG03009_ch_G0000018;Parent=HG03009_ch_T0000091;transcript_name=hg002_chrY_paternal_24.1;gene_name=LINC00106;ID=exon:HG03009_ch_T0000091:0;Name=LINC00106;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1216889	1218487	.	+	.	source_transcript=hg002_chrY_paternal_24.1;source_transcript_name=hg002_chrY_paternal_24.1;source_gene=hg002_chrY_paternal_24;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_24;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_24.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_24.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=hg002_chrY_paternal_24.1,hg002_chrY_paternal_24.1;transcript_id=HG03009_ch_T0000091;gene_id=HG03009_ch_G0000018;Parent=HG03009_ch_T0000091;transcript_name=hg002_chrY_paternal_24.1;gene_name=LINC00106;ID=intron:HG03009_ch_T0000091:0;Name=LINC00106;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1218488	1218621	.	+	.	source_transcript=hg002_chrY_paternal_24.1;source_transcript_name=hg002_chrY_paternal_24.1;source_gene=hg002_chrY_paternal_24;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_24;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_24.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_24.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=hg002_chrY_paternal_24.1,hg002_chrY_paternal_24.1;transcript_id=HG03009_ch_T0000091;gene_id=HG03009_ch_G0000018;Parent=HG03009_ch_T0000091;transcript_name=hg002_chrY_paternal_24.1;gene_name=LINC00106;ID=exon:HG03009_ch_T0000091:1;Name=LINC00106;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1218622	1219029	.	+	.	source_transcript=hg002_chrY_paternal_24.1;source_transcript_name=hg002_chrY_paternal_24.1;source_gene=hg002_chrY_paternal_24;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_24;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_24.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_24.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=hg002_chrY_paternal_24.1,hg002_chrY_paternal_24.1;transcript_id=HG03009_ch_T0000091;gene_id=HG03009_ch_G0000018;Parent=HG03009_ch_T0000091;transcript_name=hg002_chrY_paternal_24.1;gene_name=LINC00106;ID=intron:HG03009_ch_T0000091:1;Name=LINC00106;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1219030	1219075	.	+	.	source_transcript=hg002_chrY_paternal_24.1;source_transcript_name=hg002_chrY_paternal_24.1;source_gene=hg002_chrY_paternal_24;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_24;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_24.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_24.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=hg002_chrY_paternal_24.1,hg002_chrY_paternal_24.1;transcript_id=HG03009_ch_T0000091;gene_id=HG03009_ch_G0000018;Parent=HG03009_ch_T0000091;transcript_name=hg002_chrY_paternal_24.1;gene_name=LINC00106;ID=exon:HG03009_ch_T0000091:2;Name=LINC00106;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	1220192	1233179	.	+	.	source_gene_common_name=ASMTL-AS1;source_gene=hg002_chrY_paternal_25;alternative_source_transcripts=hg002_chrY_paternal_25.1,hg002_chrY_paternal_25.1;gene_id=HG03009_ch_G0000019;gene_biotype=lncRNA;gene_name=ASMTL-AS1;gene_sources=liftoff;ID=HG03009_ch_G0000019;Name=ASMTL-AS1
HG03009_chrY	CAT	transcript	1220192	1231322	1000	+	.	source_transcript=hg002_chrY_paternal_25.1;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.1,hg002_chrY_paternal_25.1;transcript_id=HG03009_ch_T0000092;gene_id=HG03009_ch_G0000019;Parent=HG03009_ch_G0000019;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=HG03009_ch_T0000092;Name=ASMTL-AS1
HG03009_chrY	CAT	exon	1220192	1220247	.	+	.	source_transcript=hg002_chrY_paternal_25.1;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.1,hg002_chrY_paternal_25.1;transcript_id=HG03009_ch_T0000092;gene_id=HG03009_ch_G0000019;Parent=HG03009_ch_T0000092;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=exon:HG03009_ch_T0000092:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1220248	1221122	.	+	.	source_transcript=hg002_chrY_paternal_25.1;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.1,hg002_chrY_paternal_25.1;transcript_id=HG03009_ch_T0000092;gene_id=HG03009_ch_G0000019;Parent=HG03009_ch_T0000092;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=intron:HG03009_ch_T0000092:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1221123	1221886	.	+	.	source_transcript=hg002_chrY_paternal_25.1;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.1,hg002_chrY_paternal_25.1;transcript_id=HG03009_ch_T0000092;gene_id=HG03009_ch_G0000019;Parent=HG03009_ch_T0000092;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=exon:HG03009_ch_T0000092:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1221887	1222986	.	+	.	source_transcript=hg002_chrY_paternal_25.1;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.1,hg002_chrY_paternal_25.1;transcript_id=HG03009_ch_T0000092;gene_id=HG03009_ch_G0000019;Parent=HG03009_ch_T0000092;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=intron:HG03009_ch_T0000092:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1222987	1223111	.	+	.	source_transcript=hg002_chrY_paternal_25.1;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.1,hg002_chrY_paternal_25.1;transcript_id=HG03009_ch_T0000092;gene_id=HG03009_ch_G0000019;Parent=HG03009_ch_T0000092;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=exon:HG03009_ch_T0000092:2;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1223112	1230477	.	+	.	source_transcript=hg002_chrY_paternal_25.1;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.1,hg002_chrY_paternal_25.1;transcript_id=HG03009_ch_T0000092;gene_id=HG03009_ch_G0000019;Parent=HG03009_ch_T0000092;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=intron:HG03009_ch_T0000092:2;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1230478	1231322	.	+	.	source_transcript=hg002_chrY_paternal_25.1;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.1,hg002_chrY_paternal_25.1;transcript_id=HG03009_ch_T0000092;gene_id=HG03009_ch_G0000019;Parent=HG03009_ch_T0000092;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=exon:HG03009_ch_T0000092:3;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	1220192	1233179	1000	+	.	source_transcript=hg002_chrY_paternal_25.2;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.2,hg002_chrY_paternal_25.2;transcript_id=HG03009_ch_T0000093;gene_id=HG03009_ch_G0000019;Parent=HG03009_ch_G0000019;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=HG03009_ch_T0000093;Name=ASMTL-AS1
HG03009_chrY	CAT	exon	1220192	1220247	.	+	.	source_transcript=hg002_chrY_paternal_25.2;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.2,hg002_chrY_paternal_25.2;transcript_id=HG03009_ch_T0000093;gene_id=HG03009_ch_G0000019;Parent=HG03009_ch_T0000093;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=exon:HG03009_ch_T0000093:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1220248	1221122	.	+	.	source_transcript=hg002_chrY_paternal_25.2;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.2,hg002_chrY_paternal_25.2;transcript_id=HG03009_ch_T0000093;gene_id=HG03009_ch_G0000019;Parent=HG03009_ch_T0000093;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=intron:HG03009_ch_T0000093:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1221123	1221886	.	+	.	source_transcript=hg002_chrY_paternal_25.2;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.2,hg002_chrY_paternal_25.2;transcript_id=HG03009_ch_T0000093;gene_id=HG03009_ch_G0000019;Parent=HG03009_ch_T0000093;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=exon:HG03009_ch_T0000093:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1221887	1222986	.	+	.	source_transcript=hg002_chrY_paternal_25.2;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.2,hg002_chrY_paternal_25.2;transcript_id=HG03009_ch_T0000093;gene_id=HG03009_ch_G0000019;Parent=HG03009_ch_T0000093;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=intron:HG03009_ch_T0000093:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1222987	1223111	.	+	.	source_transcript=hg002_chrY_paternal_25.2;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.2,hg002_chrY_paternal_25.2;transcript_id=HG03009_ch_T0000093;gene_id=HG03009_ch_G0000019;Parent=HG03009_ch_T0000093;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=exon:HG03009_ch_T0000093:2;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1223112	1230477	.	+	.	source_transcript=hg002_chrY_paternal_25.2;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.2,hg002_chrY_paternal_25.2;transcript_id=HG03009_ch_T0000093;gene_id=HG03009_ch_G0000019;Parent=HG03009_ch_T0000093;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=intron:HG03009_ch_T0000093:2;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1230478	1230623	.	+	.	source_transcript=hg002_chrY_paternal_25.2;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.2,hg002_chrY_paternal_25.2;transcript_id=HG03009_ch_T0000093;gene_id=HG03009_ch_G0000019;Parent=HG03009_ch_T0000093;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=exon:HG03009_ch_T0000093:3;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1230624	1231497	.	+	.	source_transcript=hg002_chrY_paternal_25.2;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.2,hg002_chrY_paternal_25.2;transcript_id=HG03009_ch_T0000093;gene_id=HG03009_ch_G0000019;Parent=HG03009_ch_T0000093;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=intron:HG03009_ch_T0000093:3;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1231498	1232046	.	+	.	source_transcript=hg002_chrY_paternal_25.2;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.2,hg002_chrY_paternal_25.2;transcript_id=HG03009_ch_T0000093;gene_id=HG03009_ch_G0000019;Parent=HG03009_ch_T0000093;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=exon:HG03009_ch_T0000093:4;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1232047	1232478	.	+	.	source_transcript=hg002_chrY_paternal_25.2;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.2,hg002_chrY_paternal_25.2;transcript_id=HG03009_ch_T0000093;gene_id=HG03009_ch_G0000019;Parent=HG03009_ch_T0000093;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=intron:HG03009_ch_T0000093:4;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1232479	1233179	.	+	.	source_transcript=hg002_chrY_paternal_25.2;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.2,hg002_chrY_paternal_25.2;transcript_id=HG03009_ch_T0000093;gene_id=HG03009_ch_G0000019;Parent=HG03009_ch_T0000093;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=exon:HG03009_ch_T0000093:5;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	1222665	1271561	.	-	.	source_gene_common_name=ASMTL;source_gene=hg002_chrY_paternal_26;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;gene_id=HG03009_ch_G0000020;gene_biotype=protein_coding;gene_name=ASMTL;gene_sources=liftoff,augTM;ID=HG03009_ch_G0000020;Name=ASMTL
HG03009_chrY	CAT	transcript	1222665	1254189	100	-	.	source_transcript=hg002_chrY_paternal_26.1;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000094;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_G0000020;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=HG03009_ch_T0000094;Name=ASMTL
HG03009_chrY	CAT	exon	1222665	1223015	.	-	.	source_transcript=hg002_chrY_paternal_26.1;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000094;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03009_ch_T0000094:0;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1222795	1223015	.	-	2	source_transcript=hg002_chrY_paternal_26.1;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000094;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03009_ch_T0000094:0;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	1222795	1222797	.	-	0	source_transcript=hg002_chrY_paternal_26.1;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000094;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=stop_codon:HG03009_ch_T0000094;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1223016	1230466	.	-	.	source_transcript=hg002_chrY_paternal_26.1;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000094;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03009_ch_T0000094:0;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1230467	1230589	.	-	.	source_transcript=hg002_chrY_paternal_26.1;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000094;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03009_ch_T0000094:1;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1230467	1230589	.	-	2	source_transcript=hg002_chrY_paternal_26.1;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000094;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03009_ch_T0000094:1;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1230590	1235697	.	-	.	source_transcript=hg002_chrY_paternal_26.1;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000094;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03009_ch_T0000094:1;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1235698	1235841	.	-	.	source_transcript=hg002_chrY_paternal_26.1;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000094;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03009_ch_T0000094:2;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1235698	1235841	.	-	2	source_transcript=hg002_chrY_paternal_26.1;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000094;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03009_ch_T0000094:2;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1235842	1236706	.	-	.	source_transcript=hg002_chrY_paternal_26.1;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000094;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03009_ch_T0000094:2;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1236707	1236839	.	-	.	source_transcript=hg002_chrY_paternal_26.1;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000094;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03009_ch_T0000094:3;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1236707	1236839	.	-	0	source_transcript=hg002_chrY_paternal_26.1;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000094;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03009_ch_T0000094:3;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1236840	1239384	.	-	.	source_transcript=hg002_chrY_paternal_26.1;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000094;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03009_ch_T0000094:3;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1239385	1239569	.	-	.	source_transcript=hg002_chrY_paternal_26.1;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000094;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03009_ch_T0000094:4;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1239385	1239569	.	-	2	source_transcript=hg002_chrY_paternal_26.1;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000094;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03009_ch_T0000094:4;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1239570	1243204	.	-	.	source_transcript=hg002_chrY_paternal_26.1;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000094;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03009_ch_T0000094:4;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1243205	1243367	.	-	.	source_transcript=hg002_chrY_paternal_26.1;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000094;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03009_ch_T0000094:5;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1243205	1243367	.	-	0	source_transcript=hg002_chrY_paternal_26.1;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000094;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03009_ch_T0000094:5;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1243368	1245417	.	-	.	source_transcript=hg002_chrY_paternal_26.1;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000094;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03009_ch_T0000094:5;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1245418	1245805	.	-	.	source_transcript=hg002_chrY_paternal_26.1;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000094;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03009_ch_T0000094:6;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1245418	1245805	.	-	1	source_transcript=hg002_chrY_paternal_26.1;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000094;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03009_ch_T0000094:6;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1245806	1249975	.	-	.	source_transcript=hg002_chrY_paternal_26.1;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000094;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03009_ch_T0000094:6;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1249976	1250084	.	-	.	source_transcript=hg002_chrY_paternal_26.1;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000094;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03009_ch_T0000094:7;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1249976	1250084	.	-	2	source_transcript=hg002_chrY_paternal_26.1;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000094;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03009_ch_T0000094:7;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1250085	1252998	.	-	.	source_transcript=hg002_chrY_paternal_26.1;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000094;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03009_ch_T0000094:7;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1252999	1253060	.	-	.	source_transcript=hg002_chrY_paternal_26.1;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000094;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03009_ch_T0000094:8;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1252999	1253060	.	-	1	source_transcript=hg002_chrY_paternal_26.1;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000094;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03009_ch_T0000094:8;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1253061	1253669	.	-	.	source_transcript=hg002_chrY_paternal_26.1;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000094;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03009_ch_T0000094:8;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1253670	1253734	.	-	.	source_transcript=hg002_chrY_paternal_26.1;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000094;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03009_ch_T0000094:9;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1253670	1253734	.	-	0	source_transcript=hg002_chrY_paternal_26.1;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000094;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03009_ch_T0000094:9;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1253735	1254031	.	-	.	source_transcript=hg002_chrY_paternal_26.1;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000094;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03009_ch_T0000094:9;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1254032	1254189	.	-	.	source_transcript=hg002_chrY_paternal_26.1;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000094;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03009_ch_T0000094:10;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1254032	1254055	.	-	0	source_transcript=hg002_chrY_paternal_26.1;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000094;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03009_ch_T0000094:10;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	1254053	1254055	.	-	0	source_transcript=hg002_chrY_paternal_26.1;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000094;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=start_codon:HG03009_ch_T0000094;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	1222665	1257531	100	-	.	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000095;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_G0000020;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=HG03009_ch_T0000095;Name=ASMTL
HG03009_chrY	CAT	exon	1222665	1223015	.	-	.	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000095;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000095;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03009_ch_T0000095:0;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1222795	1223015	.	-	2	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000095;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000095;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03009_ch_T0000095:0;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	1222795	1222797	.	-	0	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000095;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000095;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=stop_codon:HG03009_ch_T0000095;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1223016	1230466	.	-	.	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000095;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000095;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03009_ch_T0000095:0;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1230467	1230589	.	-	.	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000095;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000095;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03009_ch_T0000095:1;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1230467	1230589	.	-	2	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000095;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000095;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03009_ch_T0000095:1;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1230590	1235697	.	-	.	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000095;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000095;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03009_ch_T0000095:1;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1235698	1235841	.	-	.	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000095;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000095;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03009_ch_T0000095:2;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1235698	1235841	.	-	2	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000095;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000095;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03009_ch_T0000095:2;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1235842	1236706	.	-	.	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000095;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000095;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03009_ch_T0000095:2;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1236707	1236839	.	-	.	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000095;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000095;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03009_ch_T0000095:3;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1236707	1236839	.	-	0	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000095;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000095;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03009_ch_T0000095:3;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1236840	1239384	.	-	.	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000095;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000095;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03009_ch_T0000095:3;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1239385	1239569	.	-	.	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000095;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000095;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03009_ch_T0000095:4;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1239385	1239569	.	-	2	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000095;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000095;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03009_ch_T0000095:4;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1239570	1243204	.	-	.	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000095;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000095;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03009_ch_T0000095:4;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1243205	1243367	.	-	.	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000095;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000095;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03009_ch_T0000095:5;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1243205	1243367	.	-	0	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000095;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000095;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03009_ch_T0000095:5;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1243368	1245417	.	-	.	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000095;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000095;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03009_ch_T0000095:5;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1245418	1245805	.	-	.	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000095;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000095;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03009_ch_T0000095:6;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1245418	1245805	.	-	1	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000095;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000095;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03009_ch_T0000095:6;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1245806	1249975	.	-	.	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000095;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000095;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03009_ch_T0000095:6;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1249976	1250084	.	-	.	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000095;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000095;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03009_ch_T0000095:7;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1249976	1250084	.	-	2	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000095;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000095;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03009_ch_T0000095:7;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1250085	1252998	.	-	.	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000095;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000095;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03009_ch_T0000095:7;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1252999	1253060	.	-	.	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000095;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000095;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03009_ch_T0000095:8;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1252999	1253060	.	-	1	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000095;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000095;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03009_ch_T0000095:8;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1253061	1253669	.	-	.	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000095;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000095;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03009_ch_T0000095:8;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1253670	1253734	.	-	.	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000095;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000095;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03009_ch_T0000095:9;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1253670	1253680	.	-	0	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000095;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000095;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03009_ch_T0000095:9;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	1253678	1253680	.	-	0	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000095;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000095;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=start_codon:HG03009_ch_T0000095;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1253735	1257071	.	-	.	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000095;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000095;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03009_ch_T0000095:9;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1257072	1257119	.	-	.	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000095;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000095;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03009_ch_T0000095:10;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1257120	1257369	.	-	.	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000095;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000095;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03009_ch_T0000095:10;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1257370	1257531	.	-	.	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000095;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000095;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03009_ch_T0000095:11;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	1222665	1270714	100	-	.	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000096;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_G0000020;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=HG03009_ch_T0000096;Name=ASMTL
HG03009_chrY	CAT	exon	1222665	1223015	.	-	.	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000096;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03009_ch_T0000096:0;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1222795	1223015	.	-	2	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000096;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03009_ch_T0000096:0;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	1222795	1222797	.	-	0	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000096;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=stop_codon:HG03009_ch_T0000096;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1223016	1230466	.	-	.	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000096;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03009_ch_T0000096:0;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1230467	1230589	.	-	.	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000096;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03009_ch_T0000096:1;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1230467	1230589	.	-	2	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000096;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03009_ch_T0000096:1;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1230590	1235697	.	-	.	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000096;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03009_ch_T0000096:1;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1235698	1235841	.	-	.	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000096;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03009_ch_T0000096:2;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1235698	1235841	.	-	2	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000096;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03009_ch_T0000096:2;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1235842	1236706	.	-	.	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000096;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03009_ch_T0000096:2;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1236707	1236839	.	-	.	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000096;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03009_ch_T0000096:3;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1236707	1236839	.	-	0	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000096;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03009_ch_T0000096:3;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1236840	1239384	.	-	.	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000096;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03009_ch_T0000096:3;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1239385	1239569	.	-	.	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000096;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03009_ch_T0000096:4;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1239385	1239569	.	-	2	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000096;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03009_ch_T0000096:4;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1239570	1243204	.	-	.	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000096;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03009_ch_T0000096:4;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1243205	1243367	.	-	.	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000096;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03009_ch_T0000096:5;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1243205	1243367	.	-	0	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000096;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03009_ch_T0000096:5;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1243368	1245417	.	-	.	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000096;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03009_ch_T0000096:5;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1245418	1245805	.	-	.	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000096;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03009_ch_T0000096:6;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1245418	1245805	.	-	1	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000096;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03009_ch_T0000096:6;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1245806	1249975	.	-	.	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000096;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03009_ch_T0000096:6;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1249976	1250084	.	-	.	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000096;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03009_ch_T0000096:7;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1249976	1250084	.	-	2	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000096;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03009_ch_T0000096:7;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1250085	1252998	.	-	.	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000096;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03009_ch_T0000096:7;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1252999	1253060	.	-	.	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000096;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03009_ch_T0000096:8;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1252999	1253060	.	-	1	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000096;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03009_ch_T0000096:8;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1253061	1253669	.	-	.	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000096;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03009_ch_T0000096:8;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1253670	1253734	.	-	.	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000096;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03009_ch_T0000096:9;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1253670	1253734	.	-	0	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000096;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03009_ch_T0000096:9;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1253735	1260160	.	-	.	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000096;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03009_ch_T0000096:9;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1260161	1260292	.	-	.	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000096;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03009_ch_T0000096:10;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1260161	1260292	.	-	0	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000096;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03009_ch_T0000096:10;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1260293	1270552	.	-	.	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000096;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03009_ch_T0000096:10;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1270553	1270714	.	-	.	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000096;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03009_ch_T0000096:11;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1270553	1270645	.	-	0	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000096;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03009_ch_T0000096:11;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	1270643	1270645	.	-	0	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000096;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=start_codon:HG03009_ch_T0000096;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	1222665	1270714	100	-	.	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000097;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_G0000020;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=HG03009_ch_T0000097;Name=ASMTL
HG03009_chrY	CAT	exon	1222665	1223015	.	-	.	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000097;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000097;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03009_ch_T0000097:0;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1222795	1223015	.	-	2	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000097;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000097;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03009_ch_T0000097:0;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	1222795	1222797	.	-	0	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000097;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000097;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=stop_codon:HG03009_ch_T0000097;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1223016	1230466	.	-	.	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000097;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000097;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03009_ch_T0000097:0;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1230467	1230589	.	-	.	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000097;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000097;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03009_ch_T0000097:1;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1230467	1230589	.	-	2	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000097;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000097;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03009_ch_T0000097:1;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1230590	1235697	.	-	.	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000097;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000097;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03009_ch_T0000097:1;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1235698	1235841	.	-	.	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000097;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000097;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03009_ch_T0000097:2;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1235698	1235841	.	-	2	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000097;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000097;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03009_ch_T0000097:2;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1235842	1236706	.	-	.	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000097;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000097;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03009_ch_T0000097:2;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1236707	1236839	.	-	.	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000097;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000097;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03009_ch_T0000097:3;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1236707	1236839	.	-	0	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000097;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000097;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03009_ch_T0000097:3;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1236840	1239384	.	-	.	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000097;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000097;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03009_ch_T0000097:3;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1239385	1239569	.	-	.	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000097;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000097;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03009_ch_T0000097:4;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1239385	1239569	.	-	2	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000097;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000097;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03009_ch_T0000097:4;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1239570	1243204	.	-	.	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000097;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000097;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03009_ch_T0000097:4;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1243205	1243367	.	-	.	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000097;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000097;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03009_ch_T0000097:5;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1243205	1243367	.	-	0	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000097;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000097;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03009_ch_T0000097:5;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1243368	1245417	.	-	.	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000097;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000097;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03009_ch_T0000097:5;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1245418	1245805	.	-	.	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000097;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000097;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03009_ch_T0000097:6;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1245418	1245805	.	-	1	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000097;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000097;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03009_ch_T0000097:6;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1245806	1249975	.	-	.	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000097;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000097;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03009_ch_T0000097:6;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1249976	1250084	.	-	.	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000097;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000097;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03009_ch_T0000097:7;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1249976	1250084	.	-	2	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000097;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000097;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03009_ch_T0000097:7;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1250085	1252998	.	-	.	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000097;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000097;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03009_ch_T0000097:7;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1252999	1253060	.	-	.	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000097;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000097;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03009_ch_T0000097:8;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1252999	1253060	.	-	1	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000097;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000097;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03009_ch_T0000097:8;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1253061	1253669	.	-	.	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000097;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000097;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03009_ch_T0000097:8;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1253670	1253734	.	-	.	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000097;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000097;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03009_ch_T0000097:9;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1253670	1253734	.	-	0	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000097;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000097;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03009_ch_T0000097:9;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1253735	1257071	.	-	.	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000097;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000097;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03009_ch_T0000097:9;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1257072	1257119	.	-	.	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000097;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000097;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03009_ch_T0000097:10;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1257072	1257119	.	-	0	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000097;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000097;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03009_ch_T0000097:10;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1257120	1260160	.	-	.	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000097;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000097;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03009_ch_T0000097:10;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1260161	1260292	.	-	.	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000097;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000097;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03009_ch_T0000097:11;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1260161	1260292	.	-	0	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000097;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000097;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03009_ch_T0000097:11;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1260293	1270552	.	-	.	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000097;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000097;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03009_ch_T0000097:11;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1270553	1270714	.	-	.	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000097;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000097;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03009_ch_T0000097:12;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1270553	1270645	.	-	0	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000097;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000097;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03009_ch_T0000097:12;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	1270643	1270645	.	-	0	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000097;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000097;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=start_codon:HG03009_ch_T0000097;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	1222665	1270714	100	-	.	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000098;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_G0000020;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=HG03009_ch_T0000098;Name=ASMTL
HG03009_chrY	CAT	exon	1222665	1223015	.	-	.	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000098;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03009_ch_T0000098:0;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1222795	1223015	.	-	2	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000098;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03009_ch_T0000098:0;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	1222795	1222797	.	-	0	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000098;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=stop_codon:HG03009_ch_T0000098;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1223016	1230466	.	-	.	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000098;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03009_ch_T0000098:0;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1230467	1230589	.	-	.	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000098;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03009_ch_T0000098:1;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1230467	1230589	.	-	2	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000098;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03009_ch_T0000098:1;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1230590	1235697	.	-	.	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000098;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03009_ch_T0000098:1;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1235698	1235841	.	-	.	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000098;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03009_ch_T0000098:2;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1235698	1235841	.	-	2	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000098;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03009_ch_T0000098:2;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1235842	1236706	.	-	.	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000098;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03009_ch_T0000098:2;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1236707	1236839	.	-	.	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000098;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03009_ch_T0000098:3;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1236707	1236839	.	-	0	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000098;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03009_ch_T0000098:3;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1236840	1239384	.	-	.	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000098;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03009_ch_T0000098:3;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1239385	1239569	.	-	.	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000098;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03009_ch_T0000098:4;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1239385	1239569	.	-	2	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000098;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03009_ch_T0000098:4;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1239570	1243204	.	-	.	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000098;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03009_ch_T0000098:4;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1243205	1243367	.	-	.	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000098;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03009_ch_T0000098:5;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1243205	1243367	.	-	0	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000098;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03009_ch_T0000098:5;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1243368	1245417	.	-	.	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000098;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03009_ch_T0000098:5;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1245418	1245805	.	-	.	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000098;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03009_ch_T0000098:6;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1245418	1245805	.	-	1	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000098;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03009_ch_T0000098:6;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1245806	1249975	.	-	.	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000098;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03009_ch_T0000098:6;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1249976	1250084	.	-	.	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000098;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03009_ch_T0000098:7;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1249976	1250084	.	-	2	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000098;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03009_ch_T0000098:7;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1250085	1252998	.	-	.	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000098;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03009_ch_T0000098:7;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1252999	1253060	.	-	.	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000098;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03009_ch_T0000098:8;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1252999	1253060	.	-	1	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000098;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03009_ch_T0000098:8;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1253061	1257071	.	-	.	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000098;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03009_ch_T0000098:8;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1257072	1257119	.	-	.	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000098;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03009_ch_T0000098:9;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1257072	1257119	.	-	1	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000098;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03009_ch_T0000098:9;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1257120	1260160	.	-	.	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000098;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03009_ch_T0000098:9;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1260161	1260292	.	-	.	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000098;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03009_ch_T0000098:10;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1260161	1260222	.	-	0	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000098;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03009_ch_T0000098:10;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	1260220	1260222	.	-	0	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000098;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=start_codon:HG03009_ch_T0000098;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1260293	1270552	.	-	.	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000098;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03009_ch_T0000098:10;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1270553	1270714	.	-	.	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000098;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03009_ch_T0000098:11;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	1222665	1271561	100	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000099;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_G0000020;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=HG03009_ch_T0000099;Name=ASMTL
HG03009_chrY	CAT	exon	1222665	1223015	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000099;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03009_ch_T0000099:0;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1222795	1223015	.	-	2	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000099;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03009_ch_T0000099:0;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	1222795	1222797	.	-	0	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000099;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=stop_codon:HG03009_ch_T0000099;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1223016	1230466	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000099;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03009_ch_T0000099:0;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1230467	1230589	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000099;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03009_ch_T0000099:1;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1230467	1230589	.	-	2	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000099;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03009_ch_T0000099:1;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1230590	1235697	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000099;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03009_ch_T0000099:1;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1235698	1235841	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000099;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03009_ch_T0000099:2;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1235698	1235841	.	-	2	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000099;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03009_ch_T0000099:2;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1235842	1236706	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000099;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03009_ch_T0000099:2;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1236707	1236839	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000099;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03009_ch_T0000099:3;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1236707	1236839	.	-	0	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000099;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03009_ch_T0000099:3;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1236840	1239384	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000099;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03009_ch_T0000099:3;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1239385	1239569	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000099;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03009_ch_T0000099:4;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1239385	1239569	.	-	2	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000099;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03009_ch_T0000099:4;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1239570	1243204	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000099;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03009_ch_T0000099:4;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1243205	1243367	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000099;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03009_ch_T0000099:5;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1243205	1243367	.	-	0	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000099;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03009_ch_T0000099:5;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1243368	1245417	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000099;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03009_ch_T0000099:5;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1245418	1245805	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000099;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03009_ch_T0000099:6;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1245418	1245805	.	-	1	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000099;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03009_ch_T0000099:6;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1245806	1249975	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000099;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03009_ch_T0000099:6;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1249976	1250084	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000099;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03009_ch_T0000099:7;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1249976	1250084	.	-	2	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000099;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03009_ch_T0000099:7;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1250085	1252998	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000099;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03009_ch_T0000099:7;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1252999	1253060	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000099;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03009_ch_T0000099:8;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1252999	1253060	.	-	1	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000099;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03009_ch_T0000099:8;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1253061	1253669	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000099;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03009_ch_T0000099:8;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1253670	1253734	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000099;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03009_ch_T0000099:9;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1253670	1253734	.	-	0	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000099;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03009_ch_T0000099:9;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1253735	1257071	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000099;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03009_ch_T0000099:9;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1257072	1257119	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000099;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03009_ch_T0000099:10;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1257072	1257119	.	-	0	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000099;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03009_ch_T0000099:10;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1257120	1260160	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000099;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03009_ch_T0000099:10;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1260161	1260292	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000099;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03009_ch_T0000099:11;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1260161	1260211	.	-	0	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000099;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03009_ch_T0000099:11;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	1260209	1260211	.	-	0	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000099;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=start_codon:HG03009_ch_T0000099;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1260293	1271422	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000099;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03009_ch_T0000099:11;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1271423	1271561	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000099;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03009_ch_T0000099:12;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	1222665	1271561	100	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000100;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_G0000020;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=HG03009_ch_T0000100;Name=ASMTL
HG03009_chrY	CAT	exon	1222665	1223015	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000100;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03009_ch_T0000100:0;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1222795	1223015	.	-	2	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000100;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03009_ch_T0000100:0;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	1222795	1222797	.	-	0	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000100;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=stop_codon:HG03009_ch_T0000100;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1223016	1230466	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000100;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03009_ch_T0000100:0;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1230467	1230589	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000100;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03009_ch_T0000100:1;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1230467	1230589	.	-	2	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000100;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03009_ch_T0000100:1;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1230590	1235697	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000100;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03009_ch_T0000100:1;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1235698	1235841	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000100;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03009_ch_T0000100:2;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1235698	1235841	.	-	2	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000100;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03009_ch_T0000100:2;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1235842	1236706	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000100;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03009_ch_T0000100:2;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1236707	1236839	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000100;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03009_ch_T0000100:3;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1236707	1236839	.	-	0	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000100;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03009_ch_T0000100:3;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1236840	1239384	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000100;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03009_ch_T0000100:3;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1239385	1239569	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000100;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03009_ch_T0000100:4;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1239385	1239569	.	-	2	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000100;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03009_ch_T0000100:4;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1239570	1243204	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000100;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03009_ch_T0000100:4;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1243205	1243367	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000100;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03009_ch_T0000100:5;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1243205	1243367	.	-	0	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000100;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03009_ch_T0000100:5;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1243368	1245417	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000100;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03009_ch_T0000100:5;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1245418	1245805	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000100;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03009_ch_T0000100:6;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1245418	1245805	.	-	1	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000100;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03009_ch_T0000100:6;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1245806	1249975	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000100;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03009_ch_T0000100:6;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1249976	1250084	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000100;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03009_ch_T0000100:7;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1249976	1250084	.	-	2	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000100;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03009_ch_T0000100:7;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1250085	1252998	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000100;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03009_ch_T0000100:7;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1252999	1253060	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000100;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03009_ch_T0000100:8;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1252999	1253060	.	-	1	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000100;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03009_ch_T0000100:8;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1253061	1253669	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000100;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03009_ch_T0000100:8;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1253670	1253734	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000100;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03009_ch_T0000100:9;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1253670	1253734	.	-	0	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000100;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03009_ch_T0000100:9;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1253735	1257071	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000100;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03009_ch_T0000100:9;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1257072	1257119	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000100;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03009_ch_T0000100:10;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1257072	1257119	.	-	0	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000100;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03009_ch_T0000100:10;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1257120	1260160	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000100;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03009_ch_T0000100:10;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1260161	1260292	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000100;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03009_ch_T0000100:11;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1260161	1260292	.	-	0	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000100;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03009_ch_T0000100:11;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1260293	1270552	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000100;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03009_ch_T0000100:11;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1270553	1270711	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000100;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03009_ch_T0000100:12;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1270553	1270645	.	-	0	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000100;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03009_ch_T0000100:12;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	1270643	1270645	.	-	0	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000100;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=start_codon:HG03009_ch_T0000100;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1270712	1271422	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000100;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03009_ch_T0000100:12;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1271423	1271561	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000100;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03009_ch_T0000100:13;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	1222665	1271561	100	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000101;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_G0000020;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=HG03009_ch_T0000101;Name=ASMTL
HG03009_chrY	CAT	exon	1222665	1223015	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000101;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000101;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03009_ch_T0000101:0;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1222795	1223015	.	-	2	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000101;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000101;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03009_ch_T0000101:0;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	1222795	1222797	.	-	0	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000101;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000101;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=stop_codon:HG03009_ch_T0000101;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1223016	1230466	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000101;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000101;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03009_ch_T0000101:0;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1230467	1230589	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000101;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000101;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03009_ch_T0000101:1;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1230467	1230589	.	-	2	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000101;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000101;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03009_ch_T0000101:1;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1230590	1235697	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000101;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000101;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03009_ch_T0000101:1;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1235698	1235841	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000101;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000101;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03009_ch_T0000101:2;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1235698	1235841	.	-	2	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000101;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000101;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03009_ch_T0000101:2;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1235842	1236706	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000101;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000101;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03009_ch_T0000101:2;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1236707	1236839	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000101;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000101;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03009_ch_T0000101:3;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1236707	1236839	.	-	0	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000101;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000101;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03009_ch_T0000101:3;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1236840	1239384	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000101;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000101;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03009_ch_T0000101:3;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1239385	1239569	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000101;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000101;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03009_ch_T0000101:4;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1239385	1239569	.	-	2	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000101;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000101;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03009_ch_T0000101:4;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1239570	1243204	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000101;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000101;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03009_ch_T0000101:4;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1243205	1243367	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000101;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000101;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03009_ch_T0000101:5;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1243205	1243367	.	-	0	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000101;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000101;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03009_ch_T0000101:5;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1243368	1245417	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000101;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000101;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03009_ch_T0000101:5;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1245418	1245805	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000101;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000101;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03009_ch_T0000101:6;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1245418	1245805	.	-	1	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000101;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000101;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03009_ch_T0000101:6;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1245806	1249975	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000101;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000101;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03009_ch_T0000101:6;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1249976	1250084	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000101;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000101;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03009_ch_T0000101:7;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1249976	1250084	.	-	2	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000101;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000101;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03009_ch_T0000101:7;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1250085	1252998	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000101;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000101;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03009_ch_T0000101:7;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1252999	1253060	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000101;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000101;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03009_ch_T0000101:8;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1252999	1253060	.	-	1	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000101;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000101;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03009_ch_T0000101:8;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1253061	1257071	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000101;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000101;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03009_ch_T0000101:8;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1257072	1257119	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000101;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000101;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03009_ch_T0000101:9;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1257072	1257119	.	-	1	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000101;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000101;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03009_ch_T0000101:9;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1257120	1260160	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000101;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000101;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03009_ch_T0000101:9;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1260161	1260292	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000101;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000101;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03009_ch_T0000101:10;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1260161	1260222	.	-	0	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000101;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000101;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03009_ch_T0000101:10;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	1260220	1260222	.	-	0	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000101;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000101;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=start_codon:HG03009_ch_T0000101;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1260293	1271422	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000101;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000101;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03009_ch_T0000101:10;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1271423	1271561	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000101;gene_id=HG03009_ch_G0000020;Parent=HG03009_ch_T0000101;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03009_ch_T0000101:11;Name=ASMTL;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	1280711	1356150	.	-	.	source_gene_common_name=P2RY8;source_gene=hg002_chrY_paternal_27;alternative_source_transcripts=hg002_chrY_paternal_27.1,hg002_chrY_paternal_27.1;gene_id=HG03009_ch_G0000021;gene_biotype=protein_coding;gene_name=P2RY8;gene_sources=liftoff,augTM;ID=HG03009_ch_G0000021;Name=P2RY8
HG03009_chrY	CAT	transcript	1280711	1285850	100	-	.	source_transcript=hg002_chrY_paternal_27.1;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.1,hg002_chrY_paternal_27.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000102;gene_id=HG03009_ch_G0000021;Parent=HG03009_ch_G0000021;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=HG03009_ch_T0000102;Name=P2RY8
HG03009_chrY	CAT	exon	1280711	1284710	.	-	.	source_transcript=hg002_chrY_paternal_27.1;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.1,hg002_chrY_paternal_27.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000102;gene_id=HG03009_ch_G0000021;Parent=HG03009_ch_T0000102;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=exon:HG03009_ch_T0000102:0;Name=P2RY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1283607	1284686	.	-	0	source_transcript=hg002_chrY_paternal_27.1;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.1,hg002_chrY_paternal_27.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000102;gene_id=HG03009_ch_G0000021;Parent=HG03009_ch_T0000102;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=CDS:HG03009_ch_T0000102:0;Name=P2RY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	1283607	1283609	.	-	0	source_transcript=hg002_chrY_paternal_27.1;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.1,hg002_chrY_paternal_27.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000102;gene_id=HG03009_ch_G0000021;Parent=HG03009_ch_T0000102;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=stop_codon:HG03009_ch_T0000102;Name=P2RY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	1284684	1284686	.	-	0	source_transcript=hg002_chrY_paternal_27.1;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.1,hg002_chrY_paternal_27.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000102;gene_id=HG03009_ch_G0000021;Parent=HG03009_ch_T0000102;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=start_codon:HG03009_ch_T0000102;Name=P2RY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1284711	1285158	.	-	.	source_transcript=hg002_chrY_paternal_27.1;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.1,hg002_chrY_paternal_27.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000102;gene_id=HG03009_ch_G0000021;Parent=HG03009_ch_T0000102;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=intron:HG03009_ch_T0000102:0;Name=P2RY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1285159	1285850	.	-	.	source_transcript=hg002_chrY_paternal_27.1;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.1,hg002_chrY_paternal_27.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000102;gene_id=HG03009_ch_G0000021;Parent=HG03009_ch_T0000102;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=exon:HG03009_ch_T0000102:1;Name=P2RY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	1280711	1311992	100	-	.	source_transcript=hg002_chrY_paternal_27.2;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.2,hg002_chrY_paternal_27.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000103;gene_id=HG03009_ch_G0000021;Parent=HG03009_ch_G0000021;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=HG03009_ch_T0000103;Name=P2RY8
HG03009_chrY	CAT	exon	1280711	1284710	.	-	.	source_transcript=hg002_chrY_paternal_27.2;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.2,hg002_chrY_paternal_27.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000103;gene_id=HG03009_ch_G0000021;Parent=HG03009_ch_T0000103;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=exon:HG03009_ch_T0000103:0;Name=P2RY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1283607	1284686	.	-	0	source_transcript=hg002_chrY_paternal_27.2;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.2,hg002_chrY_paternal_27.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000103;gene_id=HG03009_ch_G0000021;Parent=HG03009_ch_T0000103;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=CDS:HG03009_ch_T0000103:0;Name=P2RY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	1283607	1283609	.	-	0	source_transcript=hg002_chrY_paternal_27.2;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.2,hg002_chrY_paternal_27.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000103;gene_id=HG03009_ch_G0000021;Parent=HG03009_ch_T0000103;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=stop_codon:HG03009_ch_T0000103;Name=P2RY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	1284684	1284686	.	-	0	source_transcript=hg002_chrY_paternal_27.2;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.2,hg002_chrY_paternal_27.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000103;gene_id=HG03009_ch_G0000021;Parent=HG03009_ch_T0000103;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=start_codon:HG03009_ch_T0000103;Name=P2RY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1284711	1311937	.	-	.	source_transcript=hg002_chrY_paternal_27.2;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.2,hg002_chrY_paternal_27.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000103;gene_id=HG03009_ch_G0000021;Parent=HG03009_ch_T0000103;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=intron:HG03009_ch_T0000103:0;Name=P2RY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1311938	1311992	.	-	.	source_transcript=hg002_chrY_paternal_27.2;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.2,hg002_chrY_paternal_27.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000103;gene_id=HG03009_ch_G0000021;Parent=HG03009_ch_T0000103;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=exon:HG03009_ch_T0000103:1;Name=P2RY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	1280711	1313652	100	-	.	source_transcript=hg002_chrY_paternal_27.3;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.3,hg002_chrY_paternal_27.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000104;gene_id=HG03009_ch_G0000021;Parent=HG03009_ch_G0000021;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=HG03009_ch_T0000104;Name=P2RY8
HG03009_chrY	CAT	exon	1280711	1284710	.	-	.	source_transcript=hg002_chrY_paternal_27.3;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.3,hg002_chrY_paternal_27.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000104;gene_id=HG03009_ch_G0000021;Parent=HG03009_ch_T0000104;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=exon:HG03009_ch_T0000104:0;Name=P2RY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1283607	1284686	.	-	0	source_transcript=hg002_chrY_paternal_27.3;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.3,hg002_chrY_paternal_27.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000104;gene_id=HG03009_ch_G0000021;Parent=HG03009_ch_T0000104;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=CDS:HG03009_ch_T0000104:0;Name=P2RY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	1283607	1283609	.	-	0	source_transcript=hg002_chrY_paternal_27.3;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.3,hg002_chrY_paternal_27.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000104;gene_id=HG03009_ch_G0000021;Parent=HG03009_ch_T0000104;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=stop_codon:HG03009_ch_T0000104;Name=P2RY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	1284684	1284686	.	-	0	source_transcript=hg002_chrY_paternal_27.3;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.3,hg002_chrY_paternal_27.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000104;gene_id=HG03009_ch_G0000021;Parent=HG03009_ch_T0000104;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=start_codon:HG03009_ch_T0000104;Name=P2RY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1284711	1313035	.	-	.	source_transcript=hg002_chrY_paternal_27.3;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.3,hg002_chrY_paternal_27.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000104;gene_id=HG03009_ch_G0000021;Parent=HG03009_ch_T0000104;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=intron:HG03009_ch_T0000104:0;Name=P2RY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1313036	1313652	.	-	.	source_transcript=hg002_chrY_paternal_27.3;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.3,hg002_chrY_paternal_27.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000104;gene_id=HG03009_ch_G0000021;Parent=HG03009_ch_T0000104;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=exon:HG03009_ch_T0000104:1;Name=P2RY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	1280711	1356150	100	-	.	source_transcript=hg002_chrY_paternal_27.4;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.4,hg002_chrY_paternal_27.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000105;gene_id=HG03009_ch_G0000021;Parent=HG03009_ch_G0000021;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=HG03009_ch_T0000105;Name=P2RY8
HG03009_chrY	CAT	exon	1280711	1284710	.	-	.	source_transcript=hg002_chrY_paternal_27.4;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.4,hg002_chrY_paternal_27.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000105;gene_id=HG03009_ch_G0000021;Parent=HG03009_ch_T0000105;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=exon:HG03009_ch_T0000105:0;Name=P2RY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1283607	1284686	.	-	0	source_transcript=hg002_chrY_paternal_27.4;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.4,hg002_chrY_paternal_27.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000105;gene_id=HG03009_ch_G0000021;Parent=HG03009_ch_T0000105;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=CDS:HG03009_ch_T0000105:0;Name=P2RY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	1283607	1283609	.	-	0	source_transcript=hg002_chrY_paternal_27.4;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.4,hg002_chrY_paternal_27.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000105;gene_id=HG03009_ch_G0000021;Parent=HG03009_ch_T0000105;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=stop_codon:HG03009_ch_T0000105;Name=P2RY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	1284684	1284686	.	-	0	source_transcript=hg002_chrY_paternal_27.4;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.4,hg002_chrY_paternal_27.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000105;gene_id=HG03009_ch_G0000021;Parent=HG03009_ch_T0000105;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=start_codon:HG03009_ch_T0000105;Name=P2RY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1284711	1355885	.	-	.	source_transcript=hg002_chrY_paternal_27.4;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.4,hg002_chrY_paternal_27.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000105;gene_id=HG03009_ch_G0000021;Parent=HG03009_ch_T0000105;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=intron:HG03009_ch_T0000105:0;Name=P2RY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1355886	1356150	.	-	.	source_transcript=hg002_chrY_paternal_27.4;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.4,hg002_chrY_paternal_27.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000105;gene_id=HG03009_ch_G0000021;Parent=HG03009_ch_T0000105;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=exon:HG03009_ch_T0000105:1;Name=P2RY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	1280711	1356150	100	-	.	source_transcript=hg002_chrY_paternal_27.5;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.5,hg002_chrY_paternal_27.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000106;gene_id=HG03009_ch_G0000021;Parent=HG03009_ch_G0000021;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=HG03009_ch_T0000106;Name=P2RY8
HG03009_chrY	CAT	exon	1280711	1284710	.	-	.	source_transcript=hg002_chrY_paternal_27.5;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.5,hg002_chrY_paternal_27.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000106;gene_id=HG03009_ch_G0000021;Parent=HG03009_ch_T0000106;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=exon:HG03009_ch_T0000106:0;Name=P2RY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1283607	1284686	.	-	0	source_transcript=hg002_chrY_paternal_27.5;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.5,hg002_chrY_paternal_27.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000106;gene_id=HG03009_ch_G0000021;Parent=HG03009_ch_T0000106;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=CDS:HG03009_ch_T0000106:0;Name=P2RY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	1283607	1283609	.	-	0	source_transcript=hg002_chrY_paternal_27.5;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.5,hg002_chrY_paternal_27.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000106;gene_id=HG03009_ch_G0000021;Parent=HG03009_ch_T0000106;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=stop_codon:HG03009_ch_T0000106;Name=P2RY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	1284684	1284686	.	-	0	source_transcript=hg002_chrY_paternal_27.5;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.5,hg002_chrY_paternal_27.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000106;gene_id=HG03009_ch_G0000021;Parent=HG03009_ch_T0000106;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=start_codon:HG03009_ch_T0000106;Name=P2RY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1284711	1286629	.	-	.	source_transcript=hg002_chrY_paternal_27.5;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.5,hg002_chrY_paternal_27.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000106;gene_id=HG03009_ch_G0000021;Parent=HG03009_ch_T0000106;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=intron:HG03009_ch_T0000106:0;Name=P2RY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1286630	1286798	.	-	.	source_transcript=hg002_chrY_paternal_27.5;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.5,hg002_chrY_paternal_27.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000106;gene_id=HG03009_ch_G0000021;Parent=HG03009_ch_T0000106;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=exon:HG03009_ch_T0000106:1;Name=P2RY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1286799	1355885	.	-	.	source_transcript=hg002_chrY_paternal_27.5;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.5,hg002_chrY_paternal_27.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000106;gene_id=HG03009_ch_G0000021;Parent=HG03009_ch_T0000106;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=intron:HG03009_ch_T0000106:1;Name=P2RY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1355886	1356150	.	-	.	source_transcript=hg002_chrY_paternal_27.5;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.5,hg002_chrY_paternal_27.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000106;gene_id=HG03009_ch_G0000021;Parent=HG03009_ch_T0000106;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=exon:HG03009_ch_T0000106:2;Name=P2RY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	1410673	1421496	.	+	.	source_gene_common_name=AKAP17A;source_gene=hg002_chrY_paternal_28;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;gene_id=HG03009_ch_G0000022;gene_biotype=protein_coding;gene_name=AKAP17A;gene_sources=liftoff,augTM;ID=HG03009_ch_G0000022;Name=AKAP17A
HG03009_chrY	CAT	transcript	1410673	1421496	100	+	.	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000107;gene_id=HG03009_ch_G0000022;Parent=HG03009_ch_G0000022;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=HG03009_ch_T0000107;Name=AKAP17A
HG03009_chrY	CAT	exon	1410673	1410838	.	+	.	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000107;gene_id=HG03009_ch_G0000022;Parent=HG03009_ch_T0000107;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=exon:HG03009_ch_T0000107:0;Name=AKAP17A;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1410839	1412512	.	+	.	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000107;gene_id=HG03009_ch_G0000022;Parent=HG03009_ch_T0000107;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=intron:HG03009_ch_T0000107:0;Name=AKAP17A;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1412513	1413293	.	+	.	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000107;gene_id=HG03009_ch_G0000022;Parent=HG03009_ch_T0000107;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=exon:HG03009_ch_T0000107:1;Name=AKAP17A;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1412532	1413293	.	+	0	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000107;gene_id=HG03009_ch_G0000022;Parent=HG03009_ch_T0000107;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=CDS:HG03009_ch_T0000107:0;Name=AKAP17A;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	1412532	1412534	.	+	0	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000107;gene_id=HG03009_ch_G0000022;Parent=HG03009_ch_T0000107;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=start_codon:HG03009_ch_T0000107;Name=AKAP17A;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1413294	1414424	.	+	.	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000107;gene_id=HG03009_ch_G0000022;Parent=HG03009_ch_T0000107;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=intron:HG03009_ch_T0000107:1;Name=AKAP17A;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1414425	1414573	.	+	.	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000107;gene_id=HG03009_ch_G0000022;Parent=HG03009_ch_T0000107;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=exon:HG03009_ch_T0000107:2;Name=AKAP17A;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1414425	1414573	.	+	0	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000107;gene_id=HG03009_ch_G0000022;Parent=HG03009_ch_T0000107;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=CDS:HG03009_ch_T0000107:1;Name=AKAP17A;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1414574	1418167	.	+	.	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000107;gene_id=HG03009_ch_G0000022;Parent=HG03009_ch_T0000107;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=intron:HG03009_ch_T0000107:2;Name=AKAP17A;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1418168	1418408	.	+	.	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000107;gene_id=HG03009_ch_G0000022;Parent=HG03009_ch_T0000107;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=exon:HG03009_ch_T0000107:3;Name=AKAP17A;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1418168	1418408	.	+	1	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000107;gene_id=HG03009_ch_G0000022;Parent=HG03009_ch_T0000107;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=CDS:HG03009_ch_T0000107:2;Name=AKAP17A;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1418409	1419634	.	+	.	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000107;gene_id=HG03009_ch_G0000022;Parent=HG03009_ch_T0000107;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=intron:HG03009_ch_T0000107:3;Name=AKAP17A;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1419635	1421496	.	+	.	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000107;gene_id=HG03009_ch_G0000022;Parent=HG03009_ch_T0000107;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=exon:HG03009_ch_T0000107:4;Name=AKAP17A;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1419635	1420570	.	+	0	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000107;gene_id=HG03009_ch_G0000022;Parent=HG03009_ch_T0000107;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=CDS:HG03009_ch_T0000107:3;Name=AKAP17A;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	1420568	1420570	.	+	0	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000107;gene_id=HG03009_ch_G0000022;Parent=HG03009_ch_T0000107;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=stop_codon:HG03009_ch_T0000107;Name=AKAP17A;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	1410673	1421496	1000	+	.	source_transcript=hg002_chrY_paternal_28.2;source_transcript_name=hg002_chrY_paternal_28.1;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_28.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.2,hg002_chrY_paternal_28.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000108;gene_id=HG03009_ch_G0000022;Parent=HG03009_ch_G0000022;transcript_name=hg002_chrY_paternal_28.1;gene_name=AKAP17A;ID=HG03009_ch_T0000108;Name=AKAP17A
HG03009_chrY	CAT	exon	1410673	1410838	.	+	.	source_transcript=hg002_chrY_paternal_28.2;source_transcript_name=hg002_chrY_paternal_28.1;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_28.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.2,hg002_chrY_paternal_28.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000108;gene_id=HG03009_ch_G0000022;Parent=HG03009_ch_T0000108;transcript_name=hg002_chrY_paternal_28.1;gene_name=AKAP17A;ID=exon:HG03009_ch_T0000108:0;Name=AKAP17A;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1410839	1412512	.	+	.	source_transcript=hg002_chrY_paternal_28.2;source_transcript_name=hg002_chrY_paternal_28.1;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_28.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.2,hg002_chrY_paternal_28.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000108;gene_id=HG03009_ch_G0000022;Parent=HG03009_ch_T0000108;transcript_name=hg002_chrY_paternal_28.1;gene_name=AKAP17A;ID=intron:HG03009_ch_T0000108:0;Name=AKAP17A;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1412513	1413293	.	+	.	source_transcript=hg002_chrY_paternal_28.2;source_transcript_name=hg002_chrY_paternal_28.1;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_28.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.2,hg002_chrY_paternal_28.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000108;gene_id=HG03009_ch_G0000022;Parent=HG03009_ch_T0000108;transcript_name=hg002_chrY_paternal_28.1;gene_name=AKAP17A;ID=exon:HG03009_ch_T0000108:1;Name=AKAP17A;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1413294	1414424	.	+	.	source_transcript=hg002_chrY_paternal_28.2;source_transcript_name=hg002_chrY_paternal_28.1;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_28.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.2,hg002_chrY_paternal_28.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000108;gene_id=HG03009_ch_G0000022;Parent=HG03009_ch_T0000108;transcript_name=hg002_chrY_paternal_28.1;gene_name=AKAP17A;ID=intron:HG03009_ch_T0000108:1;Name=AKAP17A;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1414425	1414573	.	+	.	source_transcript=hg002_chrY_paternal_28.2;source_transcript_name=hg002_chrY_paternal_28.1;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_28.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.2,hg002_chrY_paternal_28.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000108;gene_id=HG03009_ch_G0000022;Parent=HG03009_ch_T0000108;transcript_name=hg002_chrY_paternal_28.1;gene_name=AKAP17A;ID=exon:HG03009_ch_T0000108:2;Name=AKAP17A;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1414574	1418167	.	+	.	source_transcript=hg002_chrY_paternal_28.2;source_transcript_name=hg002_chrY_paternal_28.1;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_28.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.2,hg002_chrY_paternal_28.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000108;gene_id=HG03009_ch_G0000022;Parent=HG03009_ch_T0000108;transcript_name=hg002_chrY_paternal_28.1;gene_name=AKAP17A;ID=intron:HG03009_ch_T0000108:2;Name=AKAP17A;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1418168	1418408	.	+	.	source_transcript=hg002_chrY_paternal_28.2;source_transcript_name=hg002_chrY_paternal_28.1;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_28.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.2,hg002_chrY_paternal_28.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000108;gene_id=HG03009_ch_G0000022;Parent=HG03009_ch_T0000108;transcript_name=hg002_chrY_paternal_28.1;gene_name=AKAP17A;ID=exon:HG03009_ch_T0000108:3;Name=AKAP17A;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1418409	1419113	.	+	.	source_transcript=hg002_chrY_paternal_28.2;source_transcript_name=hg002_chrY_paternal_28.1;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_28.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.2,hg002_chrY_paternal_28.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000108;gene_id=HG03009_ch_G0000022;Parent=HG03009_ch_T0000108;transcript_name=hg002_chrY_paternal_28.1;gene_name=AKAP17A;ID=intron:HG03009_ch_T0000108:3;Name=AKAP17A;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1419114	1419183	.	+	.	source_transcript=hg002_chrY_paternal_28.2;source_transcript_name=hg002_chrY_paternal_28.1;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_28.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.2,hg002_chrY_paternal_28.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000108;gene_id=HG03009_ch_G0000022;Parent=HG03009_ch_T0000108;transcript_name=hg002_chrY_paternal_28.1;gene_name=AKAP17A;ID=exon:HG03009_ch_T0000108:4;Name=AKAP17A;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1419184	1419634	.	+	.	source_transcript=hg002_chrY_paternal_28.2;source_transcript_name=hg002_chrY_paternal_28.1;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_28.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.2,hg002_chrY_paternal_28.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000108;gene_id=HG03009_ch_G0000022;Parent=HG03009_ch_T0000108;transcript_name=hg002_chrY_paternal_28.1;gene_name=AKAP17A;ID=intron:HG03009_ch_T0000108:4;Name=AKAP17A;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1419635	1421496	.	+	.	source_transcript=hg002_chrY_paternal_28.2;source_transcript_name=hg002_chrY_paternal_28.1;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_28.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.2,hg002_chrY_paternal_28.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000108;gene_id=HG03009_ch_G0000022;Parent=HG03009_ch_T0000108;transcript_name=hg002_chrY_paternal_28.1;gene_name=AKAP17A;ID=exon:HG03009_ch_T0000108:5;Name=AKAP17A;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	1414496	1457433	.	+	.	source_gene_common_name=ASMT;source_gene=hg002_chrY_paternal_29;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;gene_id=HG03009_ch_G0000023;gene_biotype=protein_coding;gene_name=ASMT;gene_sources=liftoff,augTM;ID=HG03009_ch_G0000023;Name=ASMT
HG03009_chrY	CAT	transcript	1414496	1457433	100	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000109;gene_id=HG03009_ch_G0000023;Parent=HG03009_ch_G0000023;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=HG03009_ch_T0000109;Name=ASMT
HG03009_chrY	CAT	exon	1414496	1414573	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000109;gene_id=HG03009_ch_G0000023;Parent=HG03009_ch_T0000109;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG03009_ch_T0000109:0;Name=ASMT;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1414574	1433685	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000109;gene_id=HG03009_ch_G0000023;Parent=HG03009_ch_T0000109;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG03009_ch_T0000109:0;Name=ASMT;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1433686	1433821	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000109;gene_id=HG03009_ch_G0000023;Parent=HG03009_ch_T0000109;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG03009_ch_T0000109:1;Name=ASMT;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1433753	1433821	.	+	0	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000109;gene_id=HG03009_ch_G0000023;Parent=HG03009_ch_T0000109;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG03009_ch_T0000109:0;Name=ASMT;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	1433753	1433755	.	+	0	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000109;gene_id=HG03009_ch_G0000023;Parent=HG03009_ch_T0000109;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=start_codon:HG03009_ch_T0000109;Name=ASMT;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1433822	1441680	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000109;gene_id=HG03009_ch_G0000023;Parent=HG03009_ch_T0000109;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG03009_ch_T0000109:1;Name=ASMT;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1441681	1441855	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000109;gene_id=HG03009_ch_G0000023;Parent=HG03009_ch_T0000109;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG03009_ch_T0000109:2;Name=ASMT;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1441681	1441855	.	+	0	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000109;gene_id=HG03009_ch_G0000023;Parent=HG03009_ch_T0000109;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG03009_ch_T0000109:1;Name=ASMT;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1441856	1442810	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000109;gene_id=HG03009_ch_G0000023;Parent=HG03009_ch_T0000109;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG03009_ch_T0000109:2;Name=ASMT;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1442811	1442940	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000109;gene_id=HG03009_ch_G0000023;Parent=HG03009_ch_T0000109;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG03009_ch_T0000109:3;Name=ASMT;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1442811	1442940	.	+	2	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000109;gene_id=HG03009_ch_G0000023;Parent=HG03009_ch_T0000109;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG03009_ch_T0000109:2;Name=ASMT;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1442941	1446162	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000109;gene_id=HG03009_ch_G0000023;Parent=HG03009_ch_T0000109;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG03009_ch_T0000109:3;Name=ASMT;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1446163	1446231	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000109;gene_id=HG03009_ch_G0000023;Parent=HG03009_ch_T0000109;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG03009_ch_T0000109:4;Name=ASMT;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1446163	1446231	.	+	1	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000109;gene_id=HG03009_ch_G0000023;Parent=HG03009_ch_T0000109;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG03009_ch_T0000109:3;Name=ASMT;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1446232	1448283	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000109;gene_id=HG03009_ch_G0000023;Parent=HG03009_ch_T0000109;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG03009_ch_T0000109:4;Name=ASMT;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1448284	1448402	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000109;gene_id=HG03009_ch_G0000023;Parent=HG03009_ch_T0000109;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG03009_ch_T0000109:5;Name=ASMT;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1448284	1448402	.	+	1	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000109;gene_id=HG03009_ch_G0000023;Parent=HG03009_ch_T0000109;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG03009_ch_T0000109:4;Name=ASMT;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1448403	1451171	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000109;gene_id=HG03009_ch_G0000023;Parent=HG03009_ch_T0000109;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG03009_ch_T0000109:5;Name=ASMT;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1451172	1451255	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000109;gene_id=HG03009_ch_G0000023;Parent=HG03009_ch_T0000109;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG03009_ch_T0000109:6;Name=ASMT;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1451172	1451255	.	+	2	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000109;gene_id=HG03009_ch_G0000023;Parent=HG03009_ch_T0000109;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG03009_ch_T0000109:5;Name=ASMT;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1451256	1451616	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000109;gene_id=HG03009_ch_G0000023;Parent=HG03009_ch_T0000109;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG03009_ch_T0000109:6;Name=ASMT;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1451617	1451757	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000109;gene_id=HG03009_ch_G0000023;Parent=HG03009_ch_T0000109;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG03009_ch_T0000109:7;Name=ASMT;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1451617	1451757	.	+	2	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000109;gene_id=HG03009_ch_G0000023;Parent=HG03009_ch_T0000109;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG03009_ch_T0000109:6;Name=ASMT;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1451758	1454903	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000109;gene_id=HG03009_ch_G0000023;Parent=HG03009_ch_T0000109;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG03009_ch_T0000109:7;Name=ASMT;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1454904	1455026	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000109;gene_id=HG03009_ch_G0000023;Parent=HG03009_ch_T0000109;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG03009_ch_T0000109:8;Name=ASMT;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1454904	1455026	.	+	2	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000109;gene_id=HG03009_ch_G0000023;Parent=HG03009_ch_T0000109;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG03009_ch_T0000109:7;Name=ASMT;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1455027	1457154	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000109;gene_id=HG03009_ch_G0000023;Parent=HG03009_ch_T0000109;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG03009_ch_T0000109:8;Name=ASMT;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1457155	1457433	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000109;gene_id=HG03009_ch_G0000023;Parent=HG03009_ch_T0000109;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG03009_ch_T0000109:9;Name=ASMT;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1457155	1457366	.	+	2	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000109;gene_id=HG03009_ch_G0000023;Parent=HG03009_ch_T0000109;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG03009_ch_T0000109:8;Name=ASMT;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	1457364	1457366	.	+	0	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000109;gene_id=HG03009_ch_G0000023;Parent=HG03009_ch_T0000109;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=stop_codon:HG03009_ch_T0000109;Name=ASMT;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	1433612	1457433	100	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000110;gene_id=HG03009_ch_G0000023;Parent=HG03009_ch_G0000023;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=HG03009_ch_T0000110;Name=ASMT
HG03009_chrY	CAT	exon	1433612	1433821	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000110;gene_id=HG03009_ch_G0000023;Parent=HG03009_ch_T0000110;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG03009_ch_T0000110:0;Name=ASMT;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1433753	1433821	.	+	0	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000110;gene_id=HG03009_ch_G0000023;Parent=HG03009_ch_T0000110;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG03009_ch_T0000110:0;Name=ASMT;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	1433753	1433755	.	+	0	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000110;gene_id=HG03009_ch_G0000023;Parent=HG03009_ch_T0000110;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=start_codon:HG03009_ch_T0000110;Name=ASMT;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1433822	1441680	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000110;gene_id=HG03009_ch_G0000023;Parent=HG03009_ch_T0000110;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG03009_ch_T0000110:0;Name=ASMT;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1441681	1441855	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000110;gene_id=HG03009_ch_G0000023;Parent=HG03009_ch_T0000110;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG03009_ch_T0000110:1;Name=ASMT;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1441681	1441855	.	+	0	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000110;gene_id=HG03009_ch_G0000023;Parent=HG03009_ch_T0000110;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG03009_ch_T0000110:1;Name=ASMT;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1441856	1442810	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000110;gene_id=HG03009_ch_G0000023;Parent=HG03009_ch_T0000110;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG03009_ch_T0000110:1;Name=ASMT;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1442811	1442940	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000110;gene_id=HG03009_ch_G0000023;Parent=HG03009_ch_T0000110;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG03009_ch_T0000110:2;Name=ASMT;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1442811	1442940	.	+	2	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000110;gene_id=HG03009_ch_G0000023;Parent=HG03009_ch_T0000110;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG03009_ch_T0000110:2;Name=ASMT;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1442941	1446162	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000110;gene_id=HG03009_ch_G0000023;Parent=HG03009_ch_T0000110;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG03009_ch_T0000110:2;Name=ASMT;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1446163	1446231	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000110;gene_id=HG03009_ch_G0000023;Parent=HG03009_ch_T0000110;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG03009_ch_T0000110:3;Name=ASMT;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1446163	1446231	.	+	1	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000110;gene_id=HG03009_ch_G0000023;Parent=HG03009_ch_T0000110;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG03009_ch_T0000110:3;Name=ASMT;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1446232	1448283	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000110;gene_id=HG03009_ch_G0000023;Parent=HG03009_ch_T0000110;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG03009_ch_T0000110:3;Name=ASMT;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1448284	1448402	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000110;gene_id=HG03009_ch_G0000023;Parent=HG03009_ch_T0000110;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG03009_ch_T0000110:4;Name=ASMT;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1448284	1448402	.	+	1	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000110;gene_id=HG03009_ch_G0000023;Parent=HG03009_ch_T0000110;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG03009_ch_T0000110:4;Name=ASMT;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1448403	1451171	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000110;gene_id=HG03009_ch_G0000023;Parent=HG03009_ch_T0000110;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG03009_ch_T0000110:4;Name=ASMT;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1451172	1451255	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000110;gene_id=HG03009_ch_G0000023;Parent=HG03009_ch_T0000110;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG03009_ch_T0000110:5;Name=ASMT;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1451172	1451255	.	+	2	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000110;gene_id=HG03009_ch_G0000023;Parent=HG03009_ch_T0000110;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG03009_ch_T0000110:5;Name=ASMT;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1451256	1451616	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000110;gene_id=HG03009_ch_G0000023;Parent=HG03009_ch_T0000110;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG03009_ch_T0000110:5;Name=ASMT;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1451617	1451757	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000110;gene_id=HG03009_ch_G0000023;Parent=HG03009_ch_T0000110;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG03009_ch_T0000110:6;Name=ASMT;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1451617	1451757	.	+	2	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000110;gene_id=HG03009_ch_G0000023;Parent=HG03009_ch_T0000110;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG03009_ch_T0000110:6;Name=ASMT;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1451758	1454903	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000110;gene_id=HG03009_ch_G0000023;Parent=HG03009_ch_T0000110;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG03009_ch_T0000110:6;Name=ASMT;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1454904	1455026	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000110;gene_id=HG03009_ch_G0000023;Parent=HG03009_ch_T0000110;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG03009_ch_T0000110:7;Name=ASMT;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1454904	1455026	.	+	2	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000110;gene_id=HG03009_ch_G0000023;Parent=HG03009_ch_T0000110;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG03009_ch_T0000110:7;Name=ASMT;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1455027	1457154	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000110;gene_id=HG03009_ch_G0000023;Parent=HG03009_ch_T0000110;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG03009_ch_T0000110:7;Name=ASMT;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1457155	1457433	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000110;gene_id=HG03009_ch_G0000023;Parent=HG03009_ch_T0000110;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG03009_ch_T0000110:8;Name=ASMT;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1457155	1457366	.	+	2	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000110;gene_id=HG03009_ch_G0000023;Parent=HG03009_ch_T0000110;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG03009_ch_T0000110:8;Name=ASMT;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	1457364	1457366	.	+	0	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000110;gene_id=HG03009_ch_G0000023;Parent=HG03009_ch_T0000110;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=stop_codon:HG03009_ch_T0000110;Name=ASMT;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	1433686	1457433	100	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000111;gene_id=HG03009_ch_G0000023;Parent=HG03009_ch_G0000023;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=HG03009_ch_T0000111;Name=ASMT
HG03009_chrY	CAT	exon	1433686	1433821	.	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000111;gene_id=HG03009_ch_G0000023;Parent=HG03009_ch_T0000111;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG03009_ch_T0000111:0;Name=ASMT;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1433753	1433821	.	+	0	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000111;gene_id=HG03009_ch_G0000023;Parent=HG03009_ch_T0000111;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG03009_ch_T0000111:0;Name=ASMT;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	1433753	1433755	.	+	0	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000111;gene_id=HG03009_ch_G0000023;Parent=HG03009_ch_T0000111;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=start_codon:HG03009_ch_T0000111;Name=ASMT;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1433822	1441680	.	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000111;gene_id=HG03009_ch_G0000023;Parent=HG03009_ch_T0000111;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG03009_ch_T0000111:0;Name=ASMT;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1441681	1441855	.	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000111;gene_id=HG03009_ch_G0000023;Parent=HG03009_ch_T0000111;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG03009_ch_T0000111:1;Name=ASMT;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1441681	1441855	.	+	0	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000111;gene_id=HG03009_ch_G0000023;Parent=HG03009_ch_T0000111;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG03009_ch_T0000111:1;Name=ASMT;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1441856	1442810	.	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000111;gene_id=HG03009_ch_G0000023;Parent=HG03009_ch_T0000111;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG03009_ch_T0000111:1;Name=ASMT;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1442811	1442940	.	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000111;gene_id=HG03009_ch_G0000023;Parent=HG03009_ch_T0000111;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG03009_ch_T0000111:2;Name=ASMT;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1442811	1442940	.	+	2	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000111;gene_id=HG03009_ch_G0000023;Parent=HG03009_ch_T0000111;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG03009_ch_T0000111:2;Name=ASMT;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1442941	1446162	.	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000111;gene_id=HG03009_ch_G0000023;Parent=HG03009_ch_T0000111;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG03009_ch_T0000111:2;Name=ASMT;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1446163	1446231	.	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000111;gene_id=HG03009_ch_G0000023;Parent=HG03009_ch_T0000111;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG03009_ch_T0000111:3;Name=ASMT;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1446163	1446231	.	+	1	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000111;gene_id=HG03009_ch_G0000023;Parent=HG03009_ch_T0000111;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG03009_ch_T0000111:3;Name=ASMT;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1446232	1448283	.	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000111;gene_id=HG03009_ch_G0000023;Parent=HG03009_ch_T0000111;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG03009_ch_T0000111:3;Name=ASMT;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1448284	1448402	.	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000111;gene_id=HG03009_ch_G0000023;Parent=HG03009_ch_T0000111;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG03009_ch_T0000111:4;Name=ASMT;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1448284	1448402	.	+	1	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000111;gene_id=HG03009_ch_G0000023;Parent=HG03009_ch_T0000111;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG03009_ch_T0000111:4;Name=ASMT;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1448403	1454903	.	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000111;gene_id=HG03009_ch_G0000023;Parent=HG03009_ch_T0000111;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG03009_ch_T0000111:4;Name=ASMT;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1454904	1455026	.	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000111;gene_id=HG03009_ch_G0000023;Parent=HG03009_ch_T0000111;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG03009_ch_T0000111:5;Name=ASMT;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1454904	1455026	.	+	2	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000111;gene_id=HG03009_ch_G0000023;Parent=HG03009_ch_T0000111;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG03009_ch_T0000111:5;Name=ASMT;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1455027	1457154	.	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000111;gene_id=HG03009_ch_G0000023;Parent=HG03009_ch_T0000111;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG03009_ch_T0000111:5;Name=ASMT;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1457155	1457433	.	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000111;gene_id=HG03009_ch_G0000023;Parent=HG03009_ch_T0000111;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG03009_ch_T0000111:6;Name=ASMT;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1457155	1457366	.	+	2	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000111;gene_id=HG03009_ch_G0000023;Parent=HG03009_ch_T0000111;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG03009_ch_T0000111:6;Name=ASMT;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	1457364	1457366	.	+	0	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000111;gene_id=HG03009_ch_G0000023;Parent=HG03009_ch_T0000111;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=stop_codon:HG03009_ch_T0000111;Name=ASMT;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	1546136	1569889	.	+	.	source_gene_common_name=LINC02968;source_gene=hg002_chrY_paternal_30;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;gene_id=HG03009_ch_G0000024;gene_biotype=lncRNA;gene_name=LINC02968;gene_sources=liftoff;ID=HG03009_ch_G0000024;Name=LINC02968
HG03009_chrY	CAT	transcript	1546136	1569889	1000	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=HG03009_ch_T0000112;gene_id=HG03009_ch_G0000024;Parent=HG03009_ch_G0000024;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=HG03009_ch_T0000112;Name=LINC02968
HG03009_chrY	CAT	exon	1546136	1546440	.	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=HG03009_ch_T0000112;gene_id=HG03009_ch_G0000024;Parent=HG03009_ch_T0000112;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03009_ch_T0000112:0;Name=LINC02968;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1546441	1547670	.	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=HG03009_ch_T0000112;gene_id=HG03009_ch_G0000024;Parent=HG03009_ch_T0000112;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03009_ch_T0000112:0;Name=LINC02968;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1547671	1547914	.	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=HG03009_ch_T0000112;gene_id=HG03009_ch_G0000024;Parent=HG03009_ch_T0000112;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03009_ch_T0000112:1;Name=LINC02968;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1547915	1557383	.	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=HG03009_ch_T0000112;gene_id=HG03009_ch_G0000024;Parent=HG03009_ch_T0000112;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03009_ch_T0000112:1;Name=LINC02968;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1557384	1557597	.	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=HG03009_ch_T0000112;gene_id=HG03009_ch_G0000024;Parent=HG03009_ch_T0000112;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03009_ch_T0000112:2;Name=LINC02968;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1557598	1557690	.	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=HG03009_ch_T0000112;gene_id=HG03009_ch_G0000024;Parent=HG03009_ch_T0000112;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03009_ch_T0000112:2;Name=LINC02968;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1557691	1558476	.	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=HG03009_ch_T0000112;gene_id=HG03009_ch_G0000024;Parent=HG03009_ch_T0000112;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03009_ch_T0000112:3;Name=LINC02968;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1558477	1561193	.	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=HG03009_ch_T0000112;gene_id=HG03009_ch_G0000024;Parent=HG03009_ch_T0000112;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03009_ch_T0000112:3;Name=LINC02968;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1561194	1561446	.	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=HG03009_ch_T0000112;gene_id=HG03009_ch_G0000024;Parent=HG03009_ch_T0000112;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03009_ch_T0000112:4;Name=LINC02968;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1561447	1565189	.	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=HG03009_ch_T0000112;gene_id=HG03009_ch_G0000024;Parent=HG03009_ch_T0000112;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03009_ch_T0000112:4;Name=LINC02968;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1565190	1565249	.	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=HG03009_ch_T0000112;gene_id=HG03009_ch_G0000024;Parent=HG03009_ch_T0000112;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03009_ch_T0000112:5;Name=LINC02968;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1565250	1569588	.	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=HG03009_ch_T0000112;gene_id=HG03009_ch_G0000024;Parent=HG03009_ch_T0000112;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03009_ch_T0000112:5;Name=LINC02968;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1569589	1569889	.	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=HG03009_ch_T0000112;gene_id=HG03009_ch_G0000024;Parent=HG03009_ch_T0000112;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03009_ch_T0000112:6;Name=LINC02968;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	1546190	1569889	1000	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=HG03009_ch_T0000113;gene_id=HG03009_ch_G0000024;Parent=HG03009_ch_G0000024;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=HG03009_ch_T0000113;Name=LINC02968
HG03009_chrY	CAT	exon	1546190	1546440	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=HG03009_ch_T0000113;gene_id=HG03009_ch_G0000024;Parent=HG03009_ch_T0000113;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03009_ch_T0000113:0;Name=LINC02968;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1546441	1547667	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=HG03009_ch_T0000113;gene_id=HG03009_ch_G0000024;Parent=HG03009_ch_T0000113;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03009_ch_T0000113:0;Name=LINC02968;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1547668	1547929	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=HG03009_ch_T0000113;gene_id=HG03009_ch_G0000024;Parent=HG03009_ch_T0000113;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03009_ch_T0000113:1;Name=LINC02968;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1547930	1555834	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=HG03009_ch_T0000113;gene_id=HG03009_ch_G0000024;Parent=HG03009_ch_T0000113;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03009_ch_T0000113:1;Name=LINC02968;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1555835	1555930	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=HG03009_ch_T0000113;gene_id=HG03009_ch_G0000024;Parent=HG03009_ch_T0000113;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03009_ch_T0000113:2;Name=LINC02968;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1555931	1557186	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=HG03009_ch_T0000113;gene_id=HG03009_ch_G0000024;Parent=HG03009_ch_T0000113;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03009_ch_T0000113:2;Name=LINC02968;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1557187	1557597	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=HG03009_ch_T0000113;gene_id=HG03009_ch_G0000024;Parent=HG03009_ch_T0000113;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03009_ch_T0000113:3;Name=LINC02968;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1557598	1557690	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=HG03009_ch_T0000113;gene_id=HG03009_ch_G0000024;Parent=HG03009_ch_T0000113;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03009_ch_T0000113:3;Name=LINC02968;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1557691	1558476	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=HG03009_ch_T0000113;gene_id=HG03009_ch_G0000024;Parent=HG03009_ch_T0000113;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03009_ch_T0000113:4;Name=LINC02968;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1558477	1561193	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=HG03009_ch_T0000113;gene_id=HG03009_ch_G0000024;Parent=HG03009_ch_T0000113;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03009_ch_T0000113:4;Name=LINC02968;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1561194	1561446	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=HG03009_ch_T0000113;gene_id=HG03009_ch_G0000024;Parent=HG03009_ch_T0000113;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03009_ch_T0000113:5;Name=LINC02968;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1561447	1565189	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=HG03009_ch_T0000113;gene_id=HG03009_ch_G0000024;Parent=HG03009_ch_T0000113;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03009_ch_T0000113:5;Name=LINC02968;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1565190	1565249	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=HG03009_ch_T0000113;gene_id=HG03009_ch_G0000024;Parent=HG03009_ch_T0000113;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03009_ch_T0000113:6;Name=LINC02968;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1565250	1569588	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=HG03009_ch_T0000113;gene_id=HG03009_ch_G0000024;Parent=HG03009_ch_T0000113;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03009_ch_T0000113:6;Name=LINC02968;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1569589	1569889	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=HG03009_ch_T0000113;gene_id=HG03009_ch_G0000024;Parent=HG03009_ch_T0000113;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03009_ch_T0000113:7;Name=LINC02968;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	1546273	1569889	1000	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=HG03009_ch_T0000114;gene_id=HG03009_ch_G0000024;Parent=HG03009_ch_G0000024;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=HG03009_ch_T0000114;Name=LINC02968
HG03009_chrY	CAT	exon	1546273	1546440	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=HG03009_ch_T0000114;gene_id=HG03009_ch_G0000024;Parent=HG03009_ch_T0000114;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03009_ch_T0000114:0;Name=LINC02968;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1546441	1547667	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=HG03009_ch_T0000114;gene_id=HG03009_ch_G0000024;Parent=HG03009_ch_T0000114;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03009_ch_T0000114:0;Name=LINC02968;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1547668	1547914	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=HG03009_ch_T0000114;gene_id=HG03009_ch_G0000024;Parent=HG03009_ch_T0000114;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03009_ch_T0000114:1;Name=LINC02968;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1547915	1555834	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=HG03009_ch_T0000114;gene_id=HG03009_ch_G0000024;Parent=HG03009_ch_T0000114;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03009_ch_T0000114:1;Name=LINC02968;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1555835	1555930	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=HG03009_ch_T0000114;gene_id=HG03009_ch_G0000024;Parent=HG03009_ch_T0000114;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03009_ch_T0000114:2;Name=LINC02968;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1555931	1557383	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=HG03009_ch_T0000114;gene_id=HG03009_ch_G0000024;Parent=HG03009_ch_T0000114;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03009_ch_T0000114:2;Name=LINC02968;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1557384	1557597	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=HG03009_ch_T0000114;gene_id=HG03009_ch_G0000024;Parent=HG03009_ch_T0000114;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03009_ch_T0000114:3;Name=LINC02968;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1557598	1557690	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=HG03009_ch_T0000114;gene_id=HG03009_ch_G0000024;Parent=HG03009_ch_T0000114;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03009_ch_T0000114:3;Name=LINC02968;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1557691	1558476	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=HG03009_ch_T0000114;gene_id=HG03009_ch_G0000024;Parent=HG03009_ch_T0000114;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03009_ch_T0000114:4;Name=LINC02968;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1558477	1561193	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=HG03009_ch_T0000114;gene_id=HG03009_ch_G0000024;Parent=HG03009_ch_T0000114;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03009_ch_T0000114:4;Name=LINC02968;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1561194	1561446	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=HG03009_ch_T0000114;gene_id=HG03009_ch_G0000024;Parent=HG03009_ch_T0000114;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03009_ch_T0000114:5;Name=LINC02968;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1561447	1565189	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=HG03009_ch_T0000114;gene_id=HG03009_ch_G0000024;Parent=HG03009_ch_T0000114;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03009_ch_T0000114:5;Name=LINC02968;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1565190	1565249	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=HG03009_ch_T0000114;gene_id=HG03009_ch_G0000024;Parent=HG03009_ch_T0000114;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03009_ch_T0000114:6;Name=LINC02968;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1565250	1569588	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=HG03009_ch_T0000114;gene_id=HG03009_ch_G0000024;Parent=HG03009_ch_T0000114;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03009_ch_T0000114:6;Name=LINC02968;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1569589	1569889	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=HG03009_ch_T0000114;gene_id=HG03009_ch_G0000024;Parent=HG03009_ch_T0000114;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03009_ch_T0000114:7;Name=LINC02968;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	1546273	1569889	1000	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=HG03009_ch_T0000115;gene_id=HG03009_ch_G0000024;Parent=HG03009_ch_G0000024;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=HG03009_ch_T0000115;Name=LINC02968
HG03009_chrY	CAT	exon	1546273	1546440	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=HG03009_ch_T0000115;gene_id=HG03009_ch_G0000024;Parent=HG03009_ch_T0000115;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03009_ch_T0000115:0;Name=LINC02968;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1546441	1547667	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=HG03009_ch_T0000115;gene_id=HG03009_ch_G0000024;Parent=HG03009_ch_T0000115;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03009_ch_T0000115:0;Name=LINC02968;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1547668	1547914	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=HG03009_ch_T0000115;gene_id=HG03009_ch_G0000024;Parent=HG03009_ch_T0000115;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03009_ch_T0000115:1;Name=LINC02968;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1547915	1555834	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=HG03009_ch_T0000115;gene_id=HG03009_ch_G0000024;Parent=HG03009_ch_T0000115;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03009_ch_T0000115:1;Name=LINC02968;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1555835	1555930	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=HG03009_ch_T0000115;gene_id=HG03009_ch_G0000024;Parent=HG03009_ch_T0000115;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03009_ch_T0000115:2;Name=LINC02968;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1555931	1557380	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=HG03009_ch_T0000115;gene_id=HG03009_ch_G0000024;Parent=HG03009_ch_T0000115;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03009_ch_T0000115:2;Name=LINC02968;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1557381	1557597	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=HG03009_ch_T0000115;gene_id=HG03009_ch_G0000024;Parent=HG03009_ch_T0000115;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03009_ch_T0000115:3;Name=LINC02968;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1557598	1557690	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=HG03009_ch_T0000115;gene_id=HG03009_ch_G0000024;Parent=HG03009_ch_T0000115;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03009_ch_T0000115:3;Name=LINC02968;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1557691	1558476	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=HG03009_ch_T0000115;gene_id=HG03009_ch_G0000024;Parent=HG03009_ch_T0000115;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03009_ch_T0000115:4;Name=LINC02968;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1558477	1561193	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=HG03009_ch_T0000115;gene_id=HG03009_ch_G0000024;Parent=HG03009_ch_T0000115;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03009_ch_T0000115:4;Name=LINC02968;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1561194	1561446	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=HG03009_ch_T0000115;gene_id=HG03009_ch_G0000024;Parent=HG03009_ch_T0000115;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03009_ch_T0000115:5;Name=LINC02968;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1561447	1565189	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=HG03009_ch_T0000115;gene_id=HG03009_ch_G0000024;Parent=HG03009_ch_T0000115;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03009_ch_T0000115:5;Name=LINC02968;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1565190	1565249	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=HG03009_ch_T0000115;gene_id=HG03009_ch_G0000024;Parent=HG03009_ch_T0000115;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03009_ch_T0000115:6;Name=LINC02968;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1565250	1569588	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=HG03009_ch_T0000115;gene_id=HG03009_ch_G0000024;Parent=HG03009_ch_T0000115;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03009_ch_T0000115:6;Name=LINC02968;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1569589	1569889	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=HG03009_ch_T0000115;gene_id=HG03009_ch_G0000024;Parent=HG03009_ch_T0000115;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03009_ch_T0000115:7;Name=LINC02968;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	1546273	1569889	1000	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=HG03009_ch_T0000116;gene_id=HG03009_ch_G0000024;Parent=HG03009_ch_G0000024;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=HG03009_ch_T0000116;Name=LINC02968
HG03009_chrY	CAT	exon	1546273	1546440	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=HG03009_ch_T0000116;gene_id=HG03009_ch_G0000024;Parent=HG03009_ch_T0000116;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03009_ch_T0000116:0;Name=LINC02968;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1546441	1547670	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=HG03009_ch_T0000116;gene_id=HG03009_ch_G0000024;Parent=HG03009_ch_T0000116;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03009_ch_T0000116:0;Name=LINC02968;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1547671	1547914	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=HG03009_ch_T0000116;gene_id=HG03009_ch_G0000024;Parent=HG03009_ch_T0000116;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03009_ch_T0000116:1;Name=LINC02968;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1547915	1555834	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=HG03009_ch_T0000116;gene_id=HG03009_ch_G0000024;Parent=HG03009_ch_T0000116;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03009_ch_T0000116:1;Name=LINC02968;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1555835	1555930	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=HG03009_ch_T0000116;gene_id=HG03009_ch_G0000024;Parent=HG03009_ch_T0000116;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03009_ch_T0000116:2;Name=LINC02968;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1555931	1557383	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=HG03009_ch_T0000116;gene_id=HG03009_ch_G0000024;Parent=HG03009_ch_T0000116;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03009_ch_T0000116:2;Name=LINC02968;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1557384	1557597	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=HG03009_ch_T0000116;gene_id=HG03009_ch_G0000024;Parent=HG03009_ch_T0000116;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03009_ch_T0000116:3;Name=LINC02968;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1557598	1557690	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=HG03009_ch_T0000116;gene_id=HG03009_ch_G0000024;Parent=HG03009_ch_T0000116;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03009_ch_T0000116:3;Name=LINC02968;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1557691	1558476	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=HG03009_ch_T0000116;gene_id=HG03009_ch_G0000024;Parent=HG03009_ch_T0000116;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03009_ch_T0000116:4;Name=LINC02968;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1558477	1561193	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=HG03009_ch_T0000116;gene_id=HG03009_ch_G0000024;Parent=HG03009_ch_T0000116;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03009_ch_T0000116:4;Name=LINC02968;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1561194	1561446	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=HG03009_ch_T0000116;gene_id=HG03009_ch_G0000024;Parent=HG03009_ch_T0000116;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03009_ch_T0000116:5;Name=LINC02968;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1561447	1565189	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=HG03009_ch_T0000116;gene_id=HG03009_ch_G0000024;Parent=HG03009_ch_T0000116;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03009_ch_T0000116:5;Name=LINC02968;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1565190	1565249	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=HG03009_ch_T0000116;gene_id=HG03009_ch_G0000024;Parent=HG03009_ch_T0000116;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03009_ch_T0000116:6;Name=LINC02968;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1565250	1569588	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=HG03009_ch_T0000116;gene_id=HG03009_ch_G0000024;Parent=HG03009_ch_T0000116;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03009_ch_T0000116:6;Name=LINC02968;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1569589	1569889	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=HG03009_ch_T0000116;gene_id=HG03009_ch_G0000024;Parent=HG03009_ch_T0000116;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03009_ch_T0000116:7;Name=LINC02968;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	1546273	1569889	1000	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=HG03009_ch_T0000117;gene_id=HG03009_ch_G0000024;Parent=HG03009_ch_G0000024;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=HG03009_ch_T0000117;Name=LINC02968
HG03009_chrY	CAT	exon	1546273	1546440	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=HG03009_ch_T0000117;gene_id=HG03009_ch_G0000024;Parent=HG03009_ch_T0000117;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03009_ch_T0000117:0;Name=LINC02968;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1546441	1547667	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=HG03009_ch_T0000117;gene_id=HG03009_ch_G0000024;Parent=HG03009_ch_T0000117;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03009_ch_T0000117:0;Name=LINC02968;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1547668	1547914	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=HG03009_ch_T0000117;gene_id=HG03009_ch_G0000024;Parent=HG03009_ch_T0000117;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03009_ch_T0000117:1;Name=LINC02968;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1547915	1555834	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=HG03009_ch_T0000117;gene_id=HG03009_ch_G0000024;Parent=HG03009_ch_T0000117;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03009_ch_T0000117:1;Name=LINC02968;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1555835	1555930	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=HG03009_ch_T0000117;gene_id=HG03009_ch_G0000024;Parent=HG03009_ch_T0000117;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03009_ch_T0000117:2;Name=LINC02968;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1555931	1557491	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=HG03009_ch_T0000117;gene_id=HG03009_ch_G0000024;Parent=HG03009_ch_T0000117;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03009_ch_T0000117:2;Name=LINC02968;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1557492	1557597	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=HG03009_ch_T0000117;gene_id=HG03009_ch_G0000024;Parent=HG03009_ch_T0000117;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03009_ch_T0000117:3;Name=LINC02968;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1557598	1557690	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=HG03009_ch_T0000117;gene_id=HG03009_ch_G0000024;Parent=HG03009_ch_T0000117;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03009_ch_T0000117:3;Name=LINC02968;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1557691	1558476	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=HG03009_ch_T0000117;gene_id=HG03009_ch_G0000024;Parent=HG03009_ch_T0000117;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03009_ch_T0000117:4;Name=LINC02968;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1558477	1561193	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=HG03009_ch_T0000117;gene_id=HG03009_ch_G0000024;Parent=HG03009_ch_T0000117;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03009_ch_T0000117:4;Name=LINC02968;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1561194	1561446	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=HG03009_ch_T0000117;gene_id=HG03009_ch_G0000024;Parent=HG03009_ch_T0000117;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03009_ch_T0000117:5;Name=LINC02968;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1561447	1565189	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=HG03009_ch_T0000117;gene_id=HG03009_ch_G0000024;Parent=HG03009_ch_T0000117;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03009_ch_T0000117:5;Name=LINC02968;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1565190	1565249	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=HG03009_ch_T0000117;gene_id=HG03009_ch_G0000024;Parent=HG03009_ch_T0000117;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03009_ch_T0000117:6;Name=LINC02968;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1565250	1569588	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=HG03009_ch_T0000117;gene_id=HG03009_ch_G0000024;Parent=HG03009_ch_T0000117;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03009_ch_T0000117:6;Name=LINC02968;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1569589	1569889	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=HG03009_ch_T0000117;gene_id=HG03009_ch_G0000024;Parent=HG03009_ch_T0000117;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03009_ch_T0000117:7;Name=LINC02968;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	1583995	1597287	.	+	.	source_gene_common_name=LOC105379413;source_gene=hg002_chrY_paternal_31;alternative_source_transcripts=hg002_chrY_paternal_31.1,hg002_chrY_paternal_31.1;gene_id=HG03009_ch_G0000025;gene_biotype=lncRNA;gene_name=LOC105379413;gene_sources=liftoff;ID=HG03009_ch_G0000025;Name=LOC105379413
HG03009_chrY	CAT	transcript	1583995	1597287	1000	+	.	source_transcript=hg002_chrY_paternal_31.1;source_transcript_name=hg002_chrY_paternal_31.1;source_gene=hg002_chrY_paternal_31;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_31;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_31.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_31.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379413;alternative_source_transcripts=hg002_chrY_paternal_31.1,hg002_chrY_paternal_31.1;transcript_id=HG03009_ch_T0000118;gene_id=HG03009_ch_G0000025;Parent=HG03009_ch_G0000025;transcript_name=hg002_chrY_paternal_31.1;gene_name=LOC105379413;ID=HG03009_ch_T0000118;Name=LOC105379413
HG03009_chrY	CAT	exon	1583995	1584571	.	+	.	source_transcript=hg002_chrY_paternal_31.1;source_transcript_name=hg002_chrY_paternal_31.1;source_gene=hg002_chrY_paternal_31;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_31;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_31.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_31.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379413;alternative_source_transcripts=hg002_chrY_paternal_31.1,hg002_chrY_paternal_31.1;transcript_id=HG03009_ch_T0000118;gene_id=HG03009_ch_G0000025;Parent=HG03009_ch_T0000118;transcript_name=hg002_chrY_paternal_31.1;gene_name=LOC105379413;ID=exon:HG03009_ch_T0000118:0;Name=LOC105379413;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1584572	1589014	.	+	.	source_transcript=hg002_chrY_paternal_31.1;source_transcript_name=hg002_chrY_paternal_31.1;source_gene=hg002_chrY_paternal_31;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_31;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_31.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_31.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379413;alternative_source_transcripts=hg002_chrY_paternal_31.1,hg002_chrY_paternal_31.1;transcript_id=HG03009_ch_T0000118;gene_id=HG03009_ch_G0000025;Parent=HG03009_ch_T0000118;transcript_name=hg002_chrY_paternal_31.1;gene_name=LOC105379413;ID=intron:HG03009_ch_T0000118:0;Name=LOC105379413;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1589015	1589228	.	+	.	source_transcript=hg002_chrY_paternal_31.1;source_transcript_name=hg002_chrY_paternal_31.1;source_gene=hg002_chrY_paternal_31;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_31;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_31.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_31.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379413;alternative_source_transcripts=hg002_chrY_paternal_31.1,hg002_chrY_paternal_31.1;transcript_id=HG03009_ch_T0000118;gene_id=HG03009_ch_G0000025;Parent=HG03009_ch_T0000118;transcript_name=hg002_chrY_paternal_31.1;gene_name=LOC105379413;ID=exon:HG03009_ch_T0000118:1;Name=LOC105379413;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1589229	1594159	.	+	.	source_transcript=hg002_chrY_paternal_31.1;source_transcript_name=hg002_chrY_paternal_31.1;source_gene=hg002_chrY_paternal_31;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_31;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_31.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_31.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379413;alternative_source_transcripts=hg002_chrY_paternal_31.1,hg002_chrY_paternal_31.1;transcript_id=HG03009_ch_T0000118;gene_id=HG03009_ch_G0000025;Parent=HG03009_ch_T0000118;transcript_name=hg002_chrY_paternal_31.1;gene_name=LOC105379413;ID=intron:HG03009_ch_T0000118:1;Name=LOC105379413;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1594160	1597287	.	+	.	source_transcript=hg002_chrY_paternal_31.1;source_transcript_name=hg002_chrY_paternal_31.1;source_gene=hg002_chrY_paternal_31;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_31;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_31.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_31.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379413;alternative_source_transcripts=hg002_chrY_paternal_31.1,hg002_chrY_paternal_31.1;transcript_id=HG03009_ch_T0000118;gene_id=HG03009_ch_G0000025;Parent=HG03009_ch_T0000118;transcript_name=hg002_chrY_paternal_31.1;gene_name=LOC105379413;ID=exon:HG03009_ch_T0000118:2;Name=LOC105379413;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	1583995	1597287	1000	+	.	source_transcript=hg002_chrY_paternal_31.2;source_transcript_name=hg002_chrY_paternal_31.1;source_gene=hg002_chrY_paternal_31;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_31;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_31.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_31.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379413;alternative_source_transcripts=hg002_chrY_paternal_31.2,hg002_chrY_paternal_31.2;transcript_id=HG03009_ch_T0000119;gene_id=HG03009_ch_G0000025;Parent=HG03009_ch_G0000025;transcript_name=hg002_chrY_paternal_31.1;gene_name=LOC105379413;ID=HG03009_ch_T0000119;Name=LOC105379413
HG03009_chrY	CAT	exon	1583995	1584571	.	+	.	source_transcript=hg002_chrY_paternal_31.2;source_transcript_name=hg002_chrY_paternal_31.1;source_gene=hg002_chrY_paternal_31;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_31;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_31.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_31.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379413;alternative_source_transcripts=hg002_chrY_paternal_31.2,hg002_chrY_paternal_31.2;transcript_id=HG03009_ch_T0000119;gene_id=HG03009_ch_G0000025;Parent=HG03009_ch_T0000119;transcript_name=hg002_chrY_paternal_31.1;gene_name=LOC105379413;ID=exon:HG03009_ch_T0000119:0;Name=LOC105379413;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1584572	1589014	.	+	.	source_transcript=hg002_chrY_paternal_31.2;source_transcript_name=hg002_chrY_paternal_31.1;source_gene=hg002_chrY_paternal_31;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_31;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_31.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_31.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379413;alternative_source_transcripts=hg002_chrY_paternal_31.2,hg002_chrY_paternal_31.2;transcript_id=HG03009_ch_T0000119;gene_id=HG03009_ch_G0000025;Parent=HG03009_ch_T0000119;transcript_name=hg002_chrY_paternal_31.1;gene_name=LOC105379413;ID=intron:HG03009_ch_T0000119:0;Name=LOC105379413;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1589015	1589177	.	+	.	source_transcript=hg002_chrY_paternal_31.2;source_transcript_name=hg002_chrY_paternal_31.1;source_gene=hg002_chrY_paternal_31;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_31;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_31.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_31.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379413;alternative_source_transcripts=hg002_chrY_paternal_31.2,hg002_chrY_paternal_31.2;transcript_id=HG03009_ch_T0000119;gene_id=HG03009_ch_G0000025;Parent=HG03009_ch_T0000119;transcript_name=hg002_chrY_paternal_31.1;gene_name=LOC105379413;ID=exon:HG03009_ch_T0000119:1;Name=LOC105379413;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1589178	1594159	.	+	.	source_transcript=hg002_chrY_paternal_31.2;source_transcript_name=hg002_chrY_paternal_31.1;source_gene=hg002_chrY_paternal_31;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_31;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_31.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_31.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379413;alternative_source_transcripts=hg002_chrY_paternal_31.2,hg002_chrY_paternal_31.2;transcript_id=HG03009_ch_T0000119;gene_id=HG03009_ch_G0000025;Parent=HG03009_ch_T0000119;transcript_name=hg002_chrY_paternal_31.1;gene_name=LOC105379413;ID=intron:HG03009_ch_T0000119:1;Name=LOC105379413;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1594160	1597287	.	+	.	source_transcript=hg002_chrY_paternal_31.2;source_transcript_name=hg002_chrY_paternal_31.1;source_gene=hg002_chrY_paternal_31;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_31;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_31.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_31.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379413;alternative_source_transcripts=hg002_chrY_paternal_31.2,hg002_chrY_paternal_31.2;transcript_id=HG03009_ch_T0000119;gene_id=HG03009_ch_G0000025;Parent=HG03009_ch_T0000119;transcript_name=hg002_chrY_paternal_31.1;gene_name=LOC105379413;ID=exon:HG03009_ch_T0000119:2;Name=LOC105379413;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	1687806	1694114	.	-	.	source_gene_common_name=LOC107985677;source_gene=hg002_chrY_paternal_32;alternative_source_transcripts=hg002_chrY_paternal_32.1,hg002_chrY_paternal_32.1;gene_id=HG03009_ch_G0000026;gene_biotype=lncRNA;gene_name=LOC107985677;gene_sources=liftoff;ID=HG03009_ch_G0000026;Name=LOC107985677
HG03009_chrY	CAT	transcript	1687806	1694114	1000	-	.	source_transcript=hg002_chrY_paternal_32.1;source_transcript_name=hg002_chrY_paternal_32.1;source_gene=hg002_chrY_paternal_32;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_32;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_32.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_32.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107985677;alternative_source_transcripts=hg002_chrY_paternal_32.1,hg002_chrY_paternal_32.1;transcript_id=HG03009_ch_T0000120;gene_id=HG03009_ch_G0000026;Parent=HG03009_ch_G0000026;transcript_name=hg002_chrY_paternal_32.1;gene_name=LOC107985677;ID=HG03009_ch_T0000120;Name=LOC107985677
HG03009_chrY	CAT	exon	1687806	1688864	.	-	.	source_transcript=hg002_chrY_paternal_32.1;source_transcript_name=hg002_chrY_paternal_32.1;source_gene=hg002_chrY_paternal_32;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_32;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_32.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_32.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107985677;alternative_source_transcripts=hg002_chrY_paternal_32.1,hg002_chrY_paternal_32.1;transcript_id=HG03009_ch_T0000120;gene_id=HG03009_ch_G0000026;Parent=HG03009_ch_T0000120;transcript_name=hg002_chrY_paternal_32.1;gene_name=LOC107985677;ID=exon:HG03009_ch_T0000120:0;Name=LOC107985677;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1688865	1690022	.	-	.	source_transcript=hg002_chrY_paternal_32.1;source_transcript_name=hg002_chrY_paternal_32.1;source_gene=hg002_chrY_paternal_32;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_32;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_32.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_32.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107985677;alternative_source_transcripts=hg002_chrY_paternal_32.1,hg002_chrY_paternal_32.1;transcript_id=HG03009_ch_T0000120;gene_id=HG03009_ch_G0000026;Parent=HG03009_ch_T0000120;transcript_name=hg002_chrY_paternal_32.1;gene_name=LOC107985677;ID=intron:HG03009_ch_T0000120:0;Name=LOC107985677;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1690023	1690136	.	-	.	source_transcript=hg002_chrY_paternal_32.1;source_transcript_name=hg002_chrY_paternal_32.1;source_gene=hg002_chrY_paternal_32;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_32;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_32.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_32.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107985677;alternative_source_transcripts=hg002_chrY_paternal_32.1,hg002_chrY_paternal_32.1;transcript_id=HG03009_ch_T0000120;gene_id=HG03009_ch_G0000026;Parent=HG03009_ch_T0000120;transcript_name=hg002_chrY_paternal_32.1;gene_name=LOC107985677;ID=exon:HG03009_ch_T0000120:1;Name=LOC107985677;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1690137	1690625	.	-	.	source_transcript=hg002_chrY_paternal_32.1;source_transcript_name=hg002_chrY_paternal_32.1;source_gene=hg002_chrY_paternal_32;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_32;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_32.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_32.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107985677;alternative_source_transcripts=hg002_chrY_paternal_32.1,hg002_chrY_paternal_32.1;transcript_id=HG03009_ch_T0000120;gene_id=HG03009_ch_G0000026;Parent=HG03009_ch_T0000120;transcript_name=hg002_chrY_paternal_32.1;gene_name=LOC107985677;ID=intron:HG03009_ch_T0000120:1;Name=LOC107985677;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1690626	1690752	.	-	.	source_transcript=hg002_chrY_paternal_32.1;source_transcript_name=hg002_chrY_paternal_32.1;source_gene=hg002_chrY_paternal_32;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_32;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_32.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_32.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107985677;alternative_source_transcripts=hg002_chrY_paternal_32.1,hg002_chrY_paternal_32.1;transcript_id=HG03009_ch_T0000120;gene_id=HG03009_ch_G0000026;Parent=HG03009_ch_T0000120;transcript_name=hg002_chrY_paternal_32.1;gene_name=LOC107985677;ID=exon:HG03009_ch_T0000120:2;Name=LOC107985677;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1690753	1692083	.	-	.	source_transcript=hg002_chrY_paternal_32.1;source_transcript_name=hg002_chrY_paternal_32.1;source_gene=hg002_chrY_paternal_32;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_32;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_32.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_32.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107985677;alternative_source_transcripts=hg002_chrY_paternal_32.1,hg002_chrY_paternal_32.1;transcript_id=HG03009_ch_T0000120;gene_id=HG03009_ch_G0000026;Parent=HG03009_ch_T0000120;transcript_name=hg002_chrY_paternal_32.1;gene_name=LOC107985677;ID=intron:HG03009_ch_T0000120:2;Name=LOC107985677;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1692084	1692399	.	-	.	source_transcript=hg002_chrY_paternal_32.1;source_transcript_name=hg002_chrY_paternal_32.1;source_gene=hg002_chrY_paternal_32;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_32;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_32.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_32.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107985677;alternative_source_transcripts=hg002_chrY_paternal_32.1,hg002_chrY_paternal_32.1;transcript_id=HG03009_ch_T0000120;gene_id=HG03009_ch_G0000026;Parent=HG03009_ch_T0000120;transcript_name=hg002_chrY_paternal_32.1;gene_name=LOC107985677;ID=exon:HG03009_ch_T0000120:3;Name=LOC107985677;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1692400	1692799	.	-	.	source_transcript=hg002_chrY_paternal_32.1;source_transcript_name=hg002_chrY_paternal_32.1;source_gene=hg002_chrY_paternal_32;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_32;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_32.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_32.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107985677;alternative_source_transcripts=hg002_chrY_paternal_32.1,hg002_chrY_paternal_32.1;transcript_id=HG03009_ch_T0000120;gene_id=HG03009_ch_G0000026;Parent=HG03009_ch_T0000120;transcript_name=hg002_chrY_paternal_32.1;gene_name=LOC107985677;ID=intron:HG03009_ch_T0000120:3;Name=LOC107985677;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1692800	1693399	.	-	.	source_transcript=hg002_chrY_paternal_32.1;source_transcript_name=hg002_chrY_paternal_32.1;source_gene=hg002_chrY_paternal_32;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_32;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_32.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_32.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107985677;alternative_source_transcripts=hg002_chrY_paternal_32.1,hg002_chrY_paternal_32.1;transcript_id=HG03009_ch_T0000120;gene_id=HG03009_ch_G0000026;Parent=HG03009_ch_T0000120;transcript_name=hg002_chrY_paternal_32.1;gene_name=LOC107985677;ID=exon:HG03009_ch_T0000120:4;Name=LOC107985677;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1693400	1693775	.	-	.	source_transcript=hg002_chrY_paternal_32.1;source_transcript_name=hg002_chrY_paternal_32.1;source_gene=hg002_chrY_paternal_32;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_32;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_32.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_32.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107985677;alternative_source_transcripts=hg002_chrY_paternal_32.1,hg002_chrY_paternal_32.1;transcript_id=HG03009_ch_T0000120;gene_id=HG03009_ch_G0000026;Parent=HG03009_ch_T0000120;transcript_name=hg002_chrY_paternal_32.1;gene_name=LOC107985677;ID=intron:HG03009_ch_T0000120:4;Name=LOC107985677;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1693776	1694114	.	-	.	source_transcript=hg002_chrY_paternal_32.1;source_transcript_name=hg002_chrY_paternal_32.1;source_gene=hg002_chrY_paternal_32;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_32;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_32.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_32.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107985677;alternative_source_transcripts=hg002_chrY_paternal_32.1,hg002_chrY_paternal_32.1;transcript_id=HG03009_ch_T0000120;gene_id=HG03009_ch_G0000026;Parent=HG03009_ch_T0000120;transcript_name=hg002_chrY_paternal_32.1;gene_name=LOC107985677;ID=exon:HG03009_ch_T0000120:5;Name=LOC107985677;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	1844053	2126141	.	-	.	source_gene_common_name=DHRSX;source_gene=hg002_chrY_paternal_33;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;gene_id=HG03009_ch_G0000027;gene_biotype=protein_coding;gene_name=DHRSX;gene_sources=liftoff,augTM;ID=HG03009_ch_G0000027;Name=DHRSX
HG03009_chrY	CAT	transcript	1844053	2126141	100	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000121;gene_id=HG03009_ch_G0000027;Parent=HG03009_ch_G0000027;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=HG03009_ch_T0000121;Name=DHRSX
HG03009_chrY	CAT	exon	1844053	1845776	.	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000121;gene_id=HG03009_ch_G0000027;Parent=HG03009_ch_T0000121;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=exon:HG03009_ch_T0000121:0;Name=DHRSX;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1845588	1845776	.	-	0	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000121;gene_id=HG03009_ch_G0000027;Parent=HG03009_ch_T0000121;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=CDS:HG03009_ch_T0000121:0;Name=DHRSX;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	1845588	1845590	.	-	0	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000121;gene_id=HG03009_ch_G0000027;Parent=HG03009_ch_T0000121;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=stop_codon:HG03009_ch_T0000121;Name=DHRSX;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1845777	1867358	.	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000121;gene_id=HG03009_ch_G0000027;Parent=HG03009_ch_T0000121;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=intron:HG03009_ch_T0000121:0;Name=DHRSX;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1867359	1867566	.	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000121;gene_id=HG03009_ch_G0000027;Parent=HG03009_ch_T0000121;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=exon:HG03009_ch_T0000121:1;Name=DHRSX;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1867359	1867566	.	-	1	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000121;gene_id=HG03009_ch_G0000027;Parent=HG03009_ch_T0000121;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=CDS:HG03009_ch_T0000121:1;Name=DHRSX;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1867567	1891085	.	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000121;gene_id=HG03009_ch_G0000027;Parent=HG03009_ch_T0000121;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=intron:HG03009_ch_T0000121:1;Name=DHRSX;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1891086	1891293	.	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000121;gene_id=HG03009_ch_G0000027;Parent=HG03009_ch_T0000121;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=exon:HG03009_ch_T0000121:2;Name=DHRSX;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1891086	1891293	.	-	2	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000121;gene_id=HG03009_ch_G0000027;Parent=HG03009_ch_T0000121;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=CDS:HG03009_ch_T0000121:2;Name=DHRSX;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1891294	1911526	.	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000121;gene_id=HG03009_ch_G0000027;Parent=HG03009_ch_T0000121;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=intron:HG03009_ch_T0000121:2;Name=DHRSX;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1911527	1911628	.	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000121;gene_id=HG03009_ch_G0000027;Parent=HG03009_ch_T0000121;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=exon:HG03009_ch_T0000121:3;Name=DHRSX;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	1911527	1911628	.	-	2	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000121;gene_id=HG03009_ch_G0000027;Parent=HG03009_ch_T0000121;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=CDS:HG03009_ch_T0000121:3;Name=DHRSX;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1911629	2033893	.	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000121;gene_id=HG03009_ch_G0000027;Parent=HG03009_ch_T0000121;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=intron:HG03009_ch_T0000121:3;Name=DHRSX;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2033894	2033962	.	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000121;gene_id=HG03009_ch_G0000027;Parent=HG03009_ch_T0000121;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=exon:HG03009_ch_T0000121:4;Name=DHRSX;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2033894	2033962	.	-	2	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000121;gene_id=HG03009_ch_G0000027;Parent=HG03009_ch_T0000121;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=CDS:HG03009_ch_T0000121:4;Name=DHRSX;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2033963	2050348	.	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000121;gene_id=HG03009_ch_G0000027;Parent=HG03009_ch_T0000121;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=intron:HG03009_ch_T0000121:4;Name=DHRSX;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2050349	2050456	.	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000121;gene_id=HG03009_ch_G0000027;Parent=HG03009_ch_T0000121;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=exon:HG03009_ch_T0000121:5;Name=DHRSX;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2050349	2050456	.	-	2	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000121;gene_id=HG03009_ch_G0000027;Parent=HG03009_ch_T0000121;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=CDS:HG03009_ch_T0000121:5;Name=DHRSX;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2050457	2125981	.	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000121;gene_id=HG03009_ch_G0000027;Parent=HG03009_ch_T0000121;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=intron:HG03009_ch_T0000121:5;Name=DHRSX;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2125982	2126141	.	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000121;gene_id=HG03009_ch_G0000027;Parent=HG03009_ch_T0000121;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=exon:HG03009_ch_T0000121:6;Name=DHRSX;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2125982	2126090	.	-	0	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000121;gene_id=HG03009_ch_G0000027;Parent=HG03009_ch_T0000121;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=CDS:HG03009_ch_T0000121:6;Name=DHRSX;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	2126088	2126090	.	-	0	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000121;gene_id=HG03009_ch_G0000027;Parent=HG03009_ch_T0000121;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=start_codon:HG03009_ch_T0000121;Name=DHRSX;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	1945809	1962857	.	+	.	source_gene_common_name=LOC124905239;source_gene=hg002_chrY_paternal_34;alternative_source_transcripts=hg002_chrY_paternal_34.1,hg002_chrY_paternal_34.1;gene_id=HG03009_ch_G0000028;gene_biotype=lncRNA;gene_name=LOC124905239;gene_sources=liftoff;ID=HG03009_ch_G0000028;Name=LOC124905239
HG03009_chrY	CAT	transcript	1945809	1962857	1000	+	.	source_transcript=hg002_chrY_paternal_34.1;source_transcript_name=hg002_chrY_paternal_34.1;source_gene=hg002_chrY_paternal_34;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_34;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_34.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_34.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905239;alternative_source_transcripts=hg002_chrY_paternal_34.1,hg002_chrY_paternal_34.1;transcript_id=HG03009_ch_T0000122;gene_id=HG03009_ch_G0000028;Parent=HG03009_ch_G0000028;transcript_name=hg002_chrY_paternal_34.1;gene_name=LOC124905239;ID=HG03009_ch_T0000122;Name=LOC124905239
HG03009_chrY	CAT	exon	1945809	1947086	.	+	.	source_transcript=hg002_chrY_paternal_34.1;source_transcript_name=hg002_chrY_paternal_34.1;source_gene=hg002_chrY_paternal_34;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_34;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_34.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_34.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905239;alternative_source_transcripts=hg002_chrY_paternal_34.1,hg002_chrY_paternal_34.1;transcript_id=HG03009_ch_T0000122;gene_id=HG03009_ch_G0000028;Parent=HG03009_ch_T0000122;transcript_name=hg002_chrY_paternal_34.1;gene_name=LOC124905239;ID=exon:HG03009_ch_T0000122:0;Name=LOC124905239;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1947087	1954588	.	+	.	source_transcript=hg002_chrY_paternal_34.1;source_transcript_name=hg002_chrY_paternal_34.1;source_gene=hg002_chrY_paternal_34;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_34;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_34.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_34.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905239;alternative_source_transcripts=hg002_chrY_paternal_34.1,hg002_chrY_paternal_34.1;transcript_id=HG03009_ch_T0000122;gene_id=HG03009_ch_G0000028;Parent=HG03009_ch_T0000122;transcript_name=hg002_chrY_paternal_34.1;gene_name=LOC124905239;ID=intron:HG03009_ch_T0000122:0;Name=LOC124905239;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1954589	1954715	.	+	.	source_transcript=hg002_chrY_paternal_34.1;source_transcript_name=hg002_chrY_paternal_34.1;source_gene=hg002_chrY_paternal_34;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_34;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_34.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_34.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905239;alternative_source_transcripts=hg002_chrY_paternal_34.1,hg002_chrY_paternal_34.1;transcript_id=HG03009_ch_T0000122;gene_id=HG03009_ch_G0000028;Parent=HG03009_ch_T0000122;transcript_name=hg002_chrY_paternal_34.1;gene_name=LOC124905239;ID=exon:HG03009_ch_T0000122:1;Name=LOC124905239;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	1954716	1962690	.	+	.	source_transcript=hg002_chrY_paternal_34.1;source_transcript_name=hg002_chrY_paternal_34.1;source_gene=hg002_chrY_paternal_34;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_34;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_34.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_34.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905239;alternative_source_transcripts=hg002_chrY_paternal_34.1,hg002_chrY_paternal_34.1;transcript_id=HG03009_ch_T0000122;gene_id=HG03009_ch_G0000028;Parent=HG03009_ch_T0000122;transcript_name=hg002_chrY_paternal_34.1;gene_name=LOC124905239;ID=intron:HG03009_ch_T0000122:1;Name=LOC124905239;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	1962691	1962857	.	+	.	source_transcript=hg002_chrY_paternal_34.1;source_transcript_name=hg002_chrY_paternal_34.1;source_gene=hg002_chrY_paternal_34;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_34;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_34.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_34.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905239;alternative_source_transcripts=hg002_chrY_paternal_34.1,hg002_chrY_paternal_34.1;transcript_id=HG03009_ch_T0000122;gene_id=HG03009_ch_G0000028;Parent=HG03009_ch_T0000122;transcript_name=hg002_chrY_paternal_34.1;gene_name=LOC124905239;ID=exon:HG03009_ch_T0000122:2;Name=LOC124905239;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	2111596	2126141	.	-	.	source_gene_common_name=ZBED1;source_gene=hg002_chrY_paternal_35;alternative_source_transcripts=hg002_chrY_paternal_35.1,hg002_chrY_paternal_35.1;gene_id=HG03009_ch_G0000029;gene_biotype=protein_coding;gene_name=ZBED1;gene_sources=liftoff,augTM;ID=HG03009_ch_G0000029;Name=ZBED1
HG03009_chrY	CAT	transcript	2111596	2125790	100	-	.	source_transcript=hg002_chrY_paternal_35.1;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.1,hg002_chrY_paternal_35.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000123;gene_id=HG03009_ch_G0000029;Parent=HG03009_ch_G0000029;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=HG03009_ch_T0000123;Name=ZBED1
HG03009_chrY	CAT	exon	2111596	2115933	.	-	.	source_transcript=hg002_chrY_paternal_35.1;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.1,hg002_chrY_paternal_35.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000123;gene_id=HG03009_ch_G0000029;Parent=HG03009_ch_T0000123;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=exon:HG03009_ch_T0000123:0;Name=ZBED1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2113796	2115880	.	-	0	source_transcript=hg002_chrY_paternal_35.1;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.1,hg002_chrY_paternal_35.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000123;gene_id=HG03009_ch_G0000029;Parent=HG03009_ch_T0000123;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=CDS:HG03009_ch_T0000123:0;Name=ZBED1;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	2113796	2113798	.	-	0	source_transcript=hg002_chrY_paternal_35.1;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.1,hg002_chrY_paternal_35.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000123;gene_id=HG03009_ch_G0000029;Parent=HG03009_ch_T0000123;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=stop_codon:HG03009_ch_T0000123;Name=ZBED1;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	2115878	2115880	.	-	0	source_transcript=hg002_chrY_paternal_35.1;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.1,hg002_chrY_paternal_35.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000123;gene_id=HG03009_ch_G0000029;Parent=HG03009_ch_T0000123;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=start_codon:HG03009_ch_T0000123;Name=ZBED1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2115934	2125475	.	-	.	source_transcript=hg002_chrY_paternal_35.1;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.1,hg002_chrY_paternal_35.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000123;gene_id=HG03009_ch_G0000029;Parent=HG03009_ch_T0000123;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=intron:HG03009_ch_T0000123:0;Name=ZBED1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2125476	2125790	.	-	.	source_transcript=hg002_chrY_paternal_35.1;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.1,hg002_chrY_paternal_35.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000123;gene_id=HG03009_ch_G0000029;Parent=HG03009_ch_T0000123;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=exon:HG03009_ch_T0000123:1;Name=ZBED1;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	2111596	2126141	100	-	.	source_transcript=hg002_chrY_paternal_35.2;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.2,hg002_chrY_paternal_35.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000124;gene_id=HG03009_ch_G0000029;Parent=HG03009_ch_G0000029;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=HG03009_ch_T0000124;Name=ZBED1
HG03009_chrY	CAT	exon	2111596	2115933	.	-	.	source_transcript=hg002_chrY_paternal_35.2;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.2,hg002_chrY_paternal_35.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000124;gene_id=HG03009_ch_G0000029;Parent=HG03009_ch_T0000124;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=exon:HG03009_ch_T0000124:0;Name=ZBED1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2113796	2115880	.	-	0	source_transcript=hg002_chrY_paternal_35.2;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.2,hg002_chrY_paternal_35.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000124;gene_id=HG03009_ch_G0000029;Parent=HG03009_ch_T0000124;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=CDS:HG03009_ch_T0000124:0;Name=ZBED1;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	2113796	2113798	.	-	0	source_transcript=hg002_chrY_paternal_35.2;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.2,hg002_chrY_paternal_35.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000124;gene_id=HG03009_ch_G0000029;Parent=HG03009_ch_T0000124;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=stop_codon:HG03009_ch_T0000124;Name=ZBED1;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	2115878	2115880	.	-	0	source_transcript=hg002_chrY_paternal_35.2;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.2,hg002_chrY_paternal_35.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000124;gene_id=HG03009_ch_G0000029;Parent=HG03009_ch_T0000124;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=start_codon:HG03009_ch_T0000124;Name=ZBED1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2115934	2125981	.	-	.	source_transcript=hg002_chrY_paternal_35.2;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.2,hg002_chrY_paternal_35.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000124;gene_id=HG03009_ch_G0000029;Parent=HG03009_ch_T0000124;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=intron:HG03009_ch_T0000124:0;Name=ZBED1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2125982	2126141	.	-	.	source_transcript=hg002_chrY_paternal_35.2;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.2,hg002_chrY_paternal_35.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000124;gene_id=HG03009_ch_G0000029;Parent=HG03009_ch_T0000124;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=exon:HG03009_ch_T0000124:1;Name=ZBED1;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	2111596	2126141	100	-	.	source_transcript=hg002_chrY_paternal_35.3;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.3,hg002_chrY_paternal_35.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000125;gene_id=HG03009_ch_G0000029;Parent=HG03009_ch_G0000029;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=HG03009_ch_T0000125;Name=ZBED1
HG03009_chrY	CAT	exon	2111596	2115930	.	-	.	source_transcript=hg002_chrY_paternal_35.3;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.3,hg002_chrY_paternal_35.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000125;gene_id=HG03009_ch_G0000029;Parent=HG03009_ch_T0000125;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=exon:HG03009_ch_T0000125:0;Name=ZBED1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2113796	2115880	.	-	0	source_transcript=hg002_chrY_paternal_35.3;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.3,hg002_chrY_paternal_35.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000125;gene_id=HG03009_ch_G0000029;Parent=HG03009_ch_T0000125;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=CDS:HG03009_ch_T0000125:0;Name=ZBED1;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	2113796	2113798	.	-	0	source_transcript=hg002_chrY_paternal_35.3;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.3,hg002_chrY_paternal_35.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000125;gene_id=HG03009_ch_G0000029;Parent=HG03009_ch_T0000125;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=stop_codon:HG03009_ch_T0000125;Name=ZBED1;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	2115878	2115880	.	-	0	source_transcript=hg002_chrY_paternal_35.3;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.3,hg002_chrY_paternal_35.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000125;gene_id=HG03009_ch_G0000029;Parent=HG03009_ch_T0000125;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=start_codon:HG03009_ch_T0000125;Name=ZBED1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2115931	2125981	.	-	.	source_transcript=hg002_chrY_paternal_35.3;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.3,hg002_chrY_paternal_35.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000125;gene_id=HG03009_ch_G0000029;Parent=HG03009_ch_T0000125;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=intron:HG03009_ch_T0000125:0;Name=ZBED1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2125982	2126141	.	-	.	source_transcript=hg002_chrY_paternal_35.3;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.3,hg002_chrY_paternal_35.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000125;gene_id=HG03009_ch_G0000029;Parent=HG03009_ch_T0000125;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=exon:HG03009_ch_T0000125:1;Name=ZBED1;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	2191129	2234299	.	-	.	source_gene_common_name=LOC101928092;source_gene=hg002_chrY_paternal_36;alternative_source_transcripts=hg002_chrY_paternal_36.1,hg002_chrY_paternal_36.1;gene_id=HG03009_ch_G0000030;gene_biotype=lncRNA;gene_name=LOC101928092;gene_sources=liftoff;ID=HG03009_ch_G0000030;Name=LOC101928092
HG03009_chrY	CAT	transcript	2191129	2199698	1000	-	.	source_transcript=hg002_chrY_paternal_36.1;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.1,hg002_chrY_paternal_36.1;transcript_id=HG03009_ch_T0000126;gene_id=HG03009_ch_G0000030;Parent=HG03009_ch_G0000030;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=HG03009_ch_T0000126;Name=LOC101928092
HG03009_chrY	CAT	exon	2191129	2192392	.	-	.	source_transcript=hg002_chrY_paternal_36.1;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.1,hg002_chrY_paternal_36.1;transcript_id=HG03009_ch_T0000126;gene_id=HG03009_ch_G0000030;Parent=HG03009_ch_T0000126;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:HG03009_ch_T0000126:0;Name=LOC101928092;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2192393	2195109	.	-	.	source_transcript=hg002_chrY_paternal_36.1;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.1,hg002_chrY_paternal_36.1;transcript_id=HG03009_ch_T0000126;gene_id=HG03009_ch_G0000030;Parent=HG03009_ch_T0000126;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=intron:HG03009_ch_T0000126:0;Name=LOC101928092;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2195110	2195265	.	-	.	source_transcript=hg002_chrY_paternal_36.1;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.1,hg002_chrY_paternal_36.1;transcript_id=HG03009_ch_T0000126;gene_id=HG03009_ch_G0000030;Parent=HG03009_ch_T0000126;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:HG03009_ch_T0000126:1;Name=LOC101928092;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2195266	2199160	.	-	.	source_transcript=hg002_chrY_paternal_36.1;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.1,hg002_chrY_paternal_36.1;transcript_id=HG03009_ch_T0000126;gene_id=HG03009_ch_G0000030;Parent=HG03009_ch_T0000126;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=intron:HG03009_ch_T0000126:1;Name=LOC101928092;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2199161	2199698	.	-	.	source_transcript=hg002_chrY_paternal_36.1;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.1,hg002_chrY_paternal_36.1;transcript_id=HG03009_ch_T0000126;gene_id=HG03009_ch_G0000030;Parent=HG03009_ch_T0000126;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:HG03009_ch_T0000126:2;Name=LOC101928092;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	2191129	2199698	1000	-	.	source_transcript=hg002_chrY_paternal_36.2;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.2,hg002_chrY_paternal_36.2;transcript_id=HG03009_ch_T0000127;gene_id=HG03009_ch_G0000030;Parent=HG03009_ch_G0000030;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=HG03009_ch_T0000127;Name=LOC101928092
HG03009_chrY	CAT	exon	2191129	2192392	.	-	.	source_transcript=hg002_chrY_paternal_36.2;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.2,hg002_chrY_paternal_36.2;transcript_id=HG03009_ch_T0000127;gene_id=HG03009_ch_G0000030;Parent=HG03009_ch_T0000127;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:HG03009_ch_T0000127:0;Name=LOC101928092;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2192393	2195109	.	-	.	source_transcript=hg002_chrY_paternal_36.2;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.2,hg002_chrY_paternal_36.2;transcript_id=HG03009_ch_T0000127;gene_id=HG03009_ch_G0000030;Parent=HG03009_ch_T0000127;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=intron:HG03009_ch_T0000127:0;Name=LOC101928092;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2195110	2195265	.	-	.	source_transcript=hg002_chrY_paternal_36.2;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.2,hg002_chrY_paternal_36.2;transcript_id=HG03009_ch_T0000127;gene_id=HG03009_ch_G0000030;Parent=HG03009_ch_T0000127;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:HG03009_ch_T0000127:1;Name=LOC101928092;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2195266	2199177	.	-	.	source_transcript=hg002_chrY_paternal_36.2;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.2,hg002_chrY_paternal_36.2;transcript_id=HG03009_ch_T0000127;gene_id=HG03009_ch_G0000030;Parent=HG03009_ch_T0000127;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=intron:HG03009_ch_T0000127:1;Name=LOC101928092;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2199178	2199698	.	-	.	source_transcript=hg002_chrY_paternal_36.2;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.2,hg002_chrY_paternal_36.2;transcript_id=HG03009_ch_T0000127;gene_id=HG03009_ch_G0000030;Parent=HG03009_ch_T0000127;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:HG03009_ch_T0000127:2;Name=LOC101928092;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	2191129	2234231	1000	-	.	source_transcript=hg002_chrY_paternal_36.3;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.3,hg002_chrY_paternal_36.3;transcript_id=HG03009_ch_T0000128;gene_id=HG03009_ch_G0000030;Parent=HG03009_ch_G0000030;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=HG03009_ch_T0000128;Name=LOC101928092
HG03009_chrY	CAT	exon	2191129	2192392	.	-	.	source_transcript=hg002_chrY_paternal_36.3;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.3,hg002_chrY_paternal_36.3;transcript_id=HG03009_ch_T0000128;gene_id=HG03009_ch_G0000030;Parent=HG03009_ch_T0000128;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:HG03009_ch_T0000128:0;Name=LOC101928092;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2192393	2195109	.	-	.	source_transcript=hg002_chrY_paternal_36.3;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.3,hg002_chrY_paternal_36.3;transcript_id=HG03009_ch_T0000128;gene_id=HG03009_ch_G0000030;Parent=HG03009_ch_T0000128;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=intron:HG03009_ch_T0000128:0;Name=LOC101928092;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2195110	2195265	.	-	.	source_transcript=hg002_chrY_paternal_36.3;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.3,hg002_chrY_paternal_36.3;transcript_id=HG03009_ch_T0000128;gene_id=HG03009_ch_G0000030;Parent=HG03009_ch_T0000128;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:HG03009_ch_T0000128:1;Name=LOC101928092;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2195266	2234164	.	-	.	source_transcript=hg002_chrY_paternal_36.3;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.3,hg002_chrY_paternal_36.3;transcript_id=HG03009_ch_T0000128;gene_id=HG03009_ch_G0000030;Parent=HG03009_ch_T0000128;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=intron:HG03009_ch_T0000128:1;Name=LOC101928092;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2234165	2234231	.	-	.	source_transcript=hg002_chrY_paternal_36.3;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.3,hg002_chrY_paternal_36.3;transcript_id=HG03009_ch_T0000128;gene_id=HG03009_ch_G0000030;Parent=HG03009_ch_T0000128;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:HG03009_ch_T0000128:2;Name=LOC101928092;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	2191129	2234242	1000	-	.	source_transcript=hg002_chrY_paternal_36.4;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.4,hg002_chrY_paternal_36.4;transcript_id=HG03009_ch_T0000129;gene_id=HG03009_ch_G0000030;Parent=HG03009_ch_G0000030;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=HG03009_ch_T0000129;Name=LOC101928092
HG03009_chrY	CAT	exon	2191129	2192392	.	-	.	source_transcript=hg002_chrY_paternal_36.4;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.4,hg002_chrY_paternal_36.4;transcript_id=HG03009_ch_T0000129;gene_id=HG03009_ch_G0000030;Parent=HG03009_ch_T0000129;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:HG03009_ch_T0000129:0;Name=LOC101928092;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2192393	2195109	.	-	.	source_transcript=hg002_chrY_paternal_36.4;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.4,hg002_chrY_paternal_36.4;transcript_id=HG03009_ch_T0000129;gene_id=HG03009_ch_G0000030;Parent=HG03009_ch_T0000129;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=intron:HG03009_ch_T0000129:0;Name=LOC101928092;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2195110	2195265	.	-	.	source_transcript=hg002_chrY_paternal_36.4;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.4,hg002_chrY_paternal_36.4;transcript_id=HG03009_ch_T0000129;gene_id=HG03009_ch_G0000030;Parent=HG03009_ch_T0000129;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:HG03009_ch_T0000129:1;Name=LOC101928092;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2195266	2199160	.	-	.	source_transcript=hg002_chrY_paternal_36.4;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.4,hg002_chrY_paternal_36.4;transcript_id=HG03009_ch_T0000129;gene_id=HG03009_ch_G0000030;Parent=HG03009_ch_T0000129;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=intron:HG03009_ch_T0000129:1;Name=LOC101928092;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2199161	2199354	.	-	.	source_transcript=hg002_chrY_paternal_36.4;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.4,hg002_chrY_paternal_36.4;transcript_id=HG03009_ch_T0000129;gene_id=HG03009_ch_G0000030;Parent=HG03009_ch_T0000129;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:HG03009_ch_T0000129:2;Name=LOC101928092;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2199355	2234164	.	-	.	source_transcript=hg002_chrY_paternal_36.4;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.4,hg002_chrY_paternal_36.4;transcript_id=HG03009_ch_T0000129;gene_id=HG03009_ch_G0000030;Parent=HG03009_ch_T0000129;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=intron:HG03009_ch_T0000129:2;Name=LOC101928092;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2234165	2234242	.	-	.	source_transcript=hg002_chrY_paternal_36.4;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.4,hg002_chrY_paternal_36.4;transcript_id=HG03009_ch_T0000129;gene_id=HG03009_ch_G0000030;Parent=HG03009_ch_T0000129;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:HG03009_ch_T0000129:3;Name=LOC101928092;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	2191129	2234299	1000	-	.	source_transcript=hg002_chrY_paternal_36.5;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.5,hg002_chrY_paternal_36.5;transcript_id=HG03009_ch_T0000130;gene_id=HG03009_ch_G0000030;Parent=HG03009_ch_G0000030;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=HG03009_ch_T0000130;Name=LOC101928092
HG03009_chrY	CAT	exon	2191129	2192392	.	-	.	source_transcript=hg002_chrY_paternal_36.5;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.5,hg002_chrY_paternal_36.5;transcript_id=HG03009_ch_T0000130;gene_id=HG03009_ch_G0000030;Parent=HG03009_ch_T0000130;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:HG03009_ch_T0000130:0;Name=LOC101928092;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2192393	2234164	.	-	.	source_transcript=hg002_chrY_paternal_36.5;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.5,hg002_chrY_paternal_36.5;transcript_id=HG03009_ch_T0000130;gene_id=HG03009_ch_G0000030;Parent=HG03009_ch_T0000130;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=intron:HG03009_ch_T0000130:0;Name=LOC101928092;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2234165	2234299	.	-	.	source_transcript=hg002_chrY_paternal_36.5;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.5,hg002_chrY_paternal_36.5;transcript_id=HG03009_ch_T0000130;gene_id=HG03009_ch_G0000030;Parent=HG03009_ch_T0000130;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:HG03009_ch_T0000130:1;Name=LOC101928092;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	2234250	2234311	.	+	.	source_gene_common_name=MIR6089;source_gene=hg002_chrY_paternal_37;alternative_source_transcripts=hg002_chrY_paternal_37.1,hg002_chrY_paternal_37.1;gene_id=HG03009_ch_G0000031;gene_biotype=miRNA;gene_name=MIR6089;gene_sources=liftoff;ID=HG03009_ch_G0000031;Name=MIR6089
HG03009_chrY	CAT	transcript	2234250	2234313	1000	+	.	source_transcript=hg002_chrY_paternal_37.1;source_transcript_name=hg002_chrY_paternal_37.1;source_gene=hg002_chrY_paternal_37;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_37;gene_biotype=miRNA;transcript_biotype=primary_transcript;alignment_id=hg002_chrY_paternal_37.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_37.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR6089;alternative_source_transcripts=hg002_chrY_paternal_37.1,hg002_chrY_paternal_37.1;transcript_id=HG03009_ch_T0000131;gene_id=HG03009_ch_G0000031;Parent=HG03009_ch_G0000031;transcript_name=hg002_chrY_paternal_37.1;gene_name=MIR6089;ID=HG03009_ch_T0000131;Name=MIR6089
HG03009_chrY	CAT	exon	2234250	2234313	.	+	.	source_transcript=hg002_chrY_paternal_37.1;source_transcript_name=hg002_chrY_paternal_37.1;source_gene=hg002_chrY_paternal_37;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_37;gene_biotype=miRNA;transcript_biotype=primary_transcript;alignment_id=hg002_chrY_paternal_37.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_37.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR6089;alternative_source_transcripts=hg002_chrY_paternal_37.1,hg002_chrY_paternal_37.1;transcript_id=HG03009_ch_T0000131;gene_id=HG03009_ch_G0000031;Parent=HG03009_ch_T0000131;transcript_name=hg002_chrY_paternal_37.1;gene_name=MIR6089;ID=exon:HG03009_ch_T0000131:0;Name=MIR6089;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	2234288	2234311	1000	+	.	source_transcript=hg002_chrY_paternal_37.2;source_transcript_name=hg002_chrY_paternal_37.1;source_gene=hg002_chrY_paternal_37;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_37;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=hg002_chrY_paternal_37.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_37.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR6089;alternative_source_transcripts=hg002_chrY_paternal_37.2,hg002_chrY_paternal_37.2;transcript_id=HG03009_ch_T0000132;gene_id=HG03009_ch_G0000031;Parent=HG03009_ch_G0000031;transcript_name=hg002_chrY_paternal_37.1;gene_name=MIR6089;ID=HG03009_ch_T0000132;Name=MIR6089
HG03009_chrY	CAT	exon	2234288	2234311	.	+	.	source_transcript=hg002_chrY_paternal_37.2;source_transcript_name=hg002_chrY_paternal_37.1;source_gene=hg002_chrY_paternal_37;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_37;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=hg002_chrY_paternal_37.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_37.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR6089;alternative_source_transcripts=hg002_chrY_paternal_37.2,hg002_chrY_paternal_37.2;transcript_id=HG03009_ch_T0000132;gene_id=HG03009_ch_G0000031;Parent=HG03009_ch_T0000132;transcript_name=hg002_chrY_paternal_37.1;gene_name=MIR6089;ID=exon:HG03009_ch_T0000132:0;Name=MIR6089;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	2234324	2282504	.	+	.	source_gene_common_name=CD99P1;source_gene=hg002_chrY_paternal_38;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;gene_id=HG03009_ch_G0000032;gene_biotype=transcribed_pseudogene;gene_name=CD99P1;gene_sources=liftoff;ID=HG03009_ch_G0000032;Name=CD99P1
HG03009_chrY	CAT	transcript	2234324	2263585	1000	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG03009_ch_T0000133;gene_id=HG03009_ch_G0000032;Parent=HG03009_ch_G0000032;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=HG03009_ch_T0000133;Name=CD99P1
HG03009_chrY	CAT	exon	2234324	2234528	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG03009_ch_T0000133;gene_id=HG03009_ch_G0000032;Parent=HG03009_ch_T0000133;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG03009_ch_T0000133:0;Name=CD99P1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2234529	2236028	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG03009_ch_T0000133;gene_id=HG03009_ch_G0000032;Parent=HG03009_ch_T0000133;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:HG03009_ch_T0000133:0;Name=CD99P1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2236029	2236071	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG03009_ch_T0000133;gene_id=HG03009_ch_G0000032;Parent=HG03009_ch_T0000133;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG03009_ch_T0000133:1;Name=CD99P1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2236072	2237174	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG03009_ch_T0000133;gene_id=HG03009_ch_G0000032;Parent=HG03009_ch_T0000133;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:HG03009_ch_T0000133:1;Name=CD99P1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2237175	2237243	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG03009_ch_T0000133;gene_id=HG03009_ch_G0000032;Parent=HG03009_ch_T0000133;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG03009_ch_T0000133:2;Name=CD99P1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2237244	2240839	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG03009_ch_T0000133;gene_id=HG03009_ch_G0000032;Parent=HG03009_ch_T0000133;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:HG03009_ch_T0000133:2;Name=CD99P1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2240840	2240993	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG03009_ch_T0000133;gene_id=HG03009_ch_G0000032;Parent=HG03009_ch_T0000133;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG03009_ch_T0000133:3;Name=CD99P1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2240994	2243759	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG03009_ch_T0000133;gene_id=HG03009_ch_G0000032;Parent=HG03009_ch_T0000133;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:HG03009_ch_T0000133:3;Name=CD99P1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2243760	2243804	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG03009_ch_T0000133;gene_id=HG03009_ch_G0000032;Parent=HG03009_ch_T0000133;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG03009_ch_T0000133:4;Name=CD99P1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2243805	2244448	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG03009_ch_T0000133;gene_id=HG03009_ch_G0000032;Parent=HG03009_ch_T0000133;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:HG03009_ch_T0000133:4;Name=CD99P1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2244449	2244517	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG03009_ch_T0000133;gene_id=HG03009_ch_G0000032;Parent=HG03009_ch_T0000133;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG03009_ch_T0000133:5;Name=CD99P1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2244518	2247712	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG03009_ch_T0000133;gene_id=HG03009_ch_G0000032;Parent=HG03009_ch_T0000133;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:HG03009_ch_T0000133:5;Name=CD99P1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2247713	2247757	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG03009_ch_T0000133;gene_id=HG03009_ch_G0000032;Parent=HG03009_ch_T0000133;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG03009_ch_T0000133:6;Name=CD99P1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2247758	2248407	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG03009_ch_T0000133;gene_id=HG03009_ch_G0000032;Parent=HG03009_ch_T0000133;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:HG03009_ch_T0000133:6;Name=CD99P1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2248408	2248476	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG03009_ch_T0000133;gene_id=HG03009_ch_G0000032;Parent=HG03009_ch_T0000133;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG03009_ch_T0000133:7;Name=CD99P1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2248477	2251624	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG03009_ch_T0000133;gene_id=HG03009_ch_G0000032;Parent=HG03009_ch_T0000133;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:HG03009_ch_T0000133:7;Name=CD99P1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2251625	2251670	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG03009_ch_T0000133;gene_id=HG03009_ch_G0000032;Parent=HG03009_ch_T0000133;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG03009_ch_T0000133:8;Name=CD99P1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2251671	2263229	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG03009_ch_T0000133;gene_id=HG03009_ch_G0000032;Parent=HG03009_ch_T0000133;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:HG03009_ch_T0000133:8;Name=CD99P1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2263230	2263585	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG03009_ch_T0000133;gene_id=HG03009_ch_G0000032;Parent=HG03009_ch_T0000133;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG03009_ch_T0000133:9;Name=CD99P1;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	2234324	2282504	1000	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG03009_ch_T0000134;gene_id=HG03009_ch_G0000032;Parent=HG03009_ch_G0000032;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=HG03009_ch_T0000134;Name=CD99P1
HG03009_chrY	CAT	exon	2234324	2234528	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG03009_ch_T0000134;gene_id=HG03009_ch_G0000032;Parent=HG03009_ch_T0000134;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG03009_ch_T0000134:0;Name=CD99P1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2234529	2236028	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG03009_ch_T0000134;gene_id=HG03009_ch_G0000032;Parent=HG03009_ch_T0000134;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:HG03009_ch_T0000134:0;Name=CD99P1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2236029	2236071	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG03009_ch_T0000134;gene_id=HG03009_ch_G0000032;Parent=HG03009_ch_T0000134;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG03009_ch_T0000134:1;Name=CD99P1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2236072	2237174	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG03009_ch_T0000134;gene_id=HG03009_ch_G0000032;Parent=HG03009_ch_T0000134;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:HG03009_ch_T0000134:1;Name=CD99P1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2237175	2237243	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG03009_ch_T0000134;gene_id=HG03009_ch_G0000032;Parent=HG03009_ch_T0000134;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG03009_ch_T0000134:2;Name=CD99P1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2237244	2240839	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG03009_ch_T0000134;gene_id=HG03009_ch_G0000032;Parent=HG03009_ch_T0000134;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:HG03009_ch_T0000134:2;Name=CD99P1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2240840	2240993	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG03009_ch_T0000134;gene_id=HG03009_ch_G0000032;Parent=HG03009_ch_T0000134;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG03009_ch_T0000134:3;Name=CD99P1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2240994	2243759	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG03009_ch_T0000134;gene_id=HG03009_ch_G0000032;Parent=HG03009_ch_T0000134;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:HG03009_ch_T0000134:3;Name=CD99P1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2243760	2243804	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG03009_ch_T0000134;gene_id=HG03009_ch_G0000032;Parent=HG03009_ch_T0000134;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG03009_ch_T0000134:4;Name=CD99P1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2243805	2244448	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG03009_ch_T0000134;gene_id=HG03009_ch_G0000032;Parent=HG03009_ch_T0000134;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:HG03009_ch_T0000134:4;Name=CD99P1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2244449	2244517	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG03009_ch_T0000134;gene_id=HG03009_ch_G0000032;Parent=HG03009_ch_T0000134;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG03009_ch_T0000134:5;Name=CD99P1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2244518	2248407	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG03009_ch_T0000134;gene_id=HG03009_ch_G0000032;Parent=HG03009_ch_T0000134;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:HG03009_ch_T0000134:5;Name=CD99P1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2248408	2248476	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG03009_ch_T0000134;gene_id=HG03009_ch_G0000032;Parent=HG03009_ch_T0000134;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG03009_ch_T0000134:6;Name=CD99P1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2248477	2251624	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG03009_ch_T0000134;gene_id=HG03009_ch_G0000032;Parent=HG03009_ch_T0000134;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:HG03009_ch_T0000134:6;Name=CD99P1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2251625	2251670	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG03009_ch_T0000134;gene_id=HG03009_ch_G0000032;Parent=HG03009_ch_T0000134;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG03009_ch_T0000134:7;Name=CD99P1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2251671	2280301	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG03009_ch_T0000134;gene_id=HG03009_ch_G0000032;Parent=HG03009_ch_T0000134;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:HG03009_ch_T0000134:7;Name=CD99P1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2280302	2282504	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG03009_ch_T0000134;gene_id=HG03009_ch_G0000032;Parent=HG03009_ch_T0000134;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG03009_ch_T0000134:8;Name=CD99P1;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	2238016	2240371	.	-	.	source_gene_common_name=LINC00102;source_gene=hg002_chrY_paternal_39;alternative_source_transcripts=hg002_chrY_paternal_39.1,hg002_chrY_paternal_39.1;gene_id=HG03009_ch_G0000033;gene_biotype=lncRNA;gene_name=LINC00102;gene_sources=liftoff;ID=HG03009_ch_G0000033;Name=LINC00102
HG03009_chrY	CAT	transcript	2238016	2240371	1000	-	.	source_transcript=hg002_chrY_paternal_39.1;source_transcript_name=hg002_chrY_paternal_39.1;source_gene=hg002_chrY_paternal_39;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_39;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_39.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_39.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00102;alternative_source_transcripts=hg002_chrY_paternal_39.1,hg002_chrY_paternal_39.1;transcript_id=HG03009_ch_T0000135;gene_id=HG03009_ch_G0000033;Parent=HG03009_ch_G0000033;transcript_name=hg002_chrY_paternal_39.1;gene_name=LINC00102;ID=HG03009_ch_T0000135;Name=LINC00102
HG03009_chrY	CAT	exon	2238016	2238721	.	-	.	source_transcript=hg002_chrY_paternal_39.1;source_transcript_name=hg002_chrY_paternal_39.1;source_gene=hg002_chrY_paternal_39;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_39;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_39.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_39.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00102;alternative_source_transcripts=hg002_chrY_paternal_39.1,hg002_chrY_paternal_39.1;transcript_id=HG03009_ch_T0000135;gene_id=HG03009_ch_G0000033;Parent=HG03009_ch_T0000135;transcript_name=hg002_chrY_paternal_39.1;gene_name=LINC00102;ID=exon:HG03009_ch_T0000135:0;Name=LINC00102;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2238722	2239740	.	-	.	source_transcript=hg002_chrY_paternal_39.1;source_transcript_name=hg002_chrY_paternal_39.1;source_gene=hg002_chrY_paternal_39;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_39;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_39.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_39.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00102;alternative_source_transcripts=hg002_chrY_paternal_39.1,hg002_chrY_paternal_39.1;transcript_id=HG03009_ch_T0000135;gene_id=HG03009_ch_G0000033;Parent=HG03009_ch_T0000135;transcript_name=hg002_chrY_paternal_39.1;gene_name=LINC00102;ID=intron:HG03009_ch_T0000135:0;Name=LINC00102;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2239741	2240371	.	-	.	source_transcript=hg002_chrY_paternal_39.1;source_transcript_name=hg002_chrY_paternal_39.1;source_gene=hg002_chrY_paternal_39;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_39;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_39.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_39.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00102;alternative_source_transcripts=hg002_chrY_paternal_39.1,hg002_chrY_paternal_39.1;transcript_id=HG03009_ch_T0000135;gene_id=HG03009_ch_G0000033;Parent=HG03009_ch_T0000135;transcript_name=hg002_chrY_paternal_39.1;gene_name=LINC00102;ID=exon:HG03009_ch_T0000135:1;Name=LINC00102;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	2316103	2366132	.	+	.	source_gene_common_name=CD99;source_gene=hg002_chrY_paternal_40;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;gene_id=HG03009_ch_G0000034;gene_biotype=protein_coding;gene_name=CD99;gene_sources=liftoff,augTM;ID=HG03009_ch_G0000034;Name=CD99
HG03009_chrY	CAT	transcript	2316103	2361259	100	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000136;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_G0000034;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=HG03009_ch_T0000136;Name=CD99
HG03009_chrY	CAT	exon	2316103	2316235	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000136;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03009_ch_T0000136:0;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2316169	2316235	.	+	0	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000136;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03009_ch_T0000136:0;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	2316169	2316171	.	+	0	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000136;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=start_codon:HG03009_ch_T0000136;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2316236	2339242	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000136;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03009_ch_T0000136:0;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2339243	2339275	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000136;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03009_ch_T0000136:1;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2339243	2339275	.	+	2	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000136;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03009_ch_T0000136:1;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2339276	2342426	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000136;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03009_ch_T0000136:1;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2342427	2342474	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000136;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03009_ch_T0000136:2;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2342427	2342474	.	+	2	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000136;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03009_ch_T0000136:2;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2342475	2344482	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000136;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03009_ch_T0000136:2;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2344483	2344527	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000136;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03009_ch_T0000136:3;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2344483	2344527	.	+	2	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000136;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03009_ch_T0000136:3;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2344528	2345177	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000136;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03009_ch_T0000136:3;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2345178	2345246	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000136;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03009_ch_T0000136:4;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2345178	2345246	.	+	2	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000136;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03009_ch_T0000136:4;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2345247	2347448	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000136;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03009_ch_T0000136:4;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2347449	2347496	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000136;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03009_ch_T0000136:5;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2347449	2347496	.	+	2	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000136;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03009_ch_T0000136:5;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2347497	2348135	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000136;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03009_ch_T0000136:5;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2348136	2348186	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000136;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03009_ch_T0000136:6;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2348136	2348186	.	+	2	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000136;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03009_ch_T0000136:6;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2348187	2351081	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000136;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03009_ch_T0000136:6;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2351082	2351195	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000136;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03009_ch_T0000136:7;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2351082	2351195	.	+	2	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000136;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03009_ch_T0000136:7;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2351196	2358178	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000136;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03009_ch_T0000136:7;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2358179	2361259	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000136;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03009_ch_T0000136:8;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2358179	2358186	.	+	2	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000136;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03009_ch_T0000136:8;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	2358184	2358186	.	+	0	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000136;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=stop_codon:HG03009_ch_T0000136;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	2316103	2366132	100	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000137;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_G0000034;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=HG03009_ch_T0000137;Name=CD99
HG03009_chrY	CAT	exon	2316103	2316235	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000137;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000137;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03009_ch_T0000137:0;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2316169	2316235	.	+	0	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000137;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000137;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03009_ch_T0000137:0;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	2316169	2316171	.	+	0	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000137;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000137;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=start_codon:HG03009_ch_T0000137;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2316236	2339242	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000137;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000137;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03009_ch_T0000137:0;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2339243	2339275	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000137;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000137;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03009_ch_T0000137:1;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2339243	2339275	.	+	2	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000137;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000137;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03009_ch_T0000137:1;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2339276	2344482	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000137;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000137;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03009_ch_T0000137:1;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2344483	2344527	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000137;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000137;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03009_ch_T0000137:2;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2344483	2344527	.	+	2	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000137;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000137;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03009_ch_T0000137:2;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2344528	2345177	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000137;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000137;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03009_ch_T0000137:2;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2345178	2345246	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000137;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000137;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03009_ch_T0000137:3;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2345178	2345246	.	+	2	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000137;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000137;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03009_ch_T0000137:3;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2345247	2347448	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000137;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000137;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03009_ch_T0000137:3;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2347449	2347496	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000137;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000137;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03009_ch_T0000137:4;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2347449	2347496	.	+	2	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000137;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000137;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03009_ch_T0000137:4;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2347497	2348135	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000137;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000137;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03009_ch_T0000137:4;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2348136	2348186	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000137;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000137;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03009_ch_T0000137:5;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2348136	2348186	.	+	2	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000137;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000137;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03009_ch_T0000137:5;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2348187	2351081	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000137;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000137;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03009_ch_T0000137:5;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2351082	2351195	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000137;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000137;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03009_ch_T0000137:6;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2351082	2351195	.	+	2	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000137;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000137;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03009_ch_T0000137:6;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2351196	2363022	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000137;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000137;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03009_ch_T0000137:6;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2363023	2363079	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000137;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000137;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03009_ch_T0000137:7;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2363023	2363079	.	+	2	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000137;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000137;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03009_ch_T0000137:7;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2363080	2365601	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000137;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000137;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03009_ch_T0000137:7;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2365602	2366132	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000137;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000137;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03009_ch_T0000137:8;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2365602	2365627	.	+	2	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000137;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000137;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03009_ch_T0000137:8;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	2365625	2365627	.	+	0	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000137;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000137;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=stop_codon:HG03009_ch_T0000137;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	2316103	2366132	100	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000138;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_G0000034;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=HG03009_ch_T0000138;Name=CD99
HG03009_chrY	CAT	exon	2316103	2316235	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000138;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000138;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03009_ch_T0000138:0;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2316169	2316235	.	+	0	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000138;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000138;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03009_ch_T0000138:0;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	2316169	2316171	.	+	0	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000138;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000138;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=start_codon:HG03009_ch_T0000138;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2316236	2339242	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000138;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000138;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03009_ch_T0000138:0;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2339243	2339275	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000138;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000138;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03009_ch_T0000138:1;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2339243	2339275	.	+	2	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000138;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000138;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03009_ch_T0000138:1;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2339276	2342426	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000138;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000138;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03009_ch_T0000138:1;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2342427	2342474	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000138;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000138;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03009_ch_T0000138:2;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2342427	2342474	.	+	2	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000138;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000138;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03009_ch_T0000138:2;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2342475	2344482	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000138;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000138;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03009_ch_T0000138:2;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2344483	2344527	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000138;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000138;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03009_ch_T0000138:3;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2344483	2344527	.	+	2	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000138;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000138;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03009_ch_T0000138:3;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2344528	2345177	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000138;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000138;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03009_ch_T0000138:3;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2345178	2345246	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000138;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000138;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03009_ch_T0000138:4;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2345178	2345246	.	+	2	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000138;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000138;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03009_ch_T0000138:4;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2345247	2347448	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000138;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000138;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03009_ch_T0000138:4;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2347449	2347496	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000138;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000138;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03009_ch_T0000138:5;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2347449	2347496	.	+	2	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000138;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000138;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03009_ch_T0000138:5;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2347497	2348135	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000138;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000138;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03009_ch_T0000138:5;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2348136	2348186	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000138;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000138;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03009_ch_T0000138:6;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2348136	2348186	.	+	2	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000138;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000138;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03009_ch_T0000138:6;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2348187	2351081	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000138;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000138;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03009_ch_T0000138:6;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2351082	2351195	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000138;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000138;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03009_ch_T0000138:7;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2351082	2351195	.	+	2	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000138;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000138;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03009_ch_T0000138:7;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2351196	2363025	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000138;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000138;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03009_ch_T0000138:7;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2363026	2363079	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000138;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000138;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03009_ch_T0000138:8;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2363026	2363079	.	+	2	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000138;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000138;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03009_ch_T0000138:8;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2363080	2365601	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000138;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000138;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03009_ch_T0000138:8;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2365602	2366132	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000138;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000138;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03009_ch_T0000138:9;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2365602	2365627	.	+	2	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000138;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000138;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03009_ch_T0000138:9;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	2365625	2365627	.	+	0	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000138;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000138;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=stop_codon:HG03009_ch_T0000138;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	2316103	2366132	100	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000139;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_G0000034;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=HG03009_ch_T0000139;Name=CD99
HG03009_chrY	CAT	exon	2316103	2316235	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000139;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000139;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03009_ch_T0000139:0;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2316169	2316235	.	+	0	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000139;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000139;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03009_ch_T0000139:0;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	2316169	2316171	.	+	0	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000139;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000139;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=start_codon:HG03009_ch_T0000139;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2316236	2339242	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000139;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000139;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03009_ch_T0000139:0;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2339243	2339275	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000139;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000139;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03009_ch_T0000139:1;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2339243	2339275	.	+	2	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000139;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000139;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03009_ch_T0000139:1;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2339276	2344482	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000139;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000139;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03009_ch_T0000139:1;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2344483	2344527	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000139;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000139;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03009_ch_T0000139:2;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2344483	2344527	.	+	2	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000139;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000139;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03009_ch_T0000139:2;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2344528	2345177	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000139;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000139;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03009_ch_T0000139:2;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2345178	2345246	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000139;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000139;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03009_ch_T0000139:3;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2345178	2345246	.	+	2	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000139;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000139;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03009_ch_T0000139:3;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2345247	2347448	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000139;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000139;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03009_ch_T0000139:3;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2347449	2347496	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000139;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000139;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03009_ch_T0000139:4;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2347449	2347496	.	+	2	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000139;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000139;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03009_ch_T0000139:4;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2347497	2348135	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000139;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000139;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03009_ch_T0000139:4;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2348136	2348186	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000139;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000139;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03009_ch_T0000139:5;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2348136	2348186	.	+	2	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000139;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000139;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03009_ch_T0000139:5;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2348187	2351081	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000139;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000139;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03009_ch_T0000139:5;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2351082	2351195	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000139;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000139;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03009_ch_T0000139:6;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2351082	2351195	.	+	2	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000139;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000139;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03009_ch_T0000139:6;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2351196	2363025	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000139;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000139;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03009_ch_T0000139:6;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2363026	2363079	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000139;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000139;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03009_ch_T0000139:7;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2363026	2363079	.	+	2	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000139;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000139;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03009_ch_T0000139:7;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2363080	2365601	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000139;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000139;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03009_ch_T0000139:7;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2365602	2366132	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000139;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000139;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03009_ch_T0000139:8;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2365602	2365627	.	+	2	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000139;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000139;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03009_ch_T0000139:8;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	2365625	2365627	.	+	0	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000139;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000139;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=stop_codon:HG03009_ch_T0000139;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	2316103	2366132	100	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000140;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_G0000034;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=HG03009_ch_T0000140;Name=CD99
HG03009_chrY	CAT	exon	2316103	2316235	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000140;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000140;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03009_ch_T0000140:0;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2316169	2316235	.	+	0	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000140;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000140;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03009_ch_T0000140:0;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	2316169	2316171	.	+	0	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000140;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000140;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=start_codon:HG03009_ch_T0000140;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2316236	2339242	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000140;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000140;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03009_ch_T0000140:0;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2339243	2339275	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000140;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000140;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03009_ch_T0000140:1;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2339243	2339275	.	+	2	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000140;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000140;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03009_ch_T0000140:1;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2339276	2342426	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000140;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000140;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03009_ch_T0000140:1;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2342427	2342474	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000140;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000140;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03009_ch_T0000140:2;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2342427	2342474	.	+	2	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000140;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000140;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03009_ch_T0000140:2;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2342475	2344482	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000140;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000140;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03009_ch_T0000140:2;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2344483	2344527	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000140;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000140;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03009_ch_T0000140:3;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2344483	2344527	.	+	2	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000140;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000140;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03009_ch_T0000140:3;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2344528	2345177	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000140;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000140;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03009_ch_T0000140:3;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2345178	2345246	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000140;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000140;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03009_ch_T0000140:4;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2345178	2345246	.	+	2	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000140;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000140;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03009_ch_T0000140:4;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2345247	2347448	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000140;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000140;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03009_ch_T0000140:4;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2347449	2347496	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000140;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000140;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03009_ch_T0000140:5;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2347449	2347496	.	+	2	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000140;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000140;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03009_ch_T0000140:5;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2347497	2351081	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000140;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000140;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03009_ch_T0000140:5;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2351082	2351195	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000140;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000140;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03009_ch_T0000140:6;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2351082	2351195	.	+	2	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000140;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000140;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03009_ch_T0000140:6;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2351196	2363022	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000140;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000140;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03009_ch_T0000140:6;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2363023	2363079	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000140;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000140;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03009_ch_T0000140:7;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2363023	2363079	.	+	2	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000140;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000140;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03009_ch_T0000140:7;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2363080	2365601	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000140;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000140;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03009_ch_T0000140:7;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2365602	2366132	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000140;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000140;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03009_ch_T0000140:8;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2365602	2365627	.	+	2	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000140;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000140;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03009_ch_T0000140:8;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	2365625	2365627	.	+	0	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000140;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000140;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=stop_codon:HG03009_ch_T0000140;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	2316103	2366132	100	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000141;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_G0000034;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=HG03009_ch_T0000141;Name=CD99
HG03009_chrY	CAT	exon	2316103	2316235	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000141;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000141;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03009_ch_T0000141:0;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2316169	2316235	.	+	0	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000141;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000141;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03009_ch_T0000141:0;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	2316169	2316171	.	+	0	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000141;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000141;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=start_codon:HG03009_ch_T0000141;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2316236	2339242	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000141;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000141;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03009_ch_T0000141:0;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2339243	2339275	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000141;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000141;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03009_ch_T0000141:1;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2339243	2339275	.	+	2	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000141;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000141;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03009_ch_T0000141:1;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2339276	2342426	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000141;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000141;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03009_ch_T0000141:1;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2342427	2342474	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000141;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000141;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03009_ch_T0000141:2;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2342427	2342474	.	+	2	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000141;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000141;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03009_ch_T0000141:2;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2342475	2344482	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000141;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000141;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03009_ch_T0000141:2;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2344483	2344527	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000141;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000141;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03009_ch_T0000141:3;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2344483	2344527	.	+	2	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000141;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000141;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03009_ch_T0000141:3;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2344528	2345177	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000141;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000141;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03009_ch_T0000141:3;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2345178	2345246	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000141;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000141;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03009_ch_T0000141:4;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2345178	2345246	.	+	2	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000141;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000141;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03009_ch_T0000141:4;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2345247	2347448	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000141;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000141;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03009_ch_T0000141:4;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2347449	2347496	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000141;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000141;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03009_ch_T0000141:5;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2347449	2347496	.	+	2	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000141;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000141;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03009_ch_T0000141:5;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2347497	2348135	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000141;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000141;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03009_ch_T0000141:5;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2348136	2348186	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000141;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000141;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03009_ch_T0000141:6;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2348136	2348186	.	+	2	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000141;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000141;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03009_ch_T0000141:6;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2348187	2351081	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000141;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000141;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03009_ch_T0000141:6;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2351082	2351195	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000141;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000141;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03009_ch_T0000141:7;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2351082	2351195	.	+	2	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000141;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000141;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03009_ch_T0000141:7;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2351196	2363022	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000141;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000141;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03009_ch_T0000141:7;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2363023	2363079	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000141;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000141;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03009_ch_T0000141:8;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2363023	2363079	.	+	2	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000141;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000141;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03009_ch_T0000141:8;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2363080	2365601	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000141;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000141;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03009_ch_T0000141:8;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2365602	2366132	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000141;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000141;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03009_ch_T0000141:9;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2365602	2365627	.	+	2	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000141;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000141;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03009_ch_T0000141:9;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	2365625	2365627	.	+	0	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000141;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000141;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=stop_codon:HG03009_ch_T0000141;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	2316103	2366132	1000	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000142;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_G0000034;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=HG03009_ch_T0000142;Name=CD99
HG03009_chrY	CAT	exon	2316103	2316235	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000142;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000142;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=exon:HG03009_ch_T0000142:0;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2316236	2339242	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000142;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000142;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=intron:HG03009_ch_T0000142:0;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2339243	2339275	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000142;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000142;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=exon:HG03009_ch_T0000142:1;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2339276	2342426	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000142;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000142;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=intron:HG03009_ch_T0000142:1;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2342427	2342474	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000142;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000142;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=exon:HG03009_ch_T0000142:2;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2342475	2344482	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000142;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000142;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=intron:HG03009_ch_T0000142:2;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2344483	2344527	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000142;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000142;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=exon:HG03009_ch_T0000142:3;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2344528	2345177	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000142;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000142;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=intron:HG03009_ch_T0000142:3;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2345178	2345246	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000142;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000142;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=exon:HG03009_ch_T0000142:4;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2345247	2347448	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000142;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000142;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=intron:HG03009_ch_T0000142:4;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2347449	2347496	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000142;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000142;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=exon:HG03009_ch_T0000142:5;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2347497	2348135	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000142;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000142;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=intron:HG03009_ch_T0000142:5;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2348136	2348186	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000142;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000142;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=exon:HG03009_ch_T0000142:6;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2348187	2351081	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000142;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000142;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=intron:HG03009_ch_T0000142:6;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2351082	2351195	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000142;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000142;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=exon:HG03009_ch_T0000142:7;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2351196	2358178	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000142;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000142;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=intron:HG03009_ch_T0000142:7;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2358179	2358196	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000142;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000142;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=exon:HG03009_ch_T0000142:8;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2358197	2363025	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000142;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000142;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=intron:HG03009_ch_T0000142:8;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2363026	2363079	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000142;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000142;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=exon:HG03009_ch_T0000142:9;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2363080	2365601	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000142;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000142;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=intron:HG03009_ch_T0000142:9;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2365602	2366132	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000142;gene_id=HG03009_ch_G0000034;Parent=HG03009_ch_T0000142;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=exon:HG03009_ch_T0000142:10;Name=CD99;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	2377125	2399715	.	+	.	source_gene_common_name=XGY2;source_gene=hg002_chrY_paternal_41;alternative_source_transcripts=hg002_chrY_paternal_41.1,hg002_chrY_paternal_41.1;gene_id=HG03009_ch_G0000035;gene_biotype=transcribed_pseudogene;gene_name=XGY2;gene_sources=liftoff;ID=HG03009_ch_G0000035;Name=XGY2
HG03009_chrY	CAT	transcript	2377125	2399715	1000	+	.	source_transcript=hg002_chrY_paternal_41.1;source_transcript_name=hg002_chrY_paternal_41.1;source_gene=hg002_chrY_paternal_41;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_41;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_41.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_41.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;alternative_source_transcripts=hg002_chrY_paternal_41.1,hg002_chrY_paternal_41.1;transcript_id=HG03009_ch_T0000143;gene_id=HG03009_ch_G0000035;Parent=HG03009_ch_G0000035;transcript_name=hg002_chrY_paternal_41.1;gene_name=XGY2;ID=HG03009_ch_T0000143;Name=XGY2
HG03009_chrY	CAT	exon	2377125	2377164	.	+	.	source_transcript=hg002_chrY_paternal_41.1;source_transcript_name=hg002_chrY_paternal_41.1;source_gene=hg002_chrY_paternal_41;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_41;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_41.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_41.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;alternative_source_transcripts=hg002_chrY_paternal_41.1,hg002_chrY_paternal_41.1;transcript_id=HG03009_ch_T0000143;gene_id=HG03009_ch_G0000035;Parent=HG03009_ch_T0000143;transcript_name=hg002_chrY_paternal_41.1;gene_name=XGY2;ID=exon:HG03009_ch_T0000143:0;Name=XGY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2377165	2395342	.	+	.	source_transcript=hg002_chrY_paternal_41.1;source_transcript_name=hg002_chrY_paternal_41.1;source_gene=hg002_chrY_paternal_41;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_41;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_41.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_41.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;alternative_source_transcripts=hg002_chrY_paternal_41.1,hg002_chrY_paternal_41.1;transcript_id=HG03009_ch_T0000143;gene_id=HG03009_ch_G0000035;Parent=HG03009_ch_T0000143;transcript_name=hg002_chrY_paternal_41.1;gene_name=XGY2;ID=intron:HG03009_ch_T0000143:0;Name=XGY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2395343	2395384	.	+	.	source_transcript=hg002_chrY_paternal_41.1;source_transcript_name=hg002_chrY_paternal_41.1;source_gene=hg002_chrY_paternal_41;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_41;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_41.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_41.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;alternative_source_transcripts=hg002_chrY_paternal_41.1,hg002_chrY_paternal_41.1;transcript_id=HG03009_ch_T0000143;gene_id=HG03009_ch_G0000035;Parent=HG03009_ch_T0000143;transcript_name=hg002_chrY_paternal_41.1;gene_name=XGY2;ID=exon:HG03009_ch_T0000143:1;Name=XGY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2395385	2399434	.	+	.	source_transcript=hg002_chrY_paternal_41.1;source_transcript_name=hg002_chrY_paternal_41.1;source_gene=hg002_chrY_paternal_41;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_41;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_41.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_41.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;alternative_source_transcripts=hg002_chrY_paternal_41.1,hg002_chrY_paternal_41.1;transcript_id=HG03009_ch_T0000143;gene_id=HG03009_ch_G0000035;Parent=HG03009_ch_T0000143;transcript_name=hg002_chrY_paternal_41.1;gene_name=XGY2;ID=intron:HG03009_ch_T0000143:1;Name=XGY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2399435	2399715	.	+	.	source_transcript=hg002_chrY_paternal_41.1;source_transcript_name=hg002_chrY_paternal_41.1;source_gene=hg002_chrY_paternal_41;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_41;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_41.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_41.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;alternative_source_transcripts=hg002_chrY_paternal_41.1,hg002_chrY_paternal_41.1;transcript_id=HG03009_ch_T0000143;gene_id=HG03009_ch_G0000035;Parent=HG03009_ch_T0000143;transcript_name=hg002_chrY_paternal_41.1;gene_name=XGY2;ID=exon:HG03009_ch_T0000143:2;Name=XGY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	2411571	2412398	.	-	.	source_gene_common_name=SRY;source_gene=hg002_chrY_paternal_43;alternative_source_transcripts=hg002_chrY_paternal_43.1,hg002_chrY_paternal_43.1;gene_id=HG03009_ch_G0000036;gene_biotype=protein_coding;gene_name=SRY;gene_sources=liftoff,augTM;ID=HG03009_ch_G0000036;Name=SRY
HG03009_chrY	CAT	transcript	2411571	2412398	100	-	.	source_transcript=hg002_chrY_paternal_43.1;source_transcript_name=hg002_chrY_paternal_43.1;source_gene=hg002_chrY_paternal_43;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_43;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_43.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_43.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SRY;alternative_source_transcripts=hg002_chrY_paternal_43.1,hg002_chrY_paternal_43.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000144;gene_id=HG03009_ch_G0000036;Parent=HG03009_ch_G0000036;transcript_name=hg002_chrY_paternal_43.1;gene_name=SRY;ID=HG03009_ch_T0000144;Name=SRY
HG03009_chrY	CAT	exon	2411571	2412398	.	-	.	source_transcript=hg002_chrY_paternal_43.1;source_transcript_name=hg002_chrY_paternal_43.1;source_gene=hg002_chrY_paternal_43;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_43;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_43.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_43.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SRY;alternative_source_transcripts=hg002_chrY_paternal_43.1,hg002_chrY_paternal_43.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000144;gene_id=HG03009_ch_G0000036;Parent=HG03009_ch_T0000144;transcript_name=hg002_chrY_paternal_43.1;gene_name=SRY;ID=exon:HG03009_ch_T0000144:0;Name=SRY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2411705	2412319	.	-	0	source_transcript=hg002_chrY_paternal_43.1;source_transcript_name=hg002_chrY_paternal_43.1;source_gene=hg002_chrY_paternal_43;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_43;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_43.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_43.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SRY;alternative_source_transcripts=hg002_chrY_paternal_43.1,hg002_chrY_paternal_43.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000144;gene_id=HG03009_ch_G0000036;Parent=HG03009_ch_T0000144;transcript_name=hg002_chrY_paternal_43.1;gene_name=SRY;ID=CDS:HG03009_ch_T0000144:0;Name=SRY;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	2411705	2411707	.	-	0	source_transcript=hg002_chrY_paternal_43.1;source_transcript_name=hg002_chrY_paternal_43.1;source_gene=hg002_chrY_paternal_43;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_43;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_43.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_43.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SRY;alternative_source_transcripts=hg002_chrY_paternal_43.1,hg002_chrY_paternal_43.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000144;gene_id=HG03009_ch_G0000036;Parent=HG03009_ch_T0000144;transcript_name=hg002_chrY_paternal_43.1;gene_name=SRY;ID=stop_codon:HG03009_ch_T0000144;Name=SRY;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	2412317	2412319	.	-	0	source_transcript=hg002_chrY_paternal_43.1;source_transcript_name=hg002_chrY_paternal_43.1;source_gene=hg002_chrY_paternal_43;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_43;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_43.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_43.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SRY;alternative_source_transcripts=hg002_chrY_paternal_43.1,hg002_chrY_paternal_43.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000144;gene_id=HG03009_ch_G0000036;Parent=HG03009_ch_T0000144;transcript_name=hg002_chrY_paternal_43.1;gene_name=SRY;ID=start_codon:HG03009_ch_T0000144;Name=SRY;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	2466303	2491969	.	+	.	source_gene_common_name=RPS4Y1;source_gene=hg002_chrY_paternal_46;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;gene_id=HG03009_ch_G0000037;gene_biotype=protein_coding;gene_name=RPS4Y1;gene_sources=liftoff,augTM;ID=HG03009_ch_G0000037;Name=RPS4Y1
HG03009_chrY	CAT	transcript	2466303	2491969	100	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000145;gene_id=HG03009_ch_G0000037;Parent=HG03009_ch_G0000037;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=HG03009_ch_T0000145;Name=RPS4Y1
HG03009_chrY	CAT	exon	2466303	2466328	.	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000145;gene_id=HG03009_ch_G0000037;Parent=HG03009_ch_T0000145;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:HG03009_ch_T0000145:0;Name=RPS4Y1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2466326	2466328	.	+	0	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000145;gene_id=HG03009_ch_G0000037;Parent=HG03009_ch_T0000145;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:HG03009_ch_T0000145:0;Name=RPS4Y1;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	2466326	2466328	.	+	0	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000145;gene_id=HG03009_ch_G0000037;Parent=HG03009_ch_T0000145;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=start_codon:HG03009_ch_T0000145;Name=RPS4Y1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2466329	2466865	.	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000145;gene_id=HG03009_ch_G0000037;Parent=HG03009_ch_T0000145;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=intron:HG03009_ch_T0000145:0;Name=RPS4Y1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2466866	2466943	.	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000145;gene_id=HG03009_ch_G0000037;Parent=HG03009_ch_T0000145;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:HG03009_ch_T0000145:1;Name=RPS4Y1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2466866	2466943	.	+	0	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000145;gene_id=HG03009_ch_G0000037;Parent=HG03009_ch_T0000145;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:HG03009_ch_T0000145:1;Name=RPS4Y1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2466944	2468777	.	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000145;gene_id=HG03009_ch_G0000037;Parent=HG03009_ch_T0000145;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=intron:HG03009_ch_T0000145:1;Name=RPS4Y1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2468778	2468958	.	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000145;gene_id=HG03009_ch_G0000037;Parent=HG03009_ch_T0000145;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:HG03009_ch_T0000145:2;Name=RPS4Y1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2468778	2468958	.	+	0	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000145;gene_id=HG03009_ch_G0000037;Parent=HG03009_ch_T0000145;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:HG03009_ch_T0000145:2;Name=RPS4Y1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2468959	2470346	.	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000145;gene_id=HG03009_ch_G0000037;Parent=HG03009_ch_T0000145;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=intron:HG03009_ch_T0000145:2;Name=RPS4Y1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2470347	2470444	.	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000145;gene_id=HG03009_ch_G0000037;Parent=HG03009_ch_T0000145;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:HG03009_ch_T0000145:3;Name=RPS4Y1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2470347	2470444	.	+	2	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000145;gene_id=HG03009_ch_G0000037;Parent=HG03009_ch_T0000145;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:HG03009_ch_T0000145:3;Name=RPS4Y1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2470445	2479300	.	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000145;gene_id=HG03009_ch_G0000037;Parent=HG03009_ch_T0000145;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=intron:HG03009_ch_T0000145:3;Name=RPS4Y1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2479301	2479472	.	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000145;gene_id=HG03009_ch_G0000037;Parent=HG03009_ch_T0000145;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:HG03009_ch_T0000145:4;Name=RPS4Y1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2479301	2479472	.	+	0	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000145;gene_id=HG03009_ch_G0000037;Parent=HG03009_ch_T0000145;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:HG03009_ch_T0000145:4;Name=RPS4Y1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2479473	2489788	.	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000145;gene_id=HG03009_ch_G0000037;Parent=HG03009_ch_T0000145;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=intron:HG03009_ch_T0000145:4;Name=RPS4Y1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2489789	2489946	.	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000145;gene_id=HG03009_ch_G0000037;Parent=HG03009_ch_T0000145;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:HG03009_ch_T0000145:5;Name=RPS4Y1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2489789	2489946	.	+	2	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000145;gene_id=HG03009_ch_G0000037;Parent=HG03009_ch_T0000145;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:HG03009_ch_T0000145:5;Name=RPS4Y1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2489947	2491493	.	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000145;gene_id=HG03009_ch_G0000037;Parent=HG03009_ch_T0000145;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=intron:HG03009_ch_T0000145:5;Name=RPS4Y1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2491494	2491969	.	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000145;gene_id=HG03009_ch_G0000037;Parent=HG03009_ch_T0000145;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:HG03009_ch_T0000145:6;Name=RPS4Y1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2491494	2491595	.	+	0	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000145;gene_id=HG03009_ch_G0000037;Parent=HG03009_ch_T0000145;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:HG03009_ch_T0000145:6;Name=RPS4Y1;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	2491593	2491595	.	+	0	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000145;gene_id=HG03009_ch_G0000037;Parent=HG03009_ch_T0000145;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=stop_codon:HG03009_ch_T0000145;Name=RPS4Y1;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	2466303	2491969	100	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000146;gene_id=HG03009_ch_G0000037;Parent=HG03009_ch_G0000037;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=HG03009_ch_T0000146;Name=RPS4Y1
HG03009_chrY	CAT	exon	2466303	2466674	.	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000146;gene_id=HG03009_ch_G0000037;Parent=HG03009_ch_T0000146;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:HG03009_ch_T0000146:0;Name=RPS4Y1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2466645	2466674	.	+	0	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000146;gene_id=HG03009_ch_G0000037;Parent=HG03009_ch_T0000146;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:HG03009_ch_T0000146:0;Name=RPS4Y1;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	2466645	2466647	.	+	0	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000146;gene_id=HG03009_ch_G0000037;Parent=HG03009_ch_T0000146;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=start_codon:HG03009_ch_T0000146;Name=RPS4Y1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2466675	2466865	.	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000146;gene_id=HG03009_ch_G0000037;Parent=HG03009_ch_T0000146;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=intron:HG03009_ch_T0000146:0;Name=RPS4Y1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2466866	2466943	.	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000146;gene_id=HG03009_ch_G0000037;Parent=HG03009_ch_T0000146;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:HG03009_ch_T0000146:1;Name=RPS4Y1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2466866	2466943	.	+	0	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000146;gene_id=HG03009_ch_G0000037;Parent=HG03009_ch_T0000146;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:HG03009_ch_T0000146:1;Name=RPS4Y1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2466944	2468777	.	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000146;gene_id=HG03009_ch_G0000037;Parent=HG03009_ch_T0000146;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=intron:HG03009_ch_T0000146:1;Name=RPS4Y1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2468778	2468958	.	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000146;gene_id=HG03009_ch_G0000037;Parent=HG03009_ch_T0000146;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:HG03009_ch_T0000146:2;Name=RPS4Y1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2468778	2468958	.	+	0	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000146;gene_id=HG03009_ch_G0000037;Parent=HG03009_ch_T0000146;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:HG03009_ch_T0000146:2;Name=RPS4Y1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2468959	2470346	.	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000146;gene_id=HG03009_ch_G0000037;Parent=HG03009_ch_T0000146;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=intron:HG03009_ch_T0000146:2;Name=RPS4Y1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2470347	2470444	.	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000146;gene_id=HG03009_ch_G0000037;Parent=HG03009_ch_T0000146;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:HG03009_ch_T0000146:3;Name=RPS4Y1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2470347	2470444	.	+	2	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000146;gene_id=HG03009_ch_G0000037;Parent=HG03009_ch_T0000146;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:HG03009_ch_T0000146:3;Name=RPS4Y1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2470445	2479300	.	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000146;gene_id=HG03009_ch_G0000037;Parent=HG03009_ch_T0000146;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=intron:HG03009_ch_T0000146:3;Name=RPS4Y1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2479301	2479472	.	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000146;gene_id=HG03009_ch_G0000037;Parent=HG03009_ch_T0000146;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:HG03009_ch_T0000146:4;Name=RPS4Y1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2479301	2479472	.	+	0	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000146;gene_id=HG03009_ch_G0000037;Parent=HG03009_ch_T0000146;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:HG03009_ch_T0000146:4;Name=RPS4Y1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2479473	2489788	.	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000146;gene_id=HG03009_ch_G0000037;Parent=HG03009_ch_T0000146;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=intron:HG03009_ch_T0000146:4;Name=RPS4Y1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2489789	2489946	.	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000146;gene_id=HG03009_ch_G0000037;Parent=HG03009_ch_T0000146;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:HG03009_ch_T0000146:5;Name=RPS4Y1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2489789	2489946	.	+	2	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000146;gene_id=HG03009_ch_G0000037;Parent=HG03009_ch_T0000146;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:HG03009_ch_T0000146:5;Name=RPS4Y1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2489947	2491493	.	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000146;gene_id=HG03009_ch_G0000037;Parent=HG03009_ch_T0000146;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=intron:HG03009_ch_T0000146:5;Name=RPS4Y1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2491494	2491969	.	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000146;gene_id=HG03009_ch_G0000037;Parent=HG03009_ch_T0000146;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:HG03009_ch_T0000146:6;Name=RPS4Y1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2491494	2491595	.	+	0	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000146;gene_id=HG03009_ch_G0000037;Parent=HG03009_ch_T0000146;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:HG03009_ch_T0000146:6;Name=RPS4Y1;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	2491593	2491595	.	+	0	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000146;gene_id=HG03009_ch_G0000037;Parent=HG03009_ch_T0000146;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=stop_codon:HG03009_ch_T0000146;Name=RPS4Y1;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	2560438	2607560	.	+	.	source_gene_common_name=ZFY;source_gene=hg002_chrY_paternal_49;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;gene_id=HG03009_ch_G0000038;gene_biotype=protein_coding;gene_name=ZFY;gene_sources=liftoff,augTM;ID=HG03009_ch_G0000038;Name=ZFY
HG03009_chrY	CAT	transcript	2560438	2607560	100	+	.	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000147;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_G0000038;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=HG03009_ch_T0000147;Name=ZFY
HG03009_chrY	CAT	exon	2560438	2560826	.	+	.	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000147;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000147;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03009_ch_T0000147:0;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2560827	2586125	.	+	.	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000147;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000147;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03009_ch_T0000147:0;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2586126	2586698	.	+	.	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000147;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000147;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03009_ch_T0000147:1;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2586143	2586698	.	+	0	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000147;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000147;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03009_ch_T0000147:0;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	2586143	2586145	.	+	0	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000147;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000147;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:HG03009_ch_T0000147;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2586699	2600147	.	+	.	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000147;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000147;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03009_ch_T0000147:1;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2600148	2600297	.	+	.	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000147;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000147;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03009_ch_T0000147:2;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2600148	2600297	.	+	2	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000147;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000147;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03009_ch_T0000147:1;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2600298	2600563	.	+	.	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000147;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000147;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03009_ch_T0000147:2;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2600564	2600707	.	+	.	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000147;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000147;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03009_ch_T0000147:3;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2600564	2600707	.	+	2	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000147;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000147;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03009_ch_T0000147:2;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2600708	2602993	.	+	.	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000147;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000147;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03009_ch_T0000147:3;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2602994	2603134	.	+	.	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000147;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000147;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03009_ch_T0000147:4;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2602994	2603134	.	+	2	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000147;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000147;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03009_ch_T0000147:3;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2603135	2603863	.	+	.	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000147;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000147;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03009_ch_T0000147:4;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2603864	2607560	.	+	.	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000147;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000147;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03009_ch_T0000147:5;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2603864	2605047	.	+	2	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000147;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000147;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03009_ch_T0000147:4;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	2605045	2605047	.	+	0	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000147;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000147;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:HG03009_ch_T0000147;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	2560438	2607560	100	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000148;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_G0000038;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=HG03009_ch_T0000148;Name=ZFY
HG03009_chrY	CAT	exon	2560438	2560503	.	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000148;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000148;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03009_ch_T0000148:0;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2560504	2578956	.	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000148;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000148;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03009_ch_T0000148:0;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2578957	2579045	.	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000148;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000148;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03009_ch_T0000148:1;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2578985	2579045	.	+	0	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000148;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000148;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03009_ch_T0000148:0;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	2578985	2578987	.	+	0	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000148;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000148;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:HG03009_ch_T0000148;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2579046	2600147	.	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000148;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000148;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03009_ch_T0000148:1;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2600148	2600297	.	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000148;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000148;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03009_ch_T0000148:2;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2600148	2600297	.	+	2	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000148;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000148;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03009_ch_T0000148:1;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2600298	2600563	.	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000148;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000148;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03009_ch_T0000148:2;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2600564	2600707	.	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000148;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000148;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03009_ch_T0000148:3;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2600564	2600707	.	+	2	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000148;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000148;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03009_ch_T0000148:2;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2600708	2601722	.	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000148;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000148;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03009_ch_T0000148:3;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2601723	2601875	.	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000148;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000148;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03009_ch_T0000148:4;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2601723	2601875	.	+	2	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000148;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000148;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03009_ch_T0000148:3;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2601876	2602993	.	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000148;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000148;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03009_ch_T0000148:4;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2602994	2603134	.	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000148;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000148;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03009_ch_T0000148:5;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2602994	2603134	.	+	2	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000148;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000148;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03009_ch_T0000148:4;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2603135	2603863	.	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000148;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000148;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03009_ch_T0000148:5;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2603864	2607560	.	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000148;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000148;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03009_ch_T0000148:6;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2603864	2605047	.	+	2	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000148;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000148;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03009_ch_T0000148:5;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	2605045	2605047	.	+	0	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000148;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000148;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:HG03009_ch_T0000148;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	2560438	2607560	100	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000149;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_G0000038;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=HG03009_ch_T0000149;Name=ZFY
HG03009_chrY	CAT	exon	2560438	2560503	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000149;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000149;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03009_ch_T0000149:0;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2560504	2578956	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000149;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000149;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03009_ch_T0000149:0;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2578957	2579045	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000149;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000149;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03009_ch_T0000149:1;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2578985	2579045	.	+	0	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000149;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000149;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03009_ch_T0000149:0;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	2578985	2578987	.	+	0	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000149;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000149;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:HG03009_ch_T0000149;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2579046	2586125	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000149;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000149;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03009_ch_T0000149:1;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2586126	2586698	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000149;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000149;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03009_ch_T0000149:2;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2586126	2586698	.	+	2	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000149;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000149;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03009_ch_T0000149:1;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2586699	2600147	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000149;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000149;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03009_ch_T0000149:2;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2600148	2600297	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000149;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000149;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03009_ch_T0000149:3;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2600148	2600297	.	+	2	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000149;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000149;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03009_ch_T0000149:2;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2600298	2600563	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000149;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000149;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03009_ch_T0000149:3;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2600564	2600707	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000149;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000149;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03009_ch_T0000149:4;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2600564	2600707	.	+	2	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000149;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000149;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03009_ch_T0000149:3;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2600708	2601722	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000149;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000149;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03009_ch_T0000149:4;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2601723	2601875	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000149;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000149;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03009_ch_T0000149:5;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2601723	2601875	.	+	2	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000149;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000149;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03009_ch_T0000149:4;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2601876	2602993	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000149;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000149;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03009_ch_T0000149:5;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2602994	2603134	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000149;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000149;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03009_ch_T0000149:6;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2602994	2603134	.	+	2	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000149;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000149;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03009_ch_T0000149:5;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2603135	2603863	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000149;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000149;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03009_ch_T0000149:6;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2603864	2607560	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000149;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000149;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03009_ch_T0000149:7;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2603864	2605047	.	+	2	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000149;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000149;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03009_ch_T0000149:6;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	2605045	2605047	.	+	0	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000149;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000149;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:HG03009_ch_T0000149;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	2560438	2607560	100	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000150;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_G0000038;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=HG03009_ch_T0000150;Name=ZFY
HG03009_chrY	CAT	exon	2560438	2560826	.	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000150;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000150;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03009_ch_T0000150:0;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2560827	2586125	.	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000150;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000150;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03009_ch_T0000150:0;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2586126	2586698	.	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000150;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000150;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03009_ch_T0000150:1;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2586143	2586698	.	+	0	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000150;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000150;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03009_ch_T0000150:0;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	2586143	2586145	.	+	0	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000150;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000150;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:HG03009_ch_T0000150;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2586699	2600147	.	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000150;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000150;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03009_ch_T0000150:1;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2600148	2600297	.	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000150;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000150;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03009_ch_T0000150:2;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2600148	2600297	.	+	2	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000150;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000150;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03009_ch_T0000150:1;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2600298	2600563	.	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000150;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000150;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03009_ch_T0000150:2;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2600564	2600707	.	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000150;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000150;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03009_ch_T0000150:3;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2600564	2600707	.	+	2	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000150;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000150;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03009_ch_T0000150:2;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2600708	2601722	.	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000150;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000150;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03009_ch_T0000150:3;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2601723	2601875	.	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000150;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000150;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03009_ch_T0000150:4;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2601723	2601875	.	+	2	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000150;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000150;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03009_ch_T0000150:3;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2601876	2602993	.	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000150;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000150;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03009_ch_T0000150:4;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2602994	2603134	.	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000150;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000150;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03009_ch_T0000150:5;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2602994	2603134	.	+	2	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000150;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000150;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03009_ch_T0000150:4;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2603135	2603863	.	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000150;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000150;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03009_ch_T0000150:5;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2603864	2607560	.	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000150;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000150;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03009_ch_T0000150:6;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2603864	2605047	.	+	2	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000150;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000150;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03009_ch_T0000150:5;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	2605045	2605047	.	+	0	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000150;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000150;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:HG03009_ch_T0000150;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	2560438	2607560	100	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000151;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_G0000038;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=HG03009_ch_T0000151;Name=ZFY
HG03009_chrY	CAT	exon	2560438	2560503	.	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000151;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000151;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03009_ch_T0000151:0;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2560504	2586125	.	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000151;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000151;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03009_ch_T0000151:0;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2586126	2586698	.	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000151;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000151;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03009_ch_T0000151:1;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2586143	2586698	.	+	0	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000151;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000151;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03009_ch_T0000151:0;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	2586143	2586145	.	+	0	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000151;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000151;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:HG03009_ch_T0000151;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2586699	2600147	.	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000151;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000151;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03009_ch_T0000151:1;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2600148	2600297	.	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000151;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000151;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03009_ch_T0000151:2;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2600148	2600297	.	+	2	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000151;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000151;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03009_ch_T0000151:1;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2600298	2600563	.	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000151;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000151;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03009_ch_T0000151:2;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2600564	2600707	.	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000151;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000151;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03009_ch_T0000151:3;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2600564	2600707	.	+	2	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000151;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000151;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03009_ch_T0000151:2;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2600708	2601722	.	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000151;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000151;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03009_ch_T0000151:3;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2601723	2601875	.	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000151;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000151;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03009_ch_T0000151:4;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2601723	2601875	.	+	2	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000151;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000151;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03009_ch_T0000151:3;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2601876	2602993	.	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000151;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000151;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03009_ch_T0000151:4;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2602994	2603134	.	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000151;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000151;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03009_ch_T0000151:5;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2602994	2603134	.	+	2	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000151;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000151;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03009_ch_T0000151:4;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2603135	2603863	.	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000151;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000151;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03009_ch_T0000151:5;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2603864	2607560	.	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000151;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000151;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03009_ch_T0000151:6;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2603864	2605047	.	+	2	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000151;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000151;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03009_ch_T0000151:5;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	2605045	2605047	.	+	0	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000151;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000151;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:HG03009_ch_T0000151;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	2560438	2607560	100	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000152;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_G0000038;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=HG03009_ch_T0000152;Name=ZFY
HG03009_chrY	CAT	exon	2560438	2560692	.	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000152;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000152;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03009_ch_T0000152:0;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2560693	2586125	.	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000152;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000152;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03009_ch_T0000152:0;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2586126	2586698	.	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000152;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000152;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03009_ch_T0000152:1;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2586143	2586698	.	+	0	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000152;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000152;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03009_ch_T0000152:0;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	2586143	2586145	.	+	0	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000152;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000152;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:HG03009_ch_T0000152;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2586699	2600147	.	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000152;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000152;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03009_ch_T0000152:1;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2600148	2600297	.	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000152;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000152;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03009_ch_T0000152:2;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2600148	2600297	.	+	2	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000152;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000152;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03009_ch_T0000152:1;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2600298	2600563	.	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000152;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000152;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03009_ch_T0000152:2;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2600564	2600707	.	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000152;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000152;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03009_ch_T0000152:3;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2600564	2600707	.	+	2	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000152;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000152;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03009_ch_T0000152:2;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2600708	2601722	.	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000152;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000152;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03009_ch_T0000152:3;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2601723	2601875	.	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000152;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000152;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03009_ch_T0000152:4;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2601723	2601875	.	+	2	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000152;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000152;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03009_ch_T0000152:3;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2601876	2602993	.	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000152;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000152;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03009_ch_T0000152:4;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2602994	2603134	.	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000152;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000152;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03009_ch_T0000152:5;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2602994	2603134	.	+	2	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000152;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000152;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03009_ch_T0000152:4;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2603135	2603863	.	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000152;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000152;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03009_ch_T0000152:5;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2603864	2607560	.	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000152;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000152;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03009_ch_T0000152:6;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2603864	2605047	.	+	2	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000152;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000152;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03009_ch_T0000152:5;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	2605045	2605047	.	+	0	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000152;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000152;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:HG03009_ch_T0000152;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	2560438	2607560	100	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000153;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_G0000038;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=HG03009_ch_T0000153;Name=ZFY
HG03009_chrY	CAT	exon	2560438	2560826	.	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000153;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000153;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03009_ch_T0000153:0;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2560827	2578956	.	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000153;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000153;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03009_ch_T0000153:0;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2578957	2579045	.	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000153;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000153;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03009_ch_T0000153:1;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2578985	2579045	.	+	0	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000153;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000153;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03009_ch_T0000153:0;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	2578985	2578987	.	+	0	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000153;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000153;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:HG03009_ch_T0000153;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2579046	2586125	.	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000153;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000153;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03009_ch_T0000153:1;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2586126	2586698	.	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000153;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000153;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03009_ch_T0000153:2;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2586126	2586698	.	+	2	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000153;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000153;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03009_ch_T0000153:1;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2586699	2600147	.	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000153;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000153;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03009_ch_T0000153:2;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2600148	2600297	.	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000153;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000153;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03009_ch_T0000153:3;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2600148	2600297	.	+	2	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000153;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000153;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03009_ch_T0000153:2;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2600298	2600563	.	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000153;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000153;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03009_ch_T0000153:3;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2600564	2600707	.	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000153;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000153;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03009_ch_T0000153:4;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2600564	2600707	.	+	2	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000153;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000153;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03009_ch_T0000153:3;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2600708	2602993	.	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000153;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000153;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03009_ch_T0000153:4;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2602994	2603134	.	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000153;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000153;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03009_ch_T0000153:5;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2602994	2603134	.	+	2	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000153;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000153;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03009_ch_T0000153:4;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2603135	2603863	.	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000153;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000153;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03009_ch_T0000153:5;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2603864	2607560	.	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000153;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000153;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03009_ch_T0000153:6;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2603864	2605047	.	+	2	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000153;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000153;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03009_ch_T0000153:5;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	2605045	2605047	.	+	0	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000153;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000153;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:HG03009_ch_T0000153;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	2560438	2607560	100	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000154;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_G0000038;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=HG03009_ch_T0000154;Name=ZFY
HG03009_chrY	CAT	exon	2560438	2560503	.	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000154;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000154;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03009_ch_T0000154:0;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2560504	2578956	.	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000154;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000154;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03009_ch_T0000154:0;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2578957	2579045	.	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000154;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000154;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03009_ch_T0000154:1;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2578985	2579045	.	+	0	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000154;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000154;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03009_ch_T0000154:0;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	2578985	2578987	.	+	0	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000154;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000154;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:HG03009_ch_T0000154;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2579046	2586125	.	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000154;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000154;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03009_ch_T0000154:1;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2586126	2586698	.	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000154;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000154;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03009_ch_T0000154:2;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2586126	2586698	.	+	2	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000154;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000154;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03009_ch_T0000154:1;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2586699	2600147	.	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000154;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000154;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03009_ch_T0000154:2;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2600148	2600297	.	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000154;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000154;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03009_ch_T0000154:3;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2600148	2600297	.	+	2	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000154;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000154;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03009_ch_T0000154:2;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2600298	2600563	.	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000154;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000154;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03009_ch_T0000154:3;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2600564	2600707	.	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000154;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000154;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03009_ch_T0000154:4;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2600564	2600707	.	+	2	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000154;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000154;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03009_ch_T0000154:3;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2600708	2602993	.	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000154;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000154;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03009_ch_T0000154:4;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2602994	2603134	.	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000154;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000154;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03009_ch_T0000154:5;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2602994	2603134	.	+	2	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000154;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000154;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03009_ch_T0000154:4;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2603135	2603863	.	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000154;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000154;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03009_ch_T0000154:5;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2603864	2607560	.	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000154;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000154;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03009_ch_T0000154:6;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2603864	2605047	.	+	2	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000154;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000154;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03009_ch_T0000154:5;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	2605045	2605047	.	+	0	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000154;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000154;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:HG03009_ch_T0000154;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	2560438	2607560	100	+	.	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000155;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_G0000038;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=HG03009_ch_T0000155;Name=ZFY
HG03009_chrY	CAT	exon	2560438	2560503	.	+	.	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000155;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000155;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03009_ch_T0000155:0;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2560504	2586125	.	+	.	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000155;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000155;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03009_ch_T0000155:0;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2586126	2586698	.	+	.	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000155;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000155;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03009_ch_T0000155:1;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2586143	2586698	.	+	0	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000155;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000155;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03009_ch_T0000155:0;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	2586143	2586145	.	+	0	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000155;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000155;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:HG03009_ch_T0000155;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2586699	2600147	.	+	.	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000155;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000155;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03009_ch_T0000155:1;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2600148	2600297	.	+	.	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000155;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000155;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03009_ch_T0000155:2;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2600148	2600297	.	+	2	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000155;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000155;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03009_ch_T0000155:1;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2600298	2600563	.	+	.	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000155;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000155;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03009_ch_T0000155:2;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2600564	2600707	.	+	.	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000155;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000155;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03009_ch_T0000155:3;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2600564	2600707	.	+	2	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000155;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000155;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03009_ch_T0000155:2;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2600708	2602993	.	+	.	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000155;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000155;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03009_ch_T0000155:3;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2602994	2603134	.	+	.	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000155;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000155;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03009_ch_T0000155:4;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2602994	2603134	.	+	2	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000155;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000155;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03009_ch_T0000155:3;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2603135	2603863	.	+	.	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000155;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000155;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03009_ch_T0000155:4;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2603864	2607560	.	+	.	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000155;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000155;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03009_ch_T0000155:5;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2603864	2605047	.	+	2	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000155;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000155;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03009_ch_T0000155:4;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	2605045	2605047	.	+	0	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000155;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000155;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:HG03009_ch_T0000155;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	2560438	2607560	100	+	.	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000156;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_G0000038;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=HG03009_ch_T0000156;Name=ZFY
HG03009_chrY	CAT	exon	2560438	2560503	.	+	.	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000156;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000156;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03009_ch_T0000156:0;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2560504	2578956	.	+	.	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000156;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000156;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03009_ch_T0000156:0;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2578957	2579045	.	+	.	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000156;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000156;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03009_ch_T0000156:1;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2578985	2579045	.	+	0	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000156;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000156;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03009_ch_T0000156:0;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	2578985	2578987	.	+	0	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000156;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000156;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:HG03009_ch_T0000156;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2579046	2600147	.	+	.	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000156;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000156;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03009_ch_T0000156:1;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2600148	2600297	.	+	.	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000156;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000156;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03009_ch_T0000156:2;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2600148	2600297	.	+	2	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000156;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000156;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03009_ch_T0000156:1;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2600298	2600563	.	+	.	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000156;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000156;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03009_ch_T0000156:2;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2600564	2600707	.	+	.	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000156;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000156;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03009_ch_T0000156:3;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2600564	2600707	.	+	2	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000156;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000156;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03009_ch_T0000156:2;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2600708	2602993	.	+	.	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000156;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000156;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03009_ch_T0000156:3;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2602994	2603134	.	+	.	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000156;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000156;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03009_ch_T0000156:4;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2602994	2603134	.	+	2	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000156;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000156;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03009_ch_T0000156:3;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2603135	2603863	.	+	.	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000156;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000156;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03009_ch_T0000156:4;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2603864	2607560	.	+	.	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000156;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000156;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03009_ch_T0000156:5;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2603864	2605047	.	+	2	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000156;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000156;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03009_ch_T0000156:4;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	2605045	2605047	.	+	0	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000156;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000156;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:HG03009_ch_T0000156;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	2560438	2607560	100	+	.	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000157;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_G0000038;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=HG03009_ch_T0000157;Name=ZFY
HG03009_chrY	CAT	exon	2560438	2560826	.	+	.	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000157;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000157;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03009_ch_T0000157:0;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2560827	2600147	.	+	.	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000157;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000157;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03009_ch_T0000157:0;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2600148	2600297	.	+	.	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000157;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000157;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03009_ch_T0000157:1;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2600213	2600297	.	+	0	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000157;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000157;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03009_ch_T0000157:0;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	2600213	2600215	.	+	0	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000157;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000157;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:HG03009_ch_T0000157;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2600298	2600563	.	+	.	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000157;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000157;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03009_ch_T0000157:1;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2600564	2600707	.	+	.	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000157;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000157;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03009_ch_T0000157:2;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2600564	2600707	.	+	2	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000157;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000157;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03009_ch_T0000157:1;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2600708	2602993	.	+	.	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000157;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000157;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03009_ch_T0000157:2;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2602994	2603134	.	+	.	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000157;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000157;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03009_ch_T0000157:3;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2602994	2603134	.	+	2	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000157;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000157;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03009_ch_T0000157:2;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2603135	2603863	.	+	.	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000157;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000157;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03009_ch_T0000157:3;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2603864	2607560	.	+	.	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000157;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000157;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03009_ch_T0000157:4;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2603864	2605047	.	+	2	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000157;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000157;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03009_ch_T0000157:3;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	2605045	2605047	.	+	0	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000157;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000157;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:HG03009_ch_T0000157;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	2560438	2607560	100	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000158;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_G0000038;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=HG03009_ch_T0000158;Name=ZFY
HG03009_chrY	CAT	exon	2560438	2560826	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000158;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000158;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03009_ch_T0000158:0;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2560827	2578956	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000158;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000158;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03009_ch_T0000158:0;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2578957	2579045	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000158;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000158;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03009_ch_T0000158:1;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2578985	2579045	.	+	0	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000158;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000158;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03009_ch_T0000158:0;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	2578985	2578987	.	+	0	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000158;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000158;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:HG03009_ch_T0000158;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2579046	2586125	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000158;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000158;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03009_ch_T0000158:1;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2586126	2586698	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000158;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000158;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03009_ch_T0000158:2;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2586126	2586698	.	+	2	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000158;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000158;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03009_ch_T0000158:1;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2586699	2600147	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000158;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000158;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03009_ch_T0000158:2;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2600148	2600297	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000158;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000158;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03009_ch_T0000158:3;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2600148	2600297	.	+	2	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000158;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000158;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03009_ch_T0000158:2;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2600298	2600563	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000158;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000158;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03009_ch_T0000158:3;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2600564	2600707	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000158;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000158;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03009_ch_T0000158:4;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2600564	2600707	.	+	2	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000158;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000158;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03009_ch_T0000158:3;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2600708	2601722	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000158;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000158;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03009_ch_T0000158:4;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2601723	2601875	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000158;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000158;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03009_ch_T0000158:5;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2601723	2601875	.	+	2	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000158;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000158;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03009_ch_T0000158:4;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2601876	2602993	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000158;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000158;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03009_ch_T0000158:5;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2602994	2603134	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000158;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000158;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03009_ch_T0000158:6;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2602994	2603134	.	+	2	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000158;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000158;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03009_ch_T0000158:5;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2603135	2603863	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000158;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000158;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03009_ch_T0000158:6;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2603864	2607560	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000158;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000158;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03009_ch_T0000158:7;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2603864	2605047	.	+	2	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000158;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000158;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03009_ch_T0000158:6;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	2605045	2605047	.	+	0	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000158;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000158;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:HG03009_ch_T0000158;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	2560438	2607560	100	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000159;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_G0000038;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=HG03009_ch_T0000159;Name=ZFY
HG03009_chrY	CAT	exon	2560438	2560692	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000159;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000159;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03009_ch_T0000159:0;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2560693	2578956	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000159;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000159;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03009_ch_T0000159:0;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2578957	2579045	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000159;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000159;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03009_ch_T0000159:1;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2578985	2579045	.	+	0	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000159;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000159;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03009_ch_T0000159:0;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	2578985	2578987	.	+	0	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000159;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000159;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:HG03009_ch_T0000159;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2579046	2586125	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000159;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000159;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03009_ch_T0000159:1;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2586126	2586698	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000159;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000159;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03009_ch_T0000159:2;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2586126	2586698	.	+	2	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000159;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000159;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03009_ch_T0000159:1;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2586699	2600147	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000159;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000159;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03009_ch_T0000159:2;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2600148	2600297	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000159;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000159;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03009_ch_T0000159:3;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2600148	2600297	.	+	2	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000159;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000159;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03009_ch_T0000159:2;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2600298	2600563	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000159;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000159;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03009_ch_T0000159:3;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2600564	2600707	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000159;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000159;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03009_ch_T0000159:4;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2600564	2600707	.	+	2	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000159;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000159;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03009_ch_T0000159:3;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2600708	2601722	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000159;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000159;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03009_ch_T0000159:4;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2601723	2601875	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000159;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000159;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03009_ch_T0000159:5;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2601723	2601875	.	+	2	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000159;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000159;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03009_ch_T0000159:4;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2601876	2602993	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000159;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000159;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03009_ch_T0000159:5;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2602994	2603134	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000159;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000159;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03009_ch_T0000159:6;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2602994	2603134	.	+	2	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000159;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000159;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03009_ch_T0000159:5;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2603135	2603863	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000159;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000159;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03009_ch_T0000159:6;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2603864	2607560	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000159;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000159;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03009_ch_T0000159:7;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2603864	2605047	.	+	2	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000159;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000159;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03009_ch_T0000159:6;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	2605045	2605047	.	+	0	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000159;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000159;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:HG03009_ch_T0000159;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	2571231	2607560	100	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000160;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_G0000038;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=HG03009_ch_T0000160;Name=ZFY
HG03009_chrY	CAT	exon	2571231	2571328	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000160;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000160;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03009_ch_T0000160:0;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2571329	2578956	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000160;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000160;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03009_ch_T0000160:0;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2578957	2579045	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000160;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000160;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03009_ch_T0000160:1;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2578985	2579045	.	+	0	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000160;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000160;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03009_ch_T0000160:0;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	2578985	2578987	.	+	0	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000160;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000160;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:HG03009_ch_T0000160;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2579046	2586125	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000160;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000160;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03009_ch_T0000160:1;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2586126	2586698	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000160;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000160;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03009_ch_T0000160:2;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2586126	2586698	.	+	2	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000160;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000160;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03009_ch_T0000160:1;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2586699	2600147	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000160;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000160;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03009_ch_T0000160:2;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2600148	2600297	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000160;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000160;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03009_ch_T0000160:3;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2600148	2600297	.	+	2	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000160;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000160;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03009_ch_T0000160:2;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2600298	2600563	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000160;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000160;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03009_ch_T0000160:3;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2600564	2600707	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000160;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000160;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03009_ch_T0000160:4;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2600564	2600707	.	+	2	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000160;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000160;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03009_ch_T0000160:3;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2600708	2601722	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000160;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000160;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03009_ch_T0000160:4;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2601723	2601875	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000160;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000160;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03009_ch_T0000160:5;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2601723	2601875	.	+	2	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000160;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000160;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03009_ch_T0000160:4;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2601876	2602993	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000160;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000160;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03009_ch_T0000160:5;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2602994	2603134	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000160;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000160;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03009_ch_T0000160:6;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2602994	2603134	.	+	2	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000160;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000160;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03009_ch_T0000160:5;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2603135	2603863	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000160;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000160;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03009_ch_T0000160:6;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2603864	2607560	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000160;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000160;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03009_ch_T0000160:7;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	2603864	2605047	.	+	2	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000160;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000160;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03009_ch_T0000160:6;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	2605045	2605047	.	+	0	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000160;gene_id=HG03009_ch_G0000038;Parent=HG03009_ch_T0000160;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:HG03009_ch_T0000160;Name=ZFY;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	2591872	2627648	.	-	.	source_gene_common_name=ZFY-AS1;source_gene=hg002_chrY_paternal_50;alternative_source_transcripts=hg002_chrY_paternal_50.1,hg002_chrY_paternal_50.1;gene_id=HG03009_ch_G0000039;gene_biotype=lncRNA;gene_name=ZFY-AS1;gene_sources=liftoff;ID=HG03009_ch_G0000039;Name=ZFY-AS1
HG03009_chrY	CAT	transcript	2591872	2627648	1000	-	.	source_transcript=hg002_chrY_paternal_50.1;source_transcript_name=hg002_chrY_paternal_50.1;source_gene=hg002_chrY_paternal_50;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_50;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_50.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_50.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=hg002_chrY_paternal_50.1,hg002_chrY_paternal_50.1;transcript_id=HG03009_ch_T0000161;gene_id=HG03009_ch_G0000039;Parent=HG03009_ch_G0000039;transcript_name=hg002_chrY_paternal_50.1;gene_name=ZFY-AS1;ID=HG03009_ch_T0000161;Name=ZFY-AS1
HG03009_chrY	CAT	exon	2591872	2591992	.	-	.	source_transcript=hg002_chrY_paternal_50.1;source_transcript_name=hg002_chrY_paternal_50.1;source_gene=hg002_chrY_paternal_50;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_50;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_50.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_50.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=hg002_chrY_paternal_50.1,hg002_chrY_paternal_50.1;transcript_id=HG03009_ch_T0000161;gene_id=HG03009_ch_G0000039;Parent=HG03009_ch_T0000161;transcript_name=hg002_chrY_paternal_50.1;gene_name=ZFY-AS1;ID=exon:HG03009_ch_T0000161:0;Name=ZFY-AS1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2591993	2606891	.	-	.	source_transcript=hg002_chrY_paternal_50.1;source_transcript_name=hg002_chrY_paternal_50.1;source_gene=hg002_chrY_paternal_50;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_50;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_50.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_50.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=hg002_chrY_paternal_50.1,hg002_chrY_paternal_50.1;transcript_id=HG03009_ch_T0000161;gene_id=HG03009_ch_G0000039;Parent=HG03009_ch_T0000161;transcript_name=hg002_chrY_paternal_50.1;gene_name=ZFY-AS1;ID=intron:HG03009_ch_T0000161:0;Name=ZFY-AS1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2606892	2606981	.	-	.	source_transcript=hg002_chrY_paternal_50.1;source_transcript_name=hg002_chrY_paternal_50.1;source_gene=hg002_chrY_paternal_50;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_50;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_50.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_50.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=hg002_chrY_paternal_50.1,hg002_chrY_paternal_50.1;transcript_id=HG03009_ch_T0000161;gene_id=HG03009_ch_G0000039;Parent=HG03009_ch_T0000161;transcript_name=hg002_chrY_paternal_50.1;gene_name=ZFY-AS1;ID=exon:HG03009_ch_T0000161:1;Name=ZFY-AS1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2606982	2627334	.	-	.	source_transcript=hg002_chrY_paternal_50.1;source_transcript_name=hg002_chrY_paternal_50.1;source_gene=hg002_chrY_paternal_50;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_50;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_50.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_50.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=hg002_chrY_paternal_50.1,hg002_chrY_paternal_50.1;transcript_id=HG03009_ch_T0000161;gene_id=HG03009_ch_G0000039;Parent=HG03009_ch_T0000161;transcript_name=hg002_chrY_paternal_50.1;gene_name=ZFY-AS1;ID=intron:HG03009_ch_T0000161:1;Name=ZFY-AS1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2627335	2627648	.	-	.	source_transcript=hg002_chrY_paternal_50.1;source_transcript_name=hg002_chrY_paternal_50.1;source_gene=hg002_chrY_paternal_50;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_50;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_50.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_50.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=hg002_chrY_paternal_50.1,hg002_chrY_paternal_50.1;transcript_id=HG03009_ch_T0000161;gene_id=HG03009_ch_G0000039;Parent=HG03009_ch_T0000161;transcript_name=hg002_chrY_paternal_50.1;gene_name=ZFY-AS1;ID=exon:HG03009_ch_T0000161:2;Name=ZFY-AS1;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	2628018	2727196	.	+	.	source_gene_common_name=LINC00278;source_gene=hg002_chrY_paternal_52;alternative_source_transcripts=hg002_chrY_paternal_52.1,hg002_chrY_paternal_52.1;gene_id=HG03009_ch_G0000040;gene_biotype=lncRNA;gene_name=LINC00278;gene_sources=liftoff;ID=HG03009_ch_G0000040;Name=LINC00278
HG03009_chrY	CAT	transcript	2628018	2727196	1000	+	.	source_transcript=hg002_chrY_paternal_52.1;source_transcript_name=hg002_chrY_paternal_52.1;source_gene=hg002_chrY_paternal_52;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_52;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_52.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_52.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=hg002_chrY_paternal_52.1,hg002_chrY_paternal_52.1;transcript_id=HG03009_ch_T0000162;gene_id=HG03009_ch_G0000040;Parent=HG03009_ch_G0000040;transcript_name=hg002_chrY_paternal_52.1;gene_name=LINC00278;ID=HG03009_ch_T0000162;Name=LINC00278
HG03009_chrY	CAT	exon	2628018	2628239	.	+	.	source_transcript=hg002_chrY_paternal_52.1;source_transcript_name=hg002_chrY_paternal_52.1;source_gene=hg002_chrY_paternal_52;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_52;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_52.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_52.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=hg002_chrY_paternal_52.1,hg002_chrY_paternal_52.1;transcript_id=HG03009_ch_T0000162;gene_id=HG03009_ch_G0000040;Parent=HG03009_ch_T0000162;transcript_name=hg002_chrY_paternal_52.1;gene_name=LINC00278;ID=exon:HG03009_ch_T0000162:0;Name=LINC00278;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2628240	2704207	.	+	.	source_transcript=hg002_chrY_paternal_52.1;source_transcript_name=hg002_chrY_paternal_52.1;source_gene=hg002_chrY_paternal_52;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_52;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_52.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_52.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=hg002_chrY_paternal_52.1,hg002_chrY_paternal_52.1;transcript_id=HG03009_ch_T0000162;gene_id=HG03009_ch_G0000040;Parent=HG03009_ch_T0000162;transcript_name=hg002_chrY_paternal_52.1;gene_name=LINC00278;ID=intron:HG03009_ch_T0000162:0;Name=LINC00278;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2704208	2704265	.	+	.	source_transcript=hg002_chrY_paternal_52.1;source_transcript_name=hg002_chrY_paternal_52.1;source_gene=hg002_chrY_paternal_52;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_52;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_52.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_52.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=hg002_chrY_paternal_52.1,hg002_chrY_paternal_52.1;transcript_id=HG03009_ch_T0000162;gene_id=HG03009_ch_G0000040;Parent=HG03009_ch_T0000162;transcript_name=hg002_chrY_paternal_52.1;gene_name=LINC00278;ID=exon:HG03009_ch_T0000162:1;Name=LINC00278;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2704266	2721918	.	+	.	source_transcript=hg002_chrY_paternal_52.1;source_transcript_name=hg002_chrY_paternal_52.1;source_gene=hg002_chrY_paternal_52;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_52;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_52.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_52.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=hg002_chrY_paternal_52.1,hg002_chrY_paternal_52.1;transcript_id=HG03009_ch_T0000162;gene_id=HG03009_ch_G0000040;Parent=HG03009_ch_T0000162;transcript_name=hg002_chrY_paternal_52.1;gene_name=LINC00278;ID=intron:HG03009_ch_T0000162:1;Name=LINC00278;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2721919	2721980	.	+	.	source_transcript=hg002_chrY_paternal_52.1;source_transcript_name=hg002_chrY_paternal_52.1;source_gene=hg002_chrY_paternal_52;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_52;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_52.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_52.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=hg002_chrY_paternal_52.1,hg002_chrY_paternal_52.1;transcript_id=HG03009_ch_T0000162;gene_id=HG03009_ch_G0000040;Parent=HG03009_ch_T0000162;transcript_name=hg002_chrY_paternal_52.1;gene_name=LINC00278;ID=exon:HG03009_ch_T0000162:2;Name=LINC00278;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	2721981	2727008	.	+	.	source_transcript=hg002_chrY_paternal_52.1;source_transcript_name=hg002_chrY_paternal_52.1;source_gene=hg002_chrY_paternal_52;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_52;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_52.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_52.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=hg002_chrY_paternal_52.1,hg002_chrY_paternal_52.1;transcript_id=HG03009_ch_T0000162;gene_id=HG03009_ch_G0000040;Parent=HG03009_ch_T0000162;transcript_name=hg002_chrY_paternal_52.1;gene_name=LINC00278;ID=intron:HG03009_ch_T0000162:2;Name=LINC00278;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	2727009	2727196	.	+	.	source_transcript=hg002_chrY_paternal_52.1;source_transcript_name=hg002_chrY_paternal_52.1;source_gene=hg002_chrY_paternal_52;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_52;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_52.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_52.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=hg002_chrY_paternal_52.1,hg002_chrY_paternal_52.1;transcript_id=HG03009_ch_T0000162;gene_id=HG03009_ch_G0000040;Parent=HG03009_ch_T0000162;transcript_name=hg002_chrY_paternal_52.1;gene_name=LINC00278;ID=exon:HG03009_ch_T0000162:3;Name=LINC00278;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	3204027	3205001	.	+	.	source_gene_common_name=TGIF2LY;source_gene=hg002_chrY_paternal_55;alternative_source_transcripts=hg002_chrY_paternal_55.1,hg002_chrY_paternal_55.1;gene_id=HG03009_ch_G0000041;gene_biotype=protein_coding;gene_name=TGIF2LY;gene_sources=liftoff,augTM;ID=HG03009_ch_G0000041;Name=TGIF2LY
HG03009_chrY	CAT	transcript	3204027	3205001	100	+	.	source_transcript=hg002_chrY_paternal_55.1;source_transcript_name=hg002_chrY_paternal_55.1;source_gene=hg002_chrY_paternal_55;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_55;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_55.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_55.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=hg002_chrY_paternal_55.1,hg002_chrY_paternal_55.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000163;gene_id=HG03009_ch_G0000041;Parent=HG03009_ch_G0000041;transcript_name=hg002_chrY_paternal_55.1;gene_name=TGIF2LY;ID=HG03009_ch_T0000163;Name=TGIF2LY
HG03009_chrY	CAT	exon	3204027	3204087	.	+	.	source_transcript=hg002_chrY_paternal_55.1;source_transcript_name=hg002_chrY_paternal_55.1;source_gene=hg002_chrY_paternal_55;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_55;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_55.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_55.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=hg002_chrY_paternal_55.1,hg002_chrY_paternal_55.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000163;gene_id=HG03009_ch_G0000041;Parent=HG03009_ch_T0000163;transcript_name=hg002_chrY_paternal_55.1;gene_name=TGIF2LY;ID=exon:HG03009_ch_T0000163:0;Name=TGIF2LY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	3204088	3204183	.	+	.	source_transcript=hg002_chrY_paternal_55.1;source_transcript_name=hg002_chrY_paternal_55.1;source_gene=hg002_chrY_paternal_55;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_55;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_55.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_55.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=hg002_chrY_paternal_55.1,hg002_chrY_paternal_55.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000163;gene_id=HG03009_ch_G0000041;Parent=HG03009_ch_T0000163;transcript_name=hg002_chrY_paternal_55.1;gene_name=TGIF2LY;ID=intron:HG03009_ch_T0000163:0;Name=TGIF2LY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	3204184	3205001	.	+	.	source_transcript=hg002_chrY_paternal_55.1;source_transcript_name=hg002_chrY_paternal_55.1;source_gene=hg002_chrY_paternal_55;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_55;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_55.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_55.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=hg002_chrY_paternal_55.1,hg002_chrY_paternal_55.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000163;gene_id=HG03009_ch_G0000041;Parent=HG03009_ch_T0000163;transcript_name=hg002_chrY_paternal_55.1;gene_name=TGIF2LY;ID=exon:HG03009_ch_T0000163:1;Name=TGIF2LY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	3204205	3204762	.	+	0	source_transcript=hg002_chrY_paternal_55.1;source_transcript_name=hg002_chrY_paternal_55.1;source_gene=hg002_chrY_paternal_55;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_55;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_55.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_55.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=hg002_chrY_paternal_55.1,hg002_chrY_paternal_55.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000163;gene_id=HG03009_ch_G0000041;Parent=HG03009_ch_T0000163;transcript_name=hg002_chrY_paternal_55.1;gene_name=TGIF2LY;ID=CDS:HG03009_ch_T0000163:0;Name=TGIF2LY;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	3204205	3204207	.	+	0	source_transcript=hg002_chrY_paternal_55.1;source_transcript_name=hg002_chrY_paternal_55.1;source_gene=hg002_chrY_paternal_55;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_55;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_55.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_55.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=hg002_chrY_paternal_55.1,hg002_chrY_paternal_55.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000163;gene_id=HG03009_ch_G0000041;Parent=HG03009_ch_T0000163;transcript_name=hg002_chrY_paternal_55.1;gene_name=TGIF2LY;ID=start_codon:HG03009_ch_T0000163;Name=TGIF2LY;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	3204760	3204762	.	+	0	source_transcript=hg002_chrY_paternal_55.1;source_transcript_name=hg002_chrY_paternal_55.1;source_gene=hg002_chrY_paternal_55;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_55;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_55.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_55.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=hg002_chrY_paternal_55.1,hg002_chrY_paternal_55.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000163;gene_id=HG03009_ch_G0000041;Parent=HG03009_ch_T0000163;transcript_name=hg002_chrY_paternal_55.1;gene_name=TGIF2LY;ID=stop_codon:HG03009_ch_T0000163;Name=TGIF2LY;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	3425639	3460542	.	+	.	source_gene_common_name=LOC105377227;source_gene=hg002_chrY_paternal_58;alternative_source_transcripts=hg002_chrY_paternal_58.1,hg002_chrY_paternal_58.1;gene_id=HG03009_ch_G0000042;gene_biotype=lncRNA;gene_name=LOC105377227;gene_sources=liftoff;ID=HG03009_ch_G0000042;Name=LOC105377227
HG03009_chrY	CAT	transcript	3425639	3436646	1000	+	.	source_transcript=hg002_chrY_paternal_58.1;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.1,hg002_chrY_paternal_58.1;transcript_id=HG03009_ch_T0000164;gene_id=HG03009_ch_G0000042;Parent=HG03009_ch_G0000042;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=HG03009_ch_T0000164;Name=LOC105377227
HG03009_chrY	CAT	exon	3425639	3428940	.	+	.	source_transcript=hg002_chrY_paternal_58.1;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.1,hg002_chrY_paternal_58.1;transcript_id=HG03009_ch_T0000164;gene_id=HG03009_ch_G0000042;Parent=HG03009_ch_T0000164;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=exon:HG03009_ch_T0000164:0;Name=LOC105377227;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	3428941	3429372	.	+	.	source_transcript=hg002_chrY_paternal_58.1;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.1,hg002_chrY_paternal_58.1;transcript_id=HG03009_ch_T0000164;gene_id=HG03009_ch_G0000042;Parent=HG03009_ch_T0000164;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=intron:HG03009_ch_T0000164:0;Name=LOC105377227;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	3429373	3429484	.	+	.	source_transcript=hg002_chrY_paternal_58.1;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.1,hg002_chrY_paternal_58.1;transcript_id=HG03009_ch_T0000164;gene_id=HG03009_ch_G0000042;Parent=HG03009_ch_T0000164;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=exon:HG03009_ch_T0000164:1;Name=LOC105377227;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	3429485	3434556	.	+	.	source_transcript=hg002_chrY_paternal_58.1;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.1,hg002_chrY_paternal_58.1;transcript_id=HG03009_ch_T0000164;gene_id=HG03009_ch_G0000042;Parent=HG03009_ch_T0000164;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=intron:HG03009_ch_T0000164:1;Name=LOC105377227;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	3434557	3436646	.	+	.	source_transcript=hg002_chrY_paternal_58.1;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.1,hg002_chrY_paternal_58.1;transcript_id=HG03009_ch_T0000164;gene_id=HG03009_ch_G0000042;Parent=HG03009_ch_T0000164;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=exon:HG03009_ch_T0000164:2;Name=LOC105377227;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	3425639	3458020	1000	+	.	source_transcript=hg002_chrY_paternal_58.2;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.2,hg002_chrY_paternal_58.2;transcript_id=HG03009_ch_T0000165;gene_id=HG03009_ch_G0000042;Parent=HG03009_ch_G0000042;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=HG03009_ch_T0000165;Name=LOC105377227
HG03009_chrY	CAT	exon	3425639	3428940	.	+	.	source_transcript=hg002_chrY_paternal_58.2;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.2,hg002_chrY_paternal_58.2;transcript_id=HG03009_ch_T0000165;gene_id=HG03009_ch_G0000042;Parent=HG03009_ch_T0000165;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=exon:HG03009_ch_T0000165:0;Name=LOC105377227;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	3428941	3429372	.	+	.	source_transcript=hg002_chrY_paternal_58.2;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.2,hg002_chrY_paternal_58.2;transcript_id=HG03009_ch_T0000165;gene_id=HG03009_ch_G0000042;Parent=HG03009_ch_T0000165;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=intron:HG03009_ch_T0000165:0;Name=LOC105377227;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	3429373	3429484	.	+	.	source_transcript=hg002_chrY_paternal_58.2;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.2,hg002_chrY_paternal_58.2;transcript_id=HG03009_ch_T0000165;gene_id=HG03009_ch_G0000042;Parent=HG03009_ch_T0000165;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=exon:HG03009_ch_T0000165:1;Name=LOC105377227;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	3429485	3434556	.	+	.	source_transcript=hg002_chrY_paternal_58.2;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.2,hg002_chrY_paternal_58.2;transcript_id=HG03009_ch_T0000165;gene_id=HG03009_ch_G0000042;Parent=HG03009_ch_T0000165;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=intron:HG03009_ch_T0000165:1;Name=LOC105377227;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	3434557	3434731	.	+	.	source_transcript=hg002_chrY_paternal_58.2;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.2,hg002_chrY_paternal_58.2;transcript_id=HG03009_ch_T0000165;gene_id=HG03009_ch_G0000042;Parent=HG03009_ch_T0000165;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=exon:HG03009_ch_T0000165:2;Name=LOC105377227;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	3434732	3457390	.	+	.	source_transcript=hg002_chrY_paternal_58.2;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.2,hg002_chrY_paternal_58.2;transcript_id=HG03009_ch_T0000165;gene_id=HG03009_ch_G0000042;Parent=HG03009_ch_T0000165;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=intron:HG03009_ch_T0000165:2;Name=LOC105377227;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	3457391	3458020	.	+	.	source_transcript=hg002_chrY_paternal_58.2;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.2,hg002_chrY_paternal_58.2;transcript_id=HG03009_ch_T0000165;gene_id=HG03009_ch_G0000042;Parent=HG03009_ch_T0000165;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=exon:HG03009_ch_T0000165:3;Name=LOC105377227;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	3425639	3460542	1000	+	.	source_transcript=hg002_chrY_paternal_58.3;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.3,hg002_chrY_paternal_58.3;transcript_id=HG03009_ch_T0000166;gene_id=HG03009_ch_G0000042;Parent=HG03009_ch_G0000042;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=HG03009_ch_T0000166;Name=LOC105377227
HG03009_chrY	CAT	exon	3425639	3428940	.	+	.	source_transcript=hg002_chrY_paternal_58.3;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.3,hg002_chrY_paternal_58.3;transcript_id=HG03009_ch_T0000166;gene_id=HG03009_ch_G0000042;Parent=HG03009_ch_T0000166;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=exon:HG03009_ch_T0000166:0;Name=LOC105377227;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	3428941	3429372	.	+	.	source_transcript=hg002_chrY_paternal_58.3;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.3,hg002_chrY_paternal_58.3;transcript_id=HG03009_ch_T0000166;gene_id=HG03009_ch_G0000042;Parent=HG03009_ch_T0000166;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=intron:HG03009_ch_T0000166:0;Name=LOC105377227;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	3429373	3429484	.	+	.	source_transcript=hg002_chrY_paternal_58.3;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.3,hg002_chrY_paternal_58.3;transcript_id=HG03009_ch_T0000166;gene_id=HG03009_ch_G0000042;Parent=HG03009_ch_T0000166;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=exon:HG03009_ch_T0000166:1;Name=LOC105377227;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	3429485	3460447	.	+	.	source_transcript=hg002_chrY_paternal_58.3;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.3,hg002_chrY_paternal_58.3;transcript_id=HG03009_ch_T0000166;gene_id=HG03009_ch_G0000042;Parent=HG03009_ch_T0000166;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=intron:HG03009_ch_T0000166:1;Name=LOC105377227;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	3460448	3460542	.	+	.	source_transcript=hg002_chrY_paternal_58.3;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.3,hg002_chrY_paternal_58.3;transcript_id=HG03009_ch_T0000166;gene_id=HG03009_ch_G0000042;Parent=HG03009_ch_T0000166;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=exon:HG03009_ch_T0000166:2;Name=LOC105377227;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	4233369	4233407	.	+	.	source_gene_common_name=MIR9985;source_gene=hg002_chrY_paternal_62;alternative_source_transcripts=hg002_chrY_paternal_62.1,hg002_chrY_paternal_62.1;gene_id=HG03009_ch_G0000043;gene_biotype=miRNA;gene_name=MIR9985;gene_sources=liftoff;ID=HG03009_ch_G0000043;Name=MIR9985
HG03009_chrY	CAT	transcript	4233369	4233479	1000	+	.	source_transcript=hg002_chrY_paternal_62.1;source_transcript_name=hg002_chrY_paternal_62.1;source_gene=hg002_chrY_paternal_62;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_62;gene_biotype=miRNA;transcript_biotype=primary_transcript;alignment_id=hg002_chrY_paternal_62.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_62.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR9985;alternative_source_transcripts=hg002_chrY_paternal_62.1,hg002_chrY_paternal_62.1;transcript_id=HG03009_ch_T0000167;gene_id=HG03009_ch_G0000043;Parent=HG03009_ch_G0000043;transcript_name=hg002_chrY_paternal_62.1;gene_name=MIR9985;ID=HG03009_ch_T0000167;Name=MIR9985
HG03009_chrY	CAT	exon	4233369	4233479	.	+	.	source_transcript=hg002_chrY_paternal_62.1;source_transcript_name=hg002_chrY_paternal_62.1;source_gene=hg002_chrY_paternal_62;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_62;gene_biotype=miRNA;transcript_biotype=primary_transcript;alignment_id=hg002_chrY_paternal_62.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_62.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR9985;alternative_source_transcripts=hg002_chrY_paternal_62.1,hg002_chrY_paternal_62.1;transcript_id=HG03009_ch_T0000167;gene_id=HG03009_ch_G0000043;Parent=HG03009_ch_T0000167;transcript_name=hg002_chrY_paternal_62.1;gene_name=MIR9985;ID=exon:HG03009_ch_T0000167:0;Name=MIR9985;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	4233389	4233407	1000	+	.	source_transcript=hg002_chrY_paternal_62.2;source_transcript_name=hg002_chrY_paternal_62.1;source_gene=hg002_chrY_paternal_62;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_62;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=hg002_chrY_paternal_62.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_62.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR9985;alternative_source_transcripts=hg002_chrY_paternal_62.2,hg002_chrY_paternal_62.2;transcript_id=HG03009_ch_T0000168;gene_id=HG03009_ch_G0000043;Parent=HG03009_ch_G0000043;transcript_name=hg002_chrY_paternal_62.1;gene_name=MIR9985;ID=HG03009_ch_T0000168;Name=MIR9985
HG03009_chrY	CAT	exon	4233389	4233407	.	+	.	source_transcript=hg002_chrY_paternal_62.2;source_transcript_name=hg002_chrY_paternal_62.1;source_gene=hg002_chrY_paternal_62;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_62;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=hg002_chrY_paternal_62.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_62.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR9985;alternative_source_transcripts=hg002_chrY_paternal_62.2,hg002_chrY_paternal_62.2;transcript_id=HG03009_ch_T0000168;gene_id=HG03009_ch_G0000043;Parent=HG03009_ch_T0000168;transcript_name=hg002_chrY_paternal_62.1;gene_name=MIR9985;ID=exon:HG03009_ch_T0000168:0;Name=MIR9985;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	4627545	5369957	.	+	.	source_gene_common_name=PCDH11Y;source_gene=hg002_chrY_paternal_64;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;gene_id=HG03009_ch_G0000044;gene_biotype=protein_coding;gene_name=PCDH11Y;gene_sources=liftoff,augTM;ID=HG03009_ch_G0000044;Name=PCDH11Y
HG03009_chrY	CAT	transcript	4627545	4732872	100	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000169;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_G0000044;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=HG03009_ch_T0000169;Name=PCDH11Y
HG03009_chrY	CAT	exon	4627545	4627854	.	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000169;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000169;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03009_ch_T0000169:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	4627855	4658160	.	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000169;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000169;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03009_ch_T0000169:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	4658161	4658329	.	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000169;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000169;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03009_ch_T0000169:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	4658330	4659167	.	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000169;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000169;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03009_ch_T0000169:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	4659168	4659273	.	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000169;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000169;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03009_ch_T0000169:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	4659274	4659931	.	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000169;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000169;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03009_ch_T0000169:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	4659932	4659990	.	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000169;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000169;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03009_ch_T0000169:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	4659959	4659990	.	+	0	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000169;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000169;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03009_ch_T0000169:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	4659959	4659961	.	+	0	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000169;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000169;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=start_codon:HG03009_ch_T0000169;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	4659991	4684150	.	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000169;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000169;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03009_ch_T0000169:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	4684151	4684721	.	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000169;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000169;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03009_ch_T0000169:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	4684151	4684721	.	+	1	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000169;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000169;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03009_ch_T0000169:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	4684722	4725488	.	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000169;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000169;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03009_ch_T0000169:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	4725489	4727981	.	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000169;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000169;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03009_ch_T0000169:5;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	4725489	4727981	.	+	0	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000169;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000169;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03009_ch_T0000169:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	4727982	4731617	.	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000169;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000169;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03009_ch_T0000169:5;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	4731618	4732872	.	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000169;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000169;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03009_ch_T0000169:6;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	4731618	4731635	.	+	0	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000169;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000169;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03009_ch_T0000169:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	4731633	4731635	.	+	0	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000169;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000169;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=stop_codon:HG03009_ch_T0000169;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	4627545	4732872	100	+	.	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000170;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_G0000044;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=HG03009_ch_T0000170;Name=PCDH11Y
HG03009_chrY	CAT	exon	4627545	4627854	.	+	.	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000170;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000170;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03009_ch_T0000170:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	4627855	4659167	.	+	.	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000170;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000170;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03009_ch_T0000170:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	4659168	4659273	.	+	.	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000170;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000170;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03009_ch_T0000170:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	4659274	4659931	.	+	.	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000170;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000170;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03009_ch_T0000170:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	4659932	4659990	.	+	.	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000170;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000170;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03009_ch_T0000170:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	4659959	4659990	.	+	0	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000170;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000170;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03009_ch_T0000170:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	4659959	4659961	.	+	0	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000170;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000170;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=start_codon:HG03009_ch_T0000170;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	4659991	4684150	.	+	.	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000170;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000170;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03009_ch_T0000170:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	4684151	4684721	.	+	.	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000170;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000170;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03009_ch_T0000170:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	4684151	4684721	.	+	1	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000170;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000170;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03009_ch_T0000170:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	4684722	4725488	.	+	.	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000170;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000170;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03009_ch_T0000170:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	4725489	4727981	.	+	.	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000170;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000170;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03009_ch_T0000170:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	4725489	4727981	.	+	0	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000170;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000170;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03009_ch_T0000170:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	4727982	4731617	.	+	.	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000170;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000170;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03009_ch_T0000170:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	4731618	4732872	.	+	.	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000170;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000170;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03009_ch_T0000170:5;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	4731618	4731635	.	+	0	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000170;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000170;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03009_ch_T0000170:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	4731633	4731635	.	+	0	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000170;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000170;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=stop_codon:HG03009_ch_T0000170;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	4627545	5369953	100	+	.	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000171;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_G0000044;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=HG03009_ch_T0000171;Name=PCDH11Y
HG03009_chrY	CAT	exon	4627545	4627854	.	+	.	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000171;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000171;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03009_ch_T0000171:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	4627855	4684150	.	+	.	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000171;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000171;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03009_ch_T0000171:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	4684151	4684721	.	+	.	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000171;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000171;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03009_ch_T0000171:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	4684362	4684721	.	+	0	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000171;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000171;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03009_ch_T0000171:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	4684362	4684364	.	+	0	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000171;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000171;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=start_codon:HG03009_ch_T0000171;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	4684722	4725488	.	+	.	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000171;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000171;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03009_ch_T0000171:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	4725489	4727981	.	+	.	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000171;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000171;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03009_ch_T0000171:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	4725489	4727981	.	+	0	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000171;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000171;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03009_ch_T0000171:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	4727982	5128342	.	+	.	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000171;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000171;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03009_ch_T0000171:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	5128343	5128541	.	+	.	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000171;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000171;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03009_ch_T0000171:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	5128343	5128541	.	+	0	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000171;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000171;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03009_ch_T0000171:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	5128542	5209513	.	+	.	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000171;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000171;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03009_ch_T0000171:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	5209514	5209537	.	+	.	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000171;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000171;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03009_ch_T0000171:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	5209514	5209537	.	+	2	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000171;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000171;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03009_ch_T0000171:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	5209538	5365000	.	+	.	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000171;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000171;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03009_ch_T0000171:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	5365001	5369953	.	+	.	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000171;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000171;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03009_ch_T0000171:5;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	5365001	5365671	.	+	2	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000171;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000171;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03009_ch_T0000171:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	5365669	5365671	.	+	0	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000171;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000171;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=stop_codon:HG03009_ch_T0000171;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	4627545	5369957	100	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000172;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_G0000044;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=HG03009_ch_T0000172;Name=PCDH11Y
HG03009_chrY	CAT	exon	4627545	4627854	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000172;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000172;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03009_ch_T0000172:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	4627855	4629936	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000172;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000172;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03009_ch_T0000172:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	4629937	4633984	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000172;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000172;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03009_ch_T0000172:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	4633985	4658160	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000172;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000172;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03009_ch_T0000172:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	4658161	4658329	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000172;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000172;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03009_ch_T0000172:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	4658330	4658476	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000172;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000172;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03009_ch_T0000172:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	4658477	4658608	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000172;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000172;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03009_ch_T0000172:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	4658609	4659167	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000172;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000172;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03009_ch_T0000172:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	4659168	4659273	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000172;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000172;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03009_ch_T0000172:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	4659274	4659931	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000172;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000172;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03009_ch_T0000172:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	4659932	4659990	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000172;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000172;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03009_ch_T0000172:5;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	4659959	4659990	.	+	0	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000172;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000172;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03009_ch_T0000172:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	4659959	4659961	.	+	0	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000172;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000172;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=start_codon:HG03009_ch_T0000172;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	4659991	4684150	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000172;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000172;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03009_ch_T0000172:5;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	4684151	4684721	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000172;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000172;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03009_ch_T0000172:6;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	4684151	4684721	.	+	1	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000172;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000172;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03009_ch_T0000172:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	4684722	4725488	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000172;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000172;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03009_ch_T0000172:6;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	4725489	4727981	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000172;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000172;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03009_ch_T0000172:7;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	4725489	4727981	.	+	0	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000172;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000172;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03009_ch_T0000172:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	4727982	5128342	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000172;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000172;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03009_ch_T0000172:7;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	5128343	5128541	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000172;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000172;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03009_ch_T0000172:8;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	5128343	5128541	.	+	0	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000172;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000172;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03009_ch_T0000172:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	5128542	5209513	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000172;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000172;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03009_ch_T0000172:8;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	5209514	5209537	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000172;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000172;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03009_ch_T0000172:9;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	5209514	5209537	.	+	2	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000172;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000172;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03009_ch_T0000172:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	5209538	5365000	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000172;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000172;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03009_ch_T0000172:9;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	5365001	5369957	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000172;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000172;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03009_ch_T0000172:10;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	5365001	5365671	.	+	2	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000172;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000172;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03009_ch_T0000172:5;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	5365669	5365671	.	+	0	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000172;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000172;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=stop_codon:HG03009_ch_T0000172;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	4627545	5369957	100	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000173;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_G0000044;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=HG03009_ch_T0000173;Name=PCDH11Y
HG03009_chrY	CAT	exon	4627545	4627854	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000173;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000173;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03009_ch_T0000173:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	4627855	4658160	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000173;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000173;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03009_ch_T0000173:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	4658161	4658329	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000173;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000173;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03009_ch_T0000173:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	4658330	4658476	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000173;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000173;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03009_ch_T0000173:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	4658477	4658608	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000173;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000173;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03009_ch_T0000173:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	4658609	4659167	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000173;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000173;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03009_ch_T0000173:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	4659168	4659273	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000173;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000173;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03009_ch_T0000173:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	4659274	4659931	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000173;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000173;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03009_ch_T0000173:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	4659932	4659990	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000173;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000173;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03009_ch_T0000173:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	4659959	4659990	.	+	0	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000173;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000173;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03009_ch_T0000173:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	4659959	4659961	.	+	0	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000173;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000173;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=start_codon:HG03009_ch_T0000173;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	4659991	4684150	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000173;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000173;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03009_ch_T0000173:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	4684151	4684721	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000173;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000173;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03009_ch_T0000173:5;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	4684151	4684721	.	+	1	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000173;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000173;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03009_ch_T0000173:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	4684722	4725488	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000173;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000173;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03009_ch_T0000173:5;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	4725489	4727981	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000173;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000173;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03009_ch_T0000173:6;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	4725489	4727981	.	+	0	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000173;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000173;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03009_ch_T0000173:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	4727982	5128342	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000173;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000173;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03009_ch_T0000173:6;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	5128343	5128541	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000173;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000173;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03009_ch_T0000173:7;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	5128343	5128541	.	+	0	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000173;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000173;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03009_ch_T0000173:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	5128542	5209513	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000173;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000173;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03009_ch_T0000173:7;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	5209514	5209537	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000173;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000173;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03009_ch_T0000173:8;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	5209514	5209537	.	+	2	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000173;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000173;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03009_ch_T0000173:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	5209538	5365000	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000173;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000173;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03009_ch_T0000173:8;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	5365001	5369957	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000173;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000173;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03009_ch_T0000173:9;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	5365001	5365671	.	+	2	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000173;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000173;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03009_ch_T0000173:5;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	5365669	5365671	.	+	0	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000173;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000173;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=stop_codon:HG03009_ch_T0000173;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	4627545	5369957	100	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000174;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_G0000044;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=HG03009_ch_T0000174;Name=PCDH11Y
HG03009_chrY	CAT	exon	4627545	4627854	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000174;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000174;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03009_ch_T0000174:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	4627855	4629936	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000174;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000174;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03009_ch_T0000174:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	4629937	4630007	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000174;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000174;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03009_ch_T0000174:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	4630008	4659167	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000174;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000174;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03009_ch_T0000174:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	4659168	4659273	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000174;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000174;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03009_ch_T0000174:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	4659274	4659931	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000174;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000174;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03009_ch_T0000174:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	4659932	4659990	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000174;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000174;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03009_ch_T0000174:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	4659959	4659990	.	+	0	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000174;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000174;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03009_ch_T0000174:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	4659959	4659961	.	+	0	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000174;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000174;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=start_codon:HG03009_ch_T0000174;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	4659991	4684150	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000174;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000174;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03009_ch_T0000174:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	4684151	4684721	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000174;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000174;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03009_ch_T0000174:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	4684151	4684721	.	+	1	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000174;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000174;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03009_ch_T0000174:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	4684722	4725488	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000174;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000174;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03009_ch_T0000174:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	4725489	4727981	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000174;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000174;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03009_ch_T0000174:5;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	4725489	4727981	.	+	0	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000174;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000174;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03009_ch_T0000174:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	4727982	5128342	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000174;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000174;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03009_ch_T0000174:5;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	5128343	5128541	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000174;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000174;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03009_ch_T0000174:6;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	5128343	5128541	.	+	0	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000174;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000174;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03009_ch_T0000174:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	5128542	5209513	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000174;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000174;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03009_ch_T0000174:6;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	5209514	5209537	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000174;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000174;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03009_ch_T0000174:7;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	5209514	5209537	.	+	2	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000174;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000174;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03009_ch_T0000174:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	5209538	5365000	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000174;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000174;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03009_ch_T0000174:7;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	5365001	5369957	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000174;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000174;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03009_ch_T0000174:8;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	5365001	5365671	.	+	2	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000174;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000174;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03009_ch_T0000174:5;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	5365669	5365671	.	+	0	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000174;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000174;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=stop_codon:HG03009_ch_T0000174;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	4683350	4732872	100	+	.	source_transcript=hg002_chrY_paternal_64.7;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.7,hg002_chrY_paternal_64.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000175;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_G0000044;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=HG03009_ch_T0000175;Name=PCDH11Y
HG03009_chrY	CAT	exon	4683350	4684721	.	+	.	source_transcript=hg002_chrY_paternal_64.7;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.7,hg002_chrY_paternal_64.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000175;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000175;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03009_ch_T0000175:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	4684086	4684721	.	+	0	source_transcript=hg002_chrY_paternal_64.7;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.7,hg002_chrY_paternal_64.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000175;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000175;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03009_ch_T0000175:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	4684086	4684088	.	+	0	source_transcript=hg002_chrY_paternal_64.7;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.7,hg002_chrY_paternal_64.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000175;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000175;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=start_codon:HG03009_ch_T0000175;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	4684722	4725488	.	+	.	source_transcript=hg002_chrY_paternal_64.7;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.7,hg002_chrY_paternal_64.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000175;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000175;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03009_ch_T0000175:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	4725489	4727981	.	+	.	source_transcript=hg002_chrY_paternal_64.7;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.7,hg002_chrY_paternal_64.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000175;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000175;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03009_ch_T0000175:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	4725489	4727981	.	+	0	source_transcript=hg002_chrY_paternal_64.7;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.7,hg002_chrY_paternal_64.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000175;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000175;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03009_ch_T0000175:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	4727982	4731617	.	+	.	source_transcript=hg002_chrY_paternal_64.7;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.7,hg002_chrY_paternal_64.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000175;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000175;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03009_ch_T0000175:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	4731618	4732872	.	+	.	source_transcript=hg002_chrY_paternal_64.7;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.7,hg002_chrY_paternal_64.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000175;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000175;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03009_ch_T0000175:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	4731618	4731635	.	+	0	source_transcript=hg002_chrY_paternal_64.7;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.7,hg002_chrY_paternal_64.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000175;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000175;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03009_ch_T0000175:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	4731633	4731635	.	+	0	source_transcript=hg002_chrY_paternal_64.7;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.7,hg002_chrY_paternal_64.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000175;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000175;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=stop_codon:HG03009_ch_T0000175;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	4683352	5369957	100	+	.	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000176;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_G0000044;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=HG03009_ch_T0000176;Name=PCDH11Y
HG03009_chrY	CAT	exon	4683352	4684721	.	+	.	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000176;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000176;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03009_ch_T0000176:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	4684086	4684721	.	+	0	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000176;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000176;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03009_ch_T0000176:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	4684086	4684088	.	+	0	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000176;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000176;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=start_codon:HG03009_ch_T0000176;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	4684722	4725488	.	+	.	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000176;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000176;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03009_ch_T0000176:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	4725489	4727981	.	+	.	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000176;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000176;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03009_ch_T0000176:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	4725489	4727981	.	+	0	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000176;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000176;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03009_ch_T0000176:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	4727982	5128342	.	+	.	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000176;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000176;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03009_ch_T0000176:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	5128343	5128541	.	+	.	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000176;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000176;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03009_ch_T0000176:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	5128343	5128541	.	+	0	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000176;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000176;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03009_ch_T0000176:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	5128542	5209513	.	+	.	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000176;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000176;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03009_ch_T0000176:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	5209514	5209537	.	+	.	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000176;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000176;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03009_ch_T0000176:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	5209514	5209537	.	+	2	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000176;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000176;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03009_ch_T0000176:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	5209538	5365000	.	+	.	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000176;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000176;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03009_ch_T0000176:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	5365001	5369957	.	+	.	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000176;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000176;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03009_ch_T0000176:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	5365001	5365671	.	+	2	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000176;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000176;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03009_ch_T0000176:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	5365669	5365671	.	+	0	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000176;gene_id=HG03009_ch_G0000044;Parent=HG03009_ch_T0000176;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=stop_codon:HG03009_ch_T0000176;Name=PCDH11Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	5870153	5871317	.	-	.	source_gene_common_name=TTTY23;source_gene=hg002_chrY_paternal_73;alternative_source_transcripts=hg002_chrY_paternal_73.1,hg002_chrY_paternal_73.1;gene_id=HG03009_ch_G0000045;gene_biotype=lncRNA;gene_name=TTTY23;gene_sources=liftoff;ID=HG03009_ch_G0000045;Name=TTTY23
HG03009_chrY	CAT	transcript	5870153	5871317	1000	-	.	source_transcript=hg002_chrY_paternal_73.1;source_transcript_name=hg002_chrY_paternal_73.1;source_gene=hg002_chrY_paternal_73;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_73;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_73.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_73.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=hg002_chrY_paternal_73.1,hg002_chrY_paternal_73.1;transcript_id=HG03009_ch_T0000177;gene_id=HG03009_ch_G0000045;Parent=HG03009_ch_G0000045;transcript_name=hg002_chrY_paternal_73.1;gene_name=TTTY23;ID=HG03009_ch_T0000177;Name=TTTY23
HG03009_chrY	CAT	exon	5870153	5870461	.	-	.	source_transcript=hg002_chrY_paternal_73.1;source_transcript_name=hg002_chrY_paternal_73.1;source_gene=hg002_chrY_paternal_73;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_73;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_73.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_73.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=hg002_chrY_paternal_73.1,hg002_chrY_paternal_73.1;transcript_id=HG03009_ch_T0000177;gene_id=HG03009_ch_G0000045;Parent=HG03009_ch_T0000177;transcript_name=hg002_chrY_paternal_73.1;gene_name=TTTY23;ID=exon:HG03009_ch_T0000177:0;Name=TTTY23;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	5870462	5871001	.	-	.	source_transcript=hg002_chrY_paternal_73.1;source_transcript_name=hg002_chrY_paternal_73.1;source_gene=hg002_chrY_paternal_73;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_73;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_73.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_73.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=hg002_chrY_paternal_73.1,hg002_chrY_paternal_73.1;transcript_id=HG03009_ch_T0000177;gene_id=HG03009_ch_G0000045;Parent=HG03009_ch_T0000177;transcript_name=hg002_chrY_paternal_73.1;gene_name=TTTY23;ID=intron:HG03009_ch_T0000177:0;Name=TTTY23;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	5871002	5871147	.	-	.	source_transcript=hg002_chrY_paternal_73.1;source_transcript_name=hg002_chrY_paternal_73.1;source_gene=hg002_chrY_paternal_73;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_73;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_73.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_73.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=hg002_chrY_paternal_73.1,hg002_chrY_paternal_73.1;transcript_id=HG03009_ch_T0000177;gene_id=HG03009_ch_G0000045;Parent=HG03009_ch_T0000177;transcript_name=hg002_chrY_paternal_73.1;gene_name=TTTY23;ID=exon:HG03009_ch_T0000177:1;Name=TTTY23;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	5871148	5871260	.	-	.	source_transcript=hg002_chrY_paternal_73.1;source_transcript_name=hg002_chrY_paternal_73.1;source_gene=hg002_chrY_paternal_73;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_73;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_73.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_73.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=hg002_chrY_paternal_73.1,hg002_chrY_paternal_73.1;transcript_id=HG03009_ch_T0000177;gene_id=HG03009_ch_G0000045;Parent=HG03009_ch_T0000177;transcript_name=hg002_chrY_paternal_73.1;gene_name=TTTY23;ID=intron:HG03009_ch_T0000177:1;Name=TTTY23;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	5871261	5871317	.	-	.	source_transcript=hg002_chrY_paternal_73.1;source_transcript_name=hg002_chrY_paternal_73.1;source_gene=hg002_chrY_paternal_73;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_73;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_73.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_73.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=hg002_chrY_paternal_73.1,hg002_chrY_paternal_73.1;transcript_id=HG03009_ch_T0000177;gene_id=HG03009_ch_G0000045;Parent=HG03009_ch_T0000177;transcript_name=hg002_chrY_paternal_73.1;gene_name=TTTY23;ID=exon:HG03009_ch_T0000177:2;Name=TTTY23;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	5964598	5968796	.	-	.	source_gene_common_name=LINC00280;source_gene=hg002_chrY_paternal_77;alternative_source_transcripts=hg002_chrY_paternal_77.1,hg002_chrY_paternal_77.1;gene_id=HG03009_ch_G0000046;gene_biotype=lncRNA;gene_name=LINC00280;gene_sources=liftoff;ID=HG03009_ch_G0000046;Name=LINC00280
HG03009_chrY	CAT	transcript	5964598	5968796	1000	-	.	source_transcript=hg002_chrY_paternal_77.1;source_transcript_name=hg002_chrY_paternal_77.1;source_gene=hg002_chrY_paternal_77;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_77;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_77.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_77.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=hg002_chrY_paternal_77.1,hg002_chrY_paternal_77.1;transcript_id=HG03009_ch_T0000178;gene_id=HG03009_ch_G0000046;Parent=HG03009_ch_G0000046;transcript_name=hg002_chrY_paternal_77.1;gene_name=LINC00280;ID=HG03009_ch_T0000178;Name=LINC00280
HG03009_chrY	CAT	exon	5964598	5964816	.	-	.	source_transcript=hg002_chrY_paternal_77.1;source_transcript_name=hg002_chrY_paternal_77.1;source_gene=hg002_chrY_paternal_77;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_77;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_77.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_77.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=hg002_chrY_paternal_77.1,hg002_chrY_paternal_77.1;transcript_id=HG03009_ch_T0000178;gene_id=HG03009_ch_G0000046;Parent=HG03009_ch_T0000178;transcript_name=hg002_chrY_paternal_77.1;gene_name=LINC00280;ID=exon:HG03009_ch_T0000178:0;Name=LINC00280;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	5964817	5966066	.	-	.	source_transcript=hg002_chrY_paternal_77.1;source_transcript_name=hg002_chrY_paternal_77.1;source_gene=hg002_chrY_paternal_77;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_77;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_77.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_77.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=hg002_chrY_paternal_77.1,hg002_chrY_paternal_77.1;transcript_id=HG03009_ch_T0000178;gene_id=HG03009_ch_G0000046;Parent=HG03009_ch_T0000178;transcript_name=hg002_chrY_paternal_77.1;gene_name=LINC00280;ID=intron:HG03009_ch_T0000178:0;Name=LINC00280;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	5966067	5966209	.	-	.	source_transcript=hg002_chrY_paternal_77.1;source_transcript_name=hg002_chrY_paternal_77.1;source_gene=hg002_chrY_paternal_77;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_77;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_77.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_77.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=hg002_chrY_paternal_77.1,hg002_chrY_paternal_77.1;transcript_id=HG03009_ch_T0000178;gene_id=HG03009_ch_G0000046;Parent=HG03009_ch_T0000178;transcript_name=hg002_chrY_paternal_77.1;gene_name=LINC00280;ID=exon:HG03009_ch_T0000178:1;Name=LINC00280;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	5966210	5968710	.	-	.	source_transcript=hg002_chrY_paternal_77.1;source_transcript_name=hg002_chrY_paternal_77.1;source_gene=hg002_chrY_paternal_77;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_77;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_77.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_77.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=hg002_chrY_paternal_77.1,hg002_chrY_paternal_77.1;transcript_id=HG03009_ch_T0000178;gene_id=HG03009_ch_G0000046;Parent=HG03009_ch_T0000178;transcript_name=hg002_chrY_paternal_77.1;gene_name=LINC00280;ID=intron:HG03009_ch_T0000178:1;Name=LINC00280;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	5968711	5968796	.	-	.	source_transcript=hg002_chrY_paternal_77.1;source_transcript_name=hg002_chrY_paternal_77.1;source_gene=hg002_chrY_paternal_77;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_77;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_77.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_77.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=hg002_chrY_paternal_77.1,hg002_chrY_paternal_77.1;transcript_id=HG03009_ch_T0000178;gene_id=HG03009_ch_G0000046;Parent=HG03009_ch_T0000178;transcript_name=hg002_chrY_paternal_77.1;gene_name=LINC00280;ID=exon:HG03009_ch_T0000178:2;Name=LINC00280;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	5968866	5980952	.	-	.	source_gene_common_name=TTTY22;source_gene=hg002_chrY_paternal_78;alternative_source_transcripts=hg002_chrY_paternal_78.1,hg002_chrY_paternal_78.1;gene_id=HG03009_ch_G0000047;gene_biotype=lncRNA;gene_name=TTTY22;gene_sources=liftoff;ID=HG03009_ch_G0000047;Name=TTTY22
HG03009_chrY	CAT	transcript	5968866	5980952	1000	-	.	source_transcript=hg002_chrY_paternal_78.1;source_transcript_name=hg002_chrY_paternal_78.1;source_gene=hg002_chrY_paternal_78;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_78;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_78.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_78.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;alternative_source_transcripts=hg002_chrY_paternal_78.1,hg002_chrY_paternal_78.1;transcript_id=HG03009_ch_T0000179;gene_id=HG03009_ch_G0000047;Parent=HG03009_ch_G0000047;transcript_name=hg002_chrY_paternal_78.1;gene_name=TTTY22;ID=HG03009_ch_T0000179;Name=TTTY22
HG03009_chrY	CAT	exon	5968866	5968911	.	-	.	source_transcript=hg002_chrY_paternal_78.1;source_transcript_name=hg002_chrY_paternal_78.1;source_gene=hg002_chrY_paternal_78;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_78;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_78.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_78.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;alternative_source_transcripts=hg002_chrY_paternal_78.1,hg002_chrY_paternal_78.1;transcript_id=HG03009_ch_T0000179;gene_id=HG03009_ch_G0000047;Parent=HG03009_ch_T0000179;transcript_name=hg002_chrY_paternal_78.1;gene_name=TTTY22;ID=exon:HG03009_ch_T0000179:0;Name=TTTY22;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	5968912	5972001	.	-	.	source_transcript=hg002_chrY_paternal_78.1;source_transcript_name=hg002_chrY_paternal_78.1;source_gene=hg002_chrY_paternal_78;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_78;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_78.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_78.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;alternative_source_transcripts=hg002_chrY_paternal_78.1,hg002_chrY_paternal_78.1;transcript_id=HG03009_ch_T0000179;gene_id=HG03009_ch_G0000047;Parent=HG03009_ch_T0000179;transcript_name=hg002_chrY_paternal_78.1;gene_name=TTTY22;ID=intron:HG03009_ch_T0000179:0;Name=TTTY22;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	5972002	5972040	.	-	.	source_transcript=hg002_chrY_paternal_78.1;source_transcript_name=hg002_chrY_paternal_78.1;source_gene=hg002_chrY_paternal_78;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_78;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_78.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_78.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;alternative_source_transcripts=hg002_chrY_paternal_78.1,hg002_chrY_paternal_78.1;transcript_id=HG03009_ch_T0000179;gene_id=HG03009_ch_G0000047;Parent=HG03009_ch_T0000179;transcript_name=hg002_chrY_paternal_78.1;gene_name=TTTY22;ID=exon:HG03009_ch_T0000179:1;Name=TTTY22;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	5972041	5972725	.	-	.	source_transcript=hg002_chrY_paternal_78.1;source_transcript_name=hg002_chrY_paternal_78.1;source_gene=hg002_chrY_paternal_78;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_78;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_78.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_78.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;alternative_source_transcripts=hg002_chrY_paternal_78.1,hg002_chrY_paternal_78.1;transcript_id=HG03009_ch_T0000179;gene_id=HG03009_ch_G0000047;Parent=HG03009_ch_T0000179;transcript_name=hg002_chrY_paternal_78.1;gene_name=TTTY22;ID=intron:HG03009_ch_T0000179:1;Name=TTTY22;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	5972726	5972800	.	-	.	source_transcript=hg002_chrY_paternal_78.1;source_transcript_name=hg002_chrY_paternal_78.1;source_gene=hg002_chrY_paternal_78;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_78;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_78.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_78.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;alternative_source_transcripts=hg002_chrY_paternal_78.1,hg002_chrY_paternal_78.1;transcript_id=HG03009_ch_T0000179;gene_id=HG03009_ch_G0000047;Parent=HG03009_ch_T0000179;transcript_name=hg002_chrY_paternal_78.1;gene_name=TTTY22;ID=exon:HG03009_ch_T0000179:2;Name=TTTY22;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	5972801	5977225	.	-	.	source_transcript=hg002_chrY_paternal_78.1;source_transcript_name=hg002_chrY_paternal_78.1;source_gene=hg002_chrY_paternal_78;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_78;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_78.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_78.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;alternative_source_transcripts=hg002_chrY_paternal_78.1,hg002_chrY_paternal_78.1;transcript_id=HG03009_ch_T0000179;gene_id=HG03009_ch_G0000047;Parent=HG03009_ch_T0000179;transcript_name=hg002_chrY_paternal_78.1;gene_name=TTTY22;ID=intron:HG03009_ch_T0000179:2;Name=TTTY22;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	5977226	5977337	.	-	.	source_transcript=hg002_chrY_paternal_78.1;source_transcript_name=hg002_chrY_paternal_78.1;source_gene=hg002_chrY_paternal_78;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_78;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_78.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_78.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;alternative_source_transcripts=hg002_chrY_paternal_78.1,hg002_chrY_paternal_78.1;transcript_id=HG03009_ch_T0000179;gene_id=HG03009_ch_G0000047;Parent=HG03009_ch_T0000179;transcript_name=hg002_chrY_paternal_78.1;gene_name=TTTY22;ID=exon:HG03009_ch_T0000179:3;Name=TTTY22;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	5977338	5980797	.	-	.	source_transcript=hg002_chrY_paternal_78.1;source_transcript_name=hg002_chrY_paternal_78.1;source_gene=hg002_chrY_paternal_78;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_78;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_78.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_78.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;alternative_source_transcripts=hg002_chrY_paternal_78.1,hg002_chrY_paternal_78.1;transcript_id=HG03009_ch_T0000179;gene_id=HG03009_ch_G0000047;Parent=HG03009_ch_T0000179;transcript_name=hg002_chrY_paternal_78.1;gene_name=TTTY22;ID=intron:HG03009_ch_T0000179:3;Name=TTTY22;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	5980798	5980952	.	-	.	source_transcript=hg002_chrY_paternal_78.1;source_transcript_name=hg002_chrY_paternal_78.1;source_gene=hg002_chrY_paternal_78;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_78;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_78.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_78.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;alternative_source_transcripts=hg002_chrY_paternal_78.1,hg002_chrY_paternal_78.1;transcript_id=HG03009_ch_T0000179;gene_id=HG03009_ch_G0000047;Parent=HG03009_ch_T0000179;transcript_name=hg002_chrY_paternal_78.1;gene_name=TTTY22;ID=exon:HG03009_ch_T0000179:4;Name=TTTY22;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	5984008	5987315	.	-	.	source_gene_common_name=LOC107987342;source_gene=hg002_chrY_paternal_79;alternative_source_transcripts=hg002_chrY_paternal_79.1,hg002_chrY_paternal_79.1;gene_id=HG03009_ch_G0000048;gene_biotype=lncRNA;gene_name=LOC107987342;gene_sources=liftoff;ID=HG03009_ch_G0000048;Name=LOC107987342
HG03009_chrY	CAT	transcript	5984008	5987315	1000	-	.	source_transcript=hg002_chrY_paternal_79.1;source_transcript_name=hg002_chrY_paternal_79.1;source_gene=hg002_chrY_paternal_79;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_79;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_79.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_79.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987342;alternative_source_transcripts=hg002_chrY_paternal_79.1,hg002_chrY_paternal_79.1;transcript_id=HG03009_ch_T0000180;gene_id=HG03009_ch_G0000048;Parent=HG03009_ch_G0000048;transcript_name=hg002_chrY_paternal_79.1;gene_name=LOC107987342;ID=HG03009_ch_T0000180;Name=LOC107987342
HG03009_chrY	CAT	exon	5984008	5984156	.	-	.	source_transcript=hg002_chrY_paternal_79.1;source_transcript_name=hg002_chrY_paternal_79.1;source_gene=hg002_chrY_paternal_79;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_79;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_79.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_79.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987342;alternative_source_transcripts=hg002_chrY_paternal_79.1,hg002_chrY_paternal_79.1;transcript_id=HG03009_ch_T0000180;gene_id=HG03009_ch_G0000048;Parent=HG03009_ch_T0000180;transcript_name=hg002_chrY_paternal_79.1;gene_name=LOC107987342;ID=exon:HG03009_ch_T0000180:0;Name=LOC107987342;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	5984157	5986687	.	-	.	source_transcript=hg002_chrY_paternal_79.1;source_transcript_name=hg002_chrY_paternal_79.1;source_gene=hg002_chrY_paternal_79;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_79;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_79.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_79.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987342;alternative_source_transcripts=hg002_chrY_paternal_79.1,hg002_chrY_paternal_79.1;transcript_id=HG03009_ch_T0000180;gene_id=HG03009_ch_G0000048;Parent=HG03009_ch_T0000180;transcript_name=hg002_chrY_paternal_79.1;gene_name=LOC107987342;ID=intron:HG03009_ch_T0000180:0;Name=LOC107987342;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	5986688	5986760	.	-	.	source_transcript=hg002_chrY_paternal_79.1;source_transcript_name=hg002_chrY_paternal_79.1;source_gene=hg002_chrY_paternal_79;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_79;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_79.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_79.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987342;alternative_source_transcripts=hg002_chrY_paternal_79.1,hg002_chrY_paternal_79.1;transcript_id=HG03009_ch_T0000180;gene_id=HG03009_ch_G0000048;Parent=HG03009_ch_T0000180;transcript_name=hg002_chrY_paternal_79.1;gene_name=LOC107987342;ID=exon:HG03009_ch_T0000180:1;Name=LOC107987342;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	5986761	5987136	.	-	.	source_transcript=hg002_chrY_paternal_79.1;source_transcript_name=hg002_chrY_paternal_79.1;source_gene=hg002_chrY_paternal_79;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_79;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_79.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_79.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987342;alternative_source_transcripts=hg002_chrY_paternal_79.1,hg002_chrY_paternal_79.1;transcript_id=HG03009_ch_T0000180;gene_id=HG03009_ch_G0000048;Parent=HG03009_ch_T0000180;transcript_name=hg002_chrY_paternal_79.1;gene_name=LOC107987342;ID=intron:HG03009_ch_T0000180:1;Name=LOC107987342;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	5987137	5987315	.	-	.	source_transcript=hg002_chrY_paternal_79.1;source_transcript_name=hg002_chrY_paternal_79.1;source_gene=hg002_chrY_paternal_79;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_79;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_79.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_79.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987342;alternative_source_transcripts=hg002_chrY_paternal_79.1,hg002_chrY_paternal_79.1;transcript_id=HG03009_ch_T0000180;gene_id=HG03009_ch_G0000048;Parent=HG03009_ch_T0000180;transcript_name=hg002_chrY_paternal_79.1;gene_name=LOC107987342;ID=exon:HG03009_ch_T0000180:2;Name=LOC107987342;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	6007786	6028949	.	+	.	source_gene_common_name=TTTY1;source_gene=hg002_chrY_paternal_80;alternative_source_transcripts=hg002_chrY_paternal_80.1,hg002_chrY_paternal_80.1;gene_id=HG03009_ch_G0000049;gene_biotype=lncRNA;gene_name=TTTY1;gene_sources=liftoff;ID=HG03009_ch_G0000049;Name=TTTY1
HG03009_chrY	CAT	transcript	6007786	6028949	1000	+	.	source_transcript=hg002_chrY_paternal_80.1;source_transcript_name=hg002_chrY_paternal_80.1;source_gene=hg002_chrY_paternal_80;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_80;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_80.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_80.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=hg002_chrY_paternal_80.1,hg002_chrY_paternal_80.1;transcript_id=HG03009_ch_T0000181;gene_id=HG03009_ch_G0000049;Parent=HG03009_ch_G0000049;transcript_name=hg002_chrY_paternal_80.1;gene_name=TTTY1;ID=HG03009_ch_T0000181;Name=TTTY1
HG03009_chrY	CAT	exon	6007786	6008060	.	+	.	source_transcript=hg002_chrY_paternal_80.1;source_transcript_name=hg002_chrY_paternal_80.1;source_gene=hg002_chrY_paternal_80;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_80;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_80.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_80.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=hg002_chrY_paternal_80.1,hg002_chrY_paternal_80.1;transcript_id=HG03009_ch_T0000181;gene_id=HG03009_ch_G0000049;Parent=HG03009_ch_T0000181;transcript_name=hg002_chrY_paternal_80.1;gene_name=TTTY1;ID=exon:HG03009_ch_T0000181:0;Name=TTTY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6008061	6011484	.	+	.	source_transcript=hg002_chrY_paternal_80.1;source_transcript_name=hg002_chrY_paternal_80.1;source_gene=hg002_chrY_paternal_80;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_80;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_80.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_80.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=hg002_chrY_paternal_80.1,hg002_chrY_paternal_80.1;transcript_id=HG03009_ch_T0000181;gene_id=HG03009_ch_G0000049;Parent=HG03009_ch_T0000181;transcript_name=hg002_chrY_paternal_80.1;gene_name=TTTY1;ID=intron:HG03009_ch_T0000181:0;Name=TTTY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6011485	6011644	.	+	.	source_transcript=hg002_chrY_paternal_80.1;source_transcript_name=hg002_chrY_paternal_80.1;source_gene=hg002_chrY_paternal_80;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_80;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_80.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_80.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=hg002_chrY_paternal_80.1,hg002_chrY_paternal_80.1;transcript_id=HG03009_ch_T0000181;gene_id=HG03009_ch_G0000049;Parent=HG03009_ch_T0000181;transcript_name=hg002_chrY_paternal_80.1;gene_name=TTTY1;ID=exon:HG03009_ch_T0000181:1;Name=TTTY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6011645	6018507	.	+	.	source_transcript=hg002_chrY_paternal_80.1;source_transcript_name=hg002_chrY_paternal_80.1;source_gene=hg002_chrY_paternal_80;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_80;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_80.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_80.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=hg002_chrY_paternal_80.1,hg002_chrY_paternal_80.1;transcript_id=HG03009_ch_T0000181;gene_id=HG03009_ch_G0000049;Parent=HG03009_ch_T0000181;transcript_name=hg002_chrY_paternal_80.1;gene_name=TTTY1;ID=intron:HG03009_ch_T0000181:1;Name=TTTY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6018508	6018616	.	+	.	source_transcript=hg002_chrY_paternal_80.1;source_transcript_name=hg002_chrY_paternal_80.1;source_gene=hg002_chrY_paternal_80;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_80;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_80.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_80.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=hg002_chrY_paternal_80.1,hg002_chrY_paternal_80.1;transcript_id=HG03009_ch_T0000181;gene_id=HG03009_ch_G0000049;Parent=HG03009_ch_T0000181;transcript_name=hg002_chrY_paternal_80.1;gene_name=TTTY1;ID=exon:HG03009_ch_T0000181:2;Name=TTTY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6018617	6020972	.	+	.	source_transcript=hg002_chrY_paternal_80.1;source_transcript_name=hg002_chrY_paternal_80.1;source_gene=hg002_chrY_paternal_80;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_80;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_80.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_80.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=hg002_chrY_paternal_80.1,hg002_chrY_paternal_80.1;transcript_id=HG03009_ch_T0000181;gene_id=HG03009_ch_G0000049;Parent=HG03009_ch_T0000181;transcript_name=hg002_chrY_paternal_80.1;gene_name=TTTY1;ID=intron:HG03009_ch_T0000181:2;Name=TTTY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6020973	6021110	.	+	.	source_transcript=hg002_chrY_paternal_80.1;source_transcript_name=hg002_chrY_paternal_80.1;source_gene=hg002_chrY_paternal_80;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_80;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_80.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_80.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=hg002_chrY_paternal_80.1,hg002_chrY_paternal_80.1;transcript_id=HG03009_ch_T0000181;gene_id=HG03009_ch_G0000049;Parent=HG03009_ch_T0000181;transcript_name=hg002_chrY_paternal_80.1;gene_name=TTTY1;ID=exon:HG03009_ch_T0000181:3;Name=TTTY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6021111	6028691	.	+	.	source_transcript=hg002_chrY_paternal_80.1;source_transcript_name=hg002_chrY_paternal_80.1;source_gene=hg002_chrY_paternal_80;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_80;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_80.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_80.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=hg002_chrY_paternal_80.1,hg002_chrY_paternal_80.1;transcript_id=HG03009_ch_T0000181;gene_id=HG03009_ch_G0000049;Parent=HG03009_ch_T0000181;transcript_name=hg002_chrY_paternal_80.1;gene_name=TTTY1;ID=intron:HG03009_ch_T0000181:3;Name=TTTY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6028692	6028949	.	+	.	source_transcript=hg002_chrY_paternal_80.1;source_transcript_name=hg002_chrY_paternal_80.1;source_gene=hg002_chrY_paternal_80;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_80;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_80.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_80.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=hg002_chrY_paternal_80.1,hg002_chrY_paternal_80.1;transcript_id=HG03009_ch_T0000181;gene_id=HG03009_ch_G0000049;Parent=HG03009_ch_T0000181;transcript_name=hg002_chrY_paternal_80.1;gene_name=TTTY1;ID=exon:HG03009_ch_T0000181:4;Name=TTTY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	6023629	6045830	.	-	.	source_gene_common_name=TTTY2B;source_gene=hg002_chrY_paternal_81;alternative_source_transcripts=hg002_chrY_paternal_81.1,hg002_chrY_paternal_81.1;gene_id=HG03009_ch_G0000050;gene_biotype=lncRNA;gene_name=TTTY2B;gene_sources=liftoff;ID=HG03009_ch_G0000050;Name=TTTY2B
HG03009_chrY	CAT	transcript	6023629	6045830	1000	-	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1,hg002_chrY_paternal_81.1;transcript_id=HG03009_ch_T0000182;gene_id=HG03009_ch_G0000050;Parent=HG03009_ch_G0000050;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=HG03009_ch_T0000182;Name=TTTY2B
HG03009_chrY	CAT	exon	6023629	6024308	.	-	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1,hg002_chrY_paternal_81.1;transcript_id=HG03009_ch_T0000182;gene_id=HG03009_ch_G0000050;Parent=HG03009_ch_T0000182;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=exon:HG03009_ch_T0000182:0;Name=TTTY2B;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6024309	6025531	.	-	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1,hg002_chrY_paternal_81.1;transcript_id=HG03009_ch_T0000182;gene_id=HG03009_ch_G0000050;Parent=HG03009_ch_T0000182;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=intron:HG03009_ch_T0000182:0;Name=TTTY2B;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6025532	6025729	.	-	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1,hg002_chrY_paternal_81.1;transcript_id=HG03009_ch_T0000182;gene_id=HG03009_ch_G0000050;Parent=HG03009_ch_T0000182;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=exon:HG03009_ch_T0000182:1;Name=TTTY2B;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6025730	6025849	.	-	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1,hg002_chrY_paternal_81.1;transcript_id=HG03009_ch_T0000182;gene_id=HG03009_ch_G0000050;Parent=HG03009_ch_T0000182;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=intron:HG03009_ch_T0000182:1;Name=TTTY2B;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6025850	6025928	.	-	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1,hg002_chrY_paternal_81.1;transcript_id=HG03009_ch_T0000182;gene_id=HG03009_ch_G0000050;Parent=HG03009_ch_T0000182;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=exon:HG03009_ch_T0000182:2;Name=TTTY2B;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6025929	6028758	.	-	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1,hg002_chrY_paternal_81.1;transcript_id=HG03009_ch_T0000182;gene_id=HG03009_ch_G0000050;Parent=HG03009_ch_T0000182;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=intron:HG03009_ch_T0000182:2;Name=TTTY2B;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6028759	6028915	.	-	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1,hg002_chrY_paternal_81.1;transcript_id=HG03009_ch_T0000182;gene_id=HG03009_ch_G0000050;Parent=HG03009_ch_T0000182;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=exon:HG03009_ch_T0000182:3;Name=TTTY2B;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6028916	6029607	.	-	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1,hg002_chrY_paternal_81.1;transcript_id=HG03009_ch_T0000182;gene_id=HG03009_ch_G0000050;Parent=HG03009_ch_T0000182;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=intron:HG03009_ch_T0000182:3;Name=TTTY2B;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6029608	6029756	.	-	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1,hg002_chrY_paternal_81.1;transcript_id=HG03009_ch_T0000182;gene_id=HG03009_ch_G0000050;Parent=HG03009_ch_T0000182;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=exon:HG03009_ch_T0000182:4;Name=TTTY2B;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6029757	6037150	.	-	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1,hg002_chrY_paternal_81.1;transcript_id=HG03009_ch_T0000182;gene_id=HG03009_ch_G0000050;Parent=HG03009_ch_T0000182;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=intron:HG03009_ch_T0000182:4;Name=TTTY2B;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6037151	6037237	.	-	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1,hg002_chrY_paternal_81.1;transcript_id=HG03009_ch_T0000182;gene_id=HG03009_ch_G0000050;Parent=HG03009_ch_T0000182;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=exon:HG03009_ch_T0000182:5;Name=TTTY2B;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6037238	6039713	.	-	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1,hg002_chrY_paternal_81.1;transcript_id=HG03009_ch_T0000182;gene_id=HG03009_ch_G0000050;Parent=HG03009_ch_T0000182;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=intron:HG03009_ch_T0000182:5;Name=TTTY2B;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6039714	6039791	.	-	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1,hg002_chrY_paternal_81.1;transcript_id=HG03009_ch_T0000182;gene_id=HG03009_ch_G0000050;Parent=HG03009_ch_T0000182;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=exon:HG03009_ch_T0000182:6;Name=TTTY2B;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6039792	6045625	.	-	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1,hg002_chrY_paternal_81.1;transcript_id=HG03009_ch_T0000182;gene_id=HG03009_ch_G0000050;Parent=HG03009_ch_T0000182;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=intron:HG03009_ch_T0000182:6;Name=TTTY2B;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6045626	6045830	.	-	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1,hg002_chrY_paternal_81.1;transcript_id=HG03009_ch_T0000182;gene_id=HG03009_ch_G0000050;Parent=HG03009_ch_T0000182;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=exon:HG03009_ch_T0000182:7;Name=TTTY2B;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	6060822	6064465	.	+	.	source_gene_common_name=TTTY21B;source_gene=hg002_chrY_paternal_82;alternative_source_transcripts=hg002_chrY_paternal_82.1,hg002_chrY_paternal_82.1;gene_id=HG03009_ch_G0000051;gene_biotype=lncRNA;gene_name=TTTY21B;gene_sources=liftoff;ID=HG03009_ch_G0000051;Name=TTTY21B
HG03009_chrY	CAT	transcript	6060822	6064465	1000	+	.	source_transcript=hg002_chrY_paternal_82.1;source_transcript_name=hg002_chrY_paternal_82.1;source_gene=hg002_chrY_paternal_82;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_82;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_82.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_82.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY21B;alternative_source_transcripts=hg002_chrY_paternal_82.1,hg002_chrY_paternal_82.1;transcript_id=HG03009_ch_T0000183;gene_id=HG03009_ch_G0000051;Parent=HG03009_ch_G0000051;transcript_name=hg002_chrY_paternal_82.1;gene_name=TTTY21B;ID=HG03009_ch_T0000183;Name=TTTY21B
HG03009_chrY	CAT	exon	6060822	6061023	.	+	.	source_transcript=hg002_chrY_paternal_82.1;source_transcript_name=hg002_chrY_paternal_82.1;source_gene=hg002_chrY_paternal_82;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_82;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_82.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_82.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY21B;alternative_source_transcripts=hg002_chrY_paternal_82.1,hg002_chrY_paternal_82.1;transcript_id=HG03009_ch_T0000183;gene_id=HG03009_ch_G0000051;Parent=HG03009_ch_T0000183;transcript_name=hg002_chrY_paternal_82.1;gene_name=TTTY21B;ID=exon:HG03009_ch_T0000183:0;Name=TTTY21B;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6061024	6064360	.	+	.	source_transcript=hg002_chrY_paternal_82.1;source_transcript_name=hg002_chrY_paternal_82.1;source_gene=hg002_chrY_paternal_82;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_82;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_82.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_82.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY21B;alternative_source_transcripts=hg002_chrY_paternal_82.1,hg002_chrY_paternal_82.1;transcript_id=HG03009_ch_T0000183;gene_id=HG03009_ch_G0000051;Parent=HG03009_ch_T0000183;transcript_name=hg002_chrY_paternal_82.1;gene_name=TTTY21B;ID=intron:HG03009_ch_T0000183:0;Name=TTTY21B;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6064361	6064465	.	+	.	source_transcript=hg002_chrY_paternal_82.1;source_transcript_name=hg002_chrY_paternal_82.1;source_gene=hg002_chrY_paternal_82;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_82;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_82.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_82.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY21B;alternative_source_transcripts=hg002_chrY_paternal_82.1,hg002_chrY_paternal_82.1;transcript_id=HG03009_ch_T0000183;gene_id=HG03009_ch_G0000051;Parent=HG03009_ch_T0000183;transcript_name=hg002_chrY_paternal_82.1;gene_name=TTTY21B;ID=exon:HG03009_ch_T0000183:1;Name=TTTY21B;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	6066856	6075294	.	+	.	source_gene_common_name=TTTY7;source_gene=hg002_chrY_paternal_83;alternative_source_transcripts=hg002_chrY_paternal_83.1,hg002_chrY_paternal_83.1;gene_id=HG03009_ch_G0000052;gene_biotype=lncRNA;gene_name=TTTY7;gene_sources=liftoff;ID=HG03009_ch_G0000052;Name=TTTY7
HG03009_chrY	CAT	transcript	6066856	6075294	1000	+	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=hg002_chrY_paternal_83.1,hg002_chrY_paternal_83.1;transcript_id=HG03009_ch_T0000184;gene_id=HG03009_ch_G0000052;Parent=HG03009_ch_G0000052;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=HG03009_ch_T0000184;Name=TTTY7
HG03009_chrY	CAT	exon	6066856	6066892	.	+	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=hg002_chrY_paternal_83.1,hg002_chrY_paternal_83.1;transcript_id=HG03009_ch_T0000184;gene_id=HG03009_ch_G0000052;Parent=HG03009_ch_T0000184;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=exon:HG03009_ch_T0000184:0;Name=TTTY7;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6066893	6067833	.	+	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=hg002_chrY_paternal_83.1,hg002_chrY_paternal_83.1;transcript_id=HG03009_ch_T0000184;gene_id=HG03009_ch_G0000052;Parent=HG03009_ch_T0000184;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=intron:HG03009_ch_T0000184:0;Name=TTTY7;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6067834	6067995	.	+	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=hg002_chrY_paternal_83.1,hg002_chrY_paternal_83.1;transcript_id=HG03009_ch_T0000184;gene_id=HG03009_ch_G0000052;Parent=HG03009_ch_T0000184;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=exon:HG03009_ch_T0000184:1;Name=TTTY7;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6067996	6070302	.	+	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=hg002_chrY_paternal_83.1,hg002_chrY_paternal_83.1;transcript_id=HG03009_ch_T0000184;gene_id=HG03009_ch_G0000052;Parent=HG03009_ch_T0000184;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=intron:HG03009_ch_T0000184:1;Name=TTTY7;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6070303	6070377	.	+	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=hg002_chrY_paternal_83.1,hg002_chrY_paternal_83.1;transcript_id=HG03009_ch_T0000184;gene_id=HG03009_ch_G0000052;Parent=HG03009_ch_T0000184;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=exon:HG03009_ch_T0000184:2;Name=TTTY7;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6070378	6071065	.	+	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=hg002_chrY_paternal_83.1,hg002_chrY_paternal_83.1;transcript_id=HG03009_ch_T0000184;gene_id=HG03009_ch_G0000052;Parent=HG03009_ch_T0000184;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=intron:HG03009_ch_T0000184:2;Name=TTTY7;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6071066	6071542	.	+	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=hg002_chrY_paternal_83.1,hg002_chrY_paternal_83.1;transcript_id=HG03009_ch_T0000184;gene_id=HG03009_ch_G0000052;Parent=HG03009_ch_T0000184;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=exon:HG03009_ch_T0000184:3;Name=TTTY7;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6071543	6073459	.	+	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=hg002_chrY_paternal_83.1,hg002_chrY_paternal_83.1;transcript_id=HG03009_ch_T0000184;gene_id=HG03009_ch_G0000052;Parent=HG03009_ch_T0000184;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=intron:HG03009_ch_T0000184:3;Name=TTTY7;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6073460	6073573	.	+	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=hg002_chrY_paternal_83.1,hg002_chrY_paternal_83.1;transcript_id=HG03009_ch_T0000184;gene_id=HG03009_ch_G0000052;Parent=HG03009_ch_T0000184;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=exon:HG03009_ch_T0000184:4;Name=TTTY7;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6073574	6074546	.	+	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=hg002_chrY_paternal_83.1,hg002_chrY_paternal_83.1;transcript_id=HG03009_ch_T0000184;gene_id=HG03009_ch_G0000052;Parent=HG03009_ch_T0000184;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=intron:HG03009_ch_T0000184:4;Name=TTTY7;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6074547	6074802	.	+	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=hg002_chrY_paternal_83.1,hg002_chrY_paternal_83.1;transcript_id=HG03009_ch_T0000184;gene_id=HG03009_ch_G0000052;Parent=HG03009_ch_T0000184;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=exon:HG03009_ch_T0000184:5;Name=TTTY7;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6074803	6075048	.	+	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=hg002_chrY_paternal_83.1,hg002_chrY_paternal_83.1;transcript_id=HG03009_ch_T0000184;gene_id=HG03009_ch_G0000052;Parent=HG03009_ch_T0000184;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=intron:HG03009_ch_T0000184:5;Name=TTTY7;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6075049	6075294	.	+	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=hg002_chrY_paternal_83.1,hg002_chrY_paternal_83.1;transcript_id=HG03009_ch_T0000184;gene_id=HG03009_ch_G0000052;Parent=HG03009_ch_T0000184;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=exon:HG03009_ch_T0000184:6;Name=TTTY7;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	6088414	6091013	.	-	.	source_gene_common_name=TTTY8B;source_gene=hg002_chrY_paternal_84;alternative_source_transcripts=hg002_chrY_paternal_84.1,hg002_chrY_paternal_84.1;gene_id=HG03009_ch_G0000053;gene_biotype=lncRNA;gene_name=TTTY8B;gene_sources=liftoff;ID=HG03009_ch_G0000053;Name=TTTY8B
HG03009_chrY	CAT	transcript	6088414	6091013	1000	-	.	source_transcript=hg002_chrY_paternal_84.1;source_transcript_name=hg002_chrY_paternal_84.1;source_gene=hg002_chrY_paternal_84;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_84;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_84.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_84.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=hg002_chrY_paternal_84.1,hg002_chrY_paternal_84.1;transcript_id=HG03009_ch_T0000185;gene_id=HG03009_ch_G0000053;Parent=HG03009_ch_G0000053;transcript_name=hg002_chrY_paternal_84.1;gene_name=TTTY8B;ID=HG03009_ch_T0000185;Name=TTTY8B
HG03009_chrY	CAT	exon	6088414	6088603	.	-	.	source_transcript=hg002_chrY_paternal_84.1;source_transcript_name=hg002_chrY_paternal_84.1;source_gene=hg002_chrY_paternal_84;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_84;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_84.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_84.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=hg002_chrY_paternal_84.1,hg002_chrY_paternal_84.1;transcript_id=HG03009_ch_T0000185;gene_id=HG03009_ch_G0000053;Parent=HG03009_ch_T0000185;transcript_name=hg002_chrY_paternal_84.1;gene_name=TTTY8B;ID=exon:HG03009_ch_T0000185:0;Name=TTTY8B;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6088604	6090195	.	-	.	source_transcript=hg002_chrY_paternal_84.1;source_transcript_name=hg002_chrY_paternal_84.1;source_gene=hg002_chrY_paternal_84;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_84;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_84.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_84.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=hg002_chrY_paternal_84.1,hg002_chrY_paternal_84.1;transcript_id=HG03009_ch_T0000185;gene_id=HG03009_ch_G0000053;Parent=HG03009_ch_T0000185;transcript_name=hg002_chrY_paternal_84.1;gene_name=TTTY8B;ID=intron:HG03009_ch_T0000185:0;Name=TTTY8B;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6090196	6090400	.	-	.	source_transcript=hg002_chrY_paternal_84.1;source_transcript_name=hg002_chrY_paternal_84.1;source_gene=hg002_chrY_paternal_84;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_84;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_84.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_84.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=hg002_chrY_paternal_84.1,hg002_chrY_paternal_84.1;transcript_id=HG03009_ch_T0000185;gene_id=HG03009_ch_G0000053;Parent=HG03009_ch_T0000185;transcript_name=hg002_chrY_paternal_84.1;gene_name=TTTY8B;ID=exon:HG03009_ch_T0000185:1;Name=TTTY8B;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6090401	6090877	.	-	.	source_transcript=hg002_chrY_paternal_84.1;source_transcript_name=hg002_chrY_paternal_84.1;source_gene=hg002_chrY_paternal_84;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_84;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_84.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_84.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=hg002_chrY_paternal_84.1,hg002_chrY_paternal_84.1;transcript_id=HG03009_ch_T0000185;gene_id=HG03009_ch_G0000053;Parent=HG03009_ch_T0000185;transcript_name=hg002_chrY_paternal_84.1;gene_name=TTTY8B;ID=intron:HG03009_ch_T0000185:1;Name=TTTY8B;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6090878	6091013	.	-	.	source_transcript=hg002_chrY_paternal_84.1;source_transcript_name=hg002_chrY_paternal_84.1;source_gene=hg002_chrY_paternal_84;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_84;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_84.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_84.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=hg002_chrY_paternal_84.1,hg002_chrY_paternal_84.1;transcript_id=HG03009_ch_T0000185;gene_id=HG03009_ch_G0000053;Parent=HG03009_ch_T0000185;transcript_name=hg002_chrY_paternal_84.1;gene_name=TTTY8B;ID=exon:HG03009_ch_T0000185:2;Name=TTTY8B;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	6483312	6529144	.	-	.	source_gene_common_name=AMELY;source_gene=hg002_chrY_paternal_88;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;gene_id=HG03009_ch_G0000054;gene_biotype=protein_coding;gene_name=AMELY;gene_sources=liftoff,augTM;ID=HG03009_ch_G0000054;Name=AMELY
HG03009_chrY	CAT	transcript	6483312	6491421	100	-	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000186;gene_id=HG03009_ch_G0000054;Parent=HG03009_ch_G0000054;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=HG03009_ch_T0000186;Name=AMELY
HG03009_chrY	CAT	exon	6483312	6483472	.	-	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000186;gene_id=HG03009_ch_G0000054;Parent=HG03009_ch_T0000186;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:HG03009_ch_T0000186:0;Name=AMELY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6483467	6483472	.	-	0	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000186;gene_id=HG03009_ch_G0000054;Parent=HG03009_ch_T0000186;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=CDS:HG03009_ch_T0000186:0;Name=AMELY;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	6483467	6483469	.	-	0	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000186;gene_id=HG03009_ch_G0000054;Parent=HG03009_ch_T0000186;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=stop_codon:HG03009_ch_T0000186;Name=AMELY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6483473	6485430	.	-	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000186;gene_id=HG03009_ch_G0000054;Parent=HG03009_ch_T0000186;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=intron:HG03009_ch_T0000186:0;Name=AMELY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6485431	6485856	.	-	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000186;gene_id=HG03009_ch_G0000054;Parent=HG03009_ch_T0000186;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:HG03009_ch_T0000186:1;Name=AMELY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6485431	6485856	.	-	0	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000186;gene_id=HG03009_ch_G0000054;Parent=HG03009_ch_T0000186;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=CDS:HG03009_ch_T0000186:1;Name=AMELY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6485857	6486125	.	-	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000186;gene_id=HG03009_ch_G0000054;Parent=HG03009_ch_T0000186;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=intron:HG03009_ch_T0000186:1;Name=AMELY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6486126	6486170	.	-	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000186;gene_id=HG03009_ch_G0000054;Parent=HG03009_ch_T0000186;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:HG03009_ch_T0000186:2;Name=AMELY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6486126	6486170	.	-	0	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000186;gene_id=HG03009_ch_G0000054;Parent=HG03009_ch_T0000186;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=CDS:HG03009_ch_T0000186:2;Name=AMELY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6486171	6486261	.	-	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000186;gene_id=HG03009_ch_G0000054;Parent=HG03009_ch_T0000186;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=intron:HG03009_ch_T0000186:2;Name=AMELY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6486262	6486303	.	-	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000186;gene_id=HG03009_ch_G0000054;Parent=HG03009_ch_T0000186;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:HG03009_ch_T0000186:3;Name=AMELY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6486262	6486303	.	-	0	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000186;gene_id=HG03009_ch_G0000054;Parent=HG03009_ch_T0000186;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=CDS:HG03009_ch_T0000186:3;Name=AMELY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6486304	6487399	.	-	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000186;gene_id=HG03009_ch_G0000054;Parent=HG03009_ch_T0000186;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=intron:HG03009_ch_T0000186:3;Name=AMELY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6487400	6487447	.	-	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000186;gene_id=HG03009_ch_G0000054;Parent=HG03009_ch_T0000186;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:HG03009_ch_T0000186:4;Name=AMELY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6487400	6487447	.	-	0	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000186;gene_id=HG03009_ch_G0000054;Parent=HG03009_ch_T0000186;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=CDS:HG03009_ch_T0000186:4;Name=AMELY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6487448	6489948	.	-	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000186;gene_id=HG03009_ch_G0000054;Parent=HG03009_ch_T0000186;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=intron:HG03009_ch_T0000186:4;Name=AMELY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6489949	6490014	.	-	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000186;gene_id=HG03009_ch_G0000054;Parent=HG03009_ch_T0000186;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:HG03009_ch_T0000186:5;Name=AMELY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6489949	6490002	.	-	0	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000186;gene_id=HG03009_ch_G0000054;Parent=HG03009_ch_T0000186;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=CDS:HG03009_ch_T0000186:5;Name=AMELY;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	6490000	6490002	.	-	0	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000186;gene_id=HG03009_ch_G0000054;Parent=HG03009_ch_T0000186;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=start_codon:HG03009_ch_T0000186;Name=AMELY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6490015	6491365	.	-	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000186;gene_id=HG03009_ch_G0000054;Parent=HG03009_ch_T0000186;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=intron:HG03009_ch_T0000186:5;Name=AMELY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6491366	6491421	.	-	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000186;gene_id=HG03009_ch_G0000054;Parent=HG03009_ch_T0000186;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:HG03009_ch_T0000186:6;Name=AMELY;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	6483312	6529144	100	-	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000187;gene_id=HG03009_ch_G0000054;Parent=HG03009_ch_G0000054;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=HG03009_ch_T0000187;Name=AMELY
HG03009_chrY	CAT	exon	6483312	6483472	.	-	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000187;gene_id=HG03009_ch_G0000054;Parent=HG03009_ch_T0000187;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:HG03009_ch_T0000187:0;Name=AMELY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6483467	6483472	.	-	0	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000187;gene_id=HG03009_ch_G0000054;Parent=HG03009_ch_T0000187;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=CDS:HG03009_ch_T0000187:0;Name=AMELY;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	6483467	6483469	.	-	0	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000187;gene_id=HG03009_ch_G0000054;Parent=HG03009_ch_T0000187;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=stop_codon:HG03009_ch_T0000187;Name=AMELY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6483473	6485430	.	-	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000187;gene_id=HG03009_ch_G0000054;Parent=HG03009_ch_T0000187;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=intron:HG03009_ch_T0000187:0;Name=AMELY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6485431	6485856	.	-	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000187;gene_id=HG03009_ch_G0000054;Parent=HG03009_ch_T0000187;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:HG03009_ch_T0000187:1;Name=AMELY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6485431	6485856	.	-	0	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000187;gene_id=HG03009_ch_G0000054;Parent=HG03009_ch_T0000187;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=CDS:HG03009_ch_T0000187:1;Name=AMELY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6485857	6486125	.	-	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000187;gene_id=HG03009_ch_G0000054;Parent=HG03009_ch_T0000187;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=intron:HG03009_ch_T0000187:1;Name=AMELY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6486126	6486170	.	-	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000187;gene_id=HG03009_ch_G0000054;Parent=HG03009_ch_T0000187;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:HG03009_ch_T0000187:2;Name=AMELY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6486126	6486170	.	-	0	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000187;gene_id=HG03009_ch_G0000054;Parent=HG03009_ch_T0000187;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=CDS:HG03009_ch_T0000187:2;Name=AMELY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6486171	6487399	.	-	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000187;gene_id=HG03009_ch_G0000054;Parent=HG03009_ch_T0000187;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=intron:HG03009_ch_T0000187:2;Name=AMELY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6487400	6487447	.	-	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000187;gene_id=HG03009_ch_G0000054;Parent=HG03009_ch_T0000187;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:HG03009_ch_T0000187:3;Name=AMELY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6487400	6487447	.	-	0	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000187;gene_id=HG03009_ch_G0000054;Parent=HG03009_ch_T0000187;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=CDS:HG03009_ch_T0000187:3;Name=AMELY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6487448	6489948	.	-	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000187;gene_id=HG03009_ch_G0000054;Parent=HG03009_ch_T0000187;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=intron:HG03009_ch_T0000187:3;Name=AMELY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6489949	6490014	.	-	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000187;gene_id=HG03009_ch_G0000054;Parent=HG03009_ch_T0000187;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:HG03009_ch_T0000187:4;Name=AMELY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6489949	6490002	.	-	0	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000187;gene_id=HG03009_ch_G0000054;Parent=HG03009_ch_T0000187;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=CDS:HG03009_ch_T0000187:4;Name=AMELY;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	6490000	6490002	.	-	0	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000187;gene_id=HG03009_ch_G0000054;Parent=HG03009_ch_T0000187;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=start_codon:HG03009_ch_T0000187;Name=AMELY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6490015	6491365	.	-	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000187;gene_id=HG03009_ch_G0000054;Parent=HG03009_ch_T0000187;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=intron:HG03009_ch_T0000187:4;Name=AMELY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6491366	6491465	.	-	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000187;gene_id=HG03009_ch_G0000054;Parent=HG03009_ch_T0000187;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:HG03009_ch_T0000187:5;Name=AMELY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6491466	6529064	.	-	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000187;gene_id=HG03009_ch_G0000054;Parent=HG03009_ch_T0000187;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=intron:HG03009_ch_T0000187:5;Name=AMELY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6529065	6529144	.	-	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000187;gene_id=HG03009_ch_G0000054;Parent=HG03009_ch_T0000187;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:HG03009_ch_T0000187:6;Name=AMELY;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	6527257	6723076	.	+	.	source_gene_common_name=TBL1Y;source_gene=hg002_chrY_paternal_90;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;gene_id=HG03009_ch_G0000055;gene_biotype=protein_coding;gene_name=TBL1Y;gene_sources=liftoff,augTM;ID=HG03009_ch_G0000055;Name=TBL1Y
HG03009_chrY	CAT	transcript	6527257	6723076	100	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000188;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_G0000055;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=HG03009_ch_T0000188;Name=TBL1Y
HG03009_chrY	CAT	exon	6527257	6527495	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000188;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000188:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6527496	6529479	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000188;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000188:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6529480	6529564	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000188;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000188:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6529565	6595601	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000188;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000188:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6595602	6595632	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000188;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000188:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6595633	6613192	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000188;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000188:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6613193	6613287	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000188;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000188:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6613288	6638836	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000188;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000188:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6638837	6638925	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000188;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000188:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6638926	6642422	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000188;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000188:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6642423	6642530	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000188;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000188:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6642473	6642530	.	+	0	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000188;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000188:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	6642473	6642475	.	+	0	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000188;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=start_codon:HG03009_ch_T0000188;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6642531	6660366	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000188;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000188:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6660367	6660512	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000188;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000188:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6660367	6660512	.	+	2	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000188;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000188:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6660513	6681287	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000188;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000188:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6681288	6681540	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000188;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000188:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6681288	6681540	.	+	0	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000188;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000188:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6681541	6687586	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000188;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000188:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6687587	6687719	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000188;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000188:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6687587	6687719	.	+	2	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000188;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000188:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6687720	6688110	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000188;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000188:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6688111	6688252	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000188;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000188:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6688111	6688252	.	+	1	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000188;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000188:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6688253	6688950	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000188;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000188:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6688951	6689014	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000188;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000188:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6688951	6689014	.	+	0	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000188;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000188:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6689015	6689123	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000188;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000188:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6689124	6689221	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000188;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000188:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6689124	6689221	.	+	2	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000188;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000188:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6689222	6691950	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000188;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000188:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6691951	6692011	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000188;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000188:12;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6691951	6692011	.	+	0	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000188;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000188:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6692012	6698121	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000188;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000188:12;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6698122	6698243	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000188;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000188:13;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6698122	6698243	.	+	2	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000188;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000188:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6698244	6703285	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000188;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000188:13;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6703286	6703360	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000188;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000188:14;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6703286	6703360	.	+	0	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000188;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000188:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6703361	6703677	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000188;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000188:14;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6703678	6703805	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000188;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000188:15;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6703678	6703805	.	+	0	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000188;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000188:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6703806	6704654	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000188;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000188:15;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6704655	6704820	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000188;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000188:16;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6704655	6704820	.	+	1	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000188;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000188:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6704821	6707476	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000188;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000188:16;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6707477	6707578	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000188;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000188:17;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6707477	6707578	.	+	0	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000188;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000188:12;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6707579	6718172	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000188;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000188:17;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6718173	6723076	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000188;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000188:18;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6718173	6718358	.	+	0	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000188;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000188:13;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	6718356	6718358	.	+	0	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000188;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=stop_codon:HG03009_ch_T0000188;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	6528089	6723076	100	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000189;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_G0000055;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=HG03009_ch_T0000189;Name=TBL1Y
HG03009_chrY	CAT	exon	6528089	6528374	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000189;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000189:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6528375	6529479	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000189;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000189:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6529480	6529564	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000189;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000189:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6529565	6595601	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000189;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000189:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6595602	6595632	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000189;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000189:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6595633	6613192	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000189;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000189:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6613193	6613287	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000189;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000189:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6613288	6638836	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000189;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000189:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6638837	6638925	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000189;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000189:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6638926	6642422	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000189;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000189:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6642423	6642530	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000189;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000189:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6642473	6642530	.	+	0	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000189;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000189:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	6642473	6642475	.	+	0	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000189;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=start_codon:HG03009_ch_T0000189;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6642531	6660366	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000189;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000189:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6660367	6660512	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000189;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000189:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6660367	6660512	.	+	2	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000189;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000189:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6660513	6681287	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000189;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000189:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6681288	6681540	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000189;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000189:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6681288	6681540	.	+	0	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000189;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000189:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6681541	6687586	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000189;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000189:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6687587	6687719	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000189;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000189:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6687587	6687719	.	+	2	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000189;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000189:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6687720	6688110	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000189;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000189:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6688111	6688252	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000189;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000189:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6688111	6688252	.	+	1	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000189;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000189:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6688253	6688950	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000189;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000189:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6688951	6689014	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000189;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000189:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6688951	6689014	.	+	0	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000189;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000189:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6689015	6689123	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000189;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000189:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6689124	6689221	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000189;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000189:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6689124	6689221	.	+	2	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000189;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000189:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6689222	6691950	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000189;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000189:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6691951	6692011	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000189;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000189:12;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6691951	6692011	.	+	0	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000189;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000189:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6692012	6698121	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000189;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000189:12;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6698122	6698243	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000189;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000189:13;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6698122	6698243	.	+	2	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000189;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000189:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6698244	6703285	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000189;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000189:13;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6703286	6703360	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000189;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000189:14;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6703286	6703360	.	+	0	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000189;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000189:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6703361	6703677	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000189;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000189:14;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6703678	6703805	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000189;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000189:15;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6703678	6703805	.	+	0	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000189;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000189:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6703806	6704654	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000189;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000189:15;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6704655	6704820	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000189;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000189:16;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6704655	6704820	.	+	1	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000189;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000189:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6704821	6707476	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000189;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000189:16;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6707477	6707578	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000189;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000189:17;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6707477	6707578	.	+	0	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000189;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000189:12;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6707579	6718172	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000189;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000189:17;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6718173	6723076	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000189;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000189:18;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6718173	6718358	.	+	0	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000189;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000189:13;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	6718356	6718358	.	+	0	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000189;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=stop_codon:HG03009_ch_T0000189;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	6528089	6723076	100	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000190;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_G0000055;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=HG03009_ch_T0000190;Name=TBL1Y
HG03009_chrY	CAT	exon	6528089	6528374	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000190;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000190:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6528375	6529479	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000190;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000190:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6529480	6529564	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000190;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000190:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6529565	6595601	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000190;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000190:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6595602	6595632	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000190;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000190:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6595633	6638836	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000190;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000190:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6638837	6638925	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000190;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000190:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6638926	6642422	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000190;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000190:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6642423	6642530	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000190;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000190:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6642473	6642530	.	+	0	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000190;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000190:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	6642473	6642475	.	+	0	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000190;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=start_codon:HG03009_ch_T0000190;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6642531	6660366	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000190;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000190:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6660367	6660512	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000190;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000190:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6660367	6660512	.	+	2	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000190;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000190:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6660513	6681287	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000190;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000190:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6681288	6681540	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000190;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000190:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6681288	6681540	.	+	0	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000190;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000190:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6681541	6687586	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000190;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000190:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6687587	6687719	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000190;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000190:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6687587	6687719	.	+	2	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000190;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000190:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6687720	6688110	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000190;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000190:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6688111	6688252	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000190;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000190:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6688111	6688252	.	+	1	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000190;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000190:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6688253	6688950	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000190;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000190:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6688951	6689014	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000190;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000190:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6688951	6689014	.	+	0	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000190;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000190:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6689015	6689123	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000190;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000190:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6689124	6689221	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000190;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000190:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6689124	6689221	.	+	2	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000190;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000190:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6689222	6691950	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000190;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000190:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6691951	6692011	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000190;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000190:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6691951	6692011	.	+	0	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000190;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000190:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6692012	6698121	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000190;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000190:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6698122	6698243	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000190;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000190:12;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6698122	6698243	.	+	2	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000190;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000190:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6698244	6703285	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000190;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000190:12;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6703286	6703360	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000190;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000190:13;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6703286	6703360	.	+	0	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000190;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000190:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6703361	6703677	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000190;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000190:13;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6703678	6703805	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000190;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000190:14;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6703678	6703805	.	+	0	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000190;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000190:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6703806	6704654	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000190;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000190:14;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6704655	6704820	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000190;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000190:15;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6704655	6704820	.	+	1	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000190;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000190:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6704821	6707476	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000190;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000190:15;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6707477	6707578	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000190;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000190:16;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6707477	6707578	.	+	0	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000190;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000190:12;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6707579	6718172	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000190;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000190:16;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6718173	6723076	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000190;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000190:17;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6718173	6718358	.	+	0	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000190;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000190:13;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	6718356	6718358	.	+	0	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000190;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=stop_codon:HG03009_ch_T0000190;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	6528089	6709071	100	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000191;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_G0000055;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=HG03009_ch_T0000191;Name=TBL1Y
HG03009_chrY	CAT	exon	6528089	6528374	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000191;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000191:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6528375	6529479	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000191;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000191:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6529480	6529564	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000191;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000191:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6529565	6595601	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000191;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000191:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6595602	6595632	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000191;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000191:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6595633	6613192	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000191;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000191:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6613193	6613287	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000191;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000191:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6613288	6638836	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000191;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000191:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6638837	6638925	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000191;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000191:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6638926	6642422	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000191;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000191:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6642423	6642530	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000191;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000191:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6642473	6642530	.	+	0	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000191;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000191:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	6642473	6642475	.	+	0	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000191;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=start_codon:HG03009_ch_T0000191;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6642531	6660366	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000191;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000191:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6660367	6660512	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000191;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000191:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6660367	6660512	.	+	2	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000191;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000191:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6660513	6681287	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000191;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000191:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6681288	6681540	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000191;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000191:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6681288	6681540	.	+	0	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000191;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000191:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6681541	6687586	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000191;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000191:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6687587	6687719	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000191;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000191:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6687587	6687719	.	+	2	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000191;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000191:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6687720	6688110	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000191;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000191:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6688111	6688252	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000191;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000191:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6688111	6688252	.	+	1	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000191;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000191:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6688253	6688950	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000191;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000191:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6688951	6689014	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000191;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000191:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6688951	6689014	.	+	0	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000191;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000191:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6689015	6689123	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000191;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000191:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6689124	6689221	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000191;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000191:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6689124	6689221	.	+	2	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000191;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000191:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6689222	6691950	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000191;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000191:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6691951	6692011	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000191;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000191:12;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6691951	6692011	.	+	0	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000191;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000191:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6692012	6698121	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000191;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000191:12;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6698122	6698243	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000191;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000191:13;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6698122	6698243	.	+	2	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000191;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000191:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6698244	6703285	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000191;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000191:13;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6703286	6703360	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000191;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000191:14;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6703286	6703360	.	+	0	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000191;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000191:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6703361	6703677	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000191;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000191:14;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6703678	6703805	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000191;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000191:15;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6703678	6703805	.	+	0	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000191;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000191:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6703806	6704654	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000191;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000191:15;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6704655	6704820	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000191;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000191:16;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6704655	6704820	.	+	1	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000191;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000191:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6704821	6707476	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000191;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000191:16;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6707477	6707578	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000191;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000191:17;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6707477	6707578	.	+	0	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000191;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000191:12;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6707579	6708859	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000191;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000191:17;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6708860	6709071	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000191;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000191:18;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6708860	6708880	.	+	0	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000191;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000191:13;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	6708878	6708880	.	+	0	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000191;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=stop_codon:HG03009_ch_T0000191;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	6528089	6709071	100	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000192;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_G0000055;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=HG03009_ch_T0000192;Name=TBL1Y
HG03009_chrY	CAT	exon	6528089	6528374	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000192;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000192:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6528375	6529479	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000192;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000192:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6529480	6529564	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000192;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000192:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6529565	6613192	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000192;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000192:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6613193	6613287	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000192;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000192:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6613288	6638836	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000192;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000192:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6638837	6638925	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000192;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000192:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6638926	6642422	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000192;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000192:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6642423	6642530	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000192;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000192:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6642473	6642530	.	+	0	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000192;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000192:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	6642473	6642475	.	+	0	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000192;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=start_codon:HG03009_ch_T0000192;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6642531	6660366	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000192;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000192:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6660367	6660512	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000192;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000192:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6660367	6660512	.	+	2	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000192;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000192:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6660513	6681287	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000192;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000192:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6681288	6681540	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000192;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000192:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6681288	6681540	.	+	0	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000192;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000192:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6681541	6687586	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000192;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000192:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6687587	6687719	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000192;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000192:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6687587	6687719	.	+	2	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000192;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000192:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6687720	6688110	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000192;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000192:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6688111	6688252	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000192;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000192:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6688111	6688252	.	+	1	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000192;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000192:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6688253	6688950	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000192;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000192:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6688951	6689014	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000192;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000192:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6688951	6689014	.	+	0	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000192;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000192:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6689015	6689123	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000192;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000192:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6689124	6689221	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000192;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000192:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6689124	6689221	.	+	2	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000192;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000192:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6689222	6691950	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000192;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000192:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6691951	6692011	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000192;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000192:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6691951	6692011	.	+	0	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000192;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000192:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6692012	6698121	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000192;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000192:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6698122	6698243	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000192;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000192:12;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6698122	6698243	.	+	2	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000192;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000192:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6698244	6703285	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000192;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000192:12;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6703286	6703360	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000192;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000192:13;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6703286	6703360	.	+	0	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000192;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000192:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6703361	6703677	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000192;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000192:13;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6703678	6703805	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000192;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000192:14;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6703678	6703805	.	+	0	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000192;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000192:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6703806	6704654	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000192;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000192:14;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6704655	6704820	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000192;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000192:15;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6704655	6704820	.	+	1	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000192;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000192:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6704821	6707476	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000192;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000192:15;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6707477	6707578	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000192;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000192:16;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6707477	6707578	.	+	0	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000192;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000192:12;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6707579	6708859	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000192;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000192:16;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6708860	6709071	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000192;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000192:17;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6708860	6708880	.	+	0	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000192;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000192:13;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	6708878	6708880	.	+	0	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000192;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=stop_codon:HG03009_ch_T0000192;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	6528089	6709071	100	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000193;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_G0000055;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=HG03009_ch_T0000193;Name=TBL1Y
HG03009_chrY	CAT	exon	6528089	6528374	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000193;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000193:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6528375	6529479	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000193;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000193:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6529480	6529564	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000193;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000193:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6529565	6595601	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000193;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000193:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6595602	6595632	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000193;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000193:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6595633	6638836	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000193;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000193:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6638837	6638925	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000193;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000193:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6638926	6642422	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000193;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000193:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6642423	6642530	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000193;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000193:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6642473	6642530	.	+	0	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000193;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000193:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	6642473	6642475	.	+	0	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000193;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=start_codon:HG03009_ch_T0000193;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6642531	6660366	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000193;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000193:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6660367	6660512	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000193;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000193:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6660367	6660512	.	+	2	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000193;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000193:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6660513	6681287	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000193;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000193:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6681288	6681540	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000193;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000193:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6681288	6681540	.	+	0	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000193;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000193:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6681541	6687586	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000193;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000193:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6687587	6687719	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000193;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000193:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6687587	6687719	.	+	2	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000193;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000193:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6687720	6688110	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000193;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000193:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6688111	6688252	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000193;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000193:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6688111	6688252	.	+	1	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000193;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000193:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6688253	6688950	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000193;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000193:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6688951	6689014	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000193;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000193:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6688951	6689014	.	+	0	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000193;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000193:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6689015	6689123	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000193;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000193:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6689124	6689221	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000193;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000193:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6689124	6689221	.	+	2	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000193;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000193:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6689222	6691950	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000193;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000193:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6691951	6692011	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000193;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000193:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6691951	6692011	.	+	0	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000193;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000193:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6692012	6698121	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000193;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000193:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6698122	6698243	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000193;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000193:12;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6698122	6698243	.	+	2	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000193;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000193:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6698244	6703285	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000193;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000193:12;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6703286	6703360	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000193;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000193:13;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6703286	6703360	.	+	0	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000193;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000193:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6703361	6703677	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000193;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000193:13;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6703678	6703805	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000193;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000193:14;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6703678	6703805	.	+	0	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000193;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000193:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6703806	6704654	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000193;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000193:14;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6704655	6704820	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000193;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000193:15;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6704655	6704820	.	+	1	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000193;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000193:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6704821	6707476	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000193;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000193:15;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6707477	6707578	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000193;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000193:16;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6707477	6707578	.	+	0	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000193;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000193:12;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6707579	6708859	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000193;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000193:16;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6708860	6709071	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000193;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000193:17;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6708860	6708880	.	+	0	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000193;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000193:13;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	6708878	6708880	.	+	0	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000193;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=stop_codon:HG03009_ch_T0000193;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	6528089	6709071	100	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000194;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_G0000055;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=HG03009_ch_T0000194;Name=TBL1Y
HG03009_chrY	CAT	exon	6528089	6528374	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000194;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000194:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6528375	6638836	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000194;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000194:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6638837	6638925	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000194;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000194:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6638926	6642422	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000194;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000194:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6642423	6642530	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000194;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000194:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6642473	6642530	.	+	0	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000194;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000194:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	6642473	6642475	.	+	0	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000194;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=start_codon:HG03009_ch_T0000194;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6642531	6660366	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000194;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000194:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6660367	6660512	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000194;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000194:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6660367	6660512	.	+	2	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000194;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000194:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6660513	6681287	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000194;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000194:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6681288	6681540	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000194;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000194:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6681288	6681540	.	+	0	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000194;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000194:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6681541	6687586	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000194;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000194:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6687587	6687719	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000194;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000194:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6687587	6687719	.	+	2	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000194;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000194:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6687720	6688110	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000194;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000194:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6688111	6688252	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000194;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000194:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6688111	6688252	.	+	1	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000194;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000194:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6688253	6688950	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000194;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000194:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6688951	6689014	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000194;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000194:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6688951	6689014	.	+	0	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000194;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000194:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6689015	6689123	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000194;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000194:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6689124	6689221	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000194;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000194:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6689124	6689221	.	+	2	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000194;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000194:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6689222	6691950	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000194;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000194:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6691951	6692011	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000194;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000194:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6691951	6692011	.	+	0	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000194;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000194:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6692012	6698121	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000194;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000194:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6698122	6698243	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000194;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000194:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6698122	6698243	.	+	2	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000194;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000194:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6698244	6703285	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000194;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000194:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6703286	6703360	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000194;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000194:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6703286	6703360	.	+	0	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000194;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000194:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6703361	6703677	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000194;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000194:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6703678	6703805	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000194;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000194:12;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6703678	6703805	.	+	0	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000194;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000194:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6703806	6704654	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000194;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000194:12;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6704655	6704820	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000194;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000194:13;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6704655	6704820	.	+	1	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000194;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000194:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6704821	6707476	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000194;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000194:13;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6707477	6707578	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000194;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000194:14;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6707477	6707578	.	+	0	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000194;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000194:12;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6707579	6708859	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000194;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000194:14;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6708860	6709071	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000194;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000194:15;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6708860	6708880	.	+	0	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000194;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000194:13;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	6708878	6708880	.	+	0	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000194;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=stop_codon:HG03009_ch_T0000194;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	6528089	6723076	100	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000195;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_G0000055;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=HG03009_ch_T0000195;Name=TBL1Y
HG03009_chrY	CAT	exon	6528089	6528374	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000195;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000195:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6528375	6638836	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000195;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000195:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6638837	6638925	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000195;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000195:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6638926	6642422	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000195;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000195:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6642423	6642530	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000195;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000195:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6642473	6642530	.	+	0	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000195;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000195:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	6642473	6642475	.	+	0	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000195;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=start_codon:HG03009_ch_T0000195;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6642531	6660366	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000195;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000195:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6660367	6660512	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000195;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000195:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6660367	6660512	.	+	2	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000195;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000195:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6660513	6681287	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000195;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000195:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6681288	6681540	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000195;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000195:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6681288	6681540	.	+	0	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000195;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000195:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6681541	6687586	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000195;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000195:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6687587	6687719	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000195;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000195:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6687587	6687719	.	+	2	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000195;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000195:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6687720	6688110	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000195;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000195:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6688111	6688252	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000195;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000195:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6688111	6688252	.	+	1	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000195;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000195:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6688253	6688950	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000195;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000195:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6688951	6689014	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000195;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000195:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6688951	6689014	.	+	0	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000195;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000195:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6689015	6689123	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000195;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000195:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6689124	6689221	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000195;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000195:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6689124	6689221	.	+	2	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000195;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000195:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6689222	6691950	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000195;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000195:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6691951	6692011	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000195;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000195:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6691951	6692011	.	+	0	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000195;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000195:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6692012	6698121	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000195;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000195:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6698122	6698243	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000195;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000195:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6698122	6698243	.	+	2	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000195;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000195:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6698244	6703285	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000195;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000195:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6703286	6703360	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000195;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000195:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6703286	6703360	.	+	0	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000195;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000195:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6703361	6703677	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000195;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000195:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6703678	6703805	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000195;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000195:12;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6703678	6703805	.	+	0	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000195;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000195:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6703806	6704654	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000195;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000195:12;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6704655	6704820	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000195;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000195:13;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6704655	6704820	.	+	1	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000195;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000195:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6704821	6707476	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000195;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000195:13;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6707477	6707578	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000195;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000195:14;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6707477	6707578	.	+	0	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000195;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000195:12;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6707579	6718172	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000195;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000195:14;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6718173	6723076	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000195;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000195:15;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6718173	6718358	.	+	0	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000195;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000195:13;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	6718356	6718358	.	+	0	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000195;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=stop_codon:HG03009_ch_T0000195;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	6528089	6723076	100	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000196;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_G0000055;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=HG03009_ch_T0000196;Name=TBL1Y
HG03009_chrY	CAT	exon	6528089	6528374	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000196;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000196:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6528375	6529479	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000196;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000196:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6529480	6529564	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000196;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000196:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6529565	6595601	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000196;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000196:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6595602	6595632	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000196;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000196:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6595633	6638836	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000196;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000196:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6638837	6638925	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000196;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000196:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6638926	6642422	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000196;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000196:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6642423	6642530	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000196;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000196:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6642473	6642530	.	+	0	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000196;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000196:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	6642473	6642475	.	+	0	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000196;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=start_codon:HG03009_ch_T0000196;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6642531	6660366	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000196;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000196:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6660367	6660512	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000196;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000196:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6660367	6660512	.	+	2	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000196;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000196:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6660513	6681287	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000196;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000196:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6681288	6681540	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000196;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000196:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6681288	6681540	.	+	0	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000196;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000196:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6681541	6687586	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000196;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000196:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6687587	6687719	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000196;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000196:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6687587	6687719	.	+	2	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000196;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000196:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6687720	6688110	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000196;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000196:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6688111	6688252	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000196;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000196:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6688111	6688252	.	+	1	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000196;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000196:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6688253	6688950	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000196;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000196:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6688951	6689014	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000196;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000196:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6688951	6689014	.	+	0	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000196;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000196:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6689015	6689123	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000196;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000196:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6689124	6689221	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000196;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000196:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6689124	6689221	.	+	2	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000196;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000196:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6689222	6691950	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000196;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000196:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6691951	6692011	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000196;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000196:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6691951	6692011	.	+	0	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000196;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000196:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6692012	6698121	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000196;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000196:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6698122	6698243	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000196;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000196:12;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6698122	6698243	.	+	2	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000196;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000196:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6698244	6703285	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000196;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000196:12;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6703286	6703360	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000196;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000196:13;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6703286	6703360	.	+	0	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000196;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000196:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6703361	6703677	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000196;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000196:13;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6703678	6703805	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000196;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000196:14;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6703678	6703805	.	+	0	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000196;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000196:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6703806	6704654	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000196;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000196:14;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6704655	6704820	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000196;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000196:15;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6704655	6704820	.	+	1	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000196;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000196:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6704821	6707476	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000196;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000196:15;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6707477	6707578	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000196;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000196:16;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6707477	6707578	.	+	0	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000196;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000196:12;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6707579	6718172	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000196;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000196:16;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6718173	6718238	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000196;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000196:17;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6718173	6718238	.	+	0	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000196;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000196:13;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6718239	6722785	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000196;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000196:17;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6722786	6723076	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000196;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000196:18;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6722786	6722794	.	+	0	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000196;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000196:14;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	6722792	6722794	.	+	0	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000196;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=stop_codon:HG03009_ch_T0000196;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	6528089	6723076	100	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000197;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_G0000055;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=HG03009_ch_T0000197;Name=TBL1Y
HG03009_chrY	CAT	exon	6528089	6528374	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000197;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000197:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6528375	6529479	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000197;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000197:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6529480	6529564	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000197;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000197:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6529565	6595601	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000197;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000197:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6595602	6595632	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000197;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000197:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6595633	6638836	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000197;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000197:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6638837	6638925	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000197;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000197:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6638926	6642422	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000197;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000197:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6642423	6642530	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000197;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000197:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6642473	6642530	.	+	0	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000197;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000197:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	6642473	6642475	.	+	0	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000197;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=start_codon:HG03009_ch_T0000197;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6642531	6660366	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000197;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000197:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6660367	6660512	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000197;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000197:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6660367	6660512	.	+	2	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000197;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000197:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6660513	6681287	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000197;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000197:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6681288	6681540	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000197;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000197:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6681288	6681540	.	+	0	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000197;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000197:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6681541	6687586	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000197;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000197:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6687587	6687719	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000197;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000197:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6687587	6687719	.	+	2	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000197;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000197:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6687720	6688110	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000197;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000197:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6688111	6688252	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000197;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000197:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6688111	6688252	.	+	1	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000197;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000197:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6688253	6688950	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000197;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000197:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6688951	6689014	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000197;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000197:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6688951	6689014	.	+	0	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000197;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000197:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6689015	6689123	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000197;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000197:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6689124	6689221	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000197;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000197:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6689124	6689221	.	+	2	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000197;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000197:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6689222	6691950	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000197;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000197:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6691951	6692011	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000197;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000197:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6691951	6692011	.	+	0	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000197;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000197:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6692012	6698121	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000197;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000197:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6698122	6698243	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000197;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000197:12;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6698122	6698243	.	+	2	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000197;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000197:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6698244	6703285	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000197;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000197:12;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6703286	6703360	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000197;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000197:13;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6703286	6703360	.	+	0	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000197;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000197:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6703361	6703677	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000197;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000197:13;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6703678	6703805	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000197;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000197:14;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6703678	6703805	.	+	0	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000197;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000197:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6703806	6704674	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000197;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000197:14;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6704675	6723076	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000197;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000197:15;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6704675	6704780	.	+	1	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000197;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000197:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	6704778	6704780	.	+	0	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000197;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=stop_codon:HG03009_ch_T0000197;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	6528089	6723076	100	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000198;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_G0000055;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=HG03009_ch_T0000198;Name=TBL1Y
HG03009_chrY	CAT	exon	6528089	6528374	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000198;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000198:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6528375	6638836	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000198;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000198:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6638837	6638925	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000198;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000198:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6638926	6642422	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000198;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000198:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6642423	6642530	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000198;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000198:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6642473	6642530	.	+	0	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000198;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000198:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	6642473	6642475	.	+	0	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000198;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=start_codon:HG03009_ch_T0000198;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6642531	6660366	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000198;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000198:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6660367	6660512	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000198;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000198:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6660367	6660512	.	+	2	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000198;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000198:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6660513	6681287	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000198;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000198:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6681288	6681540	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000198;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000198:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6681288	6681540	.	+	0	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000198;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000198:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6681541	6687586	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000198;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000198:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6687587	6687719	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000198;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000198:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6687587	6687719	.	+	2	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000198;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000198:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6687720	6688110	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000198;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000198:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6688111	6688252	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000198;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000198:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6688111	6688252	.	+	1	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000198;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000198:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6688253	6688950	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000198;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000198:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6688951	6689014	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000198;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000198:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6688951	6689014	.	+	0	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000198;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000198:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6689015	6689123	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000198;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000198:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6689124	6689221	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000198;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000198:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6689124	6689221	.	+	2	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000198;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000198:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6689222	6691950	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000198;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000198:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6691951	6692011	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000198;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000198:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6691951	6692011	.	+	0	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000198;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000198:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6692012	6698121	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000198;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000198:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6698122	6698243	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000198;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000198:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6698122	6698243	.	+	2	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000198;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000198:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6698244	6703285	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000198;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000198:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6703286	6703360	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000198;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000198:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6703286	6703360	.	+	0	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000198;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000198:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6703361	6703677	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000198;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000198:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6703678	6703805	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000198;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000198:12;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6703678	6703805	.	+	0	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000198;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000198:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6703806	6704674	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000198;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000198:12;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6704675	6723076	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000198;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000198:13;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6704675	6704780	.	+	1	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000198;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000198:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	6704778	6704780	.	+	0	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000198;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=stop_codon:HG03009_ch_T0000198;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	6659998	6709071	100	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000199;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_G0000055;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=HG03009_ch_T0000199;Name=TBL1Y
HG03009_chrY	CAT	exon	6659998	6660512	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000199;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000199:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6660267	6660512	.	+	0	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000199;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000199:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	6660267	6660269	.	+	0	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000199;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=start_codon:HG03009_ch_T0000199;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6660513	6681287	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000199;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000199:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6681288	6681540	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000199;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000199:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6681288	6681540	.	+	0	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000199;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000199:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6681541	6687586	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000199;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000199:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6687587	6687719	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000199;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000199:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6687587	6687719	.	+	2	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000199;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000199:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6687720	6688110	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000199;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000199:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6688111	6688252	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000199;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000199:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6688111	6688252	.	+	1	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000199;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000199:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6688253	6688950	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000199;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000199:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6688951	6689014	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000199;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000199:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6688951	6689014	.	+	0	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000199;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000199:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6689015	6689123	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000199;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000199:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6689124	6689221	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000199;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000199:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6689124	6689221	.	+	2	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000199;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000199:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6689222	6691950	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000199;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000199:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6691951	6692011	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000199;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000199:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6691951	6692011	.	+	0	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000199;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000199:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6692012	6698121	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000199;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000199:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6698122	6698243	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000199;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000199:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6698122	6698243	.	+	2	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000199;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000199:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6698244	6703285	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000199;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000199:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6703286	6703360	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000199;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000199:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6703286	6703360	.	+	0	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000199;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000199:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6703361	6703677	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000199;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000199:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6703678	6703805	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000199;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000199:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6703678	6703805	.	+	0	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000199;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000199:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6703806	6704654	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000199;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000199:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6704655	6704820	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000199;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000199:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6704655	6704820	.	+	1	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000199;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000199:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6704821	6707476	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000199;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000199:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6707477	6707578	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000199;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000199:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6707477	6707578	.	+	0	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000199;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000199:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6707579	6708859	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000199;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03009_ch_T0000199:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6708860	6709071	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000199;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03009_ch_T0000199:12;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	6708860	6708880	.	+	0	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000199;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03009_ch_T0000199:12;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	6708878	6708880	.	+	0	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000199;gene_id=HG03009_ch_G0000055;Parent=HG03009_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=stop_codon:HG03009_ch_T0000199;Name=TBL1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	6891347	6998916	.	+	.	source_gene_common_name=PRKY;source_gene=hg002_chrY_paternal_93;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;gene_id=HG03009_ch_G0000056;gene_biotype=transcribed_pseudogene;gene_name=PRKY;gene_sources=liftoff;ID=HG03009_ch_G0000056;Name=PRKY
HG03009_chrY	CAT	transcript	6891347	6998916	1000	+	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=HG03009_ch_T0000200;gene_id=HG03009_ch_G0000056;Parent=HG03009_ch_G0000056;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=HG03009_ch_T0000200;Name=PRKY
HG03009_chrY	CAT	exon	6891347	6891853	.	+	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=HG03009_ch_T0000200;gene_id=HG03009_ch_G0000056;Parent=HG03009_ch_T0000200;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=exon:HG03009_ch_T0000200:0;Name=PRKY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6891854	6921308	.	+	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=HG03009_ch_T0000200;gene_id=HG03009_ch_G0000056;Parent=HG03009_ch_T0000200;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=intron:HG03009_ch_T0000200:0;Name=PRKY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6921309	6921477	.	+	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=HG03009_ch_T0000200;gene_id=HG03009_ch_G0000056;Parent=HG03009_ch_T0000200;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=exon:HG03009_ch_T0000200:1;Name=PRKY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6921478	6943277	.	+	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=HG03009_ch_T0000200;gene_id=HG03009_ch_G0000056;Parent=HG03009_ch_T0000200;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=intron:HG03009_ch_T0000200:1;Name=PRKY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6943278	6943541	.	+	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=HG03009_ch_T0000200;gene_id=HG03009_ch_G0000056;Parent=HG03009_ch_T0000200;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=exon:HG03009_ch_T0000200:2;Name=PRKY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6943542	6958485	.	+	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=HG03009_ch_T0000200;gene_id=HG03009_ch_G0000056;Parent=HG03009_ch_T0000200;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=intron:HG03009_ch_T0000200:2;Name=PRKY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6958486	6958605	.	+	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=HG03009_ch_T0000200;gene_id=HG03009_ch_G0000056;Parent=HG03009_ch_T0000200;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=exon:HG03009_ch_T0000200:3;Name=PRKY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6958606	6973504	.	+	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=HG03009_ch_T0000200;gene_id=HG03009_ch_G0000056;Parent=HG03009_ch_T0000200;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=intron:HG03009_ch_T0000200:3;Name=PRKY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6973505	6973600	.	+	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=HG03009_ch_T0000200;gene_id=HG03009_ch_G0000056;Parent=HG03009_ch_T0000200;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=exon:HG03009_ch_T0000200:4;Name=PRKY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6973601	6984725	.	+	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=HG03009_ch_T0000200;gene_id=HG03009_ch_G0000056;Parent=HG03009_ch_T0000200;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=intron:HG03009_ch_T0000200:4;Name=PRKY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6984726	6984803	.	+	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=HG03009_ch_T0000200;gene_id=HG03009_ch_G0000056;Parent=HG03009_ch_T0000200;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=exon:HG03009_ch_T0000200:5;Name=PRKY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6984804	6989111	.	+	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=HG03009_ch_T0000200;gene_id=HG03009_ch_G0000056;Parent=HG03009_ch_T0000200;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=intron:HG03009_ch_T0000200:5;Name=PRKY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6989112	6989258	.	+	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=HG03009_ch_T0000200;gene_id=HG03009_ch_G0000056;Parent=HG03009_ch_T0000200;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=exon:HG03009_ch_T0000200:6;Name=PRKY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	6989259	6993080	.	+	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=HG03009_ch_T0000200;gene_id=HG03009_ch_G0000056;Parent=HG03009_ch_T0000200;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=intron:HG03009_ch_T0000200:6;Name=PRKY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	6993081	6998916	.	+	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=HG03009_ch_T0000200;gene_id=HG03009_ch_G0000056;Parent=HG03009_ch_T0000200;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=exon:HG03009_ch_T0000200:7;Name=PRKY;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	7075978	7137985	.	+	.	source_gene_common_name=LOC107987338;source_gene=hg002_chrY_paternal_97;alternative_source_transcripts=hg002_chrY_paternal_97.1,hg002_chrY_paternal_97.1;gene_id=HG03009_ch_G0000057;gene_biotype=lncRNA;gene_name=LOC107987338;gene_sources=liftoff;ID=HG03009_ch_G0000057;Name=LOC107987338
HG03009_chrY	CAT	transcript	7075978	7137985	1000	+	.	source_transcript=hg002_chrY_paternal_97.1;source_transcript_name=hg002_chrY_paternal_97.1;source_gene=hg002_chrY_paternal_97;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_97;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_97.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_97.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987338;alternative_source_transcripts=hg002_chrY_paternal_97.1,hg002_chrY_paternal_97.1;transcript_id=HG03009_ch_T0000201;gene_id=HG03009_ch_G0000057;Parent=HG03009_ch_G0000057;transcript_name=hg002_chrY_paternal_97.1;gene_name=LOC107987338;ID=HG03009_ch_T0000201;Name=LOC107987338
HG03009_chrY	CAT	exon	7075978	7076091	.	+	.	source_transcript=hg002_chrY_paternal_97.1;source_transcript_name=hg002_chrY_paternal_97.1;source_gene=hg002_chrY_paternal_97;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_97;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_97.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_97.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987338;alternative_source_transcripts=hg002_chrY_paternal_97.1,hg002_chrY_paternal_97.1;transcript_id=HG03009_ch_T0000201;gene_id=HG03009_ch_G0000057;Parent=HG03009_ch_T0000201;transcript_name=hg002_chrY_paternal_97.1;gene_name=LOC107987338;ID=exon:HG03009_ch_T0000201:0;Name=LOC107987338;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	7076092	7118386	.	+	.	source_transcript=hg002_chrY_paternal_97.1;source_transcript_name=hg002_chrY_paternal_97.1;source_gene=hg002_chrY_paternal_97;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_97;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_97.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_97.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987338;alternative_source_transcripts=hg002_chrY_paternal_97.1,hg002_chrY_paternal_97.1;transcript_id=HG03009_ch_T0000201;gene_id=HG03009_ch_G0000057;Parent=HG03009_ch_T0000201;transcript_name=hg002_chrY_paternal_97.1;gene_name=LOC107987338;ID=intron:HG03009_ch_T0000201:0;Name=LOC107987338;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	7118387	7118545	.	+	.	source_transcript=hg002_chrY_paternal_97.1;source_transcript_name=hg002_chrY_paternal_97.1;source_gene=hg002_chrY_paternal_97;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_97;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_97.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_97.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987338;alternative_source_transcripts=hg002_chrY_paternal_97.1,hg002_chrY_paternal_97.1;transcript_id=HG03009_ch_T0000201;gene_id=HG03009_ch_G0000057;Parent=HG03009_ch_T0000201;transcript_name=hg002_chrY_paternal_97.1;gene_name=LOC107987338;ID=exon:HG03009_ch_T0000201:1;Name=LOC107987338;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	7118546	7136328	.	+	.	source_transcript=hg002_chrY_paternal_97.1;source_transcript_name=hg002_chrY_paternal_97.1;source_gene=hg002_chrY_paternal_97;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_97;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_97.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_97.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987338;alternative_source_transcripts=hg002_chrY_paternal_97.1,hg002_chrY_paternal_97.1;transcript_id=HG03009_ch_T0000201;gene_id=HG03009_ch_G0000057;Parent=HG03009_ch_T0000201;transcript_name=hg002_chrY_paternal_97.1;gene_name=LOC107987338;ID=intron:HG03009_ch_T0000201:1;Name=LOC107987338;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	7136329	7136437	.	+	.	source_transcript=hg002_chrY_paternal_97.1;source_transcript_name=hg002_chrY_paternal_97.1;source_gene=hg002_chrY_paternal_97;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_97;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_97.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_97.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987338;alternative_source_transcripts=hg002_chrY_paternal_97.1,hg002_chrY_paternal_97.1;transcript_id=HG03009_ch_T0000201;gene_id=HG03009_ch_G0000057;Parent=HG03009_ch_T0000201;transcript_name=hg002_chrY_paternal_97.1;gene_name=LOC107987338;ID=exon:HG03009_ch_T0000201:2;Name=LOC107987338;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	7136438	7137469	.	+	.	source_transcript=hg002_chrY_paternal_97.1;source_transcript_name=hg002_chrY_paternal_97.1;source_gene=hg002_chrY_paternal_97;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_97;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_97.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_97.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987338;alternative_source_transcripts=hg002_chrY_paternal_97.1,hg002_chrY_paternal_97.1;transcript_id=HG03009_ch_T0000201;gene_id=HG03009_ch_G0000057;Parent=HG03009_ch_T0000201;transcript_name=hg002_chrY_paternal_97.1;gene_name=LOC107987338;ID=intron:HG03009_ch_T0000201:2;Name=LOC107987338;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	7137470	7137985	.	+	.	source_transcript=hg002_chrY_paternal_97.1;source_transcript_name=hg002_chrY_paternal_97.1;source_gene=hg002_chrY_paternal_97;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_97;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_97.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_97.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987338;alternative_source_transcripts=hg002_chrY_paternal_97.1,hg002_chrY_paternal_97.1;transcript_id=HG03009_ch_T0000201;gene_id=HG03009_ch_G0000057;Parent=HG03009_ch_T0000201;transcript_name=hg002_chrY_paternal_97.1;gene_name=LOC107987338;ID=exon:HG03009_ch_T0000201:3;Name=LOC107987338;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	7317235	7319126	.	-	.	source_gene_common_name=TTTY16;source_gene=hg002_chrY_paternal_101;alternative_source_transcripts=hg002_chrY_paternal_101.1,hg002_chrY_paternal_101.1;gene_id=HG03009_ch_G0000058;gene_biotype=lncRNA;gene_name=TTTY16;gene_sources=liftoff;ID=HG03009_ch_G0000058;Name=TTTY16
HG03009_chrY	CAT	transcript	7317235	7319126	1000	-	.	source_transcript=hg002_chrY_paternal_101.1;source_transcript_name=hg002_chrY_paternal_101.1;source_gene=hg002_chrY_paternal_101;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_101;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_101.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_101.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;alternative_source_transcripts=hg002_chrY_paternal_101.1,hg002_chrY_paternal_101.1;transcript_id=HG03009_ch_T0000202;gene_id=HG03009_ch_G0000058;Parent=HG03009_ch_G0000058;transcript_name=hg002_chrY_paternal_101.1;gene_name=TTTY16;ID=HG03009_ch_T0000202;Name=TTTY16
HG03009_chrY	CAT	exon	7317235	7317365	.	-	.	source_transcript=hg002_chrY_paternal_101.1;source_transcript_name=hg002_chrY_paternal_101.1;source_gene=hg002_chrY_paternal_101;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_101;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_101.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_101.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;alternative_source_transcripts=hg002_chrY_paternal_101.1,hg002_chrY_paternal_101.1;transcript_id=HG03009_ch_T0000202;gene_id=HG03009_ch_G0000058;Parent=HG03009_ch_T0000202;transcript_name=hg002_chrY_paternal_101.1;gene_name=TTTY16;ID=exon:HG03009_ch_T0000202:0;Name=TTTY16;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	7317366	7319065	.	-	.	source_transcript=hg002_chrY_paternal_101.1;source_transcript_name=hg002_chrY_paternal_101.1;source_gene=hg002_chrY_paternal_101;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_101;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_101.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_101.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;alternative_source_transcripts=hg002_chrY_paternal_101.1,hg002_chrY_paternal_101.1;transcript_id=HG03009_ch_T0000202;gene_id=HG03009_ch_G0000058;Parent=HG03009_ch_T0000202;transcript_name=hg002_chrY_paternal_101.1;gene_name=TTTY16;ID=intron:HG03009_ch_T0000202:0;Name=TTTY16;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	7319066	7319126	.	-	.	source_transcript=hg002_chrY_paternal_101.1;source_transcript_name=hg002_chrY_paternal_101.1;source_gene=hg002_chrY_paternal_101;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_101;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_101.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_101.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;alternative_source_transcripts=hg002_chrY_paternal_101.1,hg002_chrY_paternal_101.1;transcript_id=HG03009_ch_T0000202;gene_id=HG03009_ch_G0000058;Parent=HG03009_ch_T0000202;transcript_name=hg002_chrY_paternal_101.1;gene_name=TTTY16;ID=exon:HG03009_ch_T0000202:1;Name=TTTY16;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	7400665	7431068	.	-	.	source_gene_common_name=LOC107987339;source_gene=hg002_chrY_paternal_103;alternative_source_transcripts=hg002_chrY_paternal_103.1,hg002_chrY_paternal_103.1;gene_id=HG03009_ch_G0000059;gene_biotype=lncRNA;gene_name=LOC107987339;gene_sources=liftoff;ID=HG03009_ch_G0000059;Name=LOC107987339
HG03009_chrY	CAT	transcript	7400665	7431068	1000	-	.	source_transcript=hg002_chrY_paternal_103.1;source_transcript_name=hg002_chrY_paternal_103.1;source_gene=hg002_chrY_paternal_103;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_103;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_103.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_103.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987339;alternative_source_transcripts=hg002_chrY_paternal_103.1,hg002_chrY_paternal_103.1;transcript_id=HG03009_ch_T0000203;gene_id=HG03009_ch_G0000059;Parent=HG03009_ch_G0000059;transcript_name=hg002_chrY_paternal_103.1;gene_name=LOC107987339;ID=HG03009_ch_T0000203;Name=LOC107987339
HG03009_chrY	CAT	exon	7400665	7400712	.	-	.	source_transcript=hg002_chrY_paternal_103.1;source_transcript_name=hg002_chrY_paternal_103.1;source_gene=hg002_chrY_paternal_103;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_103;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_103.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_103.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987339;alternative_source_transcripts=hg002_chrY_paternal_103.1,hg002_chrY_paternal_103.1;transcript_id=HG03009_ch_T0000203;gene_id=HG03009_ch_G0000059;Parent=HG03009_ch_T0000203;transcript_name=hg002_chrY_paternal_103.1;gene_name=LOC107987339;ID=exon:HG03009_ch_T0000203:0;Name=LOC107987339;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	7400713	7426692	.	-	.	source_transcript=hg002_chrY_paternal_103.1;source_transcript_name=hg002_chrY_paternal_103.1;source_gene=hg002_chrY_paternal_103;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_103;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_103.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_103.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987339;alternative_source_transcripts=hg002_chrY_paternal_103.1,hg002_chrY_paternal_103.1;transcript_id=HG03009_ch_T0000203;gene_id=HG03009_ch_G0000059;Parent=HG03009_ch_T0000203;transcript_name=hg002_chrY_paternal_103.1;gene_name=LOC107987339;ID=intron:HG03009_ch_T0000203:0;Name=LOC107987339;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	7426693	7426802	.	-	.	source_transcript=hg002_chrY_paternal_103.1;source_transcript_name=hg002_chrY_paternal_103.1;source_gene=hg002_chrY_paternal_103;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_103;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_103.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_103.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987339;alternative_source_transcripts=hg002_chrY_paternal_103.1,hg002_chrY_paternal_103.1;transcript_id=HG03009_ch_T0000203;gene_id=HG03009_ch_G0000059;Parent=HG03009_ch_T0000203;transcript_name=hg002_chrY_paternal_103.1;gene_name=LOC107987339;ID=exon:HG03009_ch_T0000203:1;Name=LOC107987339;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	7426803	7430351	.	-	.	source_transcript=hg002_chrY_paternal_103.1;source_transcript_name=hg002_chrY_paternal_103.1;source_gene=hg002_chrY_paternal_103;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_103;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_103.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_103.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987339;alternative_source_transcripts=hg002_chrY_paternal_103.1,hg002_chrY_paternal_103.1;transcript_id=HG03009_ch_T0000203;gene_id=HG03009_ch_G0000059;Parent=HG03009_ch_T0000203;transcript_name=hg002_chrY_paternal_103.1;gene_name=LOC107987339;ID=intron:HG03009_ch_T0000203:1;Name=LOC107987339;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	7430352	7431068	.	-	.	source_transcript=hg002_chrY_paternal_103.1;source_transcript_name=hg002_chrY_paternal_103.1;source_gene=hg002_chrY_paternal_103;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_103;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_103.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_103.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987339;alternative_source_transcripts=hg002_chrY_paternal_103.1,hg002_chrY_paternal_103.1;transcript_id=HG03009_ch_T0000203;gene_id=HG03009_ch_G0000059;Parent=HG03009_ch_T0000203;transcript_name=hg002_chrY_paternal_103.1;gene_name=LOC107987339;ID=exon:HG03009_ch_T0000203:2;Name=LOC107987339;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	7425213	7431881	.	+	.	source_gene_common_name=TTTY12;source_gene=hg002_chrY_paternal_104;alternative_source_transcripts=hg002_chrY_paternal_104.1,hg002_chrY_paternal_104.1;gene_id=HG03009_ch_G0000060;gene_biotype=lncRNA;gene_name=TTTY12;gene_sources=liftoff;ID=HG03009_ch_G0000060;Name=TTTY12
HG03009_chrY	CAT	transcript	7425213	7431881	1000	+	.	source_transcript=hg002_chrY_paternal_104.1;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.1,hg002_chrY_paternal_104.1;transcript_id=HG03009_ch_T0000204;gene_id=HG03009_ch_G0000060;Parent=HG03009_ch_G0000060;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=HG03009_ch_T0000204;Name=TTTY12
HG03009_chrY	CAT	exon	7425213	7425260	.	+	.	source_transcript=hg002_chrY_paternal_104.1;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.1,hg002_chrY_paternal_104.1;transcript_id=HG03009_ch_T0000204;gene_id=HG03009_ch_G0000060;Parent=HG03009_ch_T0000204;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=exon:HG03009_ch_T0000204:0;Name=TTTY12;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	7425261	7426121	.	+	.	source_transcript=hg002_chrY_paternal_104.1;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.1,hg002_chrY_paternal_104.1;transcript_id=HG03009_ch_T0000204;gene_id=HG03009_ch_G0000060;Parent=HG03009_ch_T0000204;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=intron:HG03009_ch_T0000204:0;Name=TTTY12;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	7426122	7426277	.	+	.	source_transcript=hg002_chrY_paternal_104.1;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.1,hg002_chrY_paternal_104.1;transcript_id=HG03009_ch_T0000204;gene_id=HG03009_ch_G0000060;Parent=HG03009_ch_T0000204;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=exon:HG03009_ch_T0000204:1;Name=TTTY12;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	7426278	7431058	.	+	.	source_transcript=hg002_chrY_paternal_104.1;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.1,hg002_chrY_paternal_104.1;transcript_id=HG03009_ch_T0000204;gene_id=HG03009_ch_G0000060;Parent=HG03009_ch_T0000204;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=intron:HG03009_ch_T0000204:1;Name=TTTY12;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	7431059	7431881	.	+	.	source_transcript=hg002_chrY_paternal_104.1;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.1,hg002_chrY_paternal_104.1;transcript_id=HG03009_ch_T0000204;gene_id=HG03009_ch_G0000060;Parent=HG03009_ch_T0000204;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=exon:HG03009_ch_T0000204:2;Name=TTTY12;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	7425213	7431881	1000	+	.	source_transcript=hg002_chrY_paternal_104.2;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.2,hg002_chrY_paternal_104.2;transcript_id=HG03009_ch_T0000205;gene_id=HG03009_ch_G0000060;Parent=HG03009_ch_G0000060;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=HG03009_ch_T0000205;Name=TTTY12
HG03009_chrY	CAT	exon	7425213	7425260	.	+	.	source_transcript=hg002_chrY_paternal_104.2;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.2,hg002_chrY_paternal_104.2;transcript_id=HG03009_ch_T0000205;gene_id=HG03009_ch_G0000060;Parent=HG03009_ch_T0000205;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=exon:HG03009_ch_T0000205:0;Name=TTTY12;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	7425261	7426121	.	+	.	source_transcript=hg002_chrY_paternal_104.2;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.2,hg002_chrY_paternal_104.2;transcript_id=HG03009_ch_T0000205;gene_id=HG03009_ch_G0000060;Parent=HG03009_ch_T0000205;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=intron:HG03009_ch_T0000205:0;Name=TTTY12;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	7426122	7426277	.	+	.	source_transcript=hg002_chrY_paternal_104.2;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.2,hg002_chrY_paternal_104.2;transcript_id=HG03009_ch_T0000205;gene_id=HG03009_ch_G0000060;Parent=HG03009_ch_T0000205;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=exon:HG03009_ch_T0000205:1;Name=TTTY12;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	7426278	7426741	.	+	.	source_transcript=hg002_chrY_paternal_104.2;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.2,hg002_chrY_paternal_104.2;transcript_id=HG03009_ch_T0000205;gene_id=HG03009_ch_G0000060;Parent=HG03009_ch_T0000205;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=intron:HG03009_ch_T0000205:1;Name=TTTY12;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	7426742	7426823	.	+	.	source_transcript=hg002_chrY_paternal_104.2;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.2,hg002_chrY_paternal_104.2;transcript_id=HG03009_ch_T0000205;gene_id=HG03009_ch_G0000060;Parent=HG03009_ch_T0000205;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=exon:HG03009_ch_T0000205:2;Name=TTTY12;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	7426824	7431058	.	+	.	source_transcript=hg002_chrY_paternal_104.2;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.2,hg002_chrY_paternal_104.2;transcript_id=HG03009_ch_T0000205;gene_id=HG03009_ch_G0000060;Parent=HG03009_ch_T0000205;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=intron:HG03009_ch_T0000205:2;Name=TTTY12;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	7431059	7431881	.	+	.	source_transcript=hg002_chrY_paternal_104.2;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.2,hg002_chrY_paternal_104.2;transcript_id=HG03009_ch_T0000205;gene_id=HG03009_ch_G0000060;Parent=HG03009_ch_T0000205;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=exon:HG03009_ch_T0000205:3;Name=TTTY12;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	7452013	7479965	.	-	.	source_gene_common_name=LOC105377229;source_gene=hg002_chrY_paternal_105;alternative_source_transcripts=hg002_chrY_paternal_105.1,hg002_chrY_paternal_105.1;gene_id=HG03009_ch_G0000061;gene_biotype=lncRNA;gene_name=LOC105377229;gene_sources=liftoff;ID=HG03009_ch_G0000061;Name=LOC105377229
HG03009_chrY	CAT	transcript	7452013	7479965	1000	-	.	source_transcript=hg002_chrY_paternal_105.1;source_transcript_name=hg002_chrY_paternal_105.1;source_gene=hg002_chrY_paternal_105;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_105;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_105.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_105.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377229;alternative_source_transcripts=hg002_chrY_paternal_105.1,hg002_chrY_paternal_105.1;transcript_id=HG03009_ch_T0000206;gene_id=HG03009_ch_G0000061;Parent=HG03009_ch_G0000061;transcript_name=hg002_chrY_paternal_105.1;gene_name=LOC105377229;ID=HG03009_ch_T0000206;Name=LOC105377229
HG03009_chrY	CAT	exon	7452013	7453288	.	-	.	source_transcript=hg002_chrY_paternal_105.1;source_transcript_name=hg002_chrY_paternal_105.1;source_gene=hg002_chrY_paternal_105;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_105;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_105.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_105.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377229;alternative_source_transcripts=hg002_chrY_paternal_105.1,hg002_chrY_paternal_105.1;transcript_id=HG03009_ch_T0000206;gene_id=HG03009_ch_G0000061;Parent=HG03009_ch_T0000206;transcript_name=hg002_chrY_paternal_105.1;gene_name=LOC105377229;ID=exon:HG03009_ch_T0000206:0;Name=LOC105377229;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	7453289	7453435	.	-	.	source_transcript=hg002_chrY_paternal_105.1;source_transcript_name=hg002_chrY_paternal_105.1;source_gene=hg002_chrY_paternal_105;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_105;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_105.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_105.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377229;alternative_source_transcripts=hg002_chrY_paternal_105.1,hg002_chrY_paternal_105.1;transcript_id=HG03009_ch_T0000206;gene_id=HG03009_ch_G0000061;Parent=HG03009_ch_T0000206;transcript_name=hg002_chrY_paternal_105.1;gene_name=LOC105377229;ID=intron:HG03009_ch_T0000206:0;Name=LOC105377229;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	7453436	7453607	.	-	.	source_transcript=hg002_chrY_paternal_105.1;source_transcript_name=hg002_chrY_paternal_105.1;source_gene=hg002_chrY_paternal_105;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_105;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_105.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_105.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377229;alternative_source_transcripts=hg002_chrY_paternal_105.1,hg002_chrY_paternal_105.1;transcript_id=HG03009_ch_T0000206;gene_id=HG03009_ch_G0000061;Parent=HG03009_ch_T0000206;transcript_name=hg002_chrY_paternal_105.1;gene_name=LOC105377229;ID=exon:HG03009_ch_T0000206:1;Name=LOC105377229;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	7453608	7454175	.	-	.	source_transcript=hg002_chrY_paternal_105.1;source_transcript_name=hg002_chrY_paternal_105.1;source_gene=hg002_chrY_paternal_105;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_105;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_105.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_105.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377229;alternative_source_transcripts=hg002_chrY_paternal_105.1,hg002_chrY_paternal_105.1;transcript_id=HG03009_ch_T0000206;gene_id=HG03009_ch_G0000061;Parent=HG03009_ch_T0000206;transcript_name=hg002_chrY_paternal_105.1;gene_name=LOC105377229;ID=intron:HG03009_ch_T0000206:1;Name=LOC105377229;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	7454176	7454300	.	-	.	source_transcript=hg002_chrY_paternal_105.1;source_transcript_name=hg002_chrY_paternal_105.1;source_gene=hg002_chrY_paternal_105;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_105;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_105.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_105.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377229;alternative_source_transcripts=hg002_chrY_paternal_105.1,hg002_chrY_paternal_105.1;transcript_id=HG03009_ch_T0000206;gene_id=HG03009_ch_G0000061;Parent=HG03009_ch_T0000206;transcript_name=hg002_chrY_paternal_105.1;gene_name=LOC105377229;ID=exon:HG03009_ch_T0000206:2;Name=LOC105377229;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	7454301	7479896	.	-	.	source_transcript=hg002_chrY_paternal_105.1;source_transcript_name=hg002_chrY_paternal_105.1;source_gene=hg002_chrY_paternal_105;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_105;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_105.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_105.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377229;alternative_source_transcripts=hg002_chrY_paternal_105.1,hg002_chrY_paternal_105.1;transcript_id=HG03009_ch_T0000206;gene_id=HG03009_ch_G0000061;Parent=HG03009_ch_T0000206;transcript_name=hg002_chrY_paternal_105.1;gene_name=LOC105377229;ID=intron:HG03009_ch_T0000206:2;Name=LOC105377229;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	7479897	7479965	.	-	.	source_transcript=hg002_chrY_paternal_105.1;source_transcript_name=hg002_chrY_paternal_105.1;source_gene=hg002_chrY_paternal_105;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_105;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_105.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_105.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377229;alternative_source_transcripts=hg002_chrY_paternal_105.1,hg002_chrY_paternal_105.1;transcript_id=HG03009_ch_T0000206;gene_id=HG03009_ch_G0000061;Parent=HG03009_ch_T0000206;transcript_name=hg002_chrY_paternal_105.1;gene_name=LOC105377229;ID=exon:HG03009_ch_T0000206:3;Name=LOC105377229;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	8016255	8028522	.	+	.	source_gene_common_name=LOC105377231;source_gene=hg002_chrY_paternal_124;alternative_source_transcripts=hg002_chrY_paternal_124.1,hg002_chrY_paternal_124.1;gene_id=HG03009_ch_G0000062;gene_biotype=lncRNA;gene_name=LOC105377231;gene_sources=liftoff;ID=HG03009_ch_G0000062;Name=LOC105377231
HG03009_chrY	CAT	transcript	8016255	8028522	1000	+	.	source_transcript=hg002_chrY_paternal_124.1;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.1,hg002_chrY_paternal_124.1;transcript_id=HG03009_ch_T0000207;gene_id=HG03009_ch_G0000062;Parent=HG03009_ch_G0000062;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=HG03009_ch_T0000207;Name=LOC105377231
HG03009_chrY	CAT	exon	8016255	8016340	.	+	.	source_transcript=hg002_chrY_paternal_124.1;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.1,hg002_chrY_paternal_124.1;transcript_id=HG03009_ch_T0000207;gene_id=HG03009_ch_G0000062;Parent=HG03009_ch_T0000207;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=exon:HG03009_ch_T0000207:0;Name=LOC105377231;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8016341	8023934	.	+	.	source_transcript=hg002_chrY_paternal_124.1;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.1,hg002_chrY_paternal_124.1;transcript_id=HG03009_ch_T0000207;gene_id=HG03009_ch_G0000062;Parent=HG03009_ch_T0000207;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=intron:HG03009_ch_T0000207:0;Name=LOC105377231;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8023935	8024188	.	+	.	source_transcript=hg002_chrY_paternal_124.1;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.1,hg002_chrY_paternal_124.1;transcript_id=HG03009_ch_T0000207;gene_id=HG03009_ch_G0000062;Parent=HG03009_ch_T0000207;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=exon:HG03009_ch_T0000207:1;Name=LOC105377231;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8024189	8024889	.	+	.	source_transcript=hg002_chrY_paternal_124.1;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.1,hg002_chrY_paternal_124.1;transcript_id=HG03009_ch_T0000207;gene_id=HG03009_ch_G0000062;Parent=HG03009_ch_T0000207;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=intron:HG03009_ch_T0000207:1;Name=LOC105377231;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8024890	8025042	.	+	.	source_transcript=hg002_chrY_paternal_124.1;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.1,hg002_chrY_paternal_124.1;transcript_id=HG03009_ch_T0000207;gene_id=HG03009_ch_G0000062;Parent=HG03009_ch_T0000207;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=exon:HG03009_ch_T0000207:2;Name=LOC105377231;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8025043	8028334	.	+	.	source_transcript=hg002_chrY_paternal_124.1;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.1,hg002_chrY_paternal_124.1;transcript_id=HG03009_ch_T0000207;gene_id=HG03009_ch_G0000062;Parent=HG03009_ch_T0000207;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=intron:HG03009_ch_T0000207:2;Name=LOC105377231;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8028335	8028522	.	+	.	source_transcript=hg002_chrY_paternal_124.1;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.1,hg002_chrY_paternal_124.1;transcript_id=HG03009_ch_T0000207;gene_id=HG03009_ch_G0000062;Parent=HG03009_ch_T0000207;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=exon:HG03009_ch_T0000207:3;Name=LOC105377231;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	8016255	8028522	1000	+	.	source_transcript=hg002_chrY_paternal_124.2;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.2,hg002_chrY_paternal_124.2;transcript_id=HG03009_ch_T0000208;gene_id=HG03009_ch_G0000062;Parent=HG03009_ch_G0000062;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=HG03009_ch_T0000208;Name=LOC105377231
HG03009_chrY	CAT	exon	8016255	8016340	.	+	.	source_transcript=hg002_chrY_paternal_124.2;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.2,hg002_chrY_paternal_124.2;transcript_id=HG03009_ch_T0000208;gene_id=HG03009_ch_G0000062;Parent=HG03009_ch_T0000208;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=exon:HG03009_ch_T0000208:0;Name=LOC105377231;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8016341	8023934	.	+	.	source_transcript=hg002_chrY_paternal_124.2;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.2,hg002_chrY_paternal_124.2;transcript_id=HG03009_ch_T0000208;gene_id=HG03009_ch_G0000062;Parent=HG03009_ch_T0000208;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=intron:HG03009_ch_T0000208:0;Name=LOC105377231;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8023935	8024178	.	+	.	source_transcript=hg002_chrY_paternal_124.2;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.2,hg002_chrY_paternal_124.2;transcript_id=HG03009_ch_T0000208;gene_id=HG03009_ch_G0000062;Parent=HG03009_ch_T0000208;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=exon:HG03009_ch_T0000208:1;Name=LOC105377231;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8024179	8024889	.	+	.	source_transcript=hg002_chrY_paternal_124.2;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.2,hg002_chrY_paternal_124.2;transcript_id=HG03009_ch_T0000208;gene_id=HG03009_ch_G0000062;Parent=HG03009_ch_T0000208;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=intron:HG03009_ch_T0000208:1;Name=LOC105377231;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8024890	8025042	.	+	.	source_transcript=hg002_chrY_paternal_124.2;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.2,hg002_chrY_paternal_124.2;transcript_id=HG03009_ch_T0000208;gene_id=HG03009_ch_G0000062;Parent=HG03009_ch_T0000208;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=exon:HG03009_ch_T0000208:2;Name=LOC105377231;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8025043	8028334	.	+	.	source_transcript=hg002_chrY_paternal_124.2;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.2,hg002_chrY_paternal_124.2;transcript_id=HG03009_ch_T0000208;gene_id=HG03009_ch_G0000062;Parent=HG03009_ch_T0000208;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=intron:HG03009_ch_T0000208:2;Name=LOC105377231;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8028335	8028522	.	+	.	source_transcript=hg002_chrY_paternal_124.2;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.2,hg002_chrY_paternal_124.2;transcript_id=HG03009_ch_T0000208;gene_id=HG03009_ch_G0000062;Parent=HG03009_ch_T0000208;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=exon:HG03009_ch_T0000208:3;Name=LOC105377231;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	8170242	8172453	.	-	.	source_gene_common_name=LOC105377232;source_gene=hg002_chrY_paternal_128;alternative_source_transcripts=hg002_chrY_paternal_128.1,hg002_chrY_paternal_128.1;gene_id=HG03009_ch_G0000063;gene_biotype=lncRNA;gene_name=LOC105377232;gene_sources=liftoff;ID=HG03009_ch_G0000063;Name=LOC105377232
HG03009_chrY	CAT	transcript	8170242	8172453	1000	-	.	source_transcript=hg002_chrY_paternal_128.1;source_transcript_name=hg002_chrY_paternal_128.1;source_gene=hg002_chrY_paternal_128;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_128;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_128.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_128.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377232;alternative_source_transcripts=hg002_chrY_paternal_128.1,hg002_chrY_paternal_128.1;transcript_id=HG03009_ch_T0000209;gene_id=HG03009_ch_G0000063;Parent=HG03009_ch_G0000063;transcript_name=hg002_chrY_paternal_128.1;gene_name=LOC105377232;ID=HG03009_ch_T0000209;Name=LOC105377232
HG03009_chrY	CAT	exon	8170242	8170256	.	-	.	source_transcript=hg002_chrY_paternal_128.1;source_transcript_name=hg002_chrY_paternal_128.1;source_gene=hg002_chrY_paternal_128;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_128;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_128.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_128.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377232;alternative_source_transcripts=hg002_chrY_paternal_128.1,hg002_chrY_paternal_128.1;transcript_id=HG03009_ch_T0000209;gene_id=HG03009_ch_G0000063;Parent=HG03009_ch_T0000209;transcript_name=hg002_chrY_paternal_128.1;gene_name=LOC105377232;ID=exon:HG03009_ch_T0000209:0;Name=LOC105377232;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8170257	8170942	.	-	.	source_transcript=hg002_chrY_paternal_128.1;source_transcript_name=hg002_chrY_paternal_128.1;source_gene=hg002_chrY_paternal_128;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_128;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_128.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_128.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377232;alternative_source_transcripts=hg002_chrY_paternal_128.1,hg002_chrY_paternal_128.1;transcript_id=HG03009_ch_T0000209;gene_id=HG03009_ch_G0000063;Parent=HG03009_ch_T0000209;transcript_name=hg002_chrY_paternal_128.1;gene_name=LOC105377232;ID=intron:HG03009_ch_T0000209:0;Name=LOC105377232;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8170943	8171017	.	-	.	source_transcript=hg002_chrY_paternal_128.1;source_transcript_name=hg002_chrY_paternal_128.1;source_gene=hg002_chrY_paternal_128;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_128;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_128.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_128.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377232;alternative_source_transcripts=hg002_chrY_paternal_128.1,hg002_chrY_paternal_128.1;transcript_id=HG03009_ch_T0000209;gene_id=HG03009_ch_G0000063;Parent=HG03009_ch_T0000209;transcript_name=hg002_chrY_paternal_128.1;gene_name=LOC105377232;ID=exon:HG03009_ch_T0000209:1;Name=LOC105377232;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8171018	8172439	.	-	.	source_transcript=hg002_chrY_paternal_128.1;source_transcript_name=hg002_chrY_paternal_128.1;source_gene=hg002_chrY_paternal_128;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_128;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_128.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_128.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377232;alternative_source_transcripts=hg002_chrY_paternal_128.1,hg002_chrY_paternal_128.1;transcript_id=HG03009_ch_T0000209;gene_id=HG03009_ch_G0000063;Parent=HG03009_ch_T0000209;transcript_name=hg002_chrY_paternal_128.1;gene_name=LOC105377232;ID=intron:HG03009_ch_T0000209:1;Name=LOC105377232;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8172440	8172453	.	-	.	source_transcript=hg002_chrY_paternal_128.1;source_transcript_name=hg002_chrY_paternal_128.1;source_gene=hg002_chrY_paternal_128;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_128;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_128.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_128.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377232;alternative_source_transcripts=hg002_chrY_paternal_128.1,hg002_chrY_paternal_128.1;transcript_id=HG03009_ch_T0000209;gene_id=HG03009_ch_G0000063;Parent=HG03009_ch_T0000209;transcript_name=hg002_chrY_paternal_128.1;gene_name=LOC105377232;ID=exon:HG03009_ch_T0000209:2;Name=LOC105377232;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	8181925	8183412	.	-	.	source_gene_common_name=LOC107987354;source_gene=hg002_chrY_paternal_129;alternative_source_transcripts=hg002_chrY_paternal_129.1,hg002_chrY_paternal_129.1;gene_id=HG03009_ch_G0000064;gene_biotype=lncRNA;gene_name=LOC107987354;gene_sources=liftoff;ID=HG03009_ch_G0000064;Name=LOC107987354
HG03009_chrY	CAT	transcript	8181925	8183412	1000	-	.	source_transcript=hg002_chrY_paternal_129.1;source_transcript_name=hg002_chrY_paternal_129.1;source_gene=hg002_chrY_paternal_129;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_129;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_129.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_129.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987354;alternative_source_transcripts=hg002_chrY_paternal_129.1,hg002_chrY_paternal_129.1;transcript_id=HG03009_ch_T0000210;gene_id=HG03009_ch_G0000064;Parent=HG03009_ch_G0000064;transcript_name=hg002_chrY_paternal_129.1;gene_name=LOC107987354;ID=HG03009_ch_T0000210;Name=LOC107987354
HG03009_chrY	CAT	exon	8181925	8182083	.	-	.	source_transcript=hg002_chrY_paternal_129.1;source_transcript_name=hg002_chrY_paternal_129.1;source_gene=hg002_chrY_paternal_129;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_129;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_129.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_129.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987354;alternative_source_transcripts=hg002_chrY_paternal_129.1,hg002_chrY_paternal_129.1;transcript_id=HG03009_ch_T0000210;gene_id=HG03009_ch_G0000064;Parent=HG03009_ch_T0000210;transcript_name=hg002_chrY_paternal_129.1;gene_name=LOC107987354;ID=exon:HG03009_ch_T0000210:0;Name=LOC107987354;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8182084	8182235	.	-	.	source_transcript=hg002_chrY_paternal_129.1;source_transcript_name=hg002_chrY_paternal_129.1;source_gene=hg002_chrY_paternal_129;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_129;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_129.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_129.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987354;alternative_source_transcripts=hg002_chrY_paternal_129.1,hg002_chrY_paternal_129.1;transcript_id=HG03009_ch_T0000210;gene_id=HG03009_ch_G0000064;Parent=HG03009_ch_T0000210;transcript_name=hg002_chrY_paternal_129.1;gene_name=LOC107987354;ID=intron:HG03009_ch_T0000210:0;Name=LOC107987354;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8182236	8182310	.	-	.	source_transcript=hg002_chrY_paternal_129.1;source_transcript_name=hg002_chrY_paternal_129.1;source_gene=hg002_chrY_paternal_129;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_129;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_129.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_129.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987354;alternative_source_transcripts=hg002_chrY_paternal_129.1,hg002_chrY_paternal_129.1;transcript_id=HG03009_ch_T0000210;gene_id=HG03009_ch_G0000064;Parent=HG03009_ch_T0000210;transcript_name=hg002_chrY_paternal_129.1;gene_name=LOC107987354;ID=exon:HG03009_ch_T0000210:1;Name=LOC107987354;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8182311	8183274	.	-	.	source_transcript=hg002_chrY_paternal_129.1;source_transcript_name=hg002_chrY_paternal_129.1;source_gene=hg002_chrY_paternal_129;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_129;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_129.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_129.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987354;alternative_source_transcripts=hg002_chrY_paternal_129.1,hg002_chrY_paternal_129.1;transcript_id=HG03009_ch_T0000210;gene_id=HG03009_ch_G0000064;Parent=HG03009_ch_T0000210;transcript_name=hg002_chrY_paternal_129.1;gene_name=LOC107987354;ID=intron:HG03009_ch_T0000210:1;Name=LOC107987354;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8183275	8183412	.	-	.	source_transcript=hg002_chrY_paternal_129.1;source_transcript_name=hg002_chrY_paternal_129.1;source_gene=hg002_chrY_paternal_129;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_129;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_129.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_129.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987354;alternative_source_transcripts=hg002_chrY_paternal_129.1,hg002_chrY_paternal_129.1;transcript_id=HG03009_ch_T0000210;gene_id=HG03009_ch_G0000064;Parent=HG03009_ch_T0000210;transcript_name=hg002_chrY_paternal_129.1;gene_name=LOC107987354;ID=exon:HG03009_ch_T0000210:2;Name=LOC107987354;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	8259598	8266433	.	+	.	source_gene_common_name=LINC00279;source_gene=hg002_chrY_paternal_130;alternative_source_transcripts=hg002_chrY_paternal_130.1,hg002_chrY_paternal_130.1;gene_id=HG03009_ch_G0000065;gene_biotype=lncRNA;gene_name=LINC00279;gene_sources=liftoff;ID=HG03009_ch_G0000065;Name=LINC00279
HG03009_chrY	CAT	transcript	8259598	8266433	1000	+	.	source_transcript=hg002_chrY_paternal_130.1;source_transcript_name=hg002_chrY_paternal_130.1;source_gene=hg002_chrY_paternal_130;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_130;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_130.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_130.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;alternative_source_transcripts=hg002_chrY_paternal_130.1,hg002_chrY_paternal_130.1;transcript_id=HG03009_ch_T0000211;gene_id=HG03009_ch_G0000065;Parent=HG03009_ch_G0000065;transcript_name=hg002_chrY_paternal_130.1;gene_name=LINC00279;ID=HG03009_ch_T0000211;Name=LINC00279
HG03009_chrY	CAT	exon	8259598	8259710	.	+	.	source_transcript=hg002_chrY_paternal_130.1;source_transcript_name=hg002_chrY_paternal_130.1;source_gene=hg002_chrY_paternal_130;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_130;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_130.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_130.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;alternative_source_transcripts=hg002_chrY_paternal_130.1,hg002_chrY_paternal_130.1;transcript_id=HG03009_ch_T0000211;gene_id=HG03009_ch_G0000065;Parent=HG03009_ch_T0000211;transcript_name=hg002_chrY_paternal_130.1;gene_name=LINC00279;ID=exon:HG03009_ch_T0000211:0;Name=LINC00279;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8259711	8265435	.	+	.	source_transcript=hg002_chrY_paternal_130.1;source_transcript_name=hg002_chrY_paternal_130.1;source_gene=hg002_chrY_paternal_130;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_130;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_130.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_130.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;alternative_source_transcripts=hg002_chrY_paternal_130.1,hg002_chrY_paternal_130.1;transcript_id=HG03009_ch_T0000211;gene_id=HG03009_ch_G0000065;Parent=HG03009_ch_T0000211;transcript_name=hg002_chrY_paternal_130.1;gene_name=LINC00279;ID=intron:HG03009_ch_T0000211:0;Name=LINC00279;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8265436	8265631	.	+	.	source_transcript=hg002_chrY_paternal_130.1;source_transcript_name=hg002_chrY_paternal_130.1;source_gene=hg002_chrY_paternal_130;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_130;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_130.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_130.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;alternative_source_transcripts=hg002_chrY_paternal_130.1,hg002_chrY_paternal_130.1;transcript_id=HG03009_ch_T0000211;gene_id=HG03009_ch_G0000065;Parent=HG03009_ch_T0000211;transcript_name=hg002_chrY_paternal_130.1;gene_name=LINC00279;ID=exon:HG03009_ch_T0000211:1;Name=LINC00279;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8265632	8265982	.	+	.	source_transcript=hg002_chrY_paternal_130.1;source_transcript_name=hg002_chrY_paternal_130.1;source_gene=hg002_chrY_paternal_130;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_130;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_130.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_130.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;alternative_source_transcripts=hg002_chrY_paternal_130.1,hg002_chrY_paternal_130.1;transcript_id=HG03009_ch_T0000211;gene_id=HG03009_ch_G0000065;Parent=HG03009_ch_T0000211;transcript_name=hg002_chrY_paternal_130.1;gene_name=LINC00279;ID=intron:HG03009_ch_T0000211:1;Name=LINC00279;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8265983	8266225	.	+	.	source_transcript=hg002_chrY_paternal_130.1;source_transcript_name=hg002_chrY_paternal_130.1;source_gene=hg002_chrY_paternal_130;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_130;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_130.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_130.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;alternative_source_transcripts=hg002_chrY_paternal_130.1,hg002_chrY_paternal_130.1;transcript_id=HG03009_ch_T0000211;gene_id=HG03009_ch_G0000065;Parent=HG03009_ch_T0000211;transcript_name=hg002_chrY_paternal_130.1;gene_name=LINC00279;ID=exon:HG03009_ch_T0000211:2;Name=LINC00279;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8266226	8266357	.	+	.	source_transcript=hg002_chrY_paternal_130.1;source_transcript_name=hg002_chrY_paternal_130.1;source_gene=hg002_chrY_paternal_130;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_130;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_130.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_130.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;alternative_source_transcripts=hg002_chrY_paternal_130.1,hg002_chrY_paternal_130.1;transcript_id=HG03009_ch_T0000211;gene_id=HG03009_ch_G0000065;Parent=HG03009_ch_T0000211;transcript_name=hg002_chrY_paternal_130.1;gene_name=LINC00279;ID=intron:HG03009_ch_T0000211:2;Name=LINC00279;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8266358	8266433	.	+	.	source_transcript=hg002_chrY_paternal_130.1;source_transcript_name=hg002_chrY_paternal_130.1;source_gene=hg002_chrY_paternal_130;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_130;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_130.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_130.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;alternative_source_transcripts=hg002_chrY_paternal_130.1,hg002_chrY_paternal_130.1;transcript_id=HG03009_ch_T0000211;gene_id=HG03009_ch_G0000065;Parent=HG03009_ch_T0000211;transcript_name=hg002_chrY_paternal_130.1;gene_name=LINC00279;ID=exon:HG03009_ch_T0000211:3;Name=LINC00279;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	8281346	8282187	.	+	.	source_gene_common_name=LOC107987340;source_gene=hg002_chrY_paternal_131;alternative_source_transcripts=hg002_chrY_paternal_131.1,hg002_chrY_paternal_131.1;gene_id=HG03009_ch_G0000066;gene_biotype=lncRNA;gene_name=LOC107987340;gene_sources=liftoff;ID=HG03009_ch_G0000066;Name=LOC107987340
HG03009_chrY	CAT	transcript	8281346	8282187	1000	+	.	source_transcript=hg002_chrY_paternal_131.1;source_transcript_name=hg002_chrY_paternal_131.1;source_gene=hg002_chrY_paternal_131;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_131;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_131.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_131.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987340;alternative_source_transcripts=hg002_chrY_paternal_131.1,hg002_chrY_paternal_131.1;transcript_id=HG03009_ch_T0000212;gene_id=HG03009_ch_G0000066;Parent=HG03009_ch_G0000066;transcript_name=hg002_chrY_paternal_131.1;gene_name=LOC107987340;ID=HG03009_ch_T0000212;Name=LOC107987340
HG03009_chrY	CAT	exon	8281346	8281467	.	+	.	source_transcript=hg002_chrY_paternal_131.1;source_transcript_name=hg002_chrY_paternal_131.1;source_gene=hg002_chrY_paternal_131;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_131;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_131.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_131.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987340;alternative_source_transcripts=hg002_chrY_paternal_131.1,hg002_chrY_paternal_131.1;transcript_id=HG03009_ch_T0000212;gene_id=HG03009_ch_G0000066;Parent=HG03009_ch_T0000212;transcript_name=hg002_chrY_paternal_131.1;gene_name=LOC107987340;ID=exon:HG03009_ch_T0000212:0;Name=LOC107987340;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8281468	8281802	.	+	.	source_transcript=hg002_chrY_paternal_131.1;source_transcript_name=hg002_chrY_paternal_131.1;source_gene=hg002_chrY_paternal_131;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_131;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_131.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_131.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987340;alternative_source_transcripts=hg002_chrY_paternal_131.1,hg002_chrY_paternal_131.1;transcript_id=HG03009_ch_T0000212;gene_id=HG03009_ch_G0000066;Parent=HG03009_ch_T0000212;transcript_name=hg002_chrY_paternal_131.1;gene_name=LOC107987340;ID=intron:HG03009_ch_T0000212:0;Name=LOC107987340;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8281803	8282187	.	+	.	source_transcript=hg002_chrY_paternal_131.1;source_transcript_name=hg002_chrY_paternal_131.1;source_gene=hg002_chrY_paternal_131;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_131;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_131.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_131.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987340;alternative_source_transcripts=hg002_chrY_paternal_131.1,hg002_chrY_paternal_131.1;transcript_id=HG03009_ch_T0000212;gene_id=HG03009_ch_G0000066;Parent=HG03009_ch_T0000212;transcript_name=hg002_chrY_paternal_131.1;gene_name=LOC107987340;ID=exon:HG03009_ch_T0000212:1;Name=LOC107987340;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	8304674	8305182	.	-	.	source_gene_common_name=TTTY18;source_gene=hg002_chrY_paternal_132;alternative_source_transcripts=hg002_chrY_paternal_132.1,hg002_chrY_paternal_132.1;gene_id=HG03009_ch_G0000067;gene_biotype=lncRNA;gene_name=TTTY18;gene_sources=liftoff;ID=HG03009_ch_G0000067;Name=TTTY18
HG03009_chrY	CAT	transcript	8304674	8305182	1000	-	.	source_transcript=hg002_chrY_paternal_132.1;source_transcript_name=hg002_chrY_paternal_132.1;source_gene=hg002_chrY_paternal_132;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_132;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_132.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_132.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=hg002_chrY_paternal_132.1,hg002_chrY_paternal_132.1;transcript_id=HG03009_ch_T0000213;gene_id=HG03009_ch_G0000067;Parent=HG03009_ch_G0000067;transcript_name=hg002_chrY_paternal_132.1;gene_name=TTTY18;ID=HG03009_ch_T0000213;Name=TTTY18
HG03009_chrY	CAT	exon	8304674	8304736	.	-	.	source_transcript=hg002_chrY_paternal_132.1;source_transcript_name=hg002_chrY_paternal_132.1;source_gene=hg002_chrY_paternal_132;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_132;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_132.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_132.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=hg002_chrY_paternal_132.1,hg002_chrY_paternal_132.1;transcript_id=HG03009_ch_T0000213;gene_id=HG03009_ch_G0000067;Parent=HG03009_ch_T0000213;transcript_name=hg002_chrY_paternal_132.1;gene_name=TTTY18;ID=exon:HG03009_ch_T0000213:0;Name=TTTY18;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8304737	8305024	.	-	.	source_transcript=hg002_chrY_paternal_132.1;source_transcript_name=hg002_chrY_paternal_132.1;source_gene=hg002_chrY_paternal_132;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_132;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_132.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_132.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=hg002_chrY_paternal_132.1,hg002_chrY_paternal_132.1;transcript_id=HG03009_ch_T0000213;gene_id=HG03009_ch_G0000067;Parent=HG03009_ch_T0000213;transcript_name=hg002_chrY_paternal_132.1;gene_name=TTTY18;ID=intron:HG03009_ch_T0000213:0;Name=TTTY18;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8305025	8305182	.	-	.	source_transcript=hg002_chrY_paternal_132.1;source_transcript_name=hg002_chrY_paternal_132.1;source_gene=hg002_chrY_paternal_132;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_132;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_132.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_132.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=hg002_chrY_paternal_132.1,hg002_chrY_paternal_132.1;transcript_id=HG03009_ch_T0000213;gene_id=HG03009_ch_G0000067;Parent=HG03009_ch_T0000213;transcript_name=hg002_chrY_paternal_132.1;gene_name=TTTY18;ID=exon:HG03009_ch_T0000213:1;Name=TTTY18;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	8315201	8316622	.	-	.	source_gene_common_name=LOC105377234;source_gene=hg002_chrY_paternal_133;alternative_source_transcripts=hg002_chrY_paternal_133.1,hg002_chrY_paternal_133.1;gene_id=HG03009_ch_G0000068;gene_biotype=lncRNA;gene_name=LOC105377234;gene_sources=liftoff;ID=HG03009_ch_G0000068;Name=LOC105377234
HG03009_chrY	CAT	transcript	8315201	8316622	1000	-	.	source_transcript=hg002_chrY_paternal_133.1;source_transcript_name=hg002_chrY_paternal_133.1;source_gene=hg002_chrY_paternal_133;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_133;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_133.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_133.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377234;alternative_source_transcripts=hg002_chrY_paternal_133.1,hg002_chrY_paternal_133.1;transcript_id=HG03009_ch_T0000214;gene_id=HG03009_ch_G0000068;Parent=HG03009_ch_G0000068;transcript_name=hg002_chrY_paternal_133.1;gene_name=LOC105377234;ID=HG03009_ch_T0000214;Name=LOC105377234
HG03009_chrY	CAT	exon	8315201	8315287	.	-	.	source_transcript=hg002_chrY_paternal_133.1;source_transcript_name=hg002_chrY_paternal_133.1;source_gene=hg002_chrY_paternal_133;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_133;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_133.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_133.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377234;alternative_source_transcripts=hg002_chrY_paternal_133.1,hg002_chrY_paternal_133.1;transcript_id=HG03009_ch_T0000214;gene_id=HG03009_ch_G0000068;Parent=HG03009_ch_T0000214;transcript_name=hg002_chrY_paternal_133.1;gene_name=LOC105377234;ID=exon:HG03009_ch_T0000214:0;Name=LOC105377234;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8315288	8315771	.	-	.	source_transcript=hg002_chrY_paternal_133.1;source_transcript_name=hg002_chrY_paternal_133.1;source_gene=hg002_chrY_paternal_133;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_133;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_133.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_133.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377234;alternative_source_transcripts=hg002_chrY_paternal_133.1,hg002_chrY_paternal_133.1;transcript_id=HG03009_ch_T0000214;gene_id=HG03009_ch_G0000068;Parent=HG03009_ch_T0000214;transcript_name=hg002_chrY_paternal_133.1;gene_name=LOC105377234;ID=intron:HG03009_ch_T0000214:0;Name=LOC105377234;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8315772	8315849	.	-	.	source_transcript=hg002_chrY_paternal_133.1;source_transcript_name=hg002_chrY_paternal_133.1;source_gene=hg002_chrY_paternal_133;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_133;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_133.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_133.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377234;alternative_source_transcripts=hg002_chrY_paternal_133.1,hg002_chrY_paternal_133.1;transcript_id=HG03009_ch_T0000214;gene_id=HG03009_ch_G0000068;Parent=HG03009_ch_T0000214;transcript_name=hg002_chrY_paternal_133.1;gene_name=LOC105377234;ID=exon:HG03009_ch_T0000214:1;Name=LOC105377234;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8315850	8316430	.	-	.	source_transcript=hg002_chrY_paternal_133.1;source_transcript_name=hg002_chrY_paternal_133.1;source_gene=hg002_chrY_paternal_133;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_133;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_133.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_133.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377234;alternative_source_transcripts=hg002_chrY_paternal_133.1,hg002_chrY_paternal_133.1;transcript_id=HG03009_ch_T0000214;gene_id=HG03009_ch_G0000068;Parent=HG03009_ch_T0000214;transcript_name=hg002_chrY_paternal_133.1;gene_name=LOC105377234;ID=intron:HG03009_ch_T0000214:1;Name=LOC105377234;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8316431	8316622	.	-	.	source_transcript=hg002_chrY_paternal_133.1;source_transcript_name=hg002_chrY_paternal_133.1;source_gene=hg002_chrY_paternal_133;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_133;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_133.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_133.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377234;alternative_source_transcripts=hg002_chrY_paternal_133.1,hg002_chrY_paternal_133.1;transcript_id=HG03009_ch_T0000214;gene_id=HG03009_ch_G0000068;Parent=HG03009_ch_T0000214;transcript_name=hg002_chrY_paternal_133.1;gene_name=LOC105377234;ID=exon:HG03009_ch_T0000214:2;Name=LOC105377234;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	8325798	8326609	.	+	.	source_gene_common_name=TTTY19;source_gene=hg002_chrY_paternal_134;alternative_source_transcripts=hg002_chrY_paternal_134.1,hg002_chrY_paternal_134.1;gene_id=HG03009_ch_G0000069;gene_biotype=lncRNA;gene_name=TTTY19;gene_sources=liftoff;ID=HG03009_ch_G0000069;Name=TTTY19
HG03009_chrY	CAT	transcript	8325798	8326609	1000	+	.	source_transcript=hg002_chrY_paternal_134.1;source_transcript_name=hg002_chrY_paternal_134.1;source_gene=hg002_chrY_paternal_134;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_134;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_134.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_134.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY19;alternative_source_transcripts=hg002_chrY_paternal_134.1,hg002_chrY_paternal_134.1;transcript_id=HG03009_ch_T0000215;gene_id=HG03009_ch_G0000069;Parent=HG03009_ch_G0000069;transcript_name=hg002_chrY_paternal_134.1;gene_name=TTTY19;ID=HG03009_ch_T0000215;Name=TTTY19
HG03009_chrY	CAT	exon	8325798	8325885	.	+	.	source_transcript=hg002_chrY_paternal_134.1;source_transcript_name=hg002_chrY_paternal_134.1;source_gene=hg002_chrY_paternal_134;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_134;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_134.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_134.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY19;alternative_source_transcripts=hg002_chrY_paternal_134.1,hg002_chrY_paternal_134.1;transcript_id=HG03009_ch_T0000215;gene_id=HG03009_ch_G0000069;Parent=HG03009_ch_T0000215;transcript_name=hg002_chrY_paternal_134.1;gene_name=TTTY19;ID=exon:HG03009_ch_T0000215:0;Name=TTTY19;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8325886	8326428	.	+	.	source_transcript=hg002_chrY_paternal_134.1;source_transcript_name=hg002_chrY_paternal_134.1;source_gene=hg002_chrY_paternal_134;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_134;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_134.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_134.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY19;alternative_source_transcripts=hg002_chrY_paternal_134.1,hg002_chrY_paternal_134.1;transcript_id=HG03009_ch_T0000215;gene_id=HG03009_ch_G0000069;Parent=HG03009_ch_T0000215;transcript_name=hg002_chrY_paternal_134.1;gene_name=TTTY19;ID=intron:HG03009_ch_T0000215:0;Name=TTTY19;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8326429	8326609	.	+	.	source_transcript=hg002_chrY_paternal_134.1;source_transcript_name=hg002_chrY_paternal_134.1;source_gene=hg002_chrY_paternal_134;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_134;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_134.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_134.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY19;alternative_source_transcripts=hg002_chrY_paternal_134.1,hg002_chrY_paternal_134.1;transcript_id=HG03009_ch_T0000215;gene_id=HG03009_ch_G0000069;Parent=HG03009_ch_T0000215;transcript_name=hg002_chrY_paternal_134.1;gene_name=TTTY19;ID=exon:HG03009_ch_T0000215:1;Name=TTTY19;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	8343134	8345619	.	-	.	source_gene_common_name=LOC105377235;source_gene=hg002_chrY_paternal_135;alternative_source_transcripts=hg002_chrY_paternal_135.1,hg002_chrY_paternal_135.1;gene_id=HG03009_ch_G0000070;gene_biotype=lncRNA;gene_name=LOC105377235;gene_sources=liftoff;ID=HG03009_ch_G0000070;Name=LOC105377235
HG03009_chrY	CAT	transcript	8343134	8345619	1000	-	.	source_transcript=hg002_chrY_paternal_135.1;source_transcript_name=hg002_chrY_paternal_135.1;source_gene=hg002_chrY_paternal_135;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_135;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_135.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_135.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377235;alternative_source_transcripts=hg002_chrY_paternal_135.1,hg002_chrY_paternal_135.1;transcript_id=HG03009_ch_T0000216;gene_id=HG03009_ch_G0000070;Parent=HG03009_ch_G0000070;transcript_name=hg002_chrY_paternal_135.1;gene_name=LOC105377235;ID=HG03009_ch_T0000216;Name=LOC105377235
HG03009_chrY	CAT	exon	8343134	8343417	.	-	.	source_transcript=hg002_chrY_paternal_135.1;source_transcript_name=hg002_chrY_paternal_135.1;source_gene=hg002_chrY_paternal_135;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_135;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_135.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_135.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377235;alternative_source_transcripts=hg002_chrY_paternal_135.1,hg002_chrY_paternal_135.1;transcript_id=HG03009_ch_T0000216;gene_id=HG03009_ch_G0000070;Parent=HG03009_ch_T0000216;transcript_name=hg002_chrY_paternal_135.1;gene_name=LOC105377235;ID=exon:HG03009_ch_T0000216:0;Name=LOC105377235;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8343418	8343514	.	-	.	source_transcript=hg002_chrY_paternal_135.1;source_transcript_name=hg002_chrY_paternal_135.1;source_gene=hg002_chrY_paternal_135;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_135;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_135.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_135.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377235;alternative_source_transcripts=hg002_chrY_paternal_135.1,hg002_chrY_paternal_135.1;transcript_id=HG03009_ch_T0000216;gene_id=HG03009_ch_G0000070;Parent=HG03009_ch_T0000216;transcript_name=hg002_chrY_paternal_135.1;gene_name=LOC105377235;ID=intron:HG03009_ch_T0000216:0;Name=LOC105377235;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8343515	8343610	.	-	.	source_transcript=hg002_chrY_paternal_135.1;source_transcript_name=hg002_chrY_paternal_135.1;source_gene=hg002_chrY_paternal_135;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_135;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_135.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_135.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377235;alternative_source_transcripts=hg002_chrY_paternal_135.1,hg002_chrY_paternal_135.1;transcript_id=HG03009_ch_T0000216;gene_id=HG03009_ch_G0000070;Parent=HG03009_ch_T0000216;transcript_name=hg002_chrY_paternal_135.1;gene_name=LOC105377235;ID=exon:HG03009_ch_T0000216:1;Name=LOC105377235;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8343611	8343700	.	-	.	source_transcript=hg002_chrY_paternal_135.1;source_transcript_name=hg002_chrY_paternal_135.1;source_gene=hg002_chrY_paternal_135;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_135;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_135.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_135.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377235;alternative_source_transcripts=hg002_chrY_paternal_135.1,hg002_chrY_paternal_135.1;transcript_id=HG03009_ch_T0000216;gene_id=HG03009_ch_G0000070;Parent=HG03009_ch_T0000216;transcript_name=hg002_chrY_paternal_135.1;gene_name=LOC105377235;ID=intron:HG03009_ch_T0000216:1;Name=LOC105377235;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8343701	8343963	.	-	.	source_transcript=hg002_chrY_paternal_135.1;source_transcript_name=hg002_chrY_paternal_135.1;source_gene=hg002_chrY_paternal_135;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_135;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_135.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_135.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377235;alternative_source_transcripts=hg002_chrY_paternal_135.1,hg002_chrY_paternal_135.1;transcript_id=HG03009_ch_T0000216;gene_id=HG03009_ch_G0000070;Parent=HG03009_ch_T0000216;transcript_name=hg002_chrY_paternal_135.1;gene_name=LOC105377235;ID=exon:HG03009_ch_T0000216:2;Name=LOC105377235;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8343964	8345431	.	-	.	source_transcript=hg002_chrY_paternal_135.1;source_transcript_name=hg002_chrY_paternal_135.1;source_gene=hg002_chrY_paternal_135;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_135;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_135.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_135.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377235;alternative_source_transcripts=hg002_chrY_paternal_135.1,hg002_chrY_paternal_135.1;transcript_id=HG03009_ch_T0000216;gene_id=HG03009_ch_G0000070;Parent=HG03009_ch_T0000216;transcript_name=hg002_chrY_paternal_135.1;gene_name=LOC105377235;ID=intron:HG03009_ch_T0000216:2;Name=LOC105377235;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8345432	8345619	.	-	.	source_transcript=hg002_chrY_paternal_135.1;source_transcript_name=hg002_chrY_paternal_135.1;source_gene=hg002_chrY_paternal_135;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_135;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_135.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_135.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377235;alternative_source_transcripts=hg002_chrY_paternal_135.1,hg002_chrY_paternal_135.1;transcript_id=HG03009_ch_T0000216;gene_id=HG03009_ch_G0000070;Parent=HG03009_ch_T0000216;transcript_name=hg002_chrY_paternal_135.1;gene_name=LOC105377235;ID=exon:HG03009_ch_T0000216:3;Name=LOC105377235;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	8404635	8438704	.	-	.	source_gene_common_name=TTTY11;source_gene=hg002_chrY_paternal_136;alternative_source_transcripts=hg002_chrY_paternal_136.1,hg002_chrY_paternal_136.1;gene_id=HG03009_ch_G0000071;gene_biotype=lncRNA;gene_name=TTTY11;gene_sources=liftoff;ID=HG03009_ch_G0000071;Name=TTTY11
HG03009_chrY	CAT	transcript	8404635	8438704	1000	-	.	source_transcript=hg002_chrY_paternal_136.1;source_transcript_name=hg002_chrY_paternal_136.1;source_gene=hg002_chrY_paternal_136;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_136;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_136.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_136.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;alternative_source_transcripts=hg002_chrY_paternal_136.1,hg002_chrY_paternal_136.1;transcript_id=HG03009_ch_T0000217;gene_id=HG03009_ch_G0000071;Parent=HG03009_ch_G0000071;transcript_name=hg002_chrY_paternal_136.1;gene_name=TTTY11;ID=HG03009_ch_T0000217;Name=TTTY11
HG03009_chrY	CAT	exon	8404635	8404728	.	-	.	source_transcript=hg002_chrY_paternal_136.1;source_transcript_name=hg002_chrY_paternal_136.1;source_gene=hg002_chrY_paternal_136;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_136;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_136.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;alternative_source_transcripts=hg002_chrY_paternal_136.1,hg002_chrY_paternal_136.1;transcript_id=HG03009_ch_T0000217;gene_id=HG03009_ch_G0000071;Parent=HG03009_ch_T0000217;transcript_name=hg002_chrY_paternal_136.1;gene_name=TTTY11;ID=exon:HG03009_ch_T0000217:0;Name=TTTY11;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8404729	8405209	.	-	.	source_transcript=hg002_chrY_paternal_136.1;source_transcript_name=hg002_chrY_paternal_136.1;source_gene=hg002_chrY_paternal_136;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_136;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_136.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;alternative_source_transcripts=hg002_chrY_paternal_136.1,hg002_chrY_paternal_136.1;transcript_id=HG03009_ch_T0000217;gene_id=HG03009_ch_G0000071;Parent=HG03009_ch_T0000217;transcript_name=hg002_chrY_paternal_136.1;gene_name=TTTY11;ID=intron:HG03009_ch_T0000217:0;Name=TTTY11;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8405210	8405525	.	-	.	source_transcript=hg002_chrY_paternal_136.1;source_transcript_name=hg002_chrY_paternal_136.1;source_gene=hg002_chrY_paternal_136;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_136;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_136.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;alternative_source_transcripts=hg002_chrY_paternal_136.1,hg002_chrY_paternal_136.1;transcript_id=HG03009_ch_T0000217;gene_id=HG03009_ch_G0000071;Parent=HG03009_ch_T0000217;transcript_name=hg002_chrY_paternal_136.1;gene_name=TTTY11;ID=exon:HG03009_ch_T0000217:1;Name=TTTY11;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8405526	8410321	.	-	.	source_transcript=hg002_chrY_paternal_136.1;source_transcript_name=hg002_chrY_paternal_136.1;source_gene=hg002_chrY_paternal_136;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_136;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_136.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;alternative_source_transcripts=hg002_chrY_paternal_136.1,hg002_chrY_paternal_136.1;transcript_id=HG03009_ch_T0000217;gene_id=HG03009_ch_G0000071;Parent=HG03009_ch_T0000217;transcript_name=hg002_chrY_paternal_136.1;gene_name=TTTY11;ID=intron:HG03009_ch_T0000217:1;Name=TTTY11;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8410322	8410624	.	-	.	source_transcript=hg002_chrY_paternal_136.1;source_transcript_name=hg002_chrY_paternal_136.1;source_gene=hg002_chrY_paternal_136;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_136;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_136.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;alternative_source_transcripts=hg002_chrY_paternal_136.1,hg002_chrY_paternal_136.1;transcript_id=HG03009_ch_T0000217;gene_id=HG03009_ch_G0000071;Parent=HG03009_ch_T0000217;transcript_name=hg002_chrY_paternal_136.1;gene_name=TTTY11;ID=exon:HG03009_ch_T0000217:2;Name=TTTY11;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8410625	8416183	.	-	.	source_transcript=hg002_chrY_paternal_136.1;source_transcript_name=hg002_chrY_paternal_136.1;source_gene=hg002_chrY_paternal_136;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_136;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_136.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;alternative_source_transcripts=hg002_chrY_paternal_136.1,hg002_chrY_paternal_136.1;transcript_id=HG03009_ch_T0000217;gene_id=HG03009_ch_G0000071;Parent=HG03009_ch_T0000217;transcript_name=hg002_chrY_paternal_136.1;gene_name=TTTY11;ID=intron:HG03009_ch_T0000217:2;Name=TTTY11;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8416184	8416267	.	-	.	source_transcript=hg002_chrY_paternal_136.1;source_transcript_name=hg002_chrY_paternal_136.1;source_gene=hg002_chrY_paternal_136;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_136;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_136.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;alternative_source_transcripts=hg002_chrY_paternal_136.1,hg002_chrY_paternal_136.1;transcript_id=HG03009_ch_T0000217;gene_id=HG03009_ch_G0000071;Parent=HG03009_ch_T0000217;transcript_name=hg002_chrY_paternal_136.1;gene_name=TTTY11;ID=exon:HG03009_ch_T0000217:3;Name=TTTY11;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8416268	8438667	.	-	.	source_transcript=hg002_chrY_paternal_136.1;source_transcript_name=hg002_chrY_paternal_136.1;source_gene=hg002_chrY_paternal_136;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_136;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_136.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;alternative_source_transcripts=hg002_chrY_paternal_136.1,hg002_chrY_paternal_136.1;transcript_id=HG03009_ch_T0000217;gene_id=HG03009_ch_G0000071;Parent=HG03009_ch_T0000217;transcript_name=hg002_chrY_paternal_136.1;gene_name=TTTY11;ID=intron:HG03009_ch_T0000217:3;Name=TTTY11;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8438668	8438704	.	-	.	source_transcript=hg002_chrY_paternal_136.1;source_transcript_name=hg002_chrY_paternal_136.1;source_gene=hg002_chrY_paternal_136;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_136;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_136.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;alternative_source_transcripts=hg002_chrY_paternal_136.1,hg002_chrY_paternal_136.1;transcript_id=HG03009_ch_T0000217;gene_id=HG03009_ch_G0000071;Parent=HG03009_ch_T0000217;transcript_name=hg002_chrY_paternal_136.1;gene_name=TTTY11;ID=exon:HG03009_ch_T0000217:4;Name=TTTY11;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	8836232	8841096	.	+	.	source_gene_common_name=LOC105379264;source_gene=hg002_chrY_paternal_145;alternative_source_transcripts=hg002_chrY_paternal_145.1,hg002_chrY_paternal_145.1;gene_id=HG03009_ch_G0000072;gene_biotype=lncRNA;gene_name=LOC105379264;gene_sources=liftoff;ID=HG03009_ch_G0000072;Name=LOC105379264
HG03009_chrY	CAT	transcript	8836232	8841096	1000	+	.	source_transcript=hg002_chrY_paternal_145.1;source_transcript_name=hg002_chrY_paternal_145.1;source_gene=hg002_chrY_paternal_145;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_145;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_145.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_145.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379264;alternative_source_transcripts=hg002_chrY_paternal_145.1,hg002_chrY_paternal_145.1;transcript_id=HG03009_ch_T0000218;gene_id=HG03009_ch_G0000072;Parent=HG03009_ch_G0000072;transcript_name=hg002_chrY_paternal_145.1;gene_name=LOC105379264;ID=HG03009_ch_T0000218;Name=LOC105379264
HG03009_chrY	CAT	exon	8836232	8836306	.	+	.	source_transcript=hg002_chrY_paternal_145.1;source_transcript_name=hg002_chrY_paternal_145.1;source_gene=hg002_chrY_paternal_145;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_145;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_145.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_145.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379264;alternative_source_transcripts=hg002_chrY_paternal_145.1,hg002_chrY_paternal_145.1;transcript_id=HG03009_ch_T0000218;gene_id=HG03009_ch_G0000072;Parent=HG03009_ch_T0000218;transcript_name=hg002_chrY_paternal_145.1;gene_name=LOC105379264;ID=exon:HG03009_ch_T0000218:0;Name=LOC105379264;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8836307	8836460	.	+	.	source_transcript=hg002_chrY_paternal_145.1;source_transcript_name=hg002_chrY_paternal_145.1;source_gene=hg002_chrY_paternal_145;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_145;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_145.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_145.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379264;alternative_source_transcripts=hg002_chrY_paternal_145.1,hg002_chrY_paternal_145.1;transcript_id=HG03009_ch_T0000218;gene_id=HG03009_ch_G0000072;Parent=HG03009_ch_T0000218;transcript_name=hg002_chrY_paternal_145.1;gene_name=LOC105379264;ID=intron:HG03009_ch_T0000218:0;Name=LOC105379264;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8836461	8836565	.	+	.	source_transcript=hg002_chrY_paternal_145.1;source_transcript_name=hg002_chrY_paternal_145.1;source_gene=hg002_chrY_paternal_145;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_145;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_145.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_145.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379264;alternative_source_transcripts=hg002_chrY_paternal_145.1,hg002_chrY_paternal_145.1;transcript_id=HG03009_ch_T0000218;gene_id=HG03009_ch_G0000072;Parent=HG03009_ch_T0000218;transcript_name=hg002_chrY_paternal_145.1;gene_name=LOC105379264;ID=exon:HG03009_ch_T0000218:1;Name=LOC105379264;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8836566	8838627	.	+	.	source_transcript=hg002_chrY_paternal_145.1;source_transcript_name=hg002_chrY_paternal_145.1;source_gene=hg002_chrY_paternal_145;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_145;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_145.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_145.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379264;alternative_source_transcripts=hg002_chrY_paternal_145.1,hg002_chrY_paternal_145.1;transcript_id=HG03009_ch_T0000218;gene_id=HG03009_ch_G0000072;Parent=HG03009_ch_T0000218;transcript_name=hg002_chrY_paternal_145.1;gene_name=LOC105379264;ID=intron:HG03009_ch_T0000218:1;Name=LOC105379264;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8838628	8838703	.	+	.	source_transcript=hg002_chrY_paternal_145.1;source_transcript_name=hg002_chrY_paternal_145.1;source_gene=hg002_chrY_paternal_145;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_145;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_145.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_145.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379264;alternative_source_transcripts=hg002_chrY_paternal_145.1,hg002_chrY_paternal_145.1;transcript_id=HG03009_ch_T0000218;gene_id=HG03009_ch_G0000072;Parent=HG03009_ch_T0000218;transcript_name=hg002_chrY_paternal_145.1;gene_name=LOC105379264;ID=exon:HG03009_ch_T0000218:2;Name=LOC105379264;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8838704	8841012	.	+	.	source_transcript=hg002_chrY_paternal_145.1;source_transcript_name=hg002_chrY_paternal_145.1;source_gene=hg002_chrY_paternal_145;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_145;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_145.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_145.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379264;alternative_source_transcripts=hg002_chrY_paternal_145.1,hg002_chrY_paternal_145.1;transcript_id=HG03009_ch_T0000218;gene_id=HG03009_ch_G0000072;Parent=HG03009_ch_T0000218;transcript_name=hg002_chrY_paternal_145.1;gene_name=LOC105379264;ID=intron:HG03009_ch_T0000218:2;Name=LOC105379264;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8841013	8841096	.	+	.	source_transcript=hg002_chrY_paternal_145.1;source_transcript_name=hg002_chrY_paternal_145.1;source_gene=hg002_chrY_paternal_145;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_145;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_145.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_145.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379264;alternative_source_transcripts=hg002_chrY_paternal_145.1,hg002_chrY_paternal_145.1;transcript_id=HG03009_ch_T0000218;gene_id=HG03009_ch_G0000072;Parent=HG03009_ch_T0000218;transcript_name=hg002_chrY_paternal_145.1;gene_name=LOC105379264;ID=exon:HG03009_ch_T0000218:3;Name=LOC105379264;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	8845785	8854331	.	+	.	source_gene_common_name=LOC105379265;source_gene=hg002_chrY_paternal_146;alternative_source_transcripts=hg002_chrY_paternal_146.1,hg002_chrY_paternal_146.1;gene_id=HG03009_ch_G0000073;gene_biotype=lncRNA;gene_name=LOC105379265;gene_sources=liftoff;ID=HG03009_ch_G0000073;Name=LOC105379265
HG03009_chrY	CAT	transcript	8845785	8854331	1000	+	.	source_transcript=hg002_chrY_paternal_146.1;source_transcript_name=hg002_chrY_paternal_146.1;source_gene=hg002_chrY_paternal_146;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_146;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_146.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_146.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379265;alternative_source_transcripts=hg002_chrY_paternal_146.1,hg002_chrY_paternal_146.1;transcript_id=HG03009_ch_T0000219;gene_id=HG03009_ch_G0000073;Parent=HG03009_ch_G0000073;transcript_name=hg002_chrY_paternal_146.1;gene_name=LOC105379265;ID=HG03009_ch_T0000219;Name=LOC105379265
HG03009_chrY	CAT	exon	8845785	8846340	.	+	.	source_transcript=hg002_chrY_paternal_146.1;source_transcript_name=hg002_chrY_paternal_146.1;source_gene=hg002_chrY_paternal_146;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_146;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_146.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_146.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379265;alternative_source_transcripts=hg002_chrY_paternal_146.1,hg002_chrY_paternal_146.1;transcript_id=HG03009_ch_T0000219;gene_id=HG03009_ch_G0000073;Parent=HG03009_ch_T0000219;transcript_name=hg002_chrY_paternal_146.1;gene_name=LOC105379265;ID=exon:HG03009_ch_T0000219:0;Name=LOC105379265;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8846341	8847448	.	+	.	source_transcript=hg002_chrY_paternal_146.1;source_transcript_name=hg002_chrY_paternal_146.1;source_gene=hg002_chrY_paternal_146;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_146;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_146.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_146.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379265;alternative_source_transcripts=hg002_chrY_paternal_146.1,hg002_chrY_paternal_146.1;transcript_id=HG03009_ch_T0000219;gene_id=HG03009_ch_G0000073;Parent=HG03009_ch_T0000219;transcript_name=hg002_chrY_paternal_146.1;gene_name=LOC105379265;ID=intron:HG03009_ch_T0000219:0;Name=LOC105379265;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8847449	8847590	.	+	.	source_transcript=hg002_chrY_paternal_146.1;source_transcript_name=hg002_chrY_paternal_146.1;source_gene=hg002_chrY_paternal_146;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_146;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_146.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_146.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379265;alternative_source_transcripts=hg002_chrY_paternal_146.1,hg002_chrY_paternal_146.1;transcript_id=HG03009_ch_T0000219;gene_id=HG03009_ch_G0000073;Parent=HG03009_ch_T0000219;transcript_name=hg002_chrY_paternal_146.1;gene_name=LOC105379265;ID=exon:HG03009_ch_T0000219:1;Name=LOC105379265;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8847591	8849734	.	+	.	source_transcript=hg002_chrY_paternal_146.1;source_transcript_name=hg002_chrY_paternal_146.1;source_gene=hg002_chrY_paternal_146;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_146;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_146.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_146.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379265;alternative_source_transcripts=hg002_chrY_paternal_146.1,hg002_chrY_paternal_146.1;transcript_id=HG03009_ch_T0000219;gene_id=HG03009_ch_G0000073;Parent=HG03009_ch_T0000219;transcript_name=hg002_chrY_paternal_146.1;gene_name=LOC105379265;ID=intron:HG03009_ch_T0000219:1;Name=LOC105379265;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8849735	8849821	.	+	.	source_transcript=hg002_chrY_paternal_146.1;source_transcript_name=hg002_chrY_paternal_146.1;source_gene=hg002_chrY_paternal_146;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_146;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_146.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_146.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379265;alternative_source_transcripts=hg002_chrY_paternal_146.1,hg002_chrY_paternal_146.1;transcript_id=HG03009_ch_T0000219;gene_id=HG03009_ch_G0000073;Parent=HG03009_ch_T0000219;transcript_name=hg002_chrY_paternal_146.1;gene_name=LOC105379265;ID=exon:HG03009_ch_T0000219:2;Name=LOC105379265;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8849822	8854202	.	+	.	source_transcript=hg002_chrY_paternal_146.1;source_transcript_name=hg002_chrY_paternal_146.1;source_gene=hg002_chrY_paternal_146;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_146;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_146.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_146.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379265;alternative_source_transcripts=hg002_chrY_paternal_146.1,hg002_chrY_paternal_146.1;transcript_id=HG03009_ch_T0000219;gene_id=HG03009_ch_G0000073;Parent=HG03009_ch_T0000219;transcript_name=hg002_chrY_paternal_146.1;gene_name=LOC105379265;ID=intron:HG03009_ch_T0000219:2;Name=LOC105379265;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8854203	8854331	.	+	.	source_transcript=hg002_chrY_paternal_146.1;source_transcript_name=hg002_chrY_paternal_146.1;source_gene=hg002_chrY_paternal_146;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_146;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_146.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_146.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379265;alternative_source_transcripts=hg002_chrY_paternal_146.1,hg002_chrY_paternal_146.1;transcript_id=HG03009_ch_T0000219;gene_id=HG03009_ch_G0000073;Parent=HG03009_ch_T0000219;transcript_name=hg002_chrY_paternal_146.1;gene_name=LOC105379265;ID=exon:HG03009_ch_T0000219:3;Name=LOC105379265;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	8860365	8862616	.	+	.	source_gene_common_name=LOC105379266;source_gene=hg002_chrY_paternal_147;alternative_source_transcripts=hg002_chrY_paternal_147.1;gene_id=HG03009_ch_G0000074;gene_biotype=lncRNA;gene_name=LOC105379266;gene_sources=liftoff,transMap;ID=HG03009_ch_G0000074;Name=LOC105379266
HG03009_chrY	CAT	transcript	8860365	8862616	1000	+	.	source_transcript=hg002_chrY_paternal_147.1;source_transcript_name=hg002_chrY_paternal_147.1;source_gene=hg002_chrY_paternal_147;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_147;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_147.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_147.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379266;alternative_source_transcripts=hg002_chrY_paternal_147.1;AdditionalSources=liftoff;transcript_id=HG03009_ch_T0000220;gene_id=HG03009_ch_G0000074;Parent=HG03009_ch_G0000074;transcript_name=hg002_chrY_paternal_147.1;gene_name=LOC105379266;ID=HG03009_ch_T0000220;Name=LOC105379266
HG03009_chrY	CAT	exon	8860365	8860649	.	+	.	source_transcript=hg002_chrY_paternal_147.1;source_transcript_name=hg002_chrY_paternal_147.1;source_gene=hg002_chrY_paternal_147;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_147;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_147.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_147.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379266;alternative_source_transcripts=hg002_chrY_paternal_147.1;AdditionalSources=liftoff;transcript_id=HG03009_ch_T0000220;gene_id=HG03009_ch_G0000074;Parent=HG03009_ch_T0000220;transcript_name=hg002_chrY_paternal_147.1;gene_name=LOC105379266;ID=exon:HG03009_ch_T0000220:0;Name=LOC105379266;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8860650	8861334	.	+	.	source_transcript=hg002_chrY_paternal_147.1;source_transcript_name=hg002_chrY_paternal_147.1;source_gene=hg002_chrY_paternal_147;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_147;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_147.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_147.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379266;alternative_source_transcripts=hg002_chrY_paternal_147.1;AdditionalSources=liftoff;transcript_id=HG03009_ch_T0000220;gene_id=HG03009_ch_G0000074;Parent=HG03009_ch_T0000220;transcript_name=hg002_chrY_paternal_147.1;gene_name=LOC105379266;ID=intron:HG03009_ch_T0000220:0;Name=LOC105379266;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8861335	8862616	.	+	.	source_transcript=hg002_chrY_paternal_147.1;source_transcript_name=hg002_chrY_paternal_147.1;source_gene=hg002_chrY_paternal_147;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_147;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_147.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_147.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379266;alternative_source_transcripts=hg002_chrY_paternal_147.1;AdditionalSources=liftoff;transcript_id=HG03009_ch_T0000220;gene_id=HG03009_ch_G0000074;Parent=HG03009_ch_T0000220;transcript_name=hg002_chrY_paternal_147.1;gene_name=LOC105379266;ID=exon:HG03009_ch_T0000220:1;Name=LOC105379266;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	8863772	8876000	.	+	.	source_gene_common_name=LOC105379267;source_gene=hg002_chrY_paternal_148;alternative_source_transcripts=hg002_chrY_paternal_148.1,hg002_chrY_paternal_148.1;gene_id=HG03009_ch_G0000075;gene_biotype=lncRNA;gene_name=LOC105379267;gene_sources=liftoff;ID=HG03009_ch_G0000075;Name=LOC105379267
HG03009_chrY	CAT	transcript	8863772	8876000	1000	+	.	source_transcript=hg002_chrY_paternal_148.1;source_transcript_name=hg002_chrY_paternal_148.1;source_gene=hg002_chrY_paternal_148;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_148;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_148.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_148.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379267;alternative_source_transcripts=hg002_chrY_paternal_148.1,hg002_chrY_paternal_148.1;transcript_id=HG03009_ch_T0000221;gene_id=HG03009_ch_G0000075;Parent=HG03009_ch_G0000075;transcript_name=hg002_chrY_paternal_148.1;gene_name=LOC105379267;ID=HG03009_ch_T0000221;Name=LOC105379267
HG03009_chrY	CAT	exon	8863772	8863943	.	+	.	source_transcript=hg002_chrY_paternal_148.1;source_transcript_name=hg002_chrY_paternal_148.1;source_gene=hg002_chrY_paternal_148;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_148;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_148.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_148.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379267;alternative_source_transcripts=hg002_chrY_paternal_148.1,hg002_chrY_paternal_148.1;transcript_id=HG03009_ch_T0000221;gene_id=HG03009_ch_G0000075;Parent=HG03009_ch_T0000221;transcript_name=hg002_chrY_paternal_148.1;gene_name=LOC105379267;ID=exon:HG03009_ch_T0000221:0;Name=LOC105379267;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8863944	8865188	.	+	.	source_transcript=hg002_chrY_paternal_148.1;source_transcript_name=hg002_chrY_paternal_148.1;source_gene=hg002_chrY_paternal_148;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_148;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_148.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_148.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379267;alternative_source_transcripts=hg002_chrY_paternal_148.1,hg002_chrY_paternal_148.1;transcript_id=HG03009_ch_T0000221;gene_id=HG03009_ch_G0000075;Parent=HG03009_ch_T0000221;transcript_name=hg002_chrY_paternal_148.1;gene_name=LOC105379267;ID=intron:HG03009_ch_T0000221:0;Name=LOC105379267;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8865189	8865263	.	+	.	source_transcript=hg002_chrY_paternal_148.1;source_transcript_name=hg002_chrY_paternal_148.1;source_gene=hg002_chrY_paternal_148;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_148;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_148.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_148.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379267;alternative_source_transcripts=hg002_chrY_paternal_148.1,hg002_chrY_paternal_148.1;transcript_id=HG03009_ch_T0000221;gene_id=HG03009_ch_G0000075;Parent=HG03009_ch_T0000221;transcript_name=hg002_chrY_paternal_148.1;gene_name=LOC105379267;ID=exon:HG03009_ch_T0000221:1;Name=LOC105379267;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8865264	8875929	.	+	.	source_transcript=hg002_chrY_paternal_148.1;source_transcript_name=hg002_chrY_paternal_148.1;source_gene=hg002_chrY_paternal_148;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_148;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_148.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_148.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379267;alternative_source_transcripts=hg002_chrY_paternal_148.1,hg002_chrY_paternal_148.1;transcript_id=HG03009_ch_T0000221;gene_id=HG03009_ch_G0000075;Parent=HG03009_ch_T0000221;transcript_name=hg002_chrY_paternal_148.1;gene_name=LOC105379267;ID=intron:HG03009_ch_T0000221:1;Name=LOC105379267;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8875930	8876000	.	+	.	source_transcript=hg002_chrY_paternal_148.1;source_transcript_name=hg002_chrY_paternal_148.1;source_gene=hg002_chrY_paternal_148;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_148;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_148.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_148.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379267;alternative_source_transcripts=hg002_chrY_paternal_148.1,hg002_chrY_paternal_148.1;transcript_id=HG03009_ch_T0000221;gene_id=HG03009_ch_G0000075;Parent=HG03009_ch_T0000221;transcript_name=hg002_chrY_paternal_148.1;gene_name=LOC105379267;ID=exon:HG03009_ch_T0000221:2;Name=LOC105379267;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	8888448	8894261	.	-	.	source_gene_common_name=RBMY1A3P;source_gene=hg002_chrY_paternal_149;alternative_source_transcripts=hg002_chrY_paternal_149.1,hg002_chrY_paternal_149.1;gene_id=HG03009_ch_G0000076;gene_biotype=transcribed_pseudogene;gene_name=RBMY1A3P;gene_sources=liftoff;ID=HG03009_ch_G0000076;Name=RBMY1A3P
HG03009_chrY	CAT	transcript	8888448	8894261	1000	-	.	source_transcript=hg002_chrY_paternal_149.1;source_transcript_name=hg002_chrY_paternal_149.1;source_gene=hg002_chrY_paternal_149;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_149;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_149.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_149.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;alternative_source_transcripts=hg002_chrY_paternal_149.1,hg002_chrY_paternal_149.1;transcript_id=HG03009_ch_T0000222;gene_id=HG03009_ch_G0000076;Parent=HG03009_ch_G0000076;transcript_name=hg002_chrY_paternal_149.1;gene_name=RBMY1A3P;ID=HG03009_ch_T0000222;Name=RBMY1A3P
HG03009_chrY	CAT	exon	8888448	8888478	.	-	.	source_transcript=hg002_chrY_paternal_149.1;source_transcript_name=hg002_chrY_paternal_149.1;source_gene=hg002_chrY_paternal_149;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_149;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_149.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_149.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;alternative_source_transcripts=hg002_chrY_paternal_149.1,hg002_chrY_paternal_149.1;transcript_id=HG03009_ch_T0000222;gene_id=HG03009_ch_G0000076;Parent=HG03009_ch_T0000222;transcript_name=hg002_chrY_paternal_149.1;gene_name=RBMY1A3P;ID=exon:HG03009_ch_T0000222:0;Name=RBMY1A3P;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8888479	8890378	.	-	.	source_transcript=hg002_chrY_paternal_149.1;source_transcript_name=hg002_chrY_paternal_149.1;source_gene=hg002_chrY_paternal_149;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_149;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_149.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_149.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;alternative_source_transcripts=hg002_chrY_paternal_149.1,hg002_chrY_paternal_149.1;transcript_id=HG03009_ch_T0000222;gene_id=HG03009_ch_G0000076;Parent=HG03009_ch_T0000222;transcript_name=hg002_chrY_paternal_149.1;gene_name=RBMY1A3P;ID=intron:HG03009_ch_T0000222:0;Name=RBMY1A3P;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8890379	8890556	.	-	.	source_transcript=hg002_chrY_paternal_149.1;source_transcript_name=hg002_chrY_paternal_149.1;source_gene=hg002_chrY_paternal_149;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_149;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_149.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_149.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;alternative_source_transcripts=hg002_chrY_paternal_149.1,hg002_chrY_paternal_149.1;transcript_id=HG03009_ch_T0000222;gene_id=HG03009_ch_G0000076;Parent=HG03009_ch_T0000222;transcript_name=hg002_chrY_paternal_149.1;gene_name=RBMY1A3P;ID=exon:HG03009_ch_T0000222:1;Name=RBMY1A3P;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8890557	8893571	.	-	.	source_transcript=hg002_chrY_paternal_149.1;source_transcript_name=hg002_chrY_paternal_149.1;source_gene=hg002_chrY_paternal_149;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_149;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_149.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_149.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;alternative_source_transcripts=hg002_chrY_paternal_149.1,hg002_chrY_paternal_149.1;transcript_id=HG03009_ch_T0000222;gene_id=HG03009_ch_G0000076;Parent=HG03009_ch_T0000222;transcript_name=hg002_chrY_paternal_149.1;gene_name=RBMY1A3P;ID=intron:HG03009_ch_T0000222:1;Name=RBMY1A3P;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8893572	8893675	.	-	.	source_transcript=hg002_chrY_paternal_149.1;source_transcript_name=hg002_chrY_paternal_149.1;source_gene=hg002_chrY_paternal_149;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_149;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_149.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_149.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;alternative_source_transcripts=hg002_chrY_paternal_149.1,hg002_chrY_paternal_149.1;transcript_id=HG03009_ch_T0000222;gene_id=HG03009_ch_G0000076;Parent=HG03009_ch_T0000222;transcript_name=hg002_chrY_paternal_149.1;gene_name=RBMY1A3P;ID=exon:HG03009_ch_T0000222:2;Name=RBMY1A3P;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8893676	8894147	.	-	.	source_transcript=hg002_chrY_paternal_149.1;source_transcript_name=hg002_chrY_paternal_149.1;source_gene=hg002_chrY_paternal_149;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_149;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_149.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_149.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;alternative_source_transcripts=hg002_chrY_paternal_149.1,hg002_chrY_paternal_149.1;transcript_id=HG03009_ch_T0000222;gene_id=HG03009_ch_G0000076;Parent=HG03009_ch_T0000222;transcript_name=hg002_chrY_paternal_149.1;gene_name=RBMY1A3P;ID=intron:HG03009_ch_T0000222:2;Name=RBMY1A3P;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8894148	8894261	.	-	.	source_transcript=hg002_chrY_paternal_149.1;source_transcript_name=hg002_chrY_paternal_149.1;source_gene=hg002_chrY_paternal_149;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_149;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_149.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_149.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;alternative_source_transcripts=hg002_chrY_paternal_149.1,hg002_chrY_paternal_149.1;transcript_id=HG03009_ch_T0000222;gene_id=HG03009_ch_G0000076;Parent=HG03009_ch_T0000222;transcript_name=hg002_chrY_paternal_149.1;gene_name=RBMY1A3P;ID=exon:HG03009_ch_T0000222:3;Name=RBMY1A3P;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	8901267	8906219	.	-	.	source_gene_common_name=TTTY20;source_gene=hg002_chrY_paternal_151;alternative_source_transcripts=hg002_chrY_paternal_151.1,hg002_chrY_paternal_151.1;gene_id=HG03009_ch_G0000077;gene_biotype=lncRNA;gene_name=TTTY20;gene_sources=liftoff;ID=HG03009_ch_G0000077;Name=TTTY20
HG03009_chrY	CAT	transcript	8901267	8906219	1000	-	.	source_transcript=hg002_chrY_paternal_151.1;source_transcript_name=hg002_chrY_paternal_151.1;source_gene=hg002_chrY_paternal_151;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_151;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_151.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_151.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY20;alternative_source_transcripts=hg002_chrY_paternal_151.1,hg002_chrY_paternal_151.1;transcript_id=HG03009_ch_T0000223;gene_id=HG03009_ch_G0000077;Parent=HG03009_ch_G0000077;transcript_name=hg002_chrY_paternal_151.1;gene_name=TTTY20;ID=HG03009_ch_T0000223;Name=TTTY20
HG03009_chrY	CAT	exon	8901267	8901443	.	-	.	source_transcript=hg002_chrY_paternal_151.1;source_transcript_name=hg002_chrY_paternal_151.1;source_gene=hg002_chrY_paternal_151;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_151;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_151.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_151.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY20;alternative_source_transcripts=hg002_chrY_paternal_151.1,hg002_chrY_paternal_151.1;transcript_id=HG03009_ch_T0000223;gene_id=HG03009_ch_G0000077;Parent=HG03009_ch_T0000223;transcript_name=hg002_chrY_paternal_151.1;gene_name=TTTY20;ID=exon:HG03009_ch_T0000223:0;Name=TTTY20;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8901444	8906137	.	-	.	source_transcript=hg002_chrY_paternal_151.1;source_transcript_name=hg002_chrY_paternal_151.1;source_gene=hg002_chrY_paternal_151;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_151;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_151.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_151.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY20;alternative_source_transcripts=hg002_chrY_paternal_151.1,hg002_chrY_paternal_151.1;transcript_id=HG03009_ch_T0000223;gene_id=HG03009_ch_G0000077;Parent=HG03009_ch_T0000223;transcript_name=hg002_chrY_paternal_151.1;gene_name=TTTY20;ID=intron:HG03009_ch_T0000223:0;Name=TTTY20;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8906138	8906219	.	-	.	source_transcript=hg002_chrY_paternal_151.1;source_transcript_name=hg002_chrY_paternal_151.1;source_gene=hg002_chrY_paternal_151;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_151;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_151.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_151.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY20;alternative_source_transcripts=hg002_chrY_paternal_151.1,hg002_chrY_paternal_151.1;transcript_id=HG03009_ch_T0000223;gene_id=HG03009_ch_G0000077;Parent=HG03009_ch_T0000223;transcript_name=hg002_chrY_paternal_151.1;gene_name=TTTY20;ID=exon:HG03009_ch_T0000223:1;Name=TTTY20;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	8908852	8911648	.	+	.	source_gene_common_name=TSPY8;source_gene=hg002_chrY_paternal_152;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;gene_id=HG03009_ch_G0000078;gene_biotype=protein_coding;gene_name=TSPY8;gene_sources=liftoff,augTM;ID=HG03009_ch_G0000078;Name=TSPY8
HG03009_chrY	CAT	transcript	8908852	8911648	100	+	.	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000224;gene_id=HG03009_ch_G0000078;Parent=HG03009_ch_G0000078;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=HG03009_ch_T0000224;Name=TSPY8
HG03009_chrY	CAT	exon	8908852	8909383	.	+	.	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000224;gene_id=HG03009_ch_G0000078;Parent=HG03009_ch_T0000224;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG03009_ch_T0000224:0;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	8908898	8909383	.	+	0	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000224;gene_id=HG03009_ch_G0000078;Parent=HG03009_ch_T0000224;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=CDS:HG03009_ch_T0000224:0;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	8908898	8908900	.	+	0	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000224;gene_id=HG03009_ch_G0000078;Parent=HG03009_ch_T0000224;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=start_codon:HG03009_ch_T0000224;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8909384	8909990	.	+	.	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000224;gene_id=HG03009_ch_G0000078;Parent=HG03009_ch_T0000224;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=intron:HG03009_ch_T0000224:0;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8909991	8910068	.	+	.	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000224;gene_id=HG03009_ch_G0000078;Parent=HG03009_ch_T0000224;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG03009_ch_T0000224:1;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	8909991	8910068	.	+	0	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000224;gene_id=HG03009_ch_G0000078;Parent=HG03009_ch_T0000224;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=CDS:HG03009_ch_T0000224:1;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8910069	8910196	.	+	.	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000224;gene_id=HG03009_ch_G0000078;Parent=HG03009_ch_T0000224;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=intron:HG03009_ch_T0000224:1;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8910197	8910308	.	+	.	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000224;gene_id=HG03009_ch_G0000078;Parent=HG03009_ch_T0000224;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG03009_ch_T0000224:2;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	8910197	8910308	.	+	0	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000224;gene_id=HG03009_ch_G0000078;Parent=HG03009_ch_T0000224;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=CDS:HG03009_ch_T0000224:2;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8910309	8910409	.	+	.	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000224;gene_id=HG03009_ch_G0000078;Parent=HG03009_ch_T0000224;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=intron:HG03009_ch_T0000224:2;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8910410	8910555	.	+	.	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000224;gene_id=HG03009_ch_G0000078;Parent=HG03009_ch_T0000224;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG03009_ch_T0000224:3;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	8910410	8910555	.	+	2	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000224;gene_id=HG03009_ch_G0000078;Parent=HG03009_ch_T0000224;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=CDS:HG03009_ch_T0000224:3;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8910556	8910661	.	+	.	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000224;gene_id=HG03009_ch_G0000078;Parent=HG03009_ch_T0000224;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=intron:HG03009_ch_T0000224:3;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8910662	8910743	.	+	.	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000224;gene_id=HG03009_ch_G0000078;Parent=HG03009_ch_T0000224;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG03009_ch_T0000224:4;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	8910662	8910743	.	+	0	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000224;gene_id=HG03009_ch_G0000078;Parent=HG03009_ch_T0000224;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=CDS:HG03009_ch_T0000224:4;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8910744	8911437	.	+	.	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000224;gene_id=HG03009_ch_G0000078;Parent=HG03009_ch_T0000224;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=intron:HG03009_ch_T0000224:4;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8911438	8911648	.	+	.	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000224;gene_id=HG03009_ch_G0000078;Parent=HG03009_ch_T0000224;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG03009_ch_T0000224:5;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	8911438	8911460	.	+	2	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000224;gene_id=HG03009_ch_G0000078;Parent=HG03009_ch_T0000224;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=CDS:HG03009_ch_T0000224:5;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	8911458	8911460	.	+	0	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000224;gene_id=HG03009_ch_G0000078;Parent=HG03009_ch_T0000224;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=stop_codon:HG03009_ch_T0000224;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	8908852	8911648	100	+	.	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000225;gene_id=HG03009_ch_G0000078;Parent=HG03009_ch_G0000078;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=HG03009_ch_T0000225;Name=TSPY8
HG03009_chrY	CAT	exon	8908852	8909383	.	+	.	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000225;gene_id=HG03009_ch_G0000078;Parent=HG03009_ch_T0000225;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG03009_ch_T0000225:0;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	8908898	8909383	.	+	0	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000225;gene_id=HG03009_ch_G0000078;Parent=HG03009_ch_T0000225;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=CDS:HG03009_ch_T0000225:0;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	8908898	8908900	.	+	0	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000225;gene_id=HG03009_ch_G0000078;Parent=HG03009_ch_T0000225;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=start_codon:HG03009_ch_T0000225;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8909384	8909990	.	+	.	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000225;gene_id=HG03009_ch_G0000078;Parent=HG03009_ch_T0000225;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=intron:HG03009_ch_T0000225:0;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8909991	8910068	.	+	.	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000225;gene_id=HG03009_ch_G0000078;Parent=HG03009_ch_T0000225;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG03009_ch_T0000225:1;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	8909991	8910068	.	+	0	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000225;gene_id=HG03009_ch_G0000078;Parent=HG03009_ch_T0000225;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=CDS:HG03009_ch_T0000225:1;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8910069	8910196	.	+	.	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000225;gene_id=HG03009_ch_G0000078;Parent=HG03009_ch_T0000225;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=intron:HG03009_ch_T0000225:1;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8910197	8910308	.	+	.	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000225;gene_id=HG03009_ch_G0000078;Parent=HG03009_ch_T0000225;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG03009_ch_T0000225:2;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	8910197	8910308	.	+	0	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000225;gene_id=HG03009_ch_G0000078;Parent=HG03009_ch_T0000225;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=CDS:HG03009_ch_T0000225:2;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8910309	8910409	.	+	.	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000225;gene_id=HG03009_ch_G0000078;Parent=HG03009_ch_T0000225;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=intron:HG03009_ch_T0000225:2;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8910410	8910555	.	+	.	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000225;gene_id=HG03009_ch_G0000078;Parent=HG03009_ch_T0000225;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG03009_ch_T0000225:3;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	8910410	8910555	.	+	2	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000225;gene_id=HG03009_ch_G0000078;Parent=HG03009_ch_T0000225;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=CDS:HG03009_ch_T0000225:3;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8910556	8910650	.	+	.	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000225;gene_id=HG03009_ch_G0000078;Parent=HG03009_ch_T0000225;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=intron:HG03009_ch_T0000225:3;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8910651	8910743	.	+	.	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000225;gene_id=HG03009_ch_G0000078;Parent=HG03009_ch_T0000225;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG03009_ch_T0000225:4;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	8910651	8910713	.	+	0	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000225;gene_id=HG03009_ch_G0000078;Parent=HG03009_ch_T0000225;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=CDS:HG03009_ch_T0000225:4;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	8910711	8910713	.	+	0	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000225;gene_id=HG03009_ch_G0000078;Parent=HG03009_ch_T0000225;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=stop_codon:HG03009_ch_T0000225;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8910744	8911437	.	+	.	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000225;gene_id=HG03009_ch_G0000078;Parent=HG03009_ch_T0000225;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=intron:HG03009_ch_T0000225:4;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8911438	8911648	.	+	.	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000225;gene_id=HG03009_ch_G0000078;Parent=HG03009_ch_T0000225;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG03009_ch_T0000225:5;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	8908852	8911648	100	+	.	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000226;gene_id=HG03009_ch_G0000078;Parent=HG03009_ch_G0000078;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=HG03009_ch_T0000226;Name=TSPY8
HG03009_chrY	CAT	exon	8908852	8909383	.	+	.	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000226;gene_id=HG03009_ch_G0000078;Parent=HG03009_ch_T0000226;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG03009_ch_T0000226:0;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	8908898	8909383	.	+	0	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000226;gene_id=HG03009_ch_G0000078;Parent=HG03009_ch_T0000226;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=CDS:HG03009_ch_T0000226:0;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	8908898	8908900	.	+	0	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000226;gene_id=HG03009_ch_G0000078;Parent=HG03009_ch_T0000226;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=start_codon:HG03009_ch_T0000226;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8909384	8909990	.	+	.	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000226;gene_id=HG03009_ch_G0000078;Parent=HG03009_ch_T0000226;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=intron:HG03009_ch_T0000226:0;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8909991	8910068	.	+	.	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000226;gene_id=HG03009_ch_G0000078;Parent=HG03009_ch_T0000226;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG03009_ch_T0000226:1;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	8909991	8910068	.	+	0	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000226;gene_id=HG03009_ch_G0000078;Parent=HG03009_ch_T0000226;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=CDS:HG03009_ch_T0000226:1;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8910069	8910196	.	+	.	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000226;gene_id=HG03009_ch_G0000078;Parent=HG03009_ch_T0000226;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=intron:HG03009_ch_T0000226:1;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8910197	8910308	.	+	.	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000226;gene_id=HG03009_ch_G0000078;Parent=HG03009_ch_T0000226;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG03009_ch_T0000226:2;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	8910197	8910308	.	+	0	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000226;gene_id=HG03009_ch_G0000078;Parent=HG03009_ch_T0000226;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=CDS:HG03009_ch_T0000226:2;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8910309	8910416	.	+	.	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000226;gene_id=HG03009_ch_G0000078;Parent=HG03009_ch_T0000226;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=intron:HG03009_ch_T0000226:2;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8910417	8910555	.	+	.	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000226;gene_id=HG03009_ch_G0000078;Parent=HG03009_ch_T0000226;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG03009_ch_T0000226:3;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	8910417	8910555	.	+	2	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000226;gene_id=HG03009_ch_G0000078;Parent=HG03009_ch_T0000226;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=CDS:HG03009_ch_T0000226:3;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8910556	8910661	.	+	.	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000226;gene_id=HG03009_ch_G0000078;Parent=HG03009_ch_T0000226;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=intron:HG03009_ch_T0000226:3;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8910662	8910743	.	+	.	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000226;gene_id=HG03009_ch_G0000078;Parent=HG03009_ch_T0000226;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG03009_ch_T0000226:4;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	8910662	8910713	.	+	1	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000226;gene_id=HG03009_ch_G0000078;Parent=HG03009_ch_T0000226;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=CDS:HG03009_ch_T0000226:4;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	8910711	8910713	.	+	0	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000226;gene_id=HG03009_ch_G0000078;Parent=HG03009_ch_T0000226;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=stop_codon:HG03009_ch_T0000226;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8910744	8911437	.	+	.	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000226;gene_id=HG03009_ch_G0000078;Parent=HG03009_ch_T0000226;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=intron:HG03009_ch_T0000226:4;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8911438	8911648	.	+	.	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000226;gene_id=HG03009_ch_G0000078;Parent=HG03009_ch_T0000226;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG03009_ch_T0000226:5;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	8908852	8911648	1000	+	.	source_transcript=hg002_chrY_paternal_152.4;source_transcript_name=hg002_chrY_paternal_152.1;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_152.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.4,hg002_chrY_paternal_152.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000227;gene_id=HG03009_ch_G0000078;Parent=HG03009_ch_G0000078;transcript_name=hg002_chrY_paternal_152.1;gene_name=TSPY8;ID=HG03009_ch_T0000227;Name=TSPY8
HG03009_chrY	CAT	exon	8908852	8909383	.	+	.	source_transcript=hg002_chrY_paternal_152.4;source_transcript_name=hg002_chrY_paternal_152.1;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_152.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.4,hg002_chrY_paternal_152.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000227;gene_id=HG03009_ch_G0000078;Parent=HG03009_ch_T0000227;transcript_name=hg002_chrY_paternal_152.1;gene_name=TSPY8;ID=exon:HG03009_ch_T0000227:0;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8909384	8909990	.	+	.	source_transcript=hg002_chrY_paternal_152.4;source_transcript_name=hg002_chrY_paternal_152.1;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_152.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.4,hg002_chrY_paternal_152.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000227;gene_id=HG03009_ch_G0000078;Parent=HG03009_ch_T0000227;transcript_name=hg002_chrY_paternal_152.1;gene_name=TSPY8;ID=intron:HG03009_ch_T0000227:0;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8909991	8910068	.	+	.	source_transcript=hg002_chrY_paternal_152.4;source_transcript_name=hg002_chrY_paternal_152.1;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_152.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.4,hg002_chrY_paternal_152.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000227;gene_id=HG03009_ch_G0000078;Parent=HG03009_ch_T0000227;transcript_name=hg002_chrY_paternal_152.1;gene_name=TSPY8;ID=exon:HG03009_ch_T0000227:1;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8910069	8910196	.	+	.	source_transcript=hg002_chrY_paternal_152.4;source_transcript_name=hg002_chrY_paternal_152.1;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_152.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.4,hg002_chrY_paternal_152.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000227;gene_id=HG03009_ch_G0000078;Parent=HG03009_ch_T0000227;transcript_name=hg002_chrY_paternal_152.1;gene_name=TSPY8;ID=intron:HG03009_ch_T0000227:1;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8910197	8910308	.	+	.	source_transcript=hg002_chrY_paternal_152.4;source_transcript_name=hg002_chrY_paternal_152.1;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_152.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.4,hg002_chrY_paternal_152.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000227;gene_id=HG03009_ch_G0000078;Parent=HG03009_ch_T0000227;transcript_name=hg002_chrY_paternal_152.1;gene_name=TSPY8;ID=exon:HG03009_ch_T0000227:2;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8910309	8910416	.	+	.	source_transcript=hg002_chrY_paternal_152.4;source_transcript_name=hg002_chrY_paternal_152.1;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_152.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.4,hg002_chrY_paternal_152.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000227;gene_id=HG03009_ch_G0000078;Parent=HG03009_ch_T0000227;transcript_name=hg002_chrY_paternal_152.1;gene_name=TSPY8;ID=intron:HG03009_ch_T0000227:2;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8910417	8910555	.	+	.	source_transcript=hg002_chrY_paternal_152.4;source_transcript_name=hg002_chrY_paternal_152.1;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_152.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.4,hg002_chrY_paternal_152.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000227;gene_id=HG03009_ch_G0000078;Parent=HG03009_ch_T0000227;transcript_name=hg002_chrY_paternal_152.1;gene_name=TSPY8;ID=exon:HG03009_ch_T0000227:3;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8910556	8910650	.	+	.	source_transcript=hg002_chrY_paternal_152.4;source_transcript_name=hg002_chrY_paternal_152.1;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_152.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.4,hg002_chrY_paternal_152.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000227;gene_id=HG03009_ch_G0000078;Parent=HG03009_ch_T0000227;transcript_name=hg002_chrY_paternal_152.1;gene_name=TSPY8;ID=intron:HG03009_ch_T0000227:3;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8910651	8910743	.	+	.	source_transcript=hg002_chrY_paternal_152.4;source_transcript_name=hg002_chrY_paternal_152.1;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_152.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.4,hg002_chrY_paternal_152.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000227;gene_id=HG03009_ch_G0000078;Parent=HG03009_ch_T0000227;transcript_name=hg002_chrY_paternal_152.1;gene_name=TSPY8;ID=exon:HG03009_ch_T0000227:4;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8910744	8911437	.	+	.	source_transcript=hg002_chrY_paternal_152.4;source_transcript_name=hg002_chrY_paternal_152.1;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_152.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.4,hg002_chrY_paternal_152.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000227;gene_id=HG03009_ch_G0000078;Parent=HG03009_ch_T0000227;transcript_name=hg002_chrY_paternal_152.1;gene_name=TSPY8;ID=intron:HG03009_ch_T0000227:4;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8911438	8911648	.	+	.	source_transcript=hg002_chrY_paternal_152.4;source_transcript_name=hg002_chrY_paternal_152.1;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_152.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.4,hg002_chrY_paternal_152.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000227;gene_id=HG03009_ch_G0000078;Parent=HG03009_ch_T0000227;transcript_name=hg002_chrY_paternal_152.1;gene_name=TSPY8;ID=exon:HG03009_ch_T0000227:5;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	8920937	8926547	.	-	.	source_gene_common_name=FAM197Y3;source_gene=hg002_chrY_paternal_153;alternative_source_transcripts=hg002_chrY_paternal_153.1,hg002_chrY_paternal_153.1;gene_id=HG03009_ch_G0000079;gene_biotype=lncRNA;gene_name=FAM197Y3;gene_sources=liftoff;ID=HG03009_ch_G0000079;Name=FAM197Y3
HG03009_chrY	CAT	transcript	8920937	8926547	1000	-	.	source_transcript=hg002_chrY_paternal_153.1;source_transcript_name=hg002_chrY_paternal_153.1;source_gene=hg002_chrY_paternal_153;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_153;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_153.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_153.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_153.1,hg002_chrY_paternal_153.1;transcript_id=HG03009_ch_T0000228;gene_id=HG03009_ch_G0000079;Parent=HG03009_ch_G0000079;transcript_name=hg002_chrY_paternal_153.1;gene_name=FAM197Y3;ID=HG03009_ch_T0000228;Name=FAM197Y3
HG03009_chrY	CAT	exon	8920937	8920996	.	-	.	source_transcript=hg002_chrY_paternal_153.1;source_transcript_name=hg002_chrY_paternal_153.1;source_gene=hg002_chrY_paternal_153;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_153;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_153.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_153.1,hg002_chrY_paternal_153.1;transcript_id=HG03009_ch_T0000228;gene_id=HG03009_ch_G0000079;Parent=HG03009_ch_T0000228;transcript_name=hg002_chrY_paternal_153.1;gene_name=FAM197Y3;ID=exon:HG03009_ch_T0000228:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8920997	8924546	.	-	.	source_transcript=hg002_chrY_paternal_153.1;source_transcript_name=hg002_chrY_paternal_153.1;source_gene=hg002_chrY_paternal_153;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_153;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_153.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_153.1,hg002_chrY_paternal_153.1;transcript_id=HG03009_ch_T0000228;gene_id=HG03009_ch_G0000079;Parent=HG03009_ch_T0000228;transcript_name=hg002_chrY_paternal_153.1;gene_name=FAM197Y3;ID=intron:HG03009_ch_T0000228:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8924547	8924705	.	-	.	source_transcript=hg002_chrY_paternal_153.1;source_transcript_name=hg002_chrY_paternal_153.1;source_gene=hg002_chrY_paternal_153;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_153;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_153.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_153.1,hg002_chrY_paternal_153.1;transcript_id=HG03009_ch_T0000228;gene_id=HG03009_ch_G0000079;Parent=HG03009_ch_T0000228;transcript_name=hg002_chrY_paternal_153.1;gene_name=FAM197Y3;ID=exon:HG03009_ch_T0000228:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8924706	8926213	.	-	.	source_transcript=hg002_chrY_paternal_153.1;source_transcript_name=hg002_chrY_paternal_153.1;source_gene=hg002_chrY_paternal_153;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_153;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_153.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_153.1,hg002_chrY_paternal_153.1;transcript_id=HG03009_ch_T0000228;gene_id=HG03009_ch_G0000079;Parent=HG03009_ch_T0000228;transcript_name=hg002_chrY_paternal_153.1;gene_name=FAM197Y3;ID=intron:HG03009_ch_T0000228:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8926214	8926359	.	-	.	source_transcript=hg002_chrY_paternal_153.1;source_transcript_name=hg002_chrY_paternal_153.1;source_gene=hg002_chrY_paternal_153;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_153;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_153.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_153.1,hg002_chrY_paternal_153.1;transcript_id=HG03009_ch_T0000228;gene_id=HG03009_ch_G0000079;Parent=HG03009_ch_T0000228;transcript_name=hg002_chrY_paternal_153.1;gene_name=FAM197Y3;ID=exon:HG03009_ch_T0000228:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8926360	8926445	.	-	.	source_transcript=hg002_chrY_paternal_153.1;source_transcript_name=hg002_chrY_paternal_153.1;source_gene=hg002_chrY_paternal_153;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_153;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_153.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_153.1,hg002_chrY_paternal_153.1;transcript_id=HG03009_ch_T0000228;gene_id=HG03009_ch_G0000079;Parent=HG03009_ch_T0000228;transcript_name=hg002_chrY_paternal_153.1;gene_name=FAM197Y3;ID=intron:HG03009_ch_T0000228:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8926446	8926547	.	-	.	source_transcript=hg002_chrY_paternal_153.1;source_transcript_name=hg002_chrY_paternal_153.1;source_gene=hg002_chrY_paternal_153;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_153;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_153.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_153.1,hg002_chrY_paternal_153.1;transcript_id=HG03009_ch_T0000228;gene_id=HG03009_ch_G0000079;Parent=HG03009_ch_T0000228;transcript_name=hg002_chrY_paternal_153.1;gene_name=FAM197Y3;ID=exon:HG03009_ch_T0000228:3;Name=FAM197Y3;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	8929162	8931958	.	+	.	source_gene_common_name=TSPY8;source_gene=hg002_chrY_paternal_154;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;gene_id=HG03009_ch_G0000080;gene_biotype=protein_coding;gene_name=TSPY8;gene_sources=liftoff,augTM;ID=HG03009_ch_G0000080;Name=TSPY8
HG03009_chrY	CAT	transcript	8929162	8931958	100	+	.	source_transcript=hg002_chrY_paternal_154.1;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000229;gene_id=HG03009_ch_G0000080;Parent=HG03009_ch_G0000080;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=HG03009_ch_T0000229;Name=TSPY8
HG03009_chrY	CAT	exon	8929162	8929693	.	+	.	source_transcript=hg002_chrY_paternal_154.1;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000229;gene_id=HG03009_ch_G0000080;Parent=HG03009_ch_T0000229;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=exon:HG03009_ch_T0000229:0;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	8929208	8929693	.	+	0	source_transcript=hg002_chrY_paternal_154.1;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000229;gene_id=HG03009_ch_G0000080;Parent=HG03009_ch_T0000229;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=CDS:HG03009_ch_T0000229:0;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	8929208	8929210	.	+	0	source_transcript=hg002_chrY_paternal_154.1;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000229;gene_id=HG03009_ch_G0000080;Parent=HG03009_ch_T0000229;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=start_codon:HG03009_ch_T0000229;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8929694	8930300	.	+	.	source_transcript=hg002_chrY_paternal_154.1;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000229;gene_id=HG03009_ch_G0000080;Parent=HG03009_ch_T0000229;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=intron:HG03009_ch_T0000229:0;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8930301	8930378	.	+	.	source_transcript=hg002_chrY_paternal_154.1;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000229;gene_id=HG03009_ch_G0000080;Parent=HG03009_ch_T0000229;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=exon:HG03009_ch_T0000229:1;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	8930301	8930378	.	+	0	source_transcript=hg002_chrY_paternal_154.1;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000229;gene_id=HG03009_ch_G0000080;Parent=HG03009_ch_T0000229;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=CDS:HG03009_ch_T0000229:1;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8930379	8930506	.	+	.	source_transcript=hg002_chrY_paternal_154.1;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000229;gene_id=HG03009_ch_G0000080;Parent=HG03009_ch_T0000229;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=intron:HG03009_ch_T0000229:1;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8930507	8930618	.	+	.	source_transcript=hg002_chrY_paternal_154.1;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000229;gene_id=HG03009_ch_G0000080;Parent=HG03009_ch_T0000229;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=exon:HG03009_ch_T0000229:2;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	8930507	8930618	.	+	0	source_transcript=hg002_chrY_paternal_154.1;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000229;gene_id=HG03009_ch_G0000080;Parent=HG03009_ch_T0000229;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=CDS:HG03009_ch_T0000229:2;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8930619	8930719	.	+	.	source_transcript=hg002_chrY_paternal_154.1;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000229;gene_id=HG03009_ch_G0000080;Parent=HG03009_ch_T0000229;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=intron:HG03009_ch_T0000229:2;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8930720	8930865	.	+	.	source_transcript=hg002_chrY_paternal_154.1;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000229;gene_id=HG03009_ch_G0000080;Parent=HG03009_ch_T0000229;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=exon:HG03009_ch_T0000229:3;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	8930720	8930865	.	+	2	source_transcript=hg002_chrY_paternal_154.1;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000229;gene_id=HG03009_ch_G0000080;Parent=HG03009_ch_T0000229;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=CDS:HG03009_ch_T0000229:3;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8930866	8930971	.	+	.	source_transcript=hg002_chrY_paternal_154.1;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000229;gene_id=HG03009_ch_G0000080;Parent=HG03009_ch_T0000229;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=intron:HG03009_ch_T0000229:3;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8930972	8931053	.	+	.	source_transcript=hg002_chrY_paternal_154.1;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000229;gene_id=HG03009_ch_G0000080;Parent=HG03009_ch_T0000229;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=exon:HG03009_ch_T0000229:4;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	8930972	8931053	.	+	0	source_transcript=hg002_chrY_paternal_154.1;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000229;gene_id=HG03009_ch_G0000080;Parent=HG03009_ch_T0000229;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=CDS:HG03009_ch_T0000229:4;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8931054	8931747	.	+	.	source_transcript=hg002_chrY_paternal_154.1;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000229;gene_id=HG03009_ch_G0000080;Parent=HG03009_ch_T0000229;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=intron:HG03009_ch_T0000229:4;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8931748	8931958	.	+	.	source_transcript=hg002_chrY_paternal_154.1;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000229;gene_id=HG03009_ch_G0000080;Parent=HG03009_ch_T0000229;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=exon:HG03009_ch_T0000229:5;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	8931748	8931770	.	+	2	source_transcript=hg002_chrY_paternal_154.1;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000229;gene_id=HG03009_ch_G0000080;Parent=HG03009_ch_T0000229;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=CDS:HG03009_ch_T0000229:5;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	8931768	8931770	.	+	0	source_transcript=hg002_chrY_paternal_154.1;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000229;gene_id=HG03009_ch_G0000080;Parent=HG03009_ch_T0000229;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=stop_codon:HG03009_ch_T0000229;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	8929162	8931958	100	+	.	source_transcript=hg002_chrY_paternal_154.2;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000230;gene_id=HG03009_ch_G0000080;Parent=HG03009_ch_G0000080;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=HG03009_ch_T0000230;Name=TSPY8
HG03009_chrY	CAT	exon	8929162	8929693	.	+	.	source_transcript=hg002_chrY_paternal_154.2;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000230;gene_id=HG03009_ch_G0000080;Parent=HG03009_ch_T0000230;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=exon:HG03009_ch_T0000230:0;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	8929208	8929693	.	+	0	source_transcript=hg002_chrY_paternal_154.2;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000230;gene_id=HG03009_ch_G0000080;Parent=HG03009_ch_T0000230;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=CDS:HG03009_ch_T0000230:0;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	8929208	8929210	.	+	0	source_transcript=hg002_chrY_paternal_154.2;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000230;gene_id=HG03009_ch_G0000080;Parent=HG03009_ch_T0000230;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=start_codon:HG03009_ch_T0000230;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8929694	8930300	.	+	.	source_transcript=hg002_chrY_paternal_154.2;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000230;gene_id=HG03009_ch_G0000080;Parent=HG03009_ch_T0000230;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=intron:HG03009_ch_T0000230:0;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8930301	8930378	.	+	.	source_transcript=hg002_chrY_paternal_154.2;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000230;gene_id=HG03009_ch_G0000080;Parent=HG03009_ch_T0000230;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=exon:HG03009_ch_T0000230:1;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	8930301	8930378	.	+	0	source_transcript=hg002_chrY_paternal_154.2;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000230;gene_id=HG03009_ch_G0000080;Parent=HG03009_ch_T0000230;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=CDS:HG03009_ch_T0000230:1;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8930379	8930506	.	+	.	source_transcript=hg002_chrY_paternal_154.2;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000230;gene_id=HG03009_ch_G0000080;Parent=HG03009_ch_T0000230;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=intron:HG03009_ch_T0000230:1;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8930507	8930618	.	+	.	source_transcript=hg002_chrY_paternal_154.2;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000230;gene_id=HG03009_ch_G0000080;Parent=HG03009_ch_T0000230;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=exon:HG03009_ch_T0000230:2;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	8930507	8930618	.	+	0	source_transcript=hg002_chrY_paternal_154.2;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000230;gene_id=HG03009_ch_G0000080;Parent=HG03009_ch_T0000230;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=CDS:HG03009_ch_T0000230:2;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8930619	8930719	.	+	.	source_transcript=hg002_chrY_paternal_154.2;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000230;gene_id=HG03009_ch_G0000080;Parent=HG03009_ch_T0000230;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=intron:HG03009_ch_T0000230:2;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8930720	8930865	.	+	.	source_transcript=hg002_chrY_paternal_154.2;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000230;gene_id=HG03009_ch_G0000080;Parent=HG03009_ch_T0000230;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=exon:HG03009_ch_T0000230:3;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	8930720	8930865	.	+	2	source_transcript=hg002_chrY_paternal_154.2;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000230;gene_id=HG03009_ch_G0000080;Parent=HG03009_ch_T0000230;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=CDS:HG03009_ch_T0000230:3;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8930866	8930960	.	+	.	source_transcript=hg002_chrY_paternal_154.2;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000230;gene_id=HG03009_ch_G0000080;Parent=HG03009_ch_T0000230;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=intron:HG03009_ch_T0000230:3;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8930961	8931053	.	+	.	source_transcript=hg002_chrY_paternal_154.2;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000230;gene_id=HG03009_ch_G0000080;Parent=HG03009_ch_T0000230;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=exon:HG03009_ch_T0000230:4;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	8930961	8931023	.	+	0	source_transcript=hg002_chrY_paternal_154.2;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000230;gene_id=HG03009_ch_G0000080;Parent=HG03009_ch_T0000230;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=CDS:HG03009_ch_T0000230:4;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	8931021	8931023	.	+	0	source_transcript=hg002_chrY_paternal_154.2;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000230;gene_id=HG03009_ch_G0000080;Parent=HG03009_ch_T0000230;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=stop_codon:HG03009_ch_T0000230;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8931054	8931747	.	+	.	source_transcript=hg002_chrY_paternal_154.2;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000230;gene_id=HG03009_ch_G0000080;Parent=HG03009_ch_T0000230;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=intron:HG03009_ch_T0000230:4;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8931748	8931958	.	+	.	source_transcript=hg002_chrY_paternal_154.2;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000230;gene_id=HG03009_ch_G0000080;Parent=HG03009_ch_T0000230;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=exon:HG03009_ch_T0000230:5;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	8929162	8931958	100	+	.	source_transcript=hg002_chrY_paternal_154.3;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000231;gene_id=HG03009_ch_G0000080;Parent=HG03009_ch_G0000080;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=HG03009_ch_T0000231;Name=TSPY8
HG03009_chrY	CAT	exon	8929162	8929693	.	+	.	source_transcript=hg002_chrY_paternal_154.3;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000231;gene_id=HG03009_ch_G0000080;Parent=HG03009_ch_T0000231;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=exon:HG03009_ch_T0000231:0;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	8929208	8929693	.	+	0	source_transcript=hg002_chrY_paternal_154.3;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000231;gene_id=HG03009_ch_G0000080;Parent=HG03009_ch_T0000231;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=CDS:HG03009_ch_T0000231:0;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	8929208	8929210	.	+	0	source_transcript=hg002_chrY_paternal_154.3;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000231;gene_id=HG03009_ch_G0000080;Parent=HG03009_ch_T0000231;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=start_codon:HG03009_ch_T0000231;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8929694	8930300	.	+	.	source_transcript=hg002_chrY_paternal_154.3;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000231;gene_id=HG03009_ch_G0000080;Parent=HG03009_ch_T0000231;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=intron:HG03009_ch_T0000231:0;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8930301	8930378	.	+	.	source_transcript=hg002_chrY_paternal_154.3;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000231;gene_id=HG03009_ch_G0000080;Parent=HG03009_ch_T0000231;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=exon:HG03009_ch_T0000231:1;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	8930301	8930378	.	+	0	source_transcript=hg002_chrY_paternal_154.3;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000231;gene_id=HG03009_ch_G0000080;Parent=HG03009_ch_T0000231;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=CDS:HG03009_ch_T0000231:1;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8930379	8930506	.	+	.	source_transcript=hg002_chrY_paternal_154.3;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000231;gene_id=HG03009_ch_G0000080;Parent=HG03009_ch_T0000231;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=intron:HG03009_ch_T0000231:1;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8930507	8930618	.	+	.	source_transcript=hg002_chrY_paternal_154.3;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000231;gene_id=HG03009_ch_G0000080;Parent=HG03009_ch_T0000231;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=exon:HG03009_ch_T0000231:2;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	8930507	8930618	.	+	0	source_transcript=hg002_chrY_paternal_154.3;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000231;gene_id=HG03009_ch_G0000080;Parent=HG03009_ch_T0000231;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=CDS:HG03009_ch_T0000231:2;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8930619	8930726	.	+	.	source_transcript=hg002_chrY_paternal_154.3;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000231;gene_id=HG03009_ch_G0000080;Parent=HG03009_ch_T0000231;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=intron:HG03009_ch_T0000231:2;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8930727	8930865	.	+	.	source_transcript=hg002_chrY_paternal_154.3;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000231;gene_id=HG03009_ch_G0000080;Parent=HG03009_ch_T0000231;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=exon:HG03009_ch_T0000231:3;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	8930727	8930865	.	+	2	source_transcript=hg002_chrY_paternal_154.3;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000231;gene_id=HG03009_ch_G0000080;Parent=HG03009_ch_T0000231;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=CDS:HG03009_ch_T0000231:3;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8930866	8930971	.	+	.	source_transcript=hg002_chrY_paternal_154.3;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000231;gene_id=HG03009_ch_G0000080;Parent=HG03009_ch_T0000231;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=intron:HG03009_ch_T0000231:3;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8930972	8931053	.	+	.	source_transcript=hg002_chrY_paternal_154.3;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000231;gene_id=HG03009_ch_G0000080;Parent=HG03009_ch_T0000231;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=exon:HG03009_ch_T0000231:4;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	8930972	8931023	.	+	1	source_transcript=hg002_chrY_paternal_154.3;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000231;gene_id=HG03009_ch_G0000080;Parent=HG03009_ch_T0000231;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=CDS:HG03009_ch_T0000231:4;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	8931021	8931023	.	+	0	source_transcript=hg002_chrY_paternal_154.3;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000231;gene_id=HG03009_ch_G0000080;Parent=HG03009_ch_T0000231;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=stop_codon:HG03009_ch_T0000231;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8931054	8931747	.	+	.	source_transcript=hg002_chrY_paternal_154.3;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000231;gene_id=HG03009_ch_G0000080;Parent=HG03009_ch_T0000231;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=intron:HG03009_ch_T0000231:4;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8931748	8931958	.	+	.	source_transcript=hg002_chrY_paternal_154.3;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000231;gene_id=HG03009_ch_G0000080;Parent=HG03009_ch_T0000231;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=exon:HG03009_ch_T0000231:5;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	8929162	8931958	1000	+	.	source_transcript=hg002_chrY_paternal_154.4;source_transcript_name=hg002_chrY_paternal_154.1;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_154.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.4,hg002_chrY_paternal_154.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000232;gene_id=HG03009_ch_G0000080;Parent=HG03009_ch_G0000080;transcript_name=hg002_chrY_paternal_154.1;gene_name=TSPY8;ID=HG03009_ch_T0000232;Name=TSPY8
HG03009_chrY	CAT	exon	8929162	8929693	.	+	.	source_transcript=hg002_chrY_paternal_154.4;source_transcript_name=hg002_chrY_paternal_154.1;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_154.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.4,hg002_chrY_paternal_154.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000232;gene_id=HG03009_ch_G0000080;Parent=HG03009_ch_T0000232;transcript_name=hg002_chrY_paternal_154.1;gene_name=TSPY8;ID=exon:HG03009_ch_T0000232:0;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8929694	8930300	.	+	.	source_transcript=hg002_chrY_paternal_154.4;source_transcript_name=hg002_chrY_paternal_154.1;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_154.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.4,hg002_chrY_paternal_154.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000232;gene_id=HG03009_ch_G0000080;Parent=HG03009_ch_T0000232;transcript_name=hg002_chrY_paternal_154.1;gene_name=TSPY8;ID=intron:HG03009_ch_T0000232:0;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8930301	8930378	.	+	.	source_transcript=hg002_chrY_paternal_154.4;source_transcript_name=hg002_chrY_paternal_154.1;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_154.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.4,hg002_chrY_paternal_154.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000232;gene_id=HG03009_ch_G0000080;Parent=HG03009_ch_T0000232;transcript_name=hg002_chrY_paternal_154.1;gene_name=TSPY8;ID=exon:HG03009_ch_T0000232:1;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8930379	8930506	.	+	.	source_transcript=hg002_chrY_paternal_154.4;source_transcript_name=hg002_chrY_paternal_154.1;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_154.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.4,hg002_chrY_paternal_154.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000232;gene_id=HG03009_ch_G0000080;Parent=HG03009_ch_T0000232;transcript_name=hg002_chrY_paternal_154.1;gene_name=TSPY8;ID=intron:HG03009_ch_T0000232:1;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8930507	8930618	.	+	.	source_transcript=hg002_chrY_paternal_154.4;source_transcript_name=hg002_chrY_paternal_154.1;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_154.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.4,hg002_chrY_paternal_154.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000232;gene_id=HG03009_ch_G0000080;Parent=HG03009_ch_T0000232;transcript_name=hg002_chrY_paternal_154.1;gene_name=TSPY8;ID=exon:HG03009_ch_T0000232:2;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8930619	8930726	.	+	.	source_transcript=hg002_chrY_paternal_154.4;source_transcript_name=hg002_chrY_paternal_154.1;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_154.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.4,hg002_chrY_paternal_154.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000232;gene_id=HG03009_ch_G0000080;Parent=HG03009_ch_T0000232;transcript_name=hg002_chrY_paternal_154.1;gene_name=TSPY8;ID=intron:HG03009_ch_T0000232:2;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8930727	8930865	.	+	.	source_transcript=hg002_chrY_paternal_154.4;source_transcript_name=hg002_chrY_paternal_154.1;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_154.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.4,hg002_chrY_paternal_154.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000232;gene_id=HG03009_ch_G0000080;Parent=HG03009_ch_T0000232;transcript_name=hg002_chrY_paternal_154.1;gene_name=TSPY8;ID=exon:HG03009_ch_T0000232:3;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8930866	8930960	.	+	.	source_transcript=hg002_chrY_paternal_154.4;source_transcript_name=hg002_chrY_paternal_154.1;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_154.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.4,hg002_chrY_paternal_154.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000232;gene_id=HG03009_ch_G0000080;Parent=HG03009_ch_T0000232;transcript_name=hg002_chrY_paternal_154.1;gene_name=TSPY8;ID=intron:HG03009_ch_T0000232:3;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8930961	8931053	.	+	.	source_transcript=hg002_chrY_paternal_154.4;source_transcript_name=hg002_chrY_paternal_154.1;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_154.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.4,hg002_chrY_paternal_154.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000232;gene_id=HG03009_ch_G0000080;Parent=HG03009_ch_T0000232;transcript_name=hg002_chrY_paternal_154.1;gene_name=TSPY8;ID=exon:HG03009_ch_T0000232:4;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8931054	8931747	.	+	.	source_transcript=hg002_chrY_paternal_154.4;source_transcript_name=hg002_chrY_paternal_154.1;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_154.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.4,hg002_chrY_paternal_154.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000232;gene_id=HG03009_ch_G0000080;Parent=HG03009_ch_T0000232;transcript_name=hg002_chrY_paternal_154.1;gene_name=TSPY8;ID=intron:HG03009_ch_T0000232:4;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8931748	8931958	.	+	.	source_transcript=hg002_chrY_paternal_154.4;source_transcript_name=hg002_chrY_paternal_154.1;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_154.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.4,hg002_chrY_paternal_154.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000232;gene_id=HG03009_ch_G0000080;Parent=HG03009_ch_T0000232;transcript_name=hg002_chrY_paternal_154.1;gene_name=TSPY8;ID=exon:HG03009_ch_T0000232:5;Name=TSPY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	8941274	8946879	.	-	.	source_gene_common_name=FAM197Y3;source_gene=hg002_chrY_paternal_155;alternative_source_transcripts=hg002_chrY_paternal_155.1,hg002_chrY_paternal_155.1;gene_id=HG03009_ch_G0000081;gene_biotype=lncRNA;gene_name=FAM197Y3;gene_sources=liftoff;ID=HG03009_ch_G0000081;Name=FAM197Y3
HG03009_chrY	CAT	transcript	8941274	8946879	1000	-	.	source_transcript=hg002_chrY_paternal_155.1;source_transcript_name=hg002_chrY_paternal_155.1;source_gene=hg002_chrY_paternal_155;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_155;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_155.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_155.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_155.1,hg002_chrY_paternal_155.1;transcript_id=HG03009_ch_T0000233;gene_id=HG03009_ch_G0000081;Parent=HG03009_ch_G0000081;transcript_name=hg002_chrY_paternal_155.1;gene_name=FAM197Y3;ID=HG03009_ch_T0000233;Name=FAM197Y3
HG03009_chrY	CAT	exon	8941274	8941333	.	-	.	source_transcript=hg002_chrY_paternal_155.1;source_transcript_name=hg002_chrY_paternal_155.1;source_gene=hg002_chrY_paternal_155;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_155;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_155.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_155.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_155.1,hg002_chrY_paternal_155.1;transcript_id=HG03009_ch_T0000233;gene_id=HG03009_ch_G0000081;Parent=HG03009_ch_T0000233;transcript_name=hg002_chrY_paternal_155.1;gene_name=FAM197Y3;ID=exon:HG03009_ch_T0000233:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8941334	8944884	.	-	.	source_transcript=hg002_chrY_paternal_155.1;source_transcript_name=hg002_chrY_paternal_155.1;source_gene=hg002_chrY_paternal_155;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_155;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_155.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_155.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_155.1,hg002_chrY_paternal_155.1;transcript_id=HG03009_ch_T0000233;gene_id=HG03009_ch_G0000081;Parent=HG03009_ch_T0000233;transcript_name=hg002_chrY_paternal_155.1;gene_name=FAM197Y3;ID=intron:HG03009_ch_T0000233:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8944885	8945043	.	-	.	source_transcript=hg002_chrY_paternal_155.1;source_transcript_name=hg002_chrY_paternal_155.1;source_gene=hg002_chrY_paternal_155;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_155;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_155.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_155.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_155.1,hg002_chrY_paternal_155.1;transcript_id=HG03009_ch_T0000233;gene_id=HG03009_ch_G0000081;Parent=HG03009_ch_T0000233;transcript_name=hg002_chrY_paternal_155.1;gene_name=FAM197Y3;ID=exon:HG03009_ch_T0000233:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8945044	8946545	.	-	.	source_transcript=hg002_chrY_paternal_155.1;source_transcript_name=hg002_chrY_paternal_155.1;source_gene=hg002_chrY_paternal_155;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_155;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_155.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_155.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_155.1,hg002_chrY_paternal_155.1;transcript_id=HG03009_ch_T0000233;gene_id=HG03009_ch_G0000081;Parent=HG03009_ch_T0000233;transcript_name=hg002_chrY_paternal_155.1;gene_name=FAM197Y3;ID=intron:HG03009_ch_T0000233:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8946546	8946691	.	-	.	source_transcript=hg002_chrY_paternal_155.1;source_transcript_name=hg002_chrY_paternal_155.1;source_gene=hg002_chrY_paternal_155;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_155;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_155.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_155.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_155.1,hg002_chrY_paternal_155.1;transcript_id=HG03009_ch_T0000233;gene_id=HG03009_ch_G0000081;Parent=HG03009_ch_T0000233;transcript_name=hg002_chrY_paternal_155.1;gene_name=FAM197Y3;ID=exon:HG03009_ch_T0000233:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8946692	8946777	.	-	.	source_transcript=hg002_chrY_paternal_155.1;source_transcript_name=hg002_chrY_paternal_155.1;source_gene=hg002_chrY_paternal_155;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_155;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_155.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_155.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_155.1,hg002_chrY_paternal_155.1;transcript_id=HG03009_ch_T0000233;gene_id=HG03009_ch_G0000081;Parent=HG03009_ch_T0000233;transcript_name=hg002_chrY_paternal_155.1;gene_name=FAM197Y3;ID=intron:HG03009_ch_T0000233:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8946778	8946879	.	-	.	source_transcript=hg002_chrY_paternal_155.1;source_transcript_name=hg002_chrY_paternal_155.1;source_gene=hg002_chrY_paternal_155;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_155;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_155.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_155.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_155.1,hg002_chrY_paternal_155.1;transcript_id=HG03009_ch_T0000233;gene_id=HG03009_ch_G0000081;Parent=HG03009_ch_T0000233;transcript_name=hg002_chrY_paternal_155.1;gene_name=FAM197Y3;ID=exon:HG03009_ch_T0000233:3;Name=FAM197Y3;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	8949493	8952307	.	+	.	source_gene_common_name=TSPY4;source_gene=hg002_chrY_paternal_160;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;gene_id=HG03009_ch_G0000082;gene_biotype=protein_coding;gene_name=TSPY4;gene_sources=liftoff,augTM;ID=HG03009_ch_G0000082;Name=TSPY4
HG03009_chrY	CAT	transcript	8949493	8952307	100	+	.	source_transcript=hg002_chrY_paternal_160.1;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000234;gene_id=HG03009_ch_G0000082;Parent=HG03009_ch_G0000082;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=HG03009_ch_T0000234;Name=TSPY4
HG03009_chrY	CAT	exon	8949493	8950042	.	+	.	source_transcript=hg002_chrY_paternal_160.1;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000234;gene_id=HG03009_ch_G0000082;Parent=HG03009_ch_T0000234;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000234:0;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	8949539	8950042	.	+	0	source_transcript=hg002_chrY_paternal_160.1;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000234;gene_id=HG03009_ch_G0000082;Parent=HG03009_ch_T0000234;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=CDS:HG03009_ch_T0000234:0;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	8949539	8949541	.	+	0	source_transcript=hg002_chrY_paternal_160.1;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000234;gene_id=HG03009_ch_G0000082;Parent=HG03009_ch_T0000234;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=start_codon:HG03009_ch_T0000234;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8950043	8950649	.	+	.	source_transcript=hg002_chrY_paternal_160.1;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000234;gene_id=HG03009_ch_G0000082;Parent=HG03009_ch_T0000234;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=intron:HG03009_ch_T0000234:0;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8950650	8950727	.	+	.	source_transcript=hg002_chrY_paternal_160.1;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000234;gene_id=HG03009_ch_G0000082;Parent=HG03009_ch_T0000234;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000234:1;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	8950650	8950727	.	+	0	source_transcript=hg002_chrY_paternal_160.1;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000234;gene_id=HG03009_ch_G0000082;Parent=HG03009_ch_T0000234;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=CDS:HG03009_ch_T0000234:1;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8950728	8950855	.	+	.	source_transcript=hg002_chrY_paternal_160.1;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000234;gene_id=HG03009_ch_G0000082;Parent=HG03009_ch_T0000234;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=intron:HG03009_ch_T0000234:1;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8950856	8950967	.	+	.	source_transcript=hg002_chrY_paternal_160.1;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000234;gene_id=HG03009_ch_G0000082;Parent=HG03009_ch_T0000234;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000234:2;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	8950856	8950967	.	+	0	source_transcript=hg002_chrY_paternal_160.1;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000234;gene_id=HG03009_ch_G0000082;Parent=HG03009_ch_T0000234;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=CDS:HG03009_ch_T0000234:2;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8950968	8951068	.	+	.	source_transcript=hg002_chrY_paternal_160.1;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000234;gene_id=HG03009_ch_G0000082;Parent=HG03009_ch_T0000234;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=intron:HG03009_ch_T0000234:2;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8951069	8951214	.	+	.	source_transcript=hg002_chrY_paternal_160.1;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000234;gene_id=HG03009_ch_G0000082;Parent=HG03009_ch_T0000234;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000234:3;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	8951069	8951214	.	+	2	source_transcript=hg002_chrY_paternal_160.1;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000234;gene_id=HG03009_ch_G0000082;Parent=HG03009_ch_T0000234;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=CDS:HG03009_ch_T0000234:3;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8951215	8951320	.	+	.	source_transcript=hg002_chrY_paternal_160.1;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000234;gene_id=HG03009_ch_G0000082;Parent=HG03009_ch_T0000234;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=intron:HG03009_ch_T0000234:3;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8951321	8951402	.	+	.	source_transcript=hg002_chrY_paternal_160.1;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000234;gene_id=HG03009_ch_G0000082;Parent=HG03009_ch_T0000234;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000234:4;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	8951321	8951402	.	+	0	source_transcript=hg002_chrY_paternal_160.1;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000234;gene_id=HG03009_ch_G0000082;Parent=HG03009_ch_T0000234;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=CDS:HG03009_ch_T0000234:4;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8951403	8952096	.	+	.	source_transcript=hg002_chrY_paternal_160.1;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000234;gene_id=HG03009_ch_G0000082;Parent=HG03009_ch_T0000234;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=intron:HG03009_ch_T0000234:4;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8952097	8952307	.	+	.	source_transcript=hg002_chrY_paternal_160.1;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000234;gene_id=HG03009_ch_G0000082;Parent=HG03009_ch_T0000234;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000234:5;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	8952097	8952119	.	+	2	source_transcript=hg002_chrY_paternal_160.1;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000234;gene_id=HG03009_ch_G0000082;Parent=HG03009_ch_T0000234;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=CDS:HG03009_ch_T0000234:5;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	8952117	8952119	.	+	0	source_transcript=hg002_chrY_paternal_160.1;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000234;gene_id=HG03009_ch_G0000082;Parent=HG03009_ch_T0000234;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=stop_codon:HG03009_ch_T0000234;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	8949493	8952307	100	+	.	source_transcript=hg002_chrY_paternal_160.2;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000235;gene_id=HG03009_ch_G0000082;Parent=HG03009_ch_G0000082;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=HG03009_ch_T0000235;Name=TSPY4
HG03009_chrY	CAT	exon	8949493	8950042	.	+	.	source_transcript=hg002_chrY_paternal_160.2;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000235;gene_id=HG03009_ch_G0000082;Parent=HG03009_ch_T0000235;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000235:0;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	8949539	8950042	.	+	0	source_transcript=hg002_chrY_paternal_160.2;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000235;gene_id=HG03009_ch_G0000082;Parent=HG03009_ch_T0000235;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=CDS:HG03009_ch_T0000235:0;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	8949539	8949541	.	+	0	source_transcript=hg002_chrY_paternal_160.2;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000235;gene_id=HG03009_ch_G0000082;Parent=HG03009_ch_T0000235;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=start_codon:HG03009_ch_T0000235;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8950043	8950649	.	+	.	source_transcript=hg002_chrY_paternal_160.2;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000235;gene_id=HG03009_ch_G0000082;Parent=HG03009_ch_T0000235;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=intron:HG03009_ch_T0000235:0;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8950650	8950727	.	+	.	source_transcript=hg002_chrY_paternal_160.2;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000235;gene_id=HG03009_ch_G0000082;Parent=HG03009_ch_T0000235;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000235:1;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	8950650	8950727	.	+	0	source_transcript=hg002_chrY_paternal_160.2;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000235;gene_id=HG03009_ch_G0000082;Parent=HG03009_ch_T0000235;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=CDS:HG03009_ch_T0000235:1;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8950728	8950855	.	+	.	source_transcript=hg002_chrY_paternal_160.2;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000235;gene_id=HG03009_ch_G0000082;Parent=HG03009_ch_T0000235;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=intron:HG03009_ch_T0000235:1;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8950856	8950967	.	+	.	source_transcript=hg002_chrY_paternal_160.2;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000235;gene_id=HG03009_ch_G0000082;Parent=HG03009_ch_T0000235;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000235:2;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	8950856	8950967	.	+	0	source_transcript=hg002_chrY_paternal_160.2;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000235;gene_id=HG03009_ch_G0000082;Parent=HG03009_ch_T0000235;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=CDS:HG03009_ch_T0000235:2;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8950968	8951068	.	+	.	source_transcript=hg002_chrY_paternal_160.2;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000235;gene_id=HG03009_ch_G0000082;Parent=HG03009_ch_T0000235;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=intron:HG03009_ch_T0000235:2;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8951069	8951214	.	+	.	source_transcript=hg002_chrY_paternal_160.2;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000235;gene_id=HG03009_ch_G0000082;Parent=HG03009_ch_T0000235;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000235:3;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	8951069	8951214	.	+	2	source_transcript=hg002_chrY_paternal_160.2;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000235;gene_id=HG03009_ch_G0000082;Parent=HG03009_ch_T0000235;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=CDS:HG03009_ch_T0000235:3;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8951215	8951309	.	+	.	source_transcript=hg002_chrY_paternal_160.2;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000235;gene_id=HG03009_ch_G0000082;Parent=HG03009_ch_T0000235;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=intron:HG03009_ch_T0000235:3;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8951310	8951402	.	+	.	source_transcript=hg002_chrY_paternal_160.2;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000235;gene_id=HG03009_ch_G0000082;Parent=HG03009_ch_T0000235;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000235:4;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	8951310	8951372	.	+	0	source_transcript=hg002_chrY_paternal_160.2;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000235;gene_id=HG03009_ch_G0000082;Parent=HG03009_ch_T0000235;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=CDS:HG03009_ch_T0000235:4;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	8951370	8951372	.	+	0	source_transcript=hg002_chrY_paternal_160.2;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000235;gene_id=HG03009_ch_G0000082;Parent=HG03009_ch_T0000235;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=stop_codon:HG03009_ch_T0000235;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8951403	8952096	.	+	.	source_transcript=hg002_chrY_paternal_160.2;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000235;gene_id=HG03009_ch_G0000082;Parent=HG03009_ch_T0000235;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=intron:HG03009_ch_T0000235:4;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8952097	8952307	.	+	.	source_transcript=hg002_chrY_paternal_160.2;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000235;gene_id=HG03009_ch_G0000082;Parent=HG03009_ch_T0000235;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000235:5;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	8949493	8952307	100	+	.	source_transcript=hg002_chrY_paternal_160.3;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000236;gene_id=HG03009_ch_G0000082;Parent=HG03009_ch_G0000082;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=HG03009_ch_T0000236;Name=TSPY4
HG03009_chrY	CAT	exon	8949493	8950042	.	+	.	source_transcript=hg002_chrY_paternal_160.3;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000236;gene_id=HG03009_ch_G0000082;Parent=HG03009_ch_T0000236;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000236:0;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	8949539	8950042	.	+	0	source_transcript=hg002_chrY_paternal_160.3;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000236;gene_id=HG03009_ch_G0000082;Parent=HG03009_ch_T0000236;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=CDS:HG03009_ch_T0000236:0;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	8949539	8949541	.	+	0	source_transcript=hg002_chrY_paternal_160.3;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000236;gene_id=HG03009_ch_G0000082;Parent=HG03009_ch_T0000236;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=start_codon:HG03009_ch_T0000236;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8950043	8950649	.	+	.	source_transcript=hg002_chrY_paternal_160.3;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000236;gene_id=HG03009_ch_G0000082;Parent=HG03009_ch_T0000236;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=intron:HG03009_ch_T0000236:0;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8950650	8950727	.	+	.	source_transcript=hg002_chrY_paternal_160.3;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000236;gene_id=HG03009_ch_G0000082;Parent=HG03009_ch_T0000236;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000236:1;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	8950650	8950727	.	+	0	source_transcript=hg002_chrY_paternal_160.3;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000236;gene_id=HG03009_ch_G0000082;Parent=HG03009_ch_T0000236;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=CDS:HG03009_ch_T0000236:1;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8950728	8950855	.	+	.	source_transcript=hg002_chrY_paternal_160.3;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000236;gene_id=HG03009_ch_G0000082;Parent=HG03009_ch_T0000236;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=intron:HG03009_ch_T0000236:1;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8950856	8950967	.	+	.	source_transcript=hg002_chrY_paternal_160.3;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000236;gene_id=HG03009_ch_G0000082;Parent=HG03009_ch_T0000236;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000236:2;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	8950856	8950967	.	+	0	source_transcript=hg002_chrY_paternal_160.3;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000236;gene_id=HG03009_ch_G0000082;Parent=HG03009_ch_T0000236;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=CDS:HG03009_ch_T0000236:2;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8950968	8951075	.	+	.	source_transcript=hg002_chrY_paternal_160.3;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000236;gene_id=HG03009_ch_G0000082;Parent=HG03009_ch_T0000236;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=intron:HG03009_ch_T0000236:2;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8951076	8951214	.	+	.	source_transcript=hg002_chrY_paternal_160.3;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000236;gene_id=HG03009_ch_G0000082;Parent=HG03009_ch_T0000236;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000236:3;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	8951076	8951214	.	+	2	source_transcript=hg002_chrY_paternal_160.3;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000236;gene_id=HG03009_ch_G0000082;Parent=HG03009_ch_T0000236;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=CDS:HG03009_ch_T0000236:3;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8951215	8951320	.	+	.	source_transcript=hg002_chrY_paternal_160.3;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000236;gene_id=HG03009_ch_G0000082;Parent=HG03009_ch_T0000236;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=intron:HG03009_ch_T0000236:3;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8951321	8951402	.	+	.	source_transcript=hg002_chrY_paternal_160.3;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000236;gene_id=HG03009_ch_G0000082;Parent=HG03009_ch_T0000236;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000236:4;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	8951321	8951372	.	+	1	source_transcript=hg002_chrY_paternal_160.3;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000236;gene_id=HG03009_ch_G0000082;Parent=HG03009_ch_T0000236;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=CDS:HG03009_ch_T0000236:4;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	8951370	8951372	.	+	0	source_transcript=hg002_chrY_paternal_160.3;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000236;gene_id=HG03009_ch_G0000082;Parent=HG03009_ch_T0000236;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=stop_codon:HG03009_ch_T0000236;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8951403	8952096	.	+	.	source_transcript=hg002_chrY_paternal_160.3;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000236;gene_id=HG03009_ch_G0000082;Parent=HG03009_ch_T0000236;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=intron:HG03009_ch_T0000236:4;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8952097	8952307	.	+	.	source_transcript=hg002_chrY_paternal_160.3;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000236;gene_id=HG03009_ch_G0000082;Parent=HG03009_ch_T0000236;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000236:5;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	8949493	8952307	1000	+	.	source_transcript=hg002_chrY_paternal_160.4;source_transcript_name=hg002_chrY_paternal_160.1;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_160.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.4,hg002_chrY_paternal_156.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000237;gene_id=HG03009_ch_G0000082;Parent=HG03009_ch_G0000082;transcript_name=hg002_chrY_paternal_160.1;gene_name=TSPY4;ID=HG03009_ch_T0000237;Name=TSPY4
HG03009_chrY	CAT	exon	8949493	8950042	.	+	.	source_transcript=hg002_chrY_paternal_160.4;source_transcript_name=hg002_chrY_paternal_160.1;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_160.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.4,hg002_chrY_paternal_156.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000237;gene_id=HG03009_ch_G0000082;Parent=HG03009_ch_T0000237;transcript_name=hg002_chrY_paternal_160.1;gene_name=TSPY4;ID=exon:HG03009_ch_T0000237:0;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8950043	8950649	.	+	.	source_transcript=hg002_chrY_paternal_160.4;source_transcript_name=hg002_chrY_paternal_160.1;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_160.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.4,hg002_chrY_paternal_156.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000237;gene_id=HG03009_ch_G0000082;Parent=HG03009_ch_T0000237;transcript_name=hg002_chrY_paternal_160.1;gene_name=TSPY4;ID=intron:HG03009_ch_T0000237:0;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8950650	8950727	.	+	.	source_transcript=hg002_chrY_paternal_160.4;source_transcript_name=hg002_chrY_paternal_160.1;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_160.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.4,hg002_chrY_paternal_156.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000237;gene_id=HG03009_ch_G0000082;Parent=HG03009_ch_T0000237;transcript_name=hg002_chrY_paternal_160.1;gene_name=TSPY4;ID=exon:HG03009_ch_T0000237:1;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8950728	8950855	.	+	.	source_transcript=hg002_chrY_paternal_160.4;source_transcript_name=hg002_chrY_paternal_160.1;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_160.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.4,hg002_chrY_paternal_156.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000237;gene_id=HG03009_ch_G0000082;Parent=HG03009_ch_T0000237;transcript_name=hg002_chrY_paternal_160.1;gene_name=TSPY4;ID=intron:HG03009_ch_T0000237:1;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8950856	8950967	.	+	.	source_transcript=hg002_chrY_paternal_160.4;source_transcript_name=hg002_chrY_paternal_160.1;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_160.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.4,hg002_chrY_paternal_156.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000237;gene_id=HG03009_ch_G0000082;Parent=HG03009_ch_T0000237;transcript_name=hg002_chrY_paternal_160.1;gene_name=TSPY4;ID=exon:HG03009_ch_T0000237:2;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8950968	8951075	.	+	.	source_transcript=hg002_chrY_paternal_160.4;source_transcript_name=hg002_chrY_paternal_160.1;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_160.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.4,hg002_chrY_paternal_156.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000237;gene_id=HG03009_ch_G0000082;Parent=HG03009_ch_T0000237;transcript_name=hg002_chrY_paternal_160.1;gene_name=TSPY4;ID=intron:HG03009_ch_T0000237:2;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8951076	8951214	.	+	.	source_transcript=hg002_chrY_paternal_160.4;source_transcript_name=hg002_chrY_paternal_160.1;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_160.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.4,hg002_chrY_paternal_156.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000237;gene_id=HG03009_ch_G0000082;Parent=HG03009_ch_T0000237;transcript_name=hg002_chrY_paternal_160.1;gene_name=TSPY4;ID=exon:HG03009_ch_T0000237:3;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8951215	8951309	.	+	.	source_transcript=hg002_chrY_paternal_160.4;source_transcript_name=hg002_chrY_paternal_160.1;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_160.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.4,hg002_chrY_paternal_156.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000237;gene_id=HG03009_ch_G0000082;Parent=HG03009_ch_T0000237;transcript_name=hg002_chrY_paternal_160.1;gene_name=TSPY4;ID=intron:HG03009_ch_T0000237:3;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8951310	8951402	.	+	.	source_transcript=hg002_chrY_paternal_160.4;source_transcript_name=hg002_chrY_paternal_160.1;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_160.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.4,hg002_chrY_paternal_156.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000237;gene_id=HG03009_ch_G0000082;Parent=HG03009_ch_T0000237;transcript_name=hg002_chrY_paternal_160.1;gene_name=TSPY4;ID=exon:HG03009_ch_T0000237:4;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8951403	8952096	.	+	.	source_transcript=hg002_chrY_paternal_160.4;source_transcript_name=hg002_chrY_paternal_160.1;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_160.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.4,hg002_chrY_paternal_156.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000237;gene_id=HG03009_ch_G0000082;Parent=HG03009_ch_T0000237;transcript_name=hg002_chrY_paternal_160.1;gene_name=TSPY4;ID=intron:HG03009_ch_T0000237:4;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8952097	8952307	.	+	.	source_transcript=hg002_chrY_paternal_160.4;source_transcript_name=hg002_chrY_paternal_160.1;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_160.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.4,hg002_chrY_paternal_156.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000237;gene_id=HG03009_ch_G0000082;Parent=HG03009_ch_T0000237;transcript_name=hg002_chrY_paternal_160.1;gene_name=TSPY4;ID=exon:HG03009_ch_T0000237:5;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	8961575	8967253	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_157;alternative_source_transcripts=hg002_chrY_paternal_157.1,hg002_chrY_paternal_157.1;gene_id=HG03009_ch_G0000083;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=HG03009_ch_G0000083;Name=FAM197Y2
HG03009_chrY	CAT	transcript	8961575	8967253	1000	-	.	source_transcript=hg002_chrY_paternal_157.1;source_transcript_name=hg002_chrY_paternal_157.1;source_gene=hg002_chrY_paternal_157;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_157;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_157.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_157.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_157.1,hg002_chrY_paternal_157.1;transcript_id=HG03009_ch_T0000238;gene_id=HG03009_ch_G0000083;Parent=HG03009_ch_G0000083;transcript_name=hg002_chrY_paternal_157.1;gene_name=FAM197Y2;ID=HG03009_ch_T0000238;Name=FAM197Y2
HG03009_chrY	CAT	exon	8961575	8961634	.	-	.	source_transcript=hg002_chrY_paternal_157.1;source_transcript_name=hg002_chrY_paternal_157.1;source_gene=hg002_chrY_paternal_157;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_157;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_157.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_157.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_157.1,hg002_chrY_paternal_157.1;transcript_id=HG03009_ch_T0000238;gene_id=HG03009_ch_G0000083;Parent=HG03009_ch_T0000238;transcript_name=hg002_chrY_paternal_157.1;gene_name=FAM197Y2;ID=exon:HG03009_ch_T0000238:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8961635	8965184	.	-	.	source_transcript=hg002_chrY_paternal_157.1;source_transcript_name=hg002_chrY_paternal_157.1;source_gene=hg002_chrY_paternal_157;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_157;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_157.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_157.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_157.1,hg002_chrY_paternal_157.1;transcript_id=HG03009_ch_T0000238;gene_id=HG03009_ch_G0000083;Parent=HG03009_ch_T0000238;transcript_name=hg002_chrY_paternal_157.1;gene_name=FAM197Y2;ID=intron:HG03009_ch_T0000238:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8965185	8965343	.	-	.	source_transcript=hg002_chrY_paternal_157.1;source_transcript_name=hg002_chrY_paternal_157.1;source_gene=hg002_chrY_paternal_157;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_157;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_157.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_157.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_157.1,hg002_chrY_paternal_157.1;transcript_id=HG03009_ch_T0000238;gene_id=HG03009_ch_G0000083;Parent=HG03009_ch_T0000238;transcript_name=hg002_chrY_paternal_157.1;gene_name=FAM197Y2;ID=exon:HG03009_ch_T0000238:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8965344	8966830	.	-	.	source_transcript=hg002_chrY_paternal_157.1;source_transcript_name=hg002_chrY_paternal_157.1;source_gene=hg002_chrY_paternal_157;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_157;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_157.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_157.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_157.1,hg002_chrY_paternal_157.1;transcript_id=HG03009_ch_T0000238;gene_id=HG03009_ch_G0000083;Parent=HG03009_ch_T0000238;transcript_name=hg002_chrY_paternal_157.1;gene_name=FAM197Y2;ID=intron:HG03009_ch_T0000238:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8966831	8966976	.	-	.	source_transcript=hg002_chrY_paternal_157.1;source_transcript_name=hg002_chrY_paternal_157.1;source_gene=hg002_chrY_paternal_157;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_157;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_157.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_157.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_157.1,hg002_chrY_paternal_157.1;transcript_id=HG03009_ch_T0000238;gene_id=HG03009_ch_G0000083;Parent=HG03009_ch_T0000238;transcript_name=hg002_chrY_paternal_157.1;gene_name=FAM197Y2;ID=exon:HG03009_ch_T0000238:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8966977	8967062	.	-	.	source_transcript=hg002_chrY_paternal_157.1;source_transcript_name=hg002_chrY_paternal_157.1;source_gene=hg002_chrY_paternal_157;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_157;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_157.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_157.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_157.1,hg002_chrY_paternal_157.1;transcript_id=HG03009_ch_T0000238;gene_id=HG03009_ch_G0000083;Parent=HG03009_ch_T0000238;transcript_name=hg002_chrY_paternal_157.1;gene_name=FAM197Y2;ID=intron:HG03009_ch_T0000238:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8967063	8967253	.	-	.	source_transcript=hg002_chrY_paternal_157.1;source_transcript_name=hg002_chrY_paternal_157.1;source_gene=hg002_chrY_paternal_157;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_157;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_157.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_157.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_157.1,hg002_chrY_paternal_157.1;transcript_id=HG03009_ch_T0000238;gene_id=HG03009_ch_G0000083;Parent=HG03009_ch_T0000238;transcript_name=hg002_chrY_paternal_157.1;gene_name=FAM197Y2;ID=exon:HG03009_ch_T0000238:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	8969778	8972574	.	+	.	source_gene_common_name=TSPY1;source_gene=hg002_chrY_paternal_158;alternative_source_transcripts=hg002_chrY_paternal_158.2;gene_id=HG03009_ch_G0000084;gene_biotype=protein_coding;gene_name=TSPY1;gene_sources=augTM,transMap;ID=HG03009_ch_G0000084;Name=TSPY1
HG03009_chrY	CAT	transcript	8969778	8972574	9980	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=299.85;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000239;gene_id=HG03009_ch_G0000084;Parent=HG03009_ch_G0000084;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=HG03009_ch_T0000239;Name=TSPY1
HG03009_chrY	CAT	exon	8969778	8969910	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000239;gene_id=HG03009_ch_G0000084;Parent=HG03009_ch_T0000239;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000239:0;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	8969824	8969910	.	+	0	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000239;gene_id=HG03009_ch_G0000084;Parent=HG03009_ch_T0000239;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000239:0;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	8969824	8969826	.	+	0	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000239;gene_id=HG03009_ch_G0000084;Parent=HG03009_ch_T0000239;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=start_codon:HG03009_ch_T0000239;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8969911	8970171	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000239;gene_id=HG03009_ch_G0000084;Parent=HG03009_ch_T0000239;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000239:0;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8970172	8970309	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000239;gene_id=HG03009_ch_G0000084;Parent=HG03009_ch_T0000239;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000239:1;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	8970172	8970309	.	+	0	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000239;gene_id=HG03009_ch_G0000084;Parent=HG03009_ch_T0000239;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000239:1;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8970310	8970916	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000239;gene_id=HG03009_ch_G0000084;Parent=HG03009_ch_T0000239;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000239:1;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8970917	8970994	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000239;gene_id=HG03009_ch_G0000084;Parent=HG03009_ch_T0000239;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000239:2;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	8970917	8970994	.	+	0	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000239;gene_id=HG03009_ch_G0000084;Parent=HG03009_ch_T0000239;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000239:2;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8970995	8971122	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000239;gene_id=HG03009_ch_G0000084;Parent=HG03009_ch_T0000239;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000239:2;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8971123	8971234	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000239;gene_id=HG03009_ch_G0000084;Parent=HG03009_ch_T0000239;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000239:3;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	8971123	8971234	.	+	0	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000239;gene_id=HG03009_ch_G0000084;Parent=HG03009_ch_T0000239;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000239:3;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8971235	8971335	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000239;gene_id=HG03009_ch_G0000084;Parent=HG03009_ch_T0000239;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000239:3;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8971336	8971481	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000239;gene_id=HG03009_ch_G0000084;Parent=HG03009_ch_T0000239;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000239:4;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	8971336	8971481	.	+	2	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000239;gene_id=HG03009_ch_G0000084;Parent=HG03009_ch_T0000239;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000239:4;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8971482	8971587	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000239;gene_id=HG03009_ch_G0000084;Parent=HG03009_ch_T0000239;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000239:4;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8971588	8971669	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000239;gene_id=HG03009_ch_G0000084;Parent=HG03009_ch_T0000239;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000239:5;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	8971588	8971669	.	+	0	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000239;gene_id=HG03009_ch_G0000084;Parent=HG03009_ch_T0000239;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000239:5;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8971670	8972363	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000239;gene_id=HG03009_ch_G0000084;Parent=HG03009_ch_T0000239;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000239:5;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8972364	8972574	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000239;gene_id=HG03009_ch_G0000084;Parent=HG03009_ch_T0000239;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000239:6;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	8972364	8972386	.	+	2	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000239;gene_id=HG03009_ch_G0000084;Parent=HG03009_ch_T0000239;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000239:6;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	8972384	8972386	.	+	0	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000239;gene_id=HG03009_ch_G0000084;Parent=HG03009_ch_T0000239;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=stop_codon:HG03009_ch_T0000239;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	8981867	8987559	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_159;alternative_source_transcripts=hg002_chrY_paternal_159.1,hg002_chrY_paternal_159.1;gene_id=HG03009_ch_G0000085;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=HG03009_ch_G0000085;Name=FAM197Y2
HG03009_chrY	CAT	transcript	8981867	8987559	1000	-	.	source_transcript=hg002_chrY_paternal_159.1;source_transcript_name=hg002_chrY_paternal_159.1;source_gene=hg002_chrY_paternal_159;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_159;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_159.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_159.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_159.1,hg002_chrY_paternal_159.1;transcript_id=HG03009_ch_T0000240;gene_id=HG03009_ch_G0000085;Parent=HG03009_ch_G0000085;transcript_name=hg002_chrY_paternal_159.1;gene_name=FAM197Y2;ID=HG03009_ch_T0000240;Name=FAM197Y2
HG03009_chrY	CAT	exon	8981867	8981926	.	-	.	source_transcript=hg002_chrY_paternal_159.1;source_transcript_name=hg002_chrY_paternal_159.1;source_gene=hg002_chrY_paternal_159;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_159;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_159.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_159.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_159.1,hg002_chrY_paternal_159.1;transcript_id=HG03009_ch_T0000240;gene_id=HG03009_ch_G0000085;Parent=HG03009_ch_T0000240;transcript_name=hg002_chrY_paternal_159.1;gene_name=FAM197Y2;ID=exon:HG03009_ch_T0000240:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8981927	8985475	.	-	.	source_transcript=hg002_chrY_paternal_159.1;source_transcript_name=hg002_chrY_paternal_159.1;source_gene=hg002_chrY_paternal_159;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_159;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_159.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_159.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_159.1,hg002_chrY_paternal_159.1;transcript_id=HG03009_ch_T0000240;gene_id=HG03009_ch_G0000085;Parent=HG03009_ch_T0000240;transcript_name=hg002_chrY_paternal_159.1;gene_name=FAM197Y2;ID=intron:HG03009_ch_T0000240:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8985476	8985634	.	-	.	source_transcript=hg002_chrY_paternal_159.1;source_transcript_name=hg002_chrY_paternal_159.1;source_gene=hg002_chrY_paternal_159;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_159;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_159.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_159.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_159.1,hg002_chrY_paternal_159.1;transcript_id=HG03009_ch_T0000240;gene_id=HG03009_ch_G0000085;Parent=HG03009_ch_T0000240;transcript_name=hg002_chrY_paternal_159.1;gene_name=FAM197Y2;ID=exon:HG03009_ch_T0000240:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8985635	8987136	.	-	.	source_transcript=hg002_chrY_paternal_159.1;source_transcript_name=hg002_chrY_paternal_159.1;source_gene=hg002_chrY_paternal_159;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_159;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_159.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_159.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_159.1,hg002_chrY_paternal_159.1;transcript_id=HG03009_ch_T0000240;gene_id=HG03009_ch_G0000085;Parent=HG03009_ch_T0000240;transcript_name=hg002_chrY_paternal_159.1;gene_name=FAM197Y2;ID=intron:HG03009_ch_T0000240:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8987137	8987282	.	-	.	source_transcript=hg002_chrY_paternal_159.1;source_transcript_name=hg002_chrY_paternal_159.1;source_gene=hg002_chrY_paternal_159;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_159;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_159.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_159.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_159.1,hg002_chrY_paternal_159.1;transcript_id=HG03009_ch_T0000240;gene_id=HG03009_ch_G0000085;Parent=HG03009_ch_T0000240;transcript_name=hg002_chrY_paternal_159.1;gene_name=FAM197Y2;ID=exon:HG03009_ch_T0000240:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8987283	8987368	.	-	.	source_transcript=hg002_chrY_paternal_159.1;source_transcript_name=hg002_chrY_paternal_159.1;source_gene=hg002_chrY_paternal_159;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_159;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_159.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_159.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_159.1,hg002_chrY_paternal_159.1;transcript_id=HG03009_ch_T0000240;gene_id=HG03009_ch_G0000085;Parent=HG03009_ch_T0000240;transcript_name=hg002_chrY_paternal_159.1;gene_name=FAM197Y2;ID=intron:HG03009_ch_T0000240:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8987369	8987559	.	-	.	source_transcript=hg002_chrY_paternal_159.1;source_transcript_name=hg002_chrY_paternal_159.1;source_gene=hg002_chrY_paternal_159;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_159;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_159.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_159.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_159.1,hg002_chrY_paternal_159.1;transcript_id=HG03009_ch_T0000240;gene_id=HG03009_ch_G0000085;Parent=HG03009_ch_T0000240;transcript_name=hg002_chrY_paternal_159.1;gene_name=FAM197Y2;ID=exon:HG03009_ch_T0000240:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	8990083	8992897	.	+	.	source_gene_common_name=TSPY4;source_gene=hg002_chrY_paternal_216;alternative_source_transcripts=hg002_chrY_paternal_160.1,hg002_chrY_paternal_160.1;gene_id=HG03009_ch_G0000086;gene_biotype=protein_coding;gene_name=TSPY4;gene_sources=liftoff;ID=HG03009_ch_G0000086;Name=TSPY4
HG03009_chrY	CAT	transcript	8990083	8992897	10000	+	.	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.1,hg002_chrY_paternal_160.1;transcript_id=HG03009_ch_T0000241;gene_id=HG03009_ch_G0000086;Parent=HG03009_ch_G0000086;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=HG03009_ch_T0000241;Name=TSPY4
HG03009_chrY	CAT	exon	8990083	8990632	.	+	.	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.1,hg002_chrY_paternal_160.1;transcript_id=HG03009_ch_T0000241;gene_id=HG03009_ch_G0000086;Parent=HG03009_ch_T0000241;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000241:0;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	8990129	8990632	.	+	0	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.1,hg002_chrY_paternal_160.1;transcript_id=HG03009_ch_T0000241;gene_id=HG03009_ch_G0000086;Parent=HG03009_ch_T0000241;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:HG03009_ch_T0000241:0;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	8990129	8990131	.	+	0	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.1,hg002_chrY_paternal_160.1;transcript_id=HG03009_ch_T0000241;gene_id=HG03009_ch_G0000086;Parent=HG03009_ch_T0000241;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=start_codon:HG03009_ch_T0000241;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8990633	8991239	.	+	.	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.1,hg002_chrY_paternal_160.1;transcript_id=HG03009_ch_T0000241;gene_id=HG03009_ch_G0000086;Parent=HG03009_ch_T0000241;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=intron:HG03009_ch_T0000241:0;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8991240	8991317	.	+	.	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.1,hg002_chrY_paternal_160.1;transcript_id=HG03009_ch_T0000241;gene_id=HG03009_ch_G0000086;Parent=HG03009_ch_T0000241;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000241:1;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	8991240	8991317	.	+	0	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.1,hg002_chrY_paternal_160.1;transcript_id=HG03009_ch_T0000241;gene_id=HG03009_ch_G0000086;Parent=HG03009_ch_T0000241;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:HG03009_ch_T0000241:1;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8991318	8991445	.	+	.	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.1,hg002_chrY_paternal_160.1;transcript_id=HG03009_ch_T0000241;gene_id=HG03009_ch_G0000086;Parent=HG03009_ch_T0000241;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=intron:HG03009_ch_T0000241:1;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8991446	8991557	.	+	.	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.1,hg002_chrY_paternal_160.1;transcript_id=HG03009_ch_T0000241;gene_id=HG03009_ch_G0000086;Parent=HG03009_ch_T0000241;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000241:2;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	8991446	8991557	.	+	0	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.1,hg002_chrY_paternal_160.1;transcript_id=HG03009_ch_T0000241;gene_id=HG03009_ch_G0000086;Parent=HG03009_ch_T0000241;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:HG03009_ch_T0000241:2;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8991558	8991658	.	+	.	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.1,hg002_chrY_paternal_160.1;transcript_id=HG03009_ch_T0000241;gene_id=HG03009_ch_G0000086;Parent=HG03009_ch_T0000241;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=intron:HG03009_ch_T0000241:2;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8991659	8991804	.	+	.	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.1,hg002_chrY_paternal_160.1;transcript_id=HG03009_ch_T0000241;gene_id=HG03009_ch_G0000086;Parent=HG03009_ch_T0000241;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000241:3;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	8991659	8991804	.	+	2	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.1,hg002_chrY_paternal_160.1;transcript_id=HG03009_ch_T0000241;gene_id=HG03009_ch_G0000086;Parent=HG03009_ch_T0000241;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:HG03009_ch_T0000241:3;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8991805	8991910	.	+	.	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.1,hg002_chrY_paternal_160.1;transcript_id=HG03009_ch_T0000241;gene_id=HG03009_ch_G0000086;Parent=HG03009_ch_T0000241;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=intron:HG03009_ch_T0000241:3;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8991911	8991992	.	+	.	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.1,hg002_chrY_paternal_160.1;transcript_id=HG03009_ch_T0000241;gene_id=HG03009_ch_G0000086;Parent=HG03009_ch_T0000241;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000241:4;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	8991911	8991992	.	+	0	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.1,hg002_chrY_paternal_160.1;transcript_id=HG03009_ch_T0000241;gene_id=HG03009_ch_G0000086;Parent=HG03009_ch_T0000241;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:HG03009_ch_T0000241:4;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8991993	8992686	.	+	.	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.1,hg002_chrY_paternal_160.1;transcript_id=HG03009_ch_T0000241;gene_id=HG03009_ch_G0000086;Parent=HG03009_ch_T0000241;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=intron:HG03009_ch_T0000241:4;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8992687	8992897	.	+	.	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.1,hg002_chrY_paternal_160.1;transcript_id=HG03009_ch_T0000241;gene_id=HG03009_ch_G0000086;Parent=HG03009_ch_T0000241;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000241:5;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	8992687	8992709	.	+	2	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.1,hg002_chrY_paternal_160.1;transcript_id=HG03009_ch_T0000241;gene_id=HG03009_ch_G0000086;Parent=HG03009_ch_T0000241;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:HG03009_ch_T0000241:5;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	8992707	8992709	.	+	0	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.1,hg002_chrY_paternal_160.1;transcript_id=HG03009_ch_T0000241;gene_id=HG03009_ch_G0000086;Parent=HG03009_ch_T0000241;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=stop_codon:HG03009_ch_T0000241;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	8990083	8992897	10000	+	.	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.2,hg002_chrY_paternal_160.2;transcript_id=HG03009_ch_T0000242;gene_id=HG03009_ch_G0000086;Parent=HG03009_ch_G0000086;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=HG03009_ch_T0000242;Name=TSPY4
HG03009_chrY	CAT	exon	8990083	8990632	.	+	.	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.2,hg002_chrY_paternal_160.2;transcript_id=HG03009_ch_T0000242;gene_id=HG03009_ch_G0000086;Parent=HG03009_ch_T0000242;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000242:0;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	8990129	8990632	.	+	0	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.2,hg002_chrY_paternal_160.2;transcript_id=HG03009_ch_T0000242;gene_id=HG03009_ch_G0000086;Parent=HG03009_ch_T0000242;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:HG03009_ch_T0000242:0;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	8990129	8990131	.	+	0	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.2,hg002_chrY_paternal_160.2;transcript_id=HG03009_ch_T0000242;gene_id=HG03009_ch_G0000086;Parent=HG03009_ch_T0000242;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=start_codon:HG03009_ch_T0000242;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8990633	8991239	.	+	.	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.2,hg002_chrY_paternal_160.2;transcript_id=HG03009_ch_T0000242;gene_id=HG03009_ch_G0000086;Parent=HG03009_ch_T0000242;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=intron:HG03009_ch_T0000242:0;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8991240	8991317	.	+	.	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.2,hg002_chrY_paternal_160.2;transcript_id=HG03009_ch_T0000242;gene_id=HG03009_ch_G0000086;Parent=HG03009_ch_T0000242;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000242:1;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	8991240	8991317	.	+	0	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.2,hg002_chrY_paternal_160.2;transcript_id=HG03009_ch_T0000242;gene_id=HG03009_ch_G0000086;Parent=HG03009_ch_T0000242;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:HG03009_ch_T0000242:1;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8991318	8991445	.	+	.	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.2,hg002_chrY_paternal_160.2;transcript_id=HG03009_ch_T0000242;gene_id=HG03009_ch_G0000086;Parent=HG03009_ch_T0000242;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=intron:HG03009_ch_T0000242:1;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8991446	8991557	.	+	.	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.2,hg002_chrY_paternal_160.2;transcript_id=HG03009_ch_T0000242;gene_id=HG03009_ch_G0000086;Parent=HG03009_ch_T0000242;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000242:2;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	8991446	8991557	.	+	0	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.2,hg002_chrY_paternal_160.2;transcript_id=HG03009_ch_T0000242;gene_id=HG03009_ch_G0000086;Parent=HG03009_ch_T0000242;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:HG03009_ch_T0000242:2;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8991558	8991658	.	+	.	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.2,hg002_chrY_paternal_160.2;transcript_id=HG03009_ch_T0000242;gene_id=HG03009_ch_G0000086;Parent=HG03009_ch_T0000242;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=intron:HG03009_ch_T0000242:2;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8991659	8991804	.	+	.	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.2,hg002_chrY_paternal_160.2;transcript_id=HG03009_ch_T0000242;gene_id=HG03009_ch_G0000086;Parent=HG03009_ch_T0000242;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000242:3;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	8991659	8991804	.	+	2	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.2,hg002_chrY_paternal_160.2;transcript_id=HG03009_ch_T0000242;gene_id=HG03009_ch_G0000086;Parent=HG03009_ch_T0000242;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:HG03009_ch_T0000242:3;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8991805	8991899	.	+	.	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.2,hg002_chrY_paternal_160.2;transcript_id=HG03009_ch_T0000242;gene_id=HG03009_ch_G0000086;Parent=HG03009_ch_T0000242;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=intron:HG03009_ch_T0000242:3;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8991900	8991992	.	+	.	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.2,hg002_chrY_paternal_160.2;transcript_id=HG03009_ch_T0000242;gene_id=HG03009_ch_G0000086;Parent=HG03009_ch_T0000242;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000242:4;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	8991900	8991962	.	+	0	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.2,hg002_chrY_paternal_160.2;transcript_id=HG03009_ch_T0000242;gene_id=HG03009_ch_G0000086;Parent=HG03009_ch_T0000242;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:HG03009_ch_T0000242:4;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	8991960	8991962	.	+	0	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.2,hg002_chrY_paternal_160.2;transcript_id=HG03009_ch_T0000242;gene_id=HG03009_ch_G0000086;Parent=HG03009_ch_T0000242;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=stop_codon:HG03009_ch_T0000242;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8991993	8992686	.	+	.	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.2,hg002_chrY_paternal_160.2;transcript_id=HG03009_ch_T0000242;gene_id=HG03009_ch_G0000086;Parent=HG03009_ch_T0000242;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=intron:HG03009_ch_T0000242:4;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8992687	8992897	.	+	.	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.2,hg002_chrY_paternal_160.2;transcript_id=HG03009_ch_T0000242;gene_id=HG03009_ch_G0000086;Parent=HG03009_ch_T0000242;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000242:5;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	8990083	8992897	10000	+	.	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.3,hg002_chrY_paternal_160.3;transcript_id=HG03009_ch_T0000243;gene_id=HG03009_ch_G0000086;Parent=HG03009_ch_G0000086;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=HG03009_ch_T0000243;Name=TSPY4
HG03009_chrY	CAT	exon	8990083	8990632	.	+	.	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.3,hg002_chrY_paternal_160.3;transcript_id=HG03009_ch_T0000243;gene_id=HG03009_ch_G0000086;Parent=HG03009_ch_T0000243;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000243:0;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	8990129	8990632	.	+	0	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.3,hg002_chrY_paternal_160.3;transcript_id=HG03009_ch_T0000243;gene_id=HG03009_ch_G0000086;Parent=HG03009_ch_T0000243;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:HG03009_ch_T0000243:0;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	8990129	8990131	.	+	0	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.3,hg002_chrY_paternal_160.3;transcript_id=HG03009_ch_T0000243;gene_id=HG03009_ch_G0000086;Parent=HG03009_ch_T0000243;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=start_codon:HG03009_ch_T0000243;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8990633	8991239	.	+	.	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.3,hg002_chrY_paternal_160.3;transcript_id=HG03009_ch_T0000243;gene_id=HG03009_ch_G0000086;Parent=HG03009_ch_T0000243;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=intron:HG03009_ch_T0000243:0;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8991240	8991317	.	+	.	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.3,hg002_chrY_paternal_160.3;transcript_id=HG03009_ch_T0000243;gene_id=HG03009_ch_G0000086;Parent=HG03009_ch_T0000243;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000243:1;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	8991240	8991317	.	+	0	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.3,hg002_chrY_paternal_160.3;transcript_id=HG03009_ch_T0000243;gene_id=HG03009_ch_G0000086;Parent=HG03009_ch_T0000243;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:HG03009_ch_T0000243:1;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8991318	8991445	.	+	.	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.3,hg002_chrY_paternal_160.3;transcript_id=HG03009_ch_T0000243;gene_id=HG03009_ch_G0000086;Parent=HG03009_ch_T0000243;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=intron:HG03009_ch_T0000243:1;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8991446	8991557	.	+	.	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.3,hg002_chrY_paternal_160.3;transcript_id=HG03009_ch_T0000243;gene_id=HG03009_ch_G0000086;Parent=HG03009_ch_T0000243;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000243:2;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	8991446	8991557	.	+	0	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.3,hg002_chrY_paternal_160.3;transcript_id=HG03009_ch_T0000243;gene_id=HG03009_ch_G0000086;Parent=HG03009_ch_T0000243;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:HG03009_ch_T0000243:2;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8991558	8991665	.	+	.	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.3,hg002_chrY_paternal_160.3;transcript_id=HG03009_ch_T0000243;gene_id=HG03009_ch_G0000086;Parent=HG03009_ch_T0000243;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=intron:HG03009_ch_T0000243:2;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8991666	8991804	.	+	.	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.3,hg002_chrY_paternal_160.3;transcript_id=HG03009_ch_T0000243;gene_id=HG03009_ch_G0000086;Parent=HG03009_ch_T0000243;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000243:3;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	8991666	8991804	.	+	2	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.3,hg002_chrY_paternal_160.3;transcript_id=HG03009_ch_T0000243;gene_id=HG03009_ch_G0000086;Parent=HG03009_ch_T0000243;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:HG03009_ch_T0000243:3;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8991805	8991910	.	+	.	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.3,hg002_chrY_paternal_160.3;transcript_id=HG03009_ch_T0000243;gene_id=HG03009_ch_G0000086;Parent=HG03009_ch_T0000243;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=intron:HG03009_ch_T0000243:3;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8991911	8991992	.	+	.	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.3,hg002_chrY_paternal_160.3;transcript_id=HG03009_ch_T0000243;gene_id=HG03009_ch_G0000086;Parent=HG03009_ch_T0000243;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000243:4;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	8991911	8991962	.	+	1	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.3,hg002_chrY_paternal_160.3;transcript_id=HG03009_ch_T0000243;gene_id=HG03009_ch_G0000086;Parent=HG03009_ch_T0000243;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:HG03009_ch_T0000243:4;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	8991960	8991962	.	+	0	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.3,hg002_chrY_paternal_160.3;transcript_id=HG03009_ch_T0000243;gene_id=HG03009_ch_G0000086;Parent=HG03009_ch_T0000243;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=stop_codon:HG03009_ch_T0000243;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8991993	8992686	.	+	.	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.3,hg002_chrY_paternal_160.3;transcript_id=HG03009_ch_T0000243;gene_id=HG03009_ch_G0000086;Parent=HG03009_ch_T0000243;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=intron:HG03009_ch_T0000243:4;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8992687	8992897	.	+	.	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.3,hg002_chrY_paternal_160.3;transcript_id=HG03009_ch_T0000243;gene_id=HG03009_ch_G0000086;Parent=HG03009_ch_T0000243;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000243:5;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	8990083	8992897	1000	+	.	source_transcript=hg002_chrY_paternal_216.4;source_transcript_name=hg002_chrY_paternal_216.1;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_216.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.4,hg002_chrY_paternal_160.4;transcript_id=HG03009_ch_T0000244;gene_id=HG03009_ch_G0000086;Parent=HG03009_ch_G0000086;transcript_name=hg002_chrY_paternal_216.1;gene_name=TSPY4;ID=HG03009_ch_T0000244;Name=TSPY4
HG03009_chrY	CAT	exon	8990083	8990632	.	+	.	source_transcript=hg002_chrY_paternal_216.4;source_transcript_name=hg002_chrY_paternal_216.1;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_216.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.4,hg002_chrY_paternal_160.4;transcript_id=HG03009_ch_T0000244;gene_id=HG03009_ch_G0000086;Parent=HG03009_ch_T0000244;transcript_name=hg002_chrY_paternal_216.1;gene_name=TSPY4;ID=exon:HG03009_ch_T0000244:0;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8990633	8991239	.	+	.	source_transcript=hg002_chrY_paternal_216.4;source_transcript_name=hg002_chrY_paternal_216.1;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_216.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.4,hg002_chrY_paternal_160.4;transcript_id=HG03009_ch_T0000244;gene_id=HG03009_ch_G0000086;Parent=HG03009_ch_T0000244;transcript_name=hg002_chrY_paternal_216.1;gene_name=TSPY4;ID=intron:HG03009_ch_T0000244:0;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8991240	8991317	.	+	.	source_transcript=hg002_chrY_paternal_216.4;source_transcript_name=hg002_chrY_paternal_216.1;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_216.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.4,hg002_chrY_paternal_160.4;transcript_id=HG03009_ch_T0000244;gene_id=HG03009_ch_G0000086;Parent=HG03009_ch_T0000244;transcript_name=hg002_chrY_paternal_216.1;gene_name=TSPY4;ID=exon:HG03009_ch_T0000244:1;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8991318	8991445	.	+	.	source_transcript=hg002_chrY_paternal_216.4;source_transcript_name=hg002_chrY_paternal_216.1;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_216.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.4,hg002_chrY_paternal_160.4;transcript_id=HG03009_ch_T0000244;gene_id=HG03009_ch_G0000086;Parent=HG03009_ch_T0000244;transcript_name=hg002_chrY_paternal_216.1;gene_name=TSPY4;ID=intron:HG03009_ch_T0000244:1;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8991446	8991557	.	+	.	source_transcript=hg002_chrY_paternal_216.4;source_transcript_name=hg002_chrY_paternal_216.1;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_216.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.4,hg002_chrY_paternal_160.4;transcript_id=HG03009_ch_T0000244;gene_id=HG03009_ch_G0000086;Parent=HG03009_ch_T0000244;transcript_name=hg002_chrY_paternal_216.1;gene_name=TSPY4;ID=exon:HG03009_ch_T0000244:2;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8991558	8991665	.	+	.	source_transcript=hg002_chrY_paternal_216.4;source_transcript_name=hg002_chrY_paternal_216.1;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_216.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.4,hg002_chrY_paternal_160.4;transcript_id=HG03009_ch_T0000244;gene_id=HG03009_ch_G0000086;Parent=HG03009_ch_T0000244;transcript_name=hg002_chrY_paternal_216.1;gene_name=TSPY4;ID=intron:HG03009_ch_T0000244:2;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8991666	8991804	.	+	.	source_transcript=hg002_chrY_paternal_216.4;source_transcript_name=hg002_chrY_paternal_216.1;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_216.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.4,hg002_chrY_paternal_160.4;transcript_id=HG03009_ch_T0000244;gene_id=HG03009_ch_G0000086;Parent=HG03009_ch_T0000244;transcript_name=hg002_chrY_paternal_216.1;gene_name=TSPY4;ID=exon:HG03009_ch_T0000244:3;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8991805	8991899	.	+	.	source_transcript=hg002_chrY_paternal_216.4;source_transcript_name=hg002_chrY_paternal_216.1;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_216.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.4,hg002_chrY_paternal_160.4;transcript_id=HG03009_ch_T0000244;gene_id=HG03009_ch_G0000086;Parent=HG03009_ch_T0000244;transcript_name=hg002_chrY_paternal_216.1;gene_name=TSPY4;ID=intron:HG03009_ch_T0000244:3;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8991900	8991992	.	+	.	source_transcript=hg002_chrY_paternal_216.4;source_transcript_name=hg002_chrY_paternal_216.1;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_216.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.4,hg002_chrY_paternal_160.4;transcript_id=HG03009_ch_T0000244;gene_id=HG03009_ch_G0000086;Parent=HG03009_ch_T0000244;transcript_name=hg002_chrY_paternal_216.1;gene_name=TSPY4;ID=exon:HG03009_ch_T0000244:4;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	8991993	8992686	.	+	.	source_transcript=hg002_chrY_paternal_216.4;source_transcript_name=hg002_chrY_paternal_216.1;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_216.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.4,hg002_chrY_paternal_160.4;transcript_id=HG03009_ch_T0000244;gene_id=HG03009_ch_G0000086;Parent=HG03009_ch_T0000244;transcript_name=hg002_chrY_paternal_216.1;gene_name=TSPY4;ID=intron:HG03009_ch_T0000244:4;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	8992687	8992897	.	+	.	source_transcript=hg002_chrY_paternal_216.4;source_transcript_name=hg002_chrY_paternal_216.1;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_216.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.4,hg002_chrY_paternal_160.4;transcript_id=HG03009_ch_T0000244;gene_id=HG03009_ch_G0000086;Parent=HG03009_ch_T0000244;transcript_name=hg002_chrY_paternal_216.1;gene_name=TSPY4;ID=exon:HG03009_ch_T0000244:5;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	9002179	9007783	.	-	.	source_gene_common_name=FAM197Y6;source_gene=hg002_chrY_paternal_217;alternative_source_transcripts=hg002_chrY_paternal_161.1,hg002_chrY_paternal_161.1;gene_id=HG03009_ch_G0000087;gene_biotype=lncRNA;gene_name=FAM197Y6;gene_sources=liftoff;ID=HG03009_ch_G0000087;Name=FAM197Y6
HG03009_chrY	CAT	transcript	9002179	9007783	1000	-	.	source_transcript=hg002_chrY_paternal_217.1;source_transcript_name=hg002_chrY_paternal_217.1;source_gene=hg002_chrY_paternal_217;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_217;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_217.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_217.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;alternative_source_transcripts=hg002_chrY_paternal_161.1,hg002_chrY_paternal_161.1;transcript_id=HG03009_ch_T0000245;gene_id=HG03009_ch_G0000087;Parent=HG03009_ch_G0000087;transcript_name=hg002_chrY_paternal_217.1;gene_name=FAM197Y6;ID=HG03009_ch_T0000245;Name=FAM197Y6
HG03009_chrY	CAT	exon	9002179	9002238	.	-	.	source_transcript=hg002_chrY_paternal_217.1;source_transcript_name=hg002_chrY_paternal_217.1;source_gene=hg002_chrY_paternal_217;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_217;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_217.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_217.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;alternative_source_transcripts=hg002_chrY_paternal_161.1,hg002_chrY_paternal_161.1;transcript_id=HG03009_ch_T0000245;gene_id=HG03009_ch_G0000087;Parent=HG03009_ch_T0000245;transcript_name=hg002_chrY_paternal_217.1;gene_name=FAM197Y6;ID=exon:HG03009_ch_T0000245:0;Name=FAM197Y6;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9002239	9005788	.	-	.	source_transcript=hg002_chrY_paternal_217.1;source_transcript_name=hg002_chrY_paternal_217.1;source_gene=hg002_chrY_paternal_217;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_217;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_217.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_217.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;alternative_source_transcripts=hg002_chrY_paternal_161.1,hg002_chrY_paternal_161.1;transcript_id=HG03009_ch_T0000245;gene_id=HG03009_ch_G0000087;Parent=HG03009_ch_T0000245;transcript_name=hg002_chrY_paternal_217.1;gene_name=FAM197Y6;ID=intron:HG03009_ch_T0000245:0;Name=FAM197Y6;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9005789	9005947	.	-	.	source_transcript=hg002_chrY_paternal_217.1;source_transcript_name=hg002_chrY_paternal_217.1;source_gene=hg002_chrY_paternal_217;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_217;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_217.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_217.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;alternative_source_transcripts=hg002_chrY_paternal_161.1,hg002_chrY_paternal_161.1;transcript_id=HG03009_ch_T0000245;gene_id=HG03009_ch_G0000087;Parent=HG03009_ch_T0000245;transcript_name=hg002_chrY_paternal_217.1;gene_name=FAM197Y6;ID=exon:HG03009_ch_T0000245:1;Name=FAM197Y6;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9005948	9007449	.	-	.	source_transcript=hg002_chrY_paternal_217.1;source_transcript_name=hg002_chrY_paternal_217.1;source_gene=hg002_chrY_paternal_217;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_217;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_217.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_217.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;alternative_source_transcripts=hg002_chrY_paternal_161.1,hg002_chrY_paternal_161.1;transcript_id=HG03009_ch_T0000245;gene_id=HG03009_ch_G0000087;Parent=HG03009_ch_T0000245;transcript_name=hg002_chrY_paternal_217.1;gene_name=FAM197Y6;ID=intron:HG03009_ch_T0000245:1;Name=FAM197Y6;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9007450	9007595	.	-	.	source_transcript=hg002_chrY_paternal_217.1;source_transcript_name=hg002_chrY_paternal_217.1;source_gene=hg002_chrY_paternal_217;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_217;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_217.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_217.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;alternative_source_transcripts=hg002_chrY_paternal_161.1,hg002_chrY_paternal_161.1;transcript_id=HG03009_ch_T0000245;gene_id=HG03009_ch_G0000087;Parent=HG03009_ch_T0000245;transcript_name=hg002_chrY_paternal_217.1;gene_name=FAM197Y6;ID=exon:HG03009_ch_T0000245:2;Name=FAM197Y6;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9007596	9007681	.	-	.	source_transcript=hg002_chrY_paternal_217.1;source_transcript_name=hg002_chrY_paternal_217.1;source_gene=hg002_chrY_paternal_217;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_217;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_217.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_217.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;alternative_source_transcripts=hg002_chrY_paternal_161.1,hg002_chrY_paternal_161.1;transcript_id=HG03009_ch_T0000245;gene_id=HG03009_ch_G0000087;Parent=HG03009_ch_T0000245;transcript_name=hg002_chrY_paternal_217.1;gene_name=FAM197Y6;ID=intron:HG03009_ch_T0000245:2;Name=FAM197Y6;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9007682	9007783	.	-	.	source_transcript=hg002_chrY_paternal_217.1;source_transcript_name=hg002_chrY_paternal_217.1;source_gene=hg002_chrY_paternal_217;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_217;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_217.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_217.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;alternative_source_transcripts=hg002_chrY_paternal_161.1,hg002_chrY_paternal_161.1;transcript_id=HG03009_ch_T0000245;gene_id=HG03009_ch_G0000087;Parent=HG03009_ch_T0000245;transcript_name=hg002_chrY_paternal_217.1;gene_name=FAM197Y6;ID=exon:HG03009_ch_T0000245:3;Name=FAM197Y6;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	9010396	9013210	.	+	.	source_gene_common_name=TSPY9;source_gene=hg002_chrY_paternal_162;alternative_source_transcripts=hg002_chrY_paternal_162.1,hg002_chrY_paternal_162.1;gene_id=HG03009_ch_G0000088;gene_biotype=protein_coding;gene_name=TSPY9;gene_sources=liftoff,augTM;ID=HG03009_ch_G0000088;Name=TSPY9
HG03009_chrY	CAT	transcript	9010396	9013210	100	+	.	source_transcript=hg002_chrY_paternal_162.1;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.1,hg002_chrY_paternal_162.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000246;gene_id=HG03009_ch_G0000088;Parent=HG03009_ch_G0000088;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=HG03009_ch_T0000246;Name=TSPY9
HG03009_chrY	CAT	exon	9010396	9010945	.	+	.	source_transcript=hg002_chrY_paternal_162.1;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.1,hg002_chrY_paternal_162.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000246;gene_id=HG03009_ch_G0000088;Parent=HG03009_ch_T0000246;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=exon:HG03009_ch_T0000246:0;Name=TSPY9;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9010442	9010945	.	+	0	source_transcript=hg002_chrY_paternal_162.1;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.1,hg002_chrY_paternal_162.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000246;gene_id=HG03009_ch_G0000088;Parent=HG03009_ch_T0000246;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=CDS:HG03009_ch_T0000246:0;Name=TSPY9;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	9010442	9010444	.	+	0	source_transcript=hg002_chrY_paternal_162.1;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.1,hg002_chrY_paternal_162.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000246;gene_id=HG03009_ch_G0000088;Parent=HG03009_ch_T0000246;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=start_codon:HG03009_ch_T0000246;Name=TSPY9;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9010946	9011552	.	+	.	source_transcript=hg002_chrY_paternal_162.1;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.1,hg002_chrY_paternal_162.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000246;gene_id=HG03009_ch_G0000088;Parent=HG03009_ch_T0000246;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=intron:HG03009_ch_T0000246:0;Name=TSPY9;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9011553	9011630	.	+	.	source_transcript=hg002_chrY_paternal_162.1;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.1,hg002_chrY_paternal_162.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000246;gene_id=HG03009_ch_G0000088;Parent=HG03009_ch_T0000246;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=exon:HG03009_ch_T0000246:1;Name=TSPY9;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9011553	9011630	.	+	0	source_transcript=hg002_chrY_paternal_162.1;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.1,hg002_chrY_paternal_162.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000246;gene_id=HG03009_ch_G0000088;Parent=HG03009_ch_T0000246;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=CDS:HG03009_ch_T0000246:1;Name=TSPY9;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9011631	9011758	.	+	.	source_transcript=hg002_chrY_paternal_162.1;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.1,hg002_chrY_paternal_162.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000246;gene_id=HG03009_ch_G0000088;Parent=HG03009_ch_T0000246;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=intron:HG03009_ch_T0000246:1;Name=TSPY9;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9011759	9011870	.	+	.	source_transcript=hg002_chrY_paternal_162.1;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.1,hg002_chrY_paternal_162.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000246;gene_id=HG03009_ch_G0000088;Parent=HG03009_ch_T0000246;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=exon:HG03009_ch_T0000246:2;Name=TSPY9;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9011759	9011870	.	+	0	source_transcript=hg002_chrY_paternal_162.1;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.1,hg002_chrY_paternal_162.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000246;gene_id=HG03009_ch_G0000088;Parent=HG03009_ch_T0000246;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=CDS:HG03009_ch_T0000246:2;Name=TSPY9;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9011871	9011971	.	+	.	source_transcript=hg002_chrY_paternal_162.1;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.1,hg002_chrY_paternal_162.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000246;gene_id=HG03009_ch_G0000088;Parent=HG03009_ch_T0000246;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=intron:HG03009_ch_T0000246:2;Name=TSPY9;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9011972	9012117	.	+	.	source_transcript=hg002_chrY_paternal_162.1;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.1,hg002_chrY_paternal_162.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000246;gene_id=HG03009_ch_G0000088;Parent=HG03009_ch_T0000246;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=exon:HG03009_ch_T0000246:3;Name=TSPY9;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9011972	9012117	.	+	2	source_transcript=hg002_chrY_paternal_162.1;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.1,hg002_chrY_paternal_162.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000246;gene_id=HG03009_ch_G0000088;Parent=HG03009_ch_T0000246;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=CDS:HG03009_ch_T0000246:3;Name=TSPY9;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9012118	9012223	.	+	.	source_transcript=hg002_chrY_paternal_162.1;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.1,hg002_chrY_paternal_162.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000246;gene_id=HG03009_ch_G0000088;Parent=HG03009_ch_T0000246;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=intron:HG03009_ch_T0000246:3;Name=TSPY9;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9012224	9012305	.	+	.	source_transcript=hg002_chrY_paternal_162.1;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.1,hg002_chrY_paternal_162.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000246;gene_id=HG03009_ch_G0000088;Parent=HG03009_ch_T0000246;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=exon:HG03009_ch_T0000246:4;Name=TSPY9;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9012224	9012305	.	+	0	source_transcript=hg002_chrY_paternal_162.1;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.1,hg002_chrY_paternal_162.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000246;gene_id=HG03009_ch_G0000088;Parent=HG03009_ch_T0000246;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=CDS:HG03009_ch_T0000246:4;Name=TSPY9;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9012306	9012999	.	+	.	source_transcript=hg002_chrY_paternal_162.1;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.1,hg002_chrY_paternal_162.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000246;gene_id=HG03009_ch_G0000088;Parent=HG03009_ch_T0000246;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=intron:HG03009_ch_T0000246:4;Name=TSPY9;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9013000	9013210	.	+	.	source_transcript=hg002_chrY_paternal_162.1;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.1,hg002_chrY_paternal_162.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000246;gene_id=HG03009_ch_G0000088;Parent=HG03009_ch_T0000246;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=exon:HG03009_ch_T0000246:5;Name=TSPY9;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9013000	9013022	.	+	2	source_transcript=hg002_chrY_paternal_162.1;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.1,hg002_chrY_paternal_162.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000246;gene_id=HG03009_ch_G0000088;Parent=HG03009_ch_T0000246;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=CDS:HG03009_ch_T0000246:5;Name=TSPY9;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	9013020	9013022	.	+	0	source_transcript=hg002_chrY_paternal_162.1;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.1,hg002_chrY_paternal_162.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000246;gene_id=HG03009_ch_G0000088;Parent=HG03009_ch_T0000246;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=stop_codon:HG03009_ch_T0000246;Name=TSPY9;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	9010396	9013210	100	+	.	source_transcript=hg002_chrY_paternal_162.2;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.2,hg002_chrY_paternal_162.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000247;gene_id=HG03009_ch_G0000088;Parent=HG03009_ch_G0000088;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=HG03009_ch_T0000247;Name=TSPY9
HG03009_chrY	CAT	exon	9010396	9010945	.	+	.	source_transcript=hg002_chrY_paternal_162.2;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.2,hg002_chrY_paternal_162.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000247;gene_id=HG03009_ch_G0000088;Parent=HG03009_ch_T0000247;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=exon:HG03009_ch_T0000247:0;Name=TSPY9;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9010442	9010945	.	+	0	source_transcript=hg002_chrY_paternal_162.2;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.2,hg002_chrY_paternal_162.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000247;gene_id=HG03009_ch_G0000088;Parent=HG03009_ch_T0000247;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=CDS:HG03009_ch_T0000247:0;Name=TSPY9;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	9010442	9010444	.	+	0	source_transcript=hg002_chrY_paternal_162.2;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.2,hg002_chrY_paternal_162.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000247;gene_id=HG03009_ch_G0000088;Parent=HG03009_ch_T0000247;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=start_codon:HG03009_ch_T0000247;Name=TSPY9;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9010946	9011552	.	+	.	source_transcript=hg002_chrY_paternal_162.2;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.2,hg002_chrY_paternal_162.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000247;gene_id=HG03009_ch_G0000088;Parent=HG03009_ch_T0000247;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=intron:HG03009_ch_T0000247:0;Name=TSPY9;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9011553	9011630	.	+	.	source_transcript=hg002_chrY_paternal_162.2;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.2,hg002_chrY_paternal_162.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000247;gene_id=HG03009_ch_G0000088;Parent=HG03009_ch_T0000247;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=exon:HG03009_ch_T0000247:1;Name=TSPY9;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9011553	9011630	.	+	0	source_transcript=hg002_chrY_paternal_162.2;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.2,hg002_chrY_paternal_162.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000247;gene_id=HG03009_ch_G0000088;Parent=HG03009_ch_T0000247;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=CDS:HG03009_ch_T0000247:1;Name=TSPY9;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9011631	9011758	.	+	.	source_transcript=hg002_chrY_paternal_162.2;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.2,hg002_chrY_paternal_162.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000247;gene_id=HG03009_ch_G0000088;Parent=HG03009_ch_T0000247;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=intron:HG03009_ch_T0000247:1;Name=TSPY9;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9011759	9011870	.	+	.	source_transcript=hg002_chrY_paternal_162.2;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.2,hg002_chrY_paternal_162.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000247;gene_id=HG03009_ch_G0000088;Parent=HG03009_ch_T0000247;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=exon:HG03009_ch_T0000247:2;Name=TSPY9;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9011759	9011870	.	+	0	source_transcript=hg002_chrY_paternal_162.2;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.2,hg002_chrY_paternal_162.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000247;gene_id=HG03009_ch_G0000088;Parent=HG03009_ch_T0000247;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=CDS:HG03009_ch_T0000247:2;Name=TSPY9;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9011871	9011971	.	+	.	source_transcript=hg002_chrY_paternal_162.2;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.2,hg002_chrY_paternal_162.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000247;gene_id=HG03009_ch_G0000088;Parent=HG03009_ch_T0000247;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=intron:HG03009_ch_T0000247:2;Name=TSPY9;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9011972	9012117	.	+	.	source_transcript=hg002_chrY_paternal_162.2;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.2,hg002_chrY_paternal_162.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000247;gene_id=HG03009_ch_G0000088;Parent=HG03009_ch_T0000247;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=exon:HG03009_ch_T0000247:3;Name=TSPY9;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9011972	9012117	.	+	2	source_transcript=hg002_chrY_paternal_162.2;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.2,hg002_chrY_paternal_162.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000247;gene_id=HG03009_ch_G0000088;Parent=HG03009_ch_T0000247;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=CDS:HG03009_ch_T0000247:3;Name=TSPY9;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9012118	9012212	.	+	.	source_transcript=hg002_chrY_paternal_162.2;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.2,hg002_chrY_paternal_162.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000247;gene_id=HG03009_ch_G0000088;Parent=HG03009_ch_T0000247;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=intron:HG03009_ch_T0000247:3;Name=TSPY9;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9012213	9012305	.	+	.	source_transcript=hg002_chrY_paternal_162.2;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.2,hg002_chrY_paternal_162.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000247;gene_id=HG03009_ch_G0000088;Parent=HG03009_ch_T0000247;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=exon:HG03009_ch_T0000247:4;Name=TSPY9;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9012213	9012275	.	+	0	source_transcript=hg002_chrY_paternal_162.2;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.2,hg002_chrY_paternal_162.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000247;gene_id=HG03009_ch_G0000088;Parent=HG03009_ch_T0000247;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=CDS:HG03009_ch_T0000247:4;Name=TSPY9;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	9012273	9012275	.	+	0	source_transcript=hg002_chrY_paternal_162.2;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.2,hg002_chrY_paternal_162.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000247;gene_id=HG03009_ch_G0000088;Parent=HG03009_ch_T0000247;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=stop_codon:HG03009_ch_T0000247;Name=TSPY9;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9012306	9012999	.	+	.	source_transcript=hg002_chrY_paternal_162.2;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.2,hg002_chrY_paternal_162.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000247;gene_id=HG03009_ch_G0000088;Parent=HG03009_ch_T0000247;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=intron:HG03009_ch_T0000247:4;Name=TSPY9;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9013000	9013210	.	+	.	source_transcript=hg002_chrY_paternal_162.2;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.2,hg002_chrY_paternal_162.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000247;gene_id=HG03009_ch_G0000088;Parent=HG03009_ch_T0000247;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=exon:HG03009_ch_T0000247:5;Name=TSPY9;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	9022473	9028159	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_163;alternative_source_transcripts=hg002_chrY_paternal_163.1,hg002_chrY_paternal_163.1;gene_id=HG03009_ch_G0000089;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=HG03009_ch_G0000089;Name=FAM197Y2
HG03009_chrY	CAT	transcript	9022473	9028159	1000	-	.	source_transcript=hg002_chrY_paternal_163.1;source_transcript_name=hg002_chrY_paternal_163.1;source_gene=hg002_chrY_paternal_163;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_163;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_163.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_163.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_163.1,hg002_chrY_paternal_163.1;transcript_id=HG03009_ch_T0000248;gene_id=HG03009_ch_G0000089;Parent=HG03009_ch_G0000089;transcript_name=hg002_chrY_paternal_163.1;gene_name=FAM197Y2;ID=HG03009_ch_T0000248;Name=FAM197Y2
HG03009_chrY	CAT	exon	9022473	9022532	.	-	.	source_transcript=hg002_chrY_paternal_163.1;source_transcript_name=hg002_chrY_paternal_163.1;source_gene=hg002_chrY_paternal_163;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_163;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_163.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_163.1,hg002_chrY_paternal_163.1;transcript_id=HG03009_ch_T0000248;gene_id=HG03009_ch_G0000089;Parent=HG03009_ch_T0000248;transcript_name=hg002_chrY_paternal_163.1;gene_name=FAM197Y2;ID=exon:HG03009_ch_T0000248:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9022533	9026081	.	-	.	source_transcript=hg002_chrY_paternal_163.1;source_transcript_name=hg002_chrY_paternal_163.1;source_gene=hg002_chrY_paternal_163;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_163;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_163.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_163.1,hg002_chrY_paternal_163.1;transcript_id=HG03009_ch_T0000248;gene_id=HG03009_ch_G0000089;Parent=HG03009_ch_T0000248;transcript_name=hg002_chrY_paternal_163.1;gene_name=FAM197Y2;ID=intron:HG03009_ch_T0000248:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9026082	9026240	.	-	.	source_transcript=hg002_chrY_paternal_163.1;source_transcript_name=hg002_chrY_paternal_163.1;source_gene=hg002_chrY_paternal_163;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_163;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_163.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_163.1,hg002_chrY_paternal_163.1;transcript_id=HG03009_ch_T0000248;gene_id=HG03009_ch_G0000089;Parent=HG03009_ch_T0000248;transcript_name=hg002_chrY_paternal_163.1;gene_name=FAM197Y2;ID=exon:HG03009_ch_T0000248:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9026241	9027736	.	-	.	source_transcript=hg002_chrY_paternal_163.1;source_transcript_name=hg002_chrY_paternal_163.1;source_gene=hg002_chrY_paternal_163;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_163;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_163.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_163.1,hg002_chrY_paternal_163.1;transcript_id=HG03009_ch_T0000248;gene_id=HG03009_ch_G0000089;Parent=HG03009_ch_T0000248;transcript_name=hg002_chrY_paternal_163.1;gene_name=FAM197Y2;ID=intron:HG03009_ch_T0000248:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9027737	9027882	.	-	.	source_transcript=hg002_chrY_paternal_163.1;source_transcript_name=hg002_chrY_paternal_163.1;source_gene=hg002_chrY_paternal_163;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_163;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_163.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_163.1,hg002_chrY_paternal_163.1;transcript_id=HG03009_ch_T0000248;gene_id=HG03009_ch_G0000089;Parent=HG03009_ch_T0000248;transcript_name=hg002_chrY_paternal_163.1;gene_name=FAM197Y2;ID=exon:HG03009_ch_T0000248:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9027883	9027968	.	-	.	source_transcript=hg002_chrY_paternal_163.1;source_transcript_name=hg002_chrY_paternal_163.1;source_gene=hg002_chrY_paternal_163;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_163;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_163.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_163.1,hg002_chrY_paternal_163.1;transcript_id=HG03009_ch_T0000248;gene_id=HG03009_ch_G0000089;Parent=HG03009_ch_T0000248;transcript_name=hg002_chrY_paternal_163.1;gene_name=FAM197Y2;ID=intron:HG03009_ch_T0000248:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9027969	9028159	.	-	.	source_transcript=hg002_chrY_paternal_163.1;source_transcript_name=hg002_chrY_paternal_163.1;source_gene=hg002_chrY_paternal_163;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_163;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_163.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_163.1,hg002_chrY_paternal_163.1;transcript_id=HG03009_ch_T0000248;gene_id=HG03009_ch_G0000089;Parent=HG03009_ch_T0000248;transcript_name=hg002_chrY_paternal_163.1;gene_name=FAM197Y2;ID=exon:HG03009_ch_T0000248:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	9030683	9033479	.	+	.	source_gene_common_name=TSPY10;source_gene=hg002_chrY_paternal_178;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_164.1;gene_id=HG03009_ch_G0000090;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff;ID=HG03009_ch_G0000090;Name=TSPY10
HG03009_chrY	CAT	transcript	9030683	9033479	100	+	.	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_164.1;transcript_id=HG03009_ch_T0000249;gene_id=HG03009_ch_G0000090;Parent=HG03009_ch_G0000090;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=HG03009_ch_T0000249;Name=TSPY10
HG03009_chrY	CAT	exon	9030683	9031214	.	+	.	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_164.1;transcript_id=HG03009_ch_T0000249;gene_id=HG03009_ch_G0000090;Parent=HG03009_ch_T0000249;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000249:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9030729	9031214	.	+	0	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_164.1;transcript_id=HG03009_ch_T0000249;gene_id=HG03009_ch_G0000090;Parent=HG03009_ch_T0000249;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000249:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	9030729	9030731	.	+	0	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_164.1;transcript_id=HG03009_ch_T0000249;gene_id=HG03009_ch_G0000090;Parent=HG03009_ch_T0000249;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=start_codon:HG03009_ch_T0000249;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9031215	9031821	.	+	.	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_164.1;transcript_id=HG03009_ch_T0000249;gene_id=HG03009_ch_G0000090;Parent=HG03009_ch_T0000249;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000249:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9031822	9031899	.	+	.	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_164.1;transcript_id=HG03009_ch_T0000249;gene_id=HG03009_ch_G0000090;Parent=HG03009_ch_T0000249;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000249:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9031822	9031899	.	+	0	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_164.1;transcript_id=HG03009_ch_T0000249;gene_id=HG03009_ch_G0000090;Parent=HG03009_ch_T0000249;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000249:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9031900	9032027	.	+	.	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_164.1;transcript_id=HG03009_ch_T0000249;gene_id=HG03009_ch_G0000090;Parent=HG03009_ch_T0000249;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000249:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9032028	9032139	.	+	.	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_164.1;transcript_id=HG03009_ch_T0000249;gene_id=HG03009_ch_G0000090;Parent=HG03009_ch_T0000249;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000249:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9032028	9032139	.	+	0	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_164.1;transcript_id=HG03009_ch_T0000249;gene_id=HG03009_ch_G0000090;Parent=HG03009_ch_T0000249;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000249:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9032140	9032240	.	+	.	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_164.1;transcript_id=HG03009_ch_T0000249;gene_id=HG03009_ch_G0000090;Parent=HG03009_ch_T0000249;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000249:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9032241	9032386	.	+	.	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_164.1;transcript_id=HG03009_ch_T0000249;gene_id=HG03009_ch_G0000090;Parent=HG03009_ch_T0000249;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000249:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9032241	9032386	.	+	2	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_164.1;transcript_id=HG03009_ch_T0000249;gene_id=HG03009_ch_G0000090;Parent=HG03009_ch_T0000249;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000249:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9032387	9032492	.	+	.	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_164.1;transcript_id=HG03009_ch_T0000249;gene_id=HG03009_ch_G0000090;Parent=HG03009_ch_T0000249;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000249:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9032493	9032574	.	+	.	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_164.1;transcript_id=HG03009_ch_T0000249;gene_id=HG03009_ch_G0000090;Parent=HG03009_ch_T0000249;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000249:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9032493	9032574	.	+	0	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_164.1;transcript_id=HG03009_ch_T0000249;gene_id=HG03009_ch_G0000090;Parent=HG03009_ch_T0000249;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000249:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9032575	9033268	.	+	.	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_164.1;transcript_id=HG03009_ch_T0000249;gene_id=HG03009_ch_G0000090;Parent=HG03009_ch_T0000249;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000249:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9033269	9033479	.	+	.	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_164.1;transcript_id=HG03009_ch_T0000249;gene_id=HG03009_ch_G0000090;Parent=HG03009_ch_T0000249;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000249:5;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9033269	9033291	.	+	2	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_164.1;transcript_id=HG03009_ch_T0000249;gene_id=HG03009_ch_G0000090;Parent=HG03009_ch_T0000249;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000249:5;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	9033289	9033291	.	+	0	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_164.1;transcript_id=HG03009_ch_T0000249;gene_id=HG03009_ch_G0000090;Parent=HG03009_ch_T0000249;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=stop_codon:HG03009_ch_T0000249;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	9030683	9033479	100	+	.	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_164.2;transcript_id=HG03009_ch_T0000250;gene_id=HG03009_ch_G0000090;Parent=HG03009_ch_G0000090;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=HG03009_ch_T0000250;Name=TSPY10
HG03009_chrY	CAT	exon	9030683	9031214	.	+	.	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_164.2;transcript_id=HG03009_ch_T0000250;gene_id=HG03009_ch_G0000090;Parent=HG03009_ch_T0000250;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000250:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9030729	9031214	.	+	0	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_164.2;transcript_id=HG03009_ch_T0000250;gene_id=HG03009_ch_G0000090;Parent=HG03009_ch_T0000250;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000250:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	9030729	9030731	.	+	0	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_164.2;transcript_id=HG03009_ch_T0000250;gene_id=HG03009_ch_G0000090;Parent=HG03009_ch_T0000250;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=start_codon:HG03009_ch_T0000250;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9031215	9031821	.	+	.	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_164.2;transcript_id=HG03009_ch_T0000250;gene_id=HG03009_ch_G0000090;Parent=HG03009_ch_T0000250;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000250:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9031822	9031899	.	+	.	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_164.2;transcript_id=HG03009_ch_T0000250;gene_id=HG03009_ch_G0000090;Parent=HG03009_ch_T0000250;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000250:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9031822	9031899	.	+	0	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_164.2;transcript_id=HG03009_ch_T0000250;gene_id=HG03009_ch_G0000090;Parent=HG03009_ch_T0000250;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000250:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9031900	9032027	.	+	.	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_164.2;transcript_id=HG03009_ch_T0000250;gene_id=HG03009_ch_G0000090;Parent=HG03009_ch_T0000250;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000250:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9032028	9032139	.	+	.	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_164.2;transcript_id=HG03009_ch_T0000250;gene_id=HG03009_ch_G0000090;Parent=HG03009_ch_T0000250;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000250:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9032028	9032139	.	+	0	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_164.2;transcript_id=HG03009_ch_T0000250;gene_id=HG03009_ch_G0000090;Parent=HG03009_ch_T0000250;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000250:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9032140	9032240	.	+	.	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_164.2;transcript_id=HG03009_ch_T0000250;gene_id=HG03009_ch_G0000090;Parent=HG03009_ch_T0000250;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000250:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9032241	9032386	.	+	.	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_164.2;transcript_id=HG03009_ch_T0000250;gene_id=HG03009_ch_G0000090;Parent=HG03009_ch_T0000250;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000250:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9032241	9032386	.	+	2	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_164.2;transcript_id=HG03009_ch_T0000250;gene_id=HG03009_ch_G0000090;Parent=HG03009_ch_T0000250;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000250:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9032387	9032481	.	+	.	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_164.2;transcript_id=HG03009_ch_T0000250;gene_id=HG03009_ch_G0000090;Parent=HG03009_ch_T0000250;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000250:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9032482	9032574	.	+	.	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_164.2;transcript_id=HG03009_ch_T0000250;gene_id=HG03009_ch_G0000090;Parent=HG03009_ch_T0000250;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000250:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9032482	9032544	.	+	0	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_164.2;transcript_id=HG03009_ch_T0000250;gene_id=HG03009_ch_G0000090;Parent=HG03009_ch_T0000250;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000250:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	9032542	9032544	.	+	0	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_164.2;transcript_id=HG03009_ch_T0000250;gene_id=HG03009_ch_G0000090;Parent=HG03009_ch_T0000250;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=stop_codon:HG03009_ch_T0000250;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9032575	9033268	.	+	.	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_164.2;transcript_id=HG03009_ch_T0000250;gene_id=HG03009_ch_G0000090;Parent=HG03009_ch_T0000250;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000250:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9033269	9033479	.	+	.	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_164.2;transcript_id=HG03009_ch_T0000250;gene_id=HG03009_ch_G0000090;Parent=HG03009_ch_T0000250;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000250:5;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	9030683	9033479	100	+	.	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_164.3;transcript_id=HG03009_ch_T0000251;gene_id=HG03009_ch_G0000090;Parent=HG03009_ch_G0000090;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=HG03009_ch_T0000251;Name=TSPY10
HG03009_chrY	CAT	exon	9030683	9031214	.	+	.	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_164.3;transcript_id=HG03009_ch_T0000251;gene_id=HG03009_ch_G0000090;Parent=HG03009_ch_T0000251;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000251:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9030729	9031214	.	+	0	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_164.3;transcript_id=HG03009_ch_T0000251;gene_id=HG03009_ch_G0000090;Parent=HG03009_ch_T0000251;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000251:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	9030729	9030731	.	+	0	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_164.3;transcript_id=HG03009_ch_T0000251;gene_id=HG03009_ch_G0000090;Parent=HG03009_ch_T0000251;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=start_codon:HG03009_ch_T0000251;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9031215	9031821	.	+	.	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_164.3;transcript_id=HG03009_ch_T0000251;gene_id=HG03009_ch_G0000090;Parent=HG03009_ch_T0000251;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000251:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9031822	9031899	.	+	.	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_164.3;transcript_id=HG03009_ch_T0000251;gene_id=HG03009_ch_G0000090;Parent=HG03009_ch_T0000251;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000251:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9031822	9031899	.	+	0	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_164.3;transcript_id=HG03009_ch_T0000251;gene_id=HG03009_ch_G0000090;Parent=HG03009_ch_T0000251;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000251:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9031900	9032027	.	+	.	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_164.3;transcript_id=HG03009_ch_T0000251;gene_id=HG03009_ch_G0000090;Parent=HG03009_ch_T0000251;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000251:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9032028	9032139	.	+	.	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_164.3;transcript_id=HG03009_ch_T0000251;gene_id=HG03009_ch_G0000090;Parent=HG03009_ch_T0000251;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000251:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9032028	9032139	.	+	0	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_164.3;transcript_id=HG03009_ch_T0000251;gene_id=HG03009_ch_G0000090;Parent=HG03009_ch_T0000251;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000251:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9032140	9032247	.	+	.	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_164.3;transcript_id=HG03009_ch_T0000251;gene_id=HG03009_ch_G0000090;Parent=HG03009_ch_T0000251;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000251:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9032248	9032386	.	+	.	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_164.3;transcript_id=HG03009_ch_T0000251;gene_id=HG03009_ch_G0000090;Parent=HG03009_ch_T0000251;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000251:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9032248	9032386	.	+	2	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_164.3;transcript_id=HG03009_ch_T0000251;gene_id=HG03009_ch_G0000090;Parent=HG03009_ch_T0000251;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000251:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9032387	9032492	.	+	.	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_164.3;transcript_id=HG03009_ch_T0000251;gene_id=HG03009_ch_G0000090;Parent=HG03009_ch_T0000251;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000251:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9032493	9032574	.	+	.	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_164.3;transcript_id=HG03009_ch_T0000251;gene_id=HG03009_ch_G0000090;Parent=HG03009_ch_T0000251;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000251:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9032493	9032544	.	+	1	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_164.3;transcript_id=HG03009_ch_T0000251;gene_id=HG03009_ch_G0000090;Parent=HG03009_ch_T0000251;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000251:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	9032542	9032544	.	+	0	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_164.3;transcript_id=HG03009_ch_T0000251;gene_id=HG03009_ch_G0000090;Parent=HG03009_ch_T0000251;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=stop_codon:HG03009_ch_T0000251;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9032575	9033268	.	+	.	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_164.3;transcript_id=HG03009_ch_T0000251;gene_id=HG03009_ch_G0000090;Parent=HG03009_ch_T0000251;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000251:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9033269	9033479	.	+	.	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_164.3;transcript_id=HG03009_ch_T0000251;gene_id=HG03009_ch_G0000090;Parent=HG03009_ch_T0000251;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000251:5;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	9030683	9033479	1000	+	.	source_transcript=hg002_chrY_paternal_178.4;source_transcript_name=hg002_chrY_paternal_178.1;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_178.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.4,hg002_chrY_paternal_164.4;transcript_id=HG03009_ch_T0000252;gene_id=HG03009_ch_G0000090;Parent=HG03009_ch_G0000090;transcript_name=hg002_chrY_paternal_178.1;gene_name=TSPY10;ID=HG03009_ch_T0000252;Name=TSPY10
HG03009_chrY	CAT	exon	9030683	9031214	.	+	.	source_transcript=hg002_chrY_paternal_178.4;source_transcript_name=hg002_chrY_paternal_178.1;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_178.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.4,hg002_chrY_paternal_164.4;transcript_id=HG03009_ch_T0000252;gene_id=HG03009_ch_G0000090;Parent=HG03009_ch_T0000252;transcript_name=hg002_chrY_paternal_178.1;gene_name=TSPY10;ID=exon:HG03009_ch_T0000252:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9031215	9031821	.	+	.	source_transcript=hg002_chrY_paternal_178.4;source_transcript_name=hg002_chrY_paternal_178.1;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_178.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.4,hg002_chrY_paternal_164.4;transcript_id=HG03009_ch_T0000252;gene_id=HG03009_ch_G0000090;Parent=HG03009_ch_T0000252;transcript_name=hg002_chrY_paternal_178.1;gene_name=TSPY10;ID=intron:HG03009_ch_T0000252:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9031822	9031899	.	+	.	source_transcript=hg002_chrY_paternal_178.4;source_transcript_name=hg002_chrY_paternal_178.1;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_178.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.4,hg002_chrY_paternal_164.4;transcript_id=HG03009_ch_T0000252;gene_id=HG03009_ch_G0000090;Parent=HG03009_ch_T0000252;transcript_name=hg002_chrY_paternal_178.1;gene_name=TSPY10;ID=exon:HG03009_ch_T0000252:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9031900	9032027	.	+	.	source_transcript=hg002_chrY_paternal_178.4;source_transcript_name=hg002_chrY_paternal_178.1;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_178.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.4,hg002_chrY_paternal_164.4;transcript_id=HG03009_ch_T0000252;gene_id=HG03009_ch_G0000090;Parent=HG03009_ch_T0000252;transcript_name=hg002_chrY_paternal_178.1;gene_name=TSPY10;ID=intron:HG03009_ch_T0000252:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9032028	9032139	.	+	.	source_transcript=hg002_chrY_paternal_178.4;source_transcript_name=hg002_chrY_paternal_178.1;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_178.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.4,hg002_chrY_paternal_164.4;transcript_id=HG03009_ch_T0000252;gene_id=HG03009_ch_G0000090;Parent=HG03009_ch_T0000252;transcript_name=hg002_chrY_paternal_178.1;gene_name=TSPY10;ID=exon:HG03009_ch_T0000252:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9032140	9032247	.	+	.	source_transcript=hg002_chrY_paternal_178.4;source_transcript_name=hg002_chrY_paternal_178.1;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_178.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.4,hg002_chrY_paternal_164.4;transcript_id=HG03009_ch_T0000252;gene_id=HG03009_ch_G0000090;Parent=HG03009_ch_T0000252;transcript_name=hg002_chrY_paternal_178.1;gene_name=TSPY10;ID=intron:HG03009_ch_T0000252:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9032248	9032386	.	+	.	source_transcript=hg002_chrY_paternal_178.4;source_transcript_name=hg002_chrY_paternal_178.1;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_178.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.4,hg002_chrY_paternal_164.4;transcript_id=HG03009_ch_T0000252;gene_id=HG03009_ch_G0000090;Parent=HG03009_ch_T0000252;transcript_name=hg002_chrY_paternal_178.1;gene_name=TSPY10;ID=exon:HG03009_ch_T0000252:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9032387	9032481	.	+	.	source_transcript=hg002_chrY_paternal_178.4;source_transcript_name=hg002_chrY_paternal_178.1;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_178.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.4,hg002_chrY_paternal_164.4;transcript_id=HG03009_ch_T0000252;gene_id=HG03009_ch_G0000090;Parent=HG03009_ch_T0000252;transcript_name=hg002_chrY_paternal_178.1;gene_name=TSPY10;ID=intron:HG03009_ch_T0000252:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9032482	9032574	.	+	.	source_transcript=hg002_chrY_paternal_178.4;source_transcript_name=hg002_chrY_paternal_178.1;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_178.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.4,hg002_chrY_paternal_164.4;transcript_id=HG03009_ch_T0000252;gene_id=HG03009_ch_G0000090;Parent=HG03009_ch_T0000252;transcript_name=hg002_chrY_paternal_178.1;gene_name=TSPY10;ID=exon:HG03009_ch_T0000252:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9032575	9033268	.	+	.	source_transcript=hg002_chrY_paternal_178.4;source_transcript_name=hg002_chrY_paternal_178.1;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_178.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.4,hg002_chrY_paternal_164.4;transcript_id=HG03009_ch_T0000252;gene_id=HG03009_ch_G0000090;Parent=HG03009_ch_T0000252;transcript_name=hg002_chrY_paternal_178.1;gene_name=TSPY10;ID=intron:HG03009_ch_T0000252:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9033269	9033479	.	+	.	source_transcript=hg002_chrY_paternal_178.4;source_transcript_name=hg002_chrY_paternal_178.1;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_178.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.4,hg002_chrY_paternal_164.4;transcript_id=HG03009_ch_T0000252;gene_id=HG03009_ch_G0000090;Parent=HG03009_ch_T0000252;transcript_name=hg002_chrY_paternal_178.1;gene_name=TSPY10;ID=exon:HG03009_ch_T0000252:5;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	9042744	9048349	.	-	.	source_gene_common_name=FAM197Y3;source_gene=hg002_chrY_paternal_167;alternative_source_transcripts=hg002_chrY_paternal_167.1,hg002_chrY_paternal_167.1;gene_id=HG03009_ch_G0000091;gene_biotype=lncRNA;gene_name=FAM197Y3;gene_sources=liftoff;ID=HG03009_ch_G0000091;Name=FAM197Y3
HG03009_chrY	CAT	transcript	9042744	9048349	1000	-	.	source_transcript=hg002_chrY_paternal_167.1;source_transcript_name=hg002_chrY_paternal_167.1;source_gene=hg002_chrY_paternal_167;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_167;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_167.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_167.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_167.1,hg002_chrY_paternal_167.1;transcript_id=HG03009_ch_T0000253;gene_id=HG03009_ch_G0000091;Parent=HG03009_ch_G0000091;transcript_name=hg002_chrY_paternal_167.1;gene_name=FAM197Y3;ID=HG03009_ch_T0000253;Name=FAM197Y3
HG03009_chrY	CAT	exon	9042744	9042803	.	-	.	source_transcript=hg002_chrY_paternal_167.1;source_transcript_name=hg002_chrY_paternal_167.1;source_gene=hg002_chrY_paternal_167;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_167;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_167.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_167.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_167.1,hg002_chrY_paternal_167.1;transcript_id=HG03009_ch_T0000253;gene_id=HG03009_ch_G0000091;Parent=HG03009_ch_T0000253;transcript_name=hg002_chrY_paternal_167.1;gene_name=FAM197Y3;ID=exon:HG03009_ch_T0000253:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9042804	9046354	.	-	.	source_transcript=hg002_chrY_paternal_167.1;source_transcript_name=hg002_chrY_paternal_167.1;source_gene=hg002_chrY_paternal_167;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_167;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_167.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_167.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_167.1,hg002_chrY_paternal_167.1;transcript_id=HG03009_ch_T0000253;gene_id=HG03009_ch_G0000091;Parent=HG03009_ch_T0000253;transcript_name=hg002_chrY_paternal_167.1;gene_name=FAM197Y3;ID=intron:HG03009_ch_T0000253:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9046355	9046513	.	-	.	source_transcript=hg002_chrY_paternal_167.1;source_transcript_name=hg002_chrY_paternal_167.1;source_gene=hg002_chrY_paternal_167;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_167;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_167.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_167.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_167.1,hg002_chrY_paternal_167.1;transcript_id=HG03009_ch_T0000253;gene_id=HG03009_ch_G0000091;Parent=HG03009_ch_T0000253;transcript_name=hg002_chrY_paternal_167.1;gene_name=FAM197Y3;ID=exon:HG03009_ch_T0000253:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9046514	9048015	.	-	.	source_transcript=hg002_chrY_paternal_167.1;source_transcript_name=hg002_chrY_paternal_167.1;source_gene=hg002_chrY_paternal_167;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_167;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_167.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_167.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_167.1,hg002_chrY_paternal_167.1;transcript_id=HG03009_ch_T0000253;gene_id=HG03009_ch_G0000091;Parent=HG03009_ch_T0000253;transcript_name=hg002_chrY_paternal_167.1;gene_name=FAM197Y3;ID=intron:HG03009_ch_T0000253:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9048016	9048161	.	-	.	source_transcript=hg002_chrY_paternal_167.1;source_transcript_name=hg002_chrY_paternal_167.1;source_gene=hg002_chrY_paternal_167;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_167;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_167.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_167.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_167.1,hg002_chrY_paternal_167.1;transcript_id=HG03009_ch_T0000253;gene_id=HG03009_ch_G0000091;Parent=HG03009_ch_T0000253;transcript_name=hg002_chrY_paternal_167.1;gene_name=FAM197Y3;ID=exon:HG03009_ch_T0000253:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9048162	9048247	.	-	.	source_transcript=hg002_chrY_paternal_167.1;source_transcript_name=hg002_chrY_paternal_167.1;source_gene=hg002_chrY_paternal_167;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_167;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_167.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_167.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_167.1,hg002_chrY_paternal_167.1;transcript_id=HG03009_ch_T0000253;gene_id=HG03009_ch_G0000091;Parent=HG03009_ch_T0000253;transcript_name=hg002_chrY_paternal_167.1;gene_name=FAM197Y3;ID=intron:HG03009_ch_T0000253:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9048248	9048349	.	-	.	source_transcript=hg002_chrY_paternal_167.1;source_transcript_name=hg002_chrY_paternal_167.1;source_gene=hg002_chrY_paternal_167;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_167;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_167.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_167.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_167.1,hg002_chrY_paternal_167.1;transcript_id=HG03009_ch_T0000253;gene_id=HG03009_ch_G0000091;Parent=HG03009_ch_T0000253;transcript_name=hg002_chrY_paternal_167.1;gene_name=FAM197Y3;ID=exon:HG03009_ch_T0000253:3;Name=FAM197Y3;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	9050962	9053758	.	+	.	source_gene_common_name=TSPY10;source_gene=hg002_chrY_paternal_168;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_168.1;gene_id=HG03009_ch_G0000092;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff,augTM;ID=HG03009_ch_G0000092;Name=TSPY10
HG03009_chrY	CAT	transcript	9050962	9053758	100	+	.	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_168.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000254;gene_id=HG03009_ch_G0000092;Parent=HG03009_ch_G0000092;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=HG03009_ch_T0000254;Name=TSPY10
HG03009_chrY	CAT	exon	9050962	9051493	.	+	.	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_168.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000254;gene_id=HG03009_ch_G0000092;Parent=HG03009_ch_T0000254;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000254:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9051008	9051493	.	+	0	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_168.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000254;gene_id=HG03009_ch_G0000092;Parent=HG03009_ch_T0000254;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000254:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	9051008	9051010	.	+	0	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_168.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000254;gene_id=HG03009_ch_G0000092;Parent=HG03009_ch_T0000254;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=start_codon:HG03009_ch_T0000254;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9051494	9052100	.	+	.	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_168.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000254;gene_id=HG03009_ch_G0000092;Parent=HG03009_ch_T0000254;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000254:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9052101	9052178	.	+	.	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_168.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000254;gene_id=HG03009_ch_G0000092;Parent=HG03009_ch_T0000254;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000254:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9052101	9052178	.	+	0	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_168.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000254;gene_id=HG03009_ch_G0000092;Parent=HG03009_ch_T0000254;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000254:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9052179	9052306	.	+	.	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_168.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000254;gene_id=HG03009_ch_G0000092;Parent=HG03009_ch_T0000254;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000254:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9052307	9052418	.	+	.	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_168.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000254;gene_id=HG03009_ch_G0000092;Parent=HG03009_ch_T0000254;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000254:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9052307	9052418	.	+	0	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_168.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000254;gene_id=HG03009_ch_G0000092;Parent=HG03009_ch_T0000254;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000254:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9052419	9052519	.	+	.	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_168.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000254;gene_id=HG03009_ch_G0000092;Parent=HG03009_ch_T0000254;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000254:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9052520	9052665	.	+	.	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_168.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000254;gene_id=HG03009_ch_G0000092;Parent=HG03009_ch_T0000254;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000254:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9052520	9052665	.	+	2	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_168.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000254;gene_id=HG03009_ch_G0000092;Parent=HG03009_ch_T0000254;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000254:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9052666	9052771	.	+	.	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_168.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000254;gene_id=HG03009_ch_G0000092;Parent=HG03009_ch_T0000254;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000254:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9052772	9052853	.	+	.	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_168.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000254;gene_id=HG03009_ch_G0000092;Parent=HG03009_ch_T0000254;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000254:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9052772	9052853	.	+	0	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_168.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000254;gene_id=HG03009_ch_G0000092;Parent=HG03009_ch_T0000254;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000254:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9052854	9053547	.	+	.	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_168.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000254;gene_id=HG03009_ch_G0000092;Parent=HG03009_ch_T0000254;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000254:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9053548	9053758	.	+	.	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_168.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000254;gene_id=HG03009_ch_G0000092;Parent=HG03009_ch_T0000254;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000254:5;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9053548	9053570	.	+	2	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_168.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000254;gene_id=HG03009_ch_G0000092;Parent=HG03009_ch_T0000254;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000254:5;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	9053568	9053570	.	+	0	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_168.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000254;gene_id=HG03009_ch_G0000092;Parent=HG03009_ch_T0000254;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=stop_codon:HG03009_ch_T0000254;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	9050962	9053758	100	+	.	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_168.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000255;gene_id=HG03009_ch_G0000092;Parent=HG03009_ch_G0000092;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=HG03009_ch_T0000255;Name=TSPY10
HG03009_chrY	CAT	exon	9050962	9051493	.	+	.	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_168.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000255;gene_id=HG03009_ch_G0000092;Parent=HG03009_ch_T0000255;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000255:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9051008	9051493	.	+	0	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_168.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000255;gene_id=HG03009_ch_G0000092;Parent=HG03009_ch_T0000255;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000255:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	9051008	9051010	.	+	0	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_168.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000255;gene_id=HG03009_ch_G0000092;Parent=HG03009_ch_T0000255;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=start_codon:HG03009_ch_T0000255;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9051494	9052100	.	+	.	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_168.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000255;gene_id=HG03009_ch_G0000092;Parent=HG03009_ch_T0000255;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000255:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9052101	9052178	.	+	.	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_168.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000255;gene_id=HG03009_ch_G0000092;Parent=HG03009_ch_T0000255;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000255:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9052101	9052178	.	+	0	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_168.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000255;gene_id=HG03009_ch_G0000092;Parent=HG03009_ch_T0000255;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000255:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9052179	9052306	.	+	.	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_168.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000255;gene_id=HG03009_ch_G0000092;Parent=HG03009_ch_T0000255;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000255:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9052307	9052418	.	+	.	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_168.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000255;gene_id=HG03009_ch_G0000092;Parent=HG03009_ch_T0000255;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000255:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9052307	9052418	.	+	0	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_168.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000255;gene_id=HG03009_ch_G0000092;Parent=HG03009_ch_T0000255;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000255:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9052419	9052519	.	+	.	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_168.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000255;gene_id=HG03009_ch_G0000092;Parent=HG03009_ch_T0000255;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000255:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9052520	9052665	.	+	.	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_168.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000255;gene_id=HG03009_ch_G0000092;Parent=HG03009_ch_T0000255;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000255:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9052520	9052665	.	+	2	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_168.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000255;gene_id=HG03009_ch_G0000092;Parent=HG03009_ch_T0000255;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000255:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9052666	9052760	.	+	.	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_168.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000255;gene_id=HG03009_ch_G0000092;Parent=HG03009_ch_T0000255;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000255:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9052761	9052853	.	+	.	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_168.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000255;gene_id=HG03009_ch_G0000092;Parent=HG03009_ch_T0000255;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000255:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9052761	9052823	.	+	0	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_168.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000255;gene_id=HG03009_ch_G0000092;Parent=HG03009_ch_T0000255;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000255:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	9052821	9052823	.	+	0	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_168.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000255;gene_id=HG03009_ch_G0000092;Parent=HG03009_ch_T0000255;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=stop_codon:HG03009_ch_T0000255;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9052854	9053547	.	+	.	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_168.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000255;gene_id=HG03009_ch_G0000092;Parent=HG03009_ch_T0000255;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000255:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9053548	9053758	.	+	.	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_168.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000255;gene_id=HG03009_ch_G0000092;Parent=HG03009_ch_T0000255;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000255:5;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	9050962	9053758	100	+	.	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_168.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000256;gene_id=HG03009_ch_G0000092;Parent=HG03009_ch_G0000092;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=HG03009_ch_T0000256;Name=TSPY10
HG03009_chrY	CAT	exon	9050962	9051493	.	+	.	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_168.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000256;gene_id=HG03009_ch_G0000092;Parent=HG03009_ch_T0000256;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000256:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9051008	9051493	.	+	0	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_168.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000256;gene_id=HG03009_ch_G0000092;Parent=HG03009_ch_T0000256;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000256:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	9051008	9051010	.	+	0	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_168.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000256;gene_id=HG03009_ch_G0000092;Parent=HG03009_ch_T0000256;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=start_codon:HG03009_ch_T0000256;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9051494	9052100	.	+	.	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_168.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000256;gene_id=HG03009_ch_G0000092;Parent=HG03009_ch_T0000256;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000256:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9052101	9052178	.	+	.	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_168.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000256;gene_id=HG03009_ch_G0000092;Parent=HG03009_ch_T0000256;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000256:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9052101	9052178	.	+	0	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_168.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000256;gene_id=HG03009_ch_G0000092;Parent=HG03009_ch_T0000256;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000256:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9052179	9052306	.	+	.	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_168.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000256;gene_id=HG03009_ch_G0000092;Parent=HG03009_ch_T0000256;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000256:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9052307	9052418	.	+	.	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_168.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000256;gene_id=HG03009_ch_G0000092;Parent=HG03009_ch_T0000256;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000256:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9052307	9052418	.	+	0	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_168.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000256;gene_id=HG03009_ch_G0000092;Parent=HG03009_ch_T0000256;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000256:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9052419	9052526	.	+	.	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_168.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000256;gene_id=HG03009_ch_G0000092;Parent=HG03009_ch_T0000256;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000256:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9052527	9052665	.	+	.	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_168.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000256;gene_id=HG03009_ch_G0000092;Parent=HG03009_ch_T0000256;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000256:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9052527	9052665	.	+	2	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_168.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000256;gene_id=HG03009_ch_G0000092;Parent=HG03009_ch_T0000256;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000256:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9052666	9052771	.	+	.	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_168.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000256;gene_id=HG03009_ch_G0000092;Parent=HG03009_ch_T0000256;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000256:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9052772	9052853	.	+	.	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_168.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000256;gene_id=HG03009_ch_G0000092;Parent=HG03009_ch_T0000256;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000256:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9052772	9052823	.	+	1	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_168.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000256;gene_id=HG03009_ch_G0000092;Parent=HG03009_ch_T0000256;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000256:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	9052821	9052823	.	+	0	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_168.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000256;gene_id=HG03009_ch_G0000092;Parent=HG03009_ch_T0000256;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=stop_codon:HG03009_ch_T0000256;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9052854	9053547	.	+	.	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_168.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000256;gene_id=HG03009_ch_G0000092;Parent=HG03009_ch_T0000256;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000256:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9053548	9053758	.	+	.	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_168.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000256;gene_id=HG03009_ch_G0000092;Parent=HG03009_ch_T0000256;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000256:5;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	9050962	9053758	1000	+	.	source_transcript=hg002_chrY_paternal_168.4;source_transcript_name=hg002_chrY_paternal_168.1;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_168.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.4,hg002_chrY_paternal_168.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000257;gene_id=HG03009_ch_G0000092;Parent=HG03009_ch_G0000092;transcript_name=hg002_chrY_paternal_168.1;gene_name=TSPY10;ID=HG03009_ch_T0000257;Name=TSPY10
HG03009_chrY	CAT	exon	9050962	9051493	.	+	.	source_transcript=hg002_chrY_paternal_168.4;source_transcript_name=hg002_chrY_paternal_168.1;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_168.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.4,hg002_chrY_paternal_168.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000257;gene_id=HG03009_ch_G0000092;Parent=HG03009_ch_T0000257;transcript_name=hg002_chrY_paternal_168.1;gene_name=TSPY10;ID=exon:HG03009_ch_T0000257:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9051494	9052100	.	+	.	source_transcript=hg002_chrY_paternal_168.4;source_transcript_name=hg002_chrY_paternal_168.1;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_168.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.4,hg002_chrY_paternal_168.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000257;gene_id=HG03009_ch_G0000092;Parent=HG03009_ch_T0000257;transcript_name=hg002_chrY_paternal_168.1;gene_name=TSPY10;ID=intron:HG03009_ch_T0000257:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9052101	9052178	.	+	.	source_transcript=hg002_chrY_paternal_168.4;source_transcript_name=hg002_chrY_paternal_168.1;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_168.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.4,hg002_chrY_paternal_168.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000257;gene_id=HG03009_ch_G0000092;Parent=HG03009_ch_T0000257;transcript_name=hg002_chrY_paternal_168.1;gene_name=TSPY10;ID=exon:HG03009_ch_T0000257:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9052179	9052306	.	+	.	source_transcript=hg002_chrY_paternal_168.4;source_transcript_name=hg002_chrY_paternal_168.1;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_168.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.4,hg002_chrY_paternal_168.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000257;gene_id=HG03009_ch_G0000092;Parent=HG03009_ch_T0000257;transcript_name=hg002_chrY_paternal_168.1;gene_name=TSPY10;ID=intron:HG03009_ch_T0000257:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9052307	9052418	.	+	.	source_transcript=hg002_chrY_paternal_168.4;source_transcript_name=hg002_chrY_paternal_168.1;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_168.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.4,hg002_chrY_paternal_168.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000257;gene_id=HG03009_ch_G0000092;Parent=HG03009_ch_T0000257;transcript_name=hg002_chrY_paternal_168.1;gene_name=TSPY10;ID=exon:HG03009_ch_T0000257:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9052419	9052526	.	+	.	source_transcript=hg002_chrY_paternal_168.4;source_transcript_name=hg002_chrY_paternal_168.1;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_168.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.4,hg002_chrY_paternal_168.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000257;gene_id=HG03009_ch_G0000092;Parent=HG03009_ch_T0000257;transcript_name=hg002_chrY_paternal_168.1;gene_name=TSPY10;ID=intron:HG03009_ch_T0000257:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9052527	9052665	.	+	.	source_transcript=hg002_chrY_paternal_168.4;source_transcript_name=hg002_chrY_paternal_168.1;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_168.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.4,hg002_chrY_paternal_168.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000257;gene_id=HG03009_ch_G0000092;Parent=HG03009_ch_T0000257;transcript_name=hg002_chrY_paternal_168.1;gene_name=TSPY10;ID=exon:HG03009_ch_T0000257:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9052666	9052760	.	+	.	source_transcript=hg002_chrY_paternal_168.4;source_transcript_name=hg002_chrY_paternal_168.1;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_168.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.4,hg002_chrY_paternal_168.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000257;gene_id=HG03009_ch_G0000092;Parent=HG03009_ch_T0000257;transcript_name=hg002_chrY_paternal_168.1;gene_name=TSPY10;ID=intron:HG03009_ch_T0000257:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9052761	9052853	.	+	.	source_transcript=hg002_chrY_paternal_168.4;source_transcript_name=hg002_chrY_paternal_168.1;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_168.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.4,hg002_chrY_paternal_168.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000257;gene_id=HG03009_ch_G0000092;Parent=HG03009_ch_T0000257;transcript_name=hg002_chrY_paternal_168.1;gene_name=TSPY10;ID=exon:HG03009_ch_T0000257:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9052854	9053547	.	+	.	source_transcript=hg002_chrY_paternal_168.4;source_transcript_name=hg002_chrY_paternal_168.1;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_168.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.4,hg002_chrY_paternal_168.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000257;gene_id=HG03009_ch_G0000092;Parent=HG03009_ch_T0000257;transcript_name=hg002_chrY_paternal_168.1;gene_name=TSPY10;ID=intron:HG03009_ch_T0000257:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9053548	9053758	.	+	.	source_transcript=hg002_chrY_paternal_168.4;source_transcript_name=hg002_chrY_paternal_168.1;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_168.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.4,hg002_chrY_paternal_168.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000257;gene_id=HG03009_ch_G0000092;Parent=HG03009_ch_T0000257;transcript_name=hg002_chrY_paternal_168.1;gene_name=TSPY10;ID=exon:HG03009_ch_T0000257:5;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	9063032	9068634	.	-	.	source_gene_common_name=FAM197Y3;source_gene=hg002_chrY_paternal_189;alternative_source_transcripts=hg002_chrY_paternal_169.1,hg002_chrY_paternal_169.1;gene_id=HG03009_ch_G0000093;gene_biotype=lncRNA;gene_name=FAM197Y3;gene_sources=liftoff;ID=HG03009_ch_G0000093;Name=FAM197Y3
HG03009_chrY	CAT	transcript	9063032	9068634	1000	-	.	source_transcript=hg002_chrY_paternal_189.1;source_transcript_name=hg002_chrY_paternal_189.1;source_gene=hg002_chrY_paternal_189;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_189;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_189.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_189.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_169.1,hg002_chrY_paternal_169.1;transcript_id=HG03009_ch_T0000258;gene_id=HG03009_ch_G0000093;Parent=HG03009_ch_G0000093;transcript_name=hg002_chrY_paternal_189.1;gene_name=FAM197Y3;ID=HG03009_ch_T0000258;Name=FAM197Y3
HG03009_chrY	CAT	exon	9063032	9063091	.	-	.	source_transcript=hg002_chrY_paternal_189.1;source_transcript_name=hg002_chrY_paternal_189.1;source_gene=hg002_chrY_paternal_189;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_189;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_189.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_169.1,hg002_chrY_paternal_169.1;transcript_id=HG03009_ch_T0000258;gene_id=HG03009_ch_G0000093;Parent=HG03009_ch_T0000258;transcript_name=hg002_chrY_paternal_189.1;gene_name=FAM197Y3;ID=exon:HG03009_ch_T0000258:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9063092	9066639	.	-	.	source_transcript=hg002_chrY_paternal_189.1;source_transcript_name=hg002_chrY_paternal_189.1;source_gene=hg002_chrY_paternal_189;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_189;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_189.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_169.1,hg002_chrY_paternal_169.1;transcript_id=HG03009_ch_T0000258;gene_id=HG03009_ch_G0000093;Parent=HG03009_ch_T0000258;transcript_name=hg002_chrY_paternal_189.1;gene_name=FAM197Y3;ID=intron:HG03009_ch_T0000258:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9066640	9066798	.	-	.	source_transcript=hg002_chrY_paternal_189.1;source_transcript_name=hg002_chrY_paternal_189.1;source_gene=hg002_chrY_paternal_189;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_189;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_189.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_169.1,hg002_chrY_paternal_169.1;transcript_id=HG03009_ch_T0000258;gene_id=HG03009_ch_G0000093;Parent=HG03009_ch_T0000258;transcript_name=hg002_chrY_paternal_189.1;gene_name=FAM197Y3;ID=exon:HG03009_ch_T0000258:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9066799	9068300	.	-	.	source_transcript=hg002_chrY_paternal_189.1;source_transcript_name=hg002_chrY_paternal_189.1;source_gene=hg002_chrY_paternal_189;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_189;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_189.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_169.1,hg002_chrY_paternal_169.1;transcript_id=HG03009_ch_T0000258;gene_id=HG03009_ch_G0000093;Parent=HG03009_ch_T0000258;transcript_name=hg002_chrY_paternal_189.1;gene_name=FAM197Y3;ID=intron:HG03009_ch_T0000258:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9068301	9068446	.	-	.	source_transcript=hg002_chrY_paternal_189.1;source_transcript_name=hg002_chrY_paternal_189.1;source_gene=hg002_chrY_paternal_189;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_189;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_189.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_169.1,hg002_chrY_paternal_169.1;transcript_id=HG03009_ch_T0000258;gene_id=HG03009_ch_G0000093;Parent=HG03009_ch_T0000258;transcript_name=hg002_chrY_paternal_189.1;gene_name=FAM197Y3;ID=exon:HG03009_ch_T0000258:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9068447	9068532	.	-	.	source_transcript=hg002_chrY_paternal_189.1;source_transcript_name=hg002_chrY_paternal_189.1;source_gene=hg002_chrY_paternal_189;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_189;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_189.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_169.1,hg002_chrY_paternal_169.1;transcript_id=HG03009_ch_T0000258;gene_id=HG03009_ch_G0000093;Parent=HG03009_ch_T0000258;transcript_name=hg002_chrY_paternal_189.1;gene_name=FAM197Y3;ID=intron:HG03009_ch_T0000258:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9068533	9068634	.	-	.	source_transcript=hg002_chrY_paternal_189.1;source_transcript_name=hg002_chrY_paternal_189.1;source_gene=hg002_chrY_paternal_189;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_189;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_189.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_169.1,hg002_chrY_paternal_169.1;transcript_id=HG03009_ch_T0000258;gene_id=HG03009_ch_G0000093;Parent=HG03009_ch_T0000258;transcript_name=hg002_chrY_paternal_189.1;gene_name=FAM197Y3;ID=exon:HG03009_ch_T0000258:3;Name=FAM197Y3;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	9071243	9074039	.	+	.	source_gene_common_name=TSPY10;source_gene=hg002_chrY_paternal_190;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_170.1;gene_id=HG03009_ch_G0000094;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff;ID=HG03009_ch_G0000094;Name=TSPY10
HG03009_chrY	CAT	transcript	9071243	9074039	100	+	.	source_transcript=hg002_chrY_paternal_190.1;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_170.1;transcript_id=HG03009_ch_T0000259;gene_id=HG03009_ch_G0000094;Parent=HG03009_ch_G0000094;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=HG03009_ch_T0000259;Name=TSPY10
HG03009_chrY	CAT	exon	9071243	9071774	.	+	.	source_transcript=hg002_chrY_paternal_190.1;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_170.1;transcript_id=HG03009_ch_T0000259;gene_id=HG03009_ch_G0000094;Parent=HG03009_ch_T0000259;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000259:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9071289	9071774	.	+	0	source_transcript=hg002_chrY_paternal_190.1;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_170.1;transcript_id=HG03009_ch_T0000259;gene_id=HG03009_ch_G0000094;Parent=HG03009_ch_T0000259;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000259:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	9071289	9071291	.	+	0	source_transcript=hg002_chrY_paternal_190.1;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_170.1;transcript_id=HG03009_ch_T0000259;gene_id=HG03009_ch_G0000094;Parent=HG03009_ch_T0000259;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=start_codon:HG03009_ch_T0000259;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9071775	9072381	.	+	.	source_transcript=hg002_chrY_paternal_190.1;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_170.1;transcript_id=HG03009_ch_T0000259;gene_id=HG03009_ch_G0000094;Parent=HG03009_ch_T0000259;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000259:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9072382	9072459	.	+	.	source_transcript=hg002_chrY_paternal_190.1;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_170.1;transcript_id=HG03009_ch_T0000259;gene_id=HG03009_ch_G0000094;Parent=HG03009_ch_T0000259;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000259:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9072382	9072459	.	+	0	source_transcript=hg002_chrY_paternal_190.1;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_170.1;transcript_id=HG03009_ch_T0000259;gene_id=HG03009_ch_G0000094;Parent=HG03009_ch_T0000259;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000259:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9072460	9072587	.	+	.	source_transcript=hg002_chrY_paternal_190.1;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_170.1;transcript_id=HG03009_ch_T0000259;gene_id=HG03009_ch_G0000094;Parent=HG03009_ch_T0000259;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000259:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9072588	9072699	.	+	.	source_transcript=hg002_chrY_paternal_190.1;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_170.1;transcript_id=HG03009_ch_T0000259;gene_id=HG03009_ch_G0000094;Parent=HG03009_ch_T0000259;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000259:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9072588	9072699	.	+	0	source_transcript=hg002_chrY_paternal_190.1;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_170.1;transcript_id=HG03009_ch_T0000259;gene_id=HG03009_ch_G0000094;Parent=HG03009_ch_T0000259;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000259:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9072700	9072800	.	+	.	source_transcript=hg002_chrY_paternal_190.1;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_170.1;transcript_id=HG03009_ch_T0000259;gene_id=HG03009_ch_G0000094;Parent=HG03009_ch_T0000259;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000259:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9072801	9072946	.	+	.	source_transcript=hg002_chrY_paternal_190.1;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_170.1;transcript_id=HG03009_ch_T0000259;gene_id=HG03009_ch_G0000094;Parent=HG03009_ch_T0000259;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000259:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9072801	9072946	.	+	2	source_transcript=hg002_chrY_paternal_190.1;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_170.1;transcript_id=HG03009_ch_T0000259;gene_id=HG03009_ch_G0000094;Parent=HG03009_ch_T0000259;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000259:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9072947	9073052	.	+	.	source_transcript=hg002_chrY_paternal_190.1;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_170.1;transcript_id=HG03009_ch_T0000259;gene_id=HG03009_ch_G0000094;Parent=HG03009_ch_T0000259;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000259:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9073053	9073134	.	+	.	source_transcript=hg002_chrY_paternal_190.1;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_170.1;transcript_id=HG03009_ch_T0000259;gene_id=HG03009_ch_G0000094;Parent=HG03009_ch_T0000259;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000259:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9073053	9073134	.	+	0	source_transcript=hg002_chrY_paternal_190.1;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_170.1;transcript_id=HG03009_ch_T0000259;gene_id=HG03009_ch_G0000094;Parent=HG03009_ch_T0000259;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000259:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9073135	9073828	.	+	.	source_transcript=hg002_chrY_paternal_190.1;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_170.1;transcript_id=HG03009_ch_T0000259;gene_id=HG03009_ch_G0000094;Parent=HG03009_ch_T0000259;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000259:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9073829	9074039	.	+	.	source_transcript=hg002_chrY_paternal_190.1;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_170.1;transcript_id=HG03009_ch_T0000259;gene_id=HG03009_ch_G0000094;Parent=HG03009_ch_T0000259;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000259:5;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9073829	9073851	.	+	2	source_transcript=hg002_chrY_paternal_190.1;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_170.1;transcript_id=HG03009_ch_T0000259;gene_id=HG03009_ch_G0000094;Parent=HG03009_ch_T0000259;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000259:5;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	9073849	9073851	.	+	0	source_transcript=hg002_chrY_paternal_190.1;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_170.1;transcript_id=HG03009_ch_T0000259;gene_id=HG03009_ch_G0000094;Parent=HG03009_ch_T0000259;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=stop_codon:HG03009_ch_T0000259;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	9071243	9074039	100	+	.	source_transcript=hg002_chrY_paternal_190.2;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_170.2;transcript_id=HG03009_ch_T0000260;gene_id=HG03009_ch_G0000094;Parent=HG03009_ch_G0000094;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=HG03009_ch_T0000260;Name=TSPY10
HG03009_chrY	CAT	exon	9071243	9071774	.	+	.	source_transcript=hg002_chrY_paternal_190.2;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_170.2;transcript_id=HG03009_ch_T0000260;gene_id=HG03009_ch_G0000094;Parent=HG03009_ch_T0000260;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000260:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9071289	9071774	.	+	0	source_transcript=hg002_chrY_paternal_190.2;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_170.2;transcript_id=HG03009_ch_T0000260;gene_id=HG03009_ch_G0000094;Parent=HG03009_ch_T0000260;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000260:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	9071289	9071291	.	+	0	source_transcript=hg002_chrY_paternal_190.2;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_170.2;transcript_id=HG03009_ch_T0000260;gene_id=HG03009_ch_G0000094;Parent=HG03009_ch_T0000260;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=start_codon:HG03009_ch_T0000260;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9071775	9072381	.	+	.	source_transcript=hg002_chrY_paternal_190.2;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_170.2;transcript_id=HG03009_ch_T0000260;gene_id=HG03009_ch_G0000094;Parent=HG03009_ch_T0000260;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000260:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9072382	9072459	.	+	.	source_transcript=hg002_chrY_paternal_190.2;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_170.2;transcript_id=HG03009_ch_T0000260;gene_id=HG03009_ch_G0000094;Parent=HG03009_ch_T0000260;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000260:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9072382	9072459	.	+	0	source_transcript=hg002_chrY_paternal_190.2;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_170.2;transcript_id=HG03009_ch_T0000260;gene_id=HG03009_ch_G0000094;Parent=HG03009_ch_T0000260;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000260:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9072460	9072587	.	+	.	source_transcript=hg002_chrY_paternal_190.2;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_170.2;transcript_id=HG03009_ch_T0000260;gene_id=HG03009_ch_G0000094;Parent=HG03009_ch_T0000260;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000260:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9072588	9072699	.	+	.	source_transcript=hg002_chrY_paternal_190.2;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_170.2;transcript_id=HG03009_ch_T0000260;gene_id=HG03009_ch_G0000094;Parent=HG03009_ch_T0000260;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000260:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9072588	9072699	.	+	0	source_transcript=hg002_chrY_paternal_190.2;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_170.2;transcript_id=HG03009_ch_T0000260;gene_id=HG03009_ch_G0000094;Parent=HG03009_ch_T0000260;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000260:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9072700	9072800	.	+	.	source_transcript=hg002_chrY_paternal_190.2;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_170.2;transcript_id=HG03009_ch_T0000260;gene_id=HG03009_ch_G0000094;Parent=HG03009_ch_T0000260;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000260:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9072801	9072946	.	+	.	source_transcript=hg002_chrY_paternal_190.2;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_170.2;transcript_id=HG03009_ch_T0000260;gene_id=HG03009_ch_G0000094;Parent=HG03009_ch_T0000260;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000260:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9072801	9072946	.	+	2	source_transcript=hg002_chrY_paternal_190.2;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_170.2;transcript_id=HG03009_ch_T0000260;gene_id=HG03009_ch_G0000094;Parent=HG03009_ch_T0000260;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000260:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9072947	9073041	.	+	.	source_transcript=hg002_chrY_paternal_190.2;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_170.2;transcript_id=HG03009_ch_T0000260;gene_id=HG03009_ch_G0000094;Parent=HG03009_ch_T0000260;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000260:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9073042	9073134	.	+	.	source_transcript=hg002_chrY_paternal_190.2;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_170.2;transcript_id=HG03009_ch_T0000260;gene_id=HG03009_ch_G0000094;Parent=HG03009_ch_T0000260;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000260:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9073042	9073104	.	+	0	source_transcript=hg002_chrY_paternal_190.2;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_170.2;transcript_id=HG03009_ch_T0000260;gene_id=HG03009_ch_G0000094;Parent=HG03009_ch_T0000260;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000260:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	9073102	9073104	.	+	0	source_transcript=hg002_chrY_paternal_190.2;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_170.2;transcript_id=HG03009_ch_T0000260;gene_id=HG03009_ch_G0000094;Parent=HG03009_ch_T0000260;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=stop_codon:HG03009_ch_T0000260;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9073135	9073828	.	+	.	source_transcript=hg002_chrY_paternal_190.2;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_170.2;transcript_id=HG03009_ch_T0000260;gene_id=HG03009_ch_G0000094;Parent=HG03009_ch_T0000260;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000260:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9073829	9074039	.	+	.	source_transcript=hg002_chrY_paternal_190.2;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_170.2;transcript_id=HG03009_ch_T0000260;gene_id=HG03009_ch_G0000094;Parent=HG03009_ch_T0000260;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000260:5;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	9071243	9074039	100	+	.	source_transcript=hg002_chrY_paternal_190.3;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_170.3;transcript_id=HG03009_ch_T0000261;gene_id=HG03009_ch_G0000094;Parent=HG03009_ch_G0000094;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=HG03009_ch_T0000261;Name=TSPY10
HG03009_chrY	CAT	exon	9071243	9071774	.	+	.	source_transcript=hg002_chrY_paternal_190.3;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_170.3;transcript_id=HG03009_ch_T0000261;gene_id=HG03009_ch_G0000094;Parent=HG03009_ch_T0000261;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000261:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9071289	9071774	.	+	0	source_transcript=hg002_chrY_paternal_190.3;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_170.3;transcript_id=HG03009_ch_T0000261;gene_id=HG03009_ch_G0000094;Parent=HG03009_ch_T0000261;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000261:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	9071289	9071291	.	+	0	source_transcript=hg002_chrY_paternal_190.3;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_170.3;transcript_id=HG03009_ch_T0000261;gene_id=HG03009_ch_G0000094;Parent=HG03009_ch_T0000261;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=start_codon:HG03009_ch_T0000261;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9071775	9072381	.	+	.	source_transcript=hg002_chrY_paternal_190.3;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_170.3;transcript_id=HG03009_ch_T0000261;gene_id=HG03009_ch_G0000094;Parent=HG03009_ch_T0000261;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000261:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9072382	9072459	.	+	.	source_transcript=hg002_chrY_paternal_190.3;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_170.3;transcript_id=HG03009_ch_T0000261;gene_id=HG03009_ch_G0000094;Parent=HG03009_ch_T0000261;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000261:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9072382	9072459	.	+	0	source_transcript=hg002_chrY_paternal_190.3;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_170.3;transcript_id=HG03009_ch_T0000261;gene_id=HG03009_ch_G0000094;Parent=HG03009_ch_T0000261;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000261:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9072460	9072587	.	+	.	source_transcript=hg002_chrY_paternal_190.3;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_170.3;transcript_id=HG03009_ch_T0000261;gene_id=HG03009_ch_G0000094;Parent=HG03009_ch_T0000261;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000261:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9072588	9072699	.	+	.	source_transcript=hg002_chrY_paternal_190.3;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_170.3;transcript_id=HG03009_ch_T0000261;gene_id=HG03009_ch_G0000094;Parent=HG03009_ch_T0000261;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000261:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9072588	9072699	.	+	0	source_transcript=hg002_chrY_paternal_190.3;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_170.3;transcript_id=HG03009_ch_T0000261;gene_id=HG03009_ch_G0000094;Parent=HG03009_ch_T0000261;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000261:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9072700	9072807	.	+	.	source_transcript=hg002_chrY_paternal_190.3;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_170.3;transcript_id=HG03009_ch_T0000261;gene_id=HG03009_ch_G0000094;Parent=HG03009_ch_T0000261;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000261:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9072808	9072946	.	+	.	source_transcript=hg002_chrY_paternal_190.3;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_170.3;transcript_id=HG03009_ch_T0000261;gene_id=HG03009_ch_G0000094;Parent=HG03009_ch_T0000261;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000261:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9072808	9072946	.	+	2	source_transcript=hg002_chrY_paternal_190.3;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_170.3;transcript_id=HG03009_ch_T0000261;gene_id=HG03009_ch_G0000094;Parent=HG03009_ch_T0000261;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000261:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9072947	9073052	.	+	.	source_transcript=hg002_chrY_paternal_190.3;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_170.3;transcript_id=HG03009_ch_T0000261;gene_id=HG03009_ch_G0000094;Parent=HG03009_ch_T0000261;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000261:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9073053	9073134	.	+	.	source_transcript=hg002_chrY_paternal_190.3;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_170.3;transcript_id=HG03009_ch_T0000261;gene_id=HG03009_ch_G0000094;Parent=HG03009_ch_T0000261;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000261:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9073053	9073104	.	+	1	source_transcript=hg002_chrY_paternal_190.3;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_170.3;transcript_id=HG03009_ch_T0000261;gene_id=HG03009_ch_G0000094;Parent=HG03009_ch_T0000261;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000261:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	9073102	9073104	.	+	0	source_transcript=hg002_chrY_paternal_190.3;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_170.3;transcript_id=HG03009_ch_T0000261;gene_id=HG03009_ch_G0000094;Parent=HG03009_ch_T0000261;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=stop_codon:HG03009_ch_T0000261;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9073135	9073828	.	+	.	source_transcript=hg002_chrY_paternal_190.3;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_170.3;transcript_id=HG03009_ch_T0000261;gene_id=HG03009_ch_G0000094;Parent=HG03009_ch_T0000261;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000261:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9073829	9074039	.	+	.	source_transcript=hg002_chrY_paternal_190.3;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_170.3;transcript_id=HG03009_ch_T0000261;gene_id=HG03009_ch_G0000094;Parent=HG03009_ch_T0000261;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000261:5;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	9071243	9074039	1000	+	.	source_transcript=hg002_chrY_paternal_190.4;source_transcript_name=hg002_chrY_paternal_190.1;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_190.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.4,hg002_chrY_paternal_170.4;transcript_id=HG03009_ch_T0000262;gene_id=HG03009_ch_G0000094;Parent=HG03009_ch_G0000094;transcript_name=hg002_chrY_paternal_190.1;gene_name=TSPY10;ID=HG03009_ch_T0000262;Name=TSPY10
HG03009_chrY	CAT	exon	9071243	9071774	.	+	.	source_transcript=hg002_chrY_paternal_190.4;source_transcript_name=hg002_chrY_paternal_190.1;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_190.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.4,hg002_chrY_paternal_170.4;transcript_id=HG03009_ch_T0000262;gene_id=HG03009_ch_G0000094;Parent=HG03009_ch_T0000262;transcript_name=hg002_chrY_paternal_190.1;gene_name=TSPY10;ID=exon:HG03009_ch_T0000262:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9071775	9072381	.	+	.	source_transcript=hg002_chrY_paternal_190.4;source_transcript_name=hg002_chrY_paternal_190.1;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_190.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.4,hg002_chrY_paternal_170.4;transcript_id=HG03009_ch_T0000262;gene_id=HG03009_ch_G0000094;Parent=HG03009_ch_T0000262;transcript_name=hg002_chrY_paternal_190.1;gene_name=TSPY10;ID=intron:HG03009_ch_T0000262:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9072382	9072459	.	+	.	source_transcript=hg002_chrY_paternal_190.4;source_transcript_name=hg002_chrY_paternal_190.1;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_190.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.4,hg002_chrY_paternal_170.4;transcript_id=HG03009_ch_T0000262;gene_id=HG03009_ch_G0000094;Parent=HG03009_ch_T0000262;transcript_name=hg002_chrY_paternal_190.1;gene_name=TSPY10;ID=exon:HG03009_ch_T0000262:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9072460	9072587	.	+	.	source_transcript=hg002_chrY_paternal_190.4;source_transcript_name=hg002_chrY_paternal_190.1;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_190.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.4,hg002_chrY_paternal_170.4;transcript_id=HG03009_ch_T0000262;gene_id=HG03009_ch_G0000094;Parent=HG03009_ch_T0000262;transcript_name=hg002_chrY_paternal_190.1;gene_name=TSPY10;ID=intron:HG03009_ch_T0000262:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9072588	9072699	.	+	.	source_transcript=hg002_chrY_paternal_190.4;source_transcript_name=hg002_chrY_paternal_190.1;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_190.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.4,hg002_chrY_paternal_170.4;transcript_id=HG03009_ch_T0000262;gene_id=HG03009_ch_G0000094;Parent=HG03009_ch_T0000262;transcript_name=hg002_chrY_paternal_190.1;gene_name=TSPY10;ID=exon:HG03009_ch_T0000262:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9072700	9072807	.	+	.	source_transcript=hg002_chrY_paternal_190.4;source_transcript_name=hg002_chrY_paternal_190.1;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_190.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.4,hg002_chrY_paternal_170.4;transcript_id=HG03009_ch_T0000262;gene_id=HG03009_ch_G0000094;Parent=HG03009_ch_T0000262;transcript_name=hg002_chrY_paternal_190.1;gene_name=TSPY10;ID=intron:HG03009_ch_T0000262:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9072808	9072946	.	+	.	source_transcript=hg002_chrY_paternal_190.4;source_transcript_name=hg002_chrY_paternal_190.1;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_190.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.4,hg002_chrY_paternal_170.4;transcript_id=HG03009_ch_T0000262;gene_id=HG03009_ch_G0000094;Parent=HG03009_ch_T0000262;transcript_name=hg002_chrY_paternal_190.1;gene_name=TSPY10;ID=exon:HG03009_ch_T0000262:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9072947	9073041	.	+	.	source_transcript=hg002_chrY_paternal_190.4;source_transcript_name=hg002_chrY_paternal_190.1;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_190.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.4,hg002_chrY_paternal_170.4;transcript_id=HG03009_ch_T0000262;gene_id=HG03009_ch_G0000094;Parent=HG03009_ch_T0000262;transcript_name=hg002_chrY_paternal_190.1;gene_name=TSPY10;ID=intron:HG03009_ch_T0000262:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9073042	9073134	.	+	.	source_transcript=hg002_chrY_paternal_190.4;source_transcript_name=hg002_chrY_paternal_190.1;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_190.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.4,hg002_chrY_paternal_170.4;transcript_id=HG03009_ch_T0000262;gene_id=HG03009_ch_G0000094;Parent=HG03009_ch_T0000262;transcript_name=hg002_chrY_paternal_190.1;gene_name=TSPY10;ID=exon:HG03009_ch_T0000262:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9073135	9073828	.	+	.	source_transcript=hg002_chrY_paternal_190.4;source_transcript_name=hg002_chrY_paternal_190.1;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_190.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.4,hg002_chrY_paternal_170.4;transcript_id=HG03009_ch_T0000262;gene_id=HG03009_ch_G0000094;Parent=HG03009_ch_T0000262;transcript_name=hg002_chrY_paternal_190.1;gene_name=TSPY10;ID=intron:HG03009_ch_T0000262:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9073829	9074039	.	+	.	source_transcript=hg002_chrY_paternal_190.4;source_transcript_name=hg002_chrY_paternal_190.1;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_190.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.4,hg002_chrY_paternal_170.4;transcript_id=HG03009_ch_T0000262;gene_id=HG03009_ch_G0000094;Parent=HG03009_ch_T0000262;transcript_name=hg002_chrY_paternal_190.1;gene_name=TSPY10;ID=exon:HG03009_ch_T0000262:5;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	9083311	9089004	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_191;alternative_source_transcripts=hg002_chrY_paternal_171.1,hg002_chrY_paternal_171.1;gene_id=HG03009_ch_G0000095;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=HG03009_ch_G0000095;Name=FAM197Y2
HG03009_chrY	CAT	transcript	9083311	9089004	1000	-	.	source_transcript=hg002_chrY_paternal_191.1;source_transcript_name=hg002_chrY_paternal_191.1;source_gene=hg002_chrY_paternal_191;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_191;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_191.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_191.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_171.1,hg002_chrY_paternal_171.1;transcript_id=HG03009_ch_T0000263;gene_id=HG03009_ch_G0000095;Parent=HG03009_ch_G0000095;transcript_name=hg002_chrY_paternal_191.1;gene_name=FAM197Y2;ID=HG03009_ch_T0000263;Name=FAM197Y2
HG03009_chrY	CAT	exon	9083311	9083370	.	-	.	source_transcript=hg002_chrY_paternal_191.1;source_transcript_name=hg002_chrY_paternal_191.1;source_gene=hg002_chrY_paternal_191;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_191;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_191.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_171.1,hg002_chrY_paternal_171.1;transcript_id=HG03009_ch_T0000263;gene_id=HG03009_ch_G0000095;Parent=HG03009_ch_T0000263;transcript_name=hg002_chrY_paternal_191.1;gene_name=FAM197Y2;ID=exon:HG03009_ch_T0000263:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9083371	9086920	.	-	.	source_transcript=hg002_chrY_paternal_191.1;source_transcript_name=hg002_chrY_paternal_191.1;source_gene=hg002_chrY_paternal_191;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_191;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_191.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_171.1,hg002_chrY_paternal_171.1;transcript_id=HG03009_ch_T0000263;gene_id=HG03009_ch_G0000095;Parent=HG03009_ch_T0000263;transcript_name=hg002_chrY_paternal_191.1;gene_name=FAM197Y2;ID=intron:HG03009_ch_T0000263:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9086921	9087079	.	-	.	source_transcript=hg002_chrY_paternal_191.1;source_transcript_name=hg002_chrY_paternal_191.1;source_gene=hg002_chrY_paternal_191;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_191;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_191.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_171.1,hg002_chrY_paternal_171.1;transcript_id=HG03009_ch_T0000263;gene_id=HG03009_ch_G0000095;Parent=HG03009_ch_T0000263;transcript_name=hg002_chrY_paternal_191.1;gene_name=FAM197Y2;ID=exon:HG03009_ch_T0000263:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9087080	9088581	.	-	.	source_transcript=hg002_chrY_paternal_191.1;source_transcript_name=hg002_chrY_paternal_191.1;source_gene=hg002_chrY_paternal_191;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_191;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_191.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_171.1,hg002_chrY_paternal_171.1;transcript_id=HG03009_ch_T0000263;gene_id=HG03009_ch_G0000095;Parent=HG03009_ch_T0000263;transcript_name=hg002_chrY_paternal_191.1;gene_name=FAM197Y2;ID=intron:HG03009_ch_T0000263:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9088582	9088727	.	-	.	source_transcript=hg002_chrY_paternal_191.1;source_transcript_name=hg002_chrY_paternal_191.1;source_gene=hg002_chrY_paternal_191;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_191;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_191.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_171.1,hg002_chrY_paternal_171.1;transcript_id=HG03009_ch_T0000263;gene_id=HG03009_ch_G0000095;Parent=HG03009_ch_T0000263;transcript_name=hg002_chrY_paternal_191.1;gene_name=FAM197Y2;ID=exon:HG03009_ch_T0000263:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9088728	9088813	.	-	.	source_transcript=hg002_chrY_paternal_191.1;source_transcript_name=hg002_chrY_paternal_191.1;source_gene=hg002_chrY_paternal_191;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_191;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_191.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_171.1,hg002_chrY_paternal_171.1;transcript_id=HG03009_ch_T0000263;gene_id=HG03009_ch_G0000095;Parent=HG03009_ch_T0000263;transcript_name=hg002_chrY_paternal_191.1;gene_name=FAM197Y2;ID=intron:HG03009_ch_T0000263:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9088814	9089004	.	-	.	source_transcript=hg002_chrY_paternal_191.1;source_transcript_name=hg002_chrY_paternal_191.1;source_gene=hg002_chrY_paternal_191;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_191;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_191.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_171.1,hg002_chrY_paternal_171.1;transcript_id=HG03009_ch_T0000263;gene_id=HG03009_ch_G0000095;Parent=HG03009_ch_T0000263;transcript_name=hg002_chrY_paternal_191.1;gene_name=FAM197Y2;ID=exon:HG03009_ch_T0000263:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	9091528	9094324	.	+	.	source_gene_common_name=TSPY10;source_gene=hg002_chrY_paternal_192;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_172.1;gene_id=HG03009_ch_G0000096;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff;ID=HG03009_ch_G0000096;Name=TSPY10
HG03009_chrY	CAT	transcript	9091528	9094324	100	+	.	source_transcript=hg002_chrY_paternal_192.1;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_172.1;transcript_id=HG03009_ch_T0000264;gene_id=HG03009_ch_G0000096;Parent=HG03009_ch_G0000096;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=HG03009_ch_T0000264;Name=TSPY10
HG03009_chrY	CAT	exon	9091528	9092059	.	+	.	source_transcript=hg002_chrY_paternal_192.1;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_172.1;transcript_id=HG03009_ch_T0000264;gene_id=HG03009_ch_G0000096;Parent=HG03009_ch_T0000264;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000264:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9091574	9092059	.	+	0	source_transcript=hg002_chrY_paternal_192.1;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_172.1;transcript_id=HG03009_ch_T0000264;gene_id=HG03009_ch_G0000096;Parent=HG03009_ch_T0000264;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000264:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	9091574	9091576	.	+	0	source_transcript=hg002_chrY_paternal_192.1;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_172.1;transcript_id=HG03009_ch_T0000264;gene_id=HG03009_ch_G0000096;Parent=HG03009_ch_T0000264;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=start_codon:HG03009_ch_T0000264;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9092060	9092666	.	+	.	source_transcript=hg002_chrY_paternal_192.1;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_172.1;transcript_id=HG03009_ch_T0000264;gene_id=HG03009_ch_G0000096;Parent=HG03009_ch_T0000264;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000264:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9092667	9092744	.	+	.	source_transcript=hg002_chrY_paternal_192.1;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_172.1;transcript_id=HG03009_ch_T0000264;gene_id=HG03009_ch_G0000096;Parent=HG03009_ch_T0000264;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000264:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9092667	9092744	.	+	0	source_transcript=hg002_chrY_paternal_192.1;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_172.1;transcript_id=HG03009_ch_T0000264;gene_id=HG03009_ch_G0000096;Parent=HG03009_ch_T0000264;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000264:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9092745	9092872	.	+	.	source_transcript=hg002_chrY_paternal_192.1;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_172.1;transcript_id=HG03009_ch_T0000264;gene_id=HG03009_ch_G0000096;Parent=HG03009_ch_T0000264;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000264:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9092873	9092984	.	+	.	source_transcript=hg002_chrY_paternal_192.1;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_172.1;transcript_id=HG03009_ch_T0000264;gene_id=HG03009_ch_G0000096;Parent=HG03009_ch_T0000264;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000264:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9092873	9092984	.	+	0	source_transcript=hg002_chrY_paternal_192.1;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_172.1;transcript_id=HG03009_ch_T0000264;gene_id=HG03009_ch_G0000096;Parent=HG03009_ch_T0000264;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000264:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9092985	9093085	.	+	.	source_transcript=hg002_chrY_paternal_192.1;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_172.1;transcript_id=HG03009_ch_T0000264;gene_id=HG03009_ch_G0000096;Parent=HG03009_ch_T0000264;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000264:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9093086	9093231	.	+	.	source_transcript=hg002_chrY_paternal_192.1;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_172.1;transcript_id=HG03009_ch_T0000264;gene_id=HG03009_ch_G0000096;Parent=HG03009_ch_T0000264;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000264:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9093086	9093231	.	+	2	source_transcript=hg002_chrY_paternal_192.1;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_172.1;transcript_id=HG03009_ch_T0000264;gene_id=HG03009_ch_G0000096;Parent=HG03009_ch_T0000264;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000264:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9093232	9093337	.	+	.	source_transcript=hg002_chrY_paternal_192.1;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_172.1;transcript_id=HG03009_ch_T0000264;gene_id=HG03009_ch_G0000096;Parent=HG03009_ch_T0000264;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000264:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9093338	9093419	.	+	.	source_transcript=hg002_chrY_paternal_192.1;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_172.1;transcript_id=HG03009_ch_T0000264;gene_id=HG03009_ch_G0000096;Parent=HG03009_ch_T0000264;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000264:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9093338	9093419	.	+	0	source_transcript=hg002_chrY_paternal_192.1;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_172.1;transcript_id=HG03009_ch_T0000264;gene_id=HG03009_ch_G0000096;Parent=HG03009_ch_T0000264;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000264:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9093420	9094113	.	+	.	source_transcript=hg002_chrY_paternal_192.1;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_172.1;transcript_id=HG03009_ch_T0000264;gene_id=HG03009_ch_G0000096;Parent=HG03009_ch_T0000264;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000264:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9094114	9094324	.	+	.	source_transcript=hg002_chrY_paternal_192.1;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_172.1;transcript_id=HG03009_ch_T0000264;gene_id=HG03009_ch_G0000096;Parent=HG03009_ch_T0000264;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000264:5;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9094114	9094136	.	+	2	source_transcript=hg002_chrY_paternal_192.1;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_172.1;transcript_id=HG03009_ch_T0000264;gene_id=HG03009_ch_G0000096;Parent=HG03009_ch_T0000264;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000264:5;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	9094134	9094136	.	+	0	source_transcript=hg002_chrY_paternal_192.1;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_172.1;transcript_id=HG03009_ch_T0000264;gene_id=HG03009_ch_G0000096;Parent=HG03009_ch_T0000264;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=stop_codon:HG03009_ch_T0000264;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	9091528	9094324	100	+	.	source_transcript=hg002_chrY_paternal_192.2;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_172.2;transcript_id=HG03009_ch_T0000265;gene_id=HG03009_ch_G0000096;Parent=HG03009_ch_G0000096;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=HG03009_ch_T0000265;Name=TSPY10
HG03009_chrY	CAT	exon	9091528	9092059	.	+	.	source_transcript=hg002_chrY_paternal_192.2;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_172.2;transcript_id=HG03009_ch_T0000265;gene_id=HG03009_ch_G0000096;Parent=HG03009_ch_T0000265;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000265:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9091574	9092059	.	+	0	source_transcript=hg002_chrY_paternal_192.2;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_172.2;transcript_id=HG03009_ch_T0000265;gene_id=HG03009_ch_G0000096;Parent=HG03009_ch_T0000265;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000265:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	9091574	9091576	.	+	0	source_transcript=hg002_chrY_paternal_192.2;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_172.2;transcript_id=HG03009_ch_T0000265;gene_id=HG03009_ch_G0000096;Parent=HG03009_ch_T0000265;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=start_codon:HG03009_ch_T0000265;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9092060	9092666	.	+	.	source_transcript=hg002_chrY_paternal_192.2;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_172.2;transcript_id=HG03009_ch_T0000265;gene_id=HG03009_ch_G0000096;Parent=HG03009_ch_T0000265;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000265:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9092667	9092744	.	+	.	source_transcript=hg002_chrY_paternal_192.2;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_172.2;transcript_id=HG03009_ch_T0000265;gene_id=HG03009_ch_G0000096;Parent=HG03009_ch_T0000265;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000265:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9092667	9092744	.	+	0	source_transcript=hg002_chrY_paternal_192.2;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_172.2;transcript_id=HG03009_ch_T0000265;gene_id=HG03009_ch_G0000096;Parent=HG03009_ch_T0000265;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000265:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9092745	9092872	.	+	.	source_transcript=hg002_chrY_paternal_192.2;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_172.2;transcript_id=HG03009_ch_T0000265;gene_id=HG03009_ch_G0000096;Parent=HG03009_ch_T0000265;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000265:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9092873	9092984	.	+	.	source_transcript=hg002_chrY_paternal_192.2;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_172.2;transcript_id=HG03009_ch_T0000265;gene_id=HG03009_ch_G0000096;Parent=HG03009_ch_T0000265;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000265:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9092873	9092984	.	+	0	source_transcript=hg002_chrY_paternal_192.2;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_172.2;transcript_id=HG03009_ch_T0000265;gene_id=HG03009_ch_G0000096;Parent=HG03009_ch_T0000265;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000265:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9092985	9093085	.	+	.	source_transcript=hg002_chrY_paternal_192.2;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_172.2;transcript_id=HG03009_ch_T0000265;gene_id=HG03009_ch_G0000096;Parent=HG03009_ch_T0000265;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000265:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9093086	9093231	.	+	.	source_transcript=hg002_chrY_paternal_192.2;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_172.2;transcript_id=HG03009_ch_T0000265;gene_id=HG03009_ch_G0000096;Parent=HG03009_ch_T0000265;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000265:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9093086	9093231	.	+	2	source_transcript=hg002_chrY_paternal_192.2;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_172.2;transcript_id=HG03009_ch_T0000265;gene_id=HG03009_ch_G0000096;Parent=HG03009_ch_T0000265;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000265:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9093232	9093326	.	+	.	source_transcript=hg002_chrY_paternal_192.2;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_172.2;transcript_id=HG03009_ch_T0000265;gene_id=HG03009_ch_G0000096;Parent=HG03009_ch_T0000265;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000265:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9093327	9093419	.	+	.	source_transcript=hg002_chrY_paternal_192.2;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_172.2;transcript_id=HG03009_ch_T0000265;gene_id=HG03009_ch_G0000096;Parent=HG03009_ch_T0000265;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000265:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9093327	9093389	.	+	0	source_transcript=hg002_chrY_paternal_192.2;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_172.2;transcript_id=HG03009_ch_T0000265;gene_id=HG03009_ch_G0000096;Parent=HG03009_ch_T0000265;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000265:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	9093387	9093389	.	+	0	source_transcript=hg002_chrY_paternal_192.2;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_172.2;transcript_id=HG03009_ch_T0000265;gene_id=HG03009_ch_G0000096;Parent=HG03009_ch_T0000265;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=stop_codon:HG03009_ch_T0000265;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9093420	9094113	.	+	.	source_transcript=hg002_chrY_paternal_192.2;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_172.2;transcript_id=HG03009_ch_T0000265;gene_id=HG03009_ch_G0000096;Parent=HG03009_ch_T0000265;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000265:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9094114	9094324	.	+	.	source_transcript=hg002_chrY_paternal_192.2;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_172.2;transcript_id=HG03009_ch_T0000265;gene_id=HG03009_ch_G0000096;Parent=HG03009_ch_T0000265;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000265:5;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	9091528	9094324	100	+	.	source_transcript=hg002_chrY_paternal_192.3;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_172.3;transcript_id=HG03009_ch_T0000266;gene_id=HG03009_ch_G0000096;Parent=HG03009_ch_G0000096;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=HG03009_ch_T0000266;Name=TSPY10
HG03009_chrY	CAT	exon	9091528	9092059	.	+	.	source_transcript=hg002_chrY_paternal_192.3;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_172.3;transcript_id=HG03009_ch_T0000266;gene_id=HG03009_ch_G0000096;Parent=HG03009_ch_T0000266;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000266:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9091574	9092059	.	+	0	source_transcript=hg002_chrY_paternal_192.3;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_172.3;transcript_id=HG03009_ch_T0000266;gene_id=HG03009_ch_G0000096;Parent=HG03009_ch_T0000266;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000266:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	9091574	9091576	.	+	0	source_transcript=hg002_chrY_paternal_192.3;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_172.3;transcript_id=HG03009_ch_T0000266;gene_id=HG03009_ch_G0000096;Parent=HG03009_ch_T0000266;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=start_codon:HG03009_ch_T0000266;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9092060	9092666	.	+	.	source_transcript=hg002_chrY_paternal_192.3;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_172.3;transcript_id=HG03009_ch_T0000266;gene_id=HG03009_ch_G0000096;Parent=HG03009_ch_T0000266;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000266:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9092667	9092744	.	+	.	source_transcript=hg002_chrY_paternal_192.3;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_172.3;transcript_id=HG03009_ch_T0000266;gene_id=HG03009_ch_G0000096;Parent=HG03009_ch_T0000266;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000266:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9092667	9092744	.	+	0	source_transcript=hg002_chrY_paternal_192.3;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_172.3;transcript_id=HG03009_ch_T0000266;gene_id=HG03009_ch_G0000096;Parent=HG03009_ch_T0000266;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000266:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9092745	9092872	.	+	.	source_transcript=hg002_chrY_paternal_192.3;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_172.3;transcript_id=HG03009_ch_T0000266;gene_id=HG03009_ch_G0000096;Parent=HG03009_ch_T0000266;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000266:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9092873	9092984	.	+	.	source_transcript=hg002_chrY_paternal_192.3;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_172.3;transcript_id=HG03009_ch_T0000266;gene_id=HG03009_ch_G0000096;Parent=HG03009_ch_T0000266;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000266:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9092873	9092984	.	+	0	source_transcript=hg002_chrY_paternal_192.3;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_172.3;transcript_id=HG03009_ch_T0000266;gene_id=HG03009_ch_G0000096;Parent=HG03009_ch_T0000266;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000266:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9092985	9093092	.	+	.	source_transcript=hg002_chrY_paternal_192.3;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_172.3;transcript_id=HG03009_ch_T0000266;gene_id=HG03009_ch_G0000096;Parent=HG03009_ch_T0000266;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000266:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9093093	9093231	.	+	.	source_transcript=hg002_chrY_paternal_192.3;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_172.3;transcript_id=HG03009_ch_T0000266;gene_id=HG03009_ch_G0000096;Parent=HG03009_ch_T0000266;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000266:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9093093	9093231	.	+	2	source_transcript=hg002_chrY_paternal_192.3;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_172.3;transcript_id=HG03009_ch_T0000266;gene_id=HG03009_ch_G0000096;Parent=HG03009_ch_T0000266;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000266:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9093232	9093337	.	+	.	source_transcript=hg002_chrY_paternal_192.3;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_172.3;transcript_id=HG03009_ch_T0000266;gene_id=HG03009_ch_G0000096;Parent=HG03009_ch_T0000266;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000266:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9093338	9093419	.	+	.	source_transcript=hg002_chrY_paternal_192.3;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_172.3;transcript_id=HG03009_ch_T0000266;gene_id=HG03009_ch_G0000096;Parent=HG03009_ch_T0000266;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000266:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9093338	9093389	.	+	1	source_transcript=hg002_chrY_paternal_192.3;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_172.3;transcript_id=HG03009_ch_T0000266;gene_id=HG03009_ch_G0000096;Parent=HG03009_ch_T0000266;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000266:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	9093387	9093389	.	+	0	source_transcript=hg002_chrY_paternal_192.3;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_172.3;transcript_id=HG03009_ch_T0000266;gene_id=HG03009_ch_G0000096;Parent=HG03009_ch_T0000266;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=stop_codon:HG03009_ch_T0000266;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9093420	9094113	.	+	.	source_transcript=hg002_chrY_paternal_192.3;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_172.3;transcript_id=HG03009_ch_T0000266;gene_id=HG03009_ch_G0000096;Parent=HG03009_ch_T0000266;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000266:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9094114	9094324	.	+	.	source_transcript=hg002_chrY_paternal_192.3;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_172.3;transcript_id=HG03009_ch_T0000266;gene_id=HG03009_ch_G0000096;Parent=HG03009_ch_T0000266;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000266:5;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	9091528	9094324	1000	+	.	source_transcript=hg002_chrY_paternal_192.4;source_transcript_name=hg002_chrY_paternal_192.1;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_192.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.4,hg002_chrY_paternal_172.4;transcript_id=HG03009_ch_T0000267;gene_id=HG03009_ch_G0000096;Parent=HG03009_ch_G0000096;transcript_name=hg002_chrY_paternal_192.1;gene_name=TSPY10;ID=HG03009_ch_T0000267;Name=TSPY10
HG03009_chrY	CAT	exon	9091528	9092059	.	+	.	source_transcript=hg002_chrY_paternal_192.4;source_transcript_name=hg002_chrY_paternal_192.1;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_192.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.4,hg002_chrY_paternal_172.4;transcript_id=HG03009_ch_T0000267;gene_id=HG03009_ch_G0000096;Parent=HG03009_ch_T0000267;transcript_name=hg002_chrY_paternal_192.1;gene_name=TSPY10;ID=exon:HG03009_ch_T0000267:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9092060	9092666	.	+	.	source_transcript=hg002_chrY_paternal_192.4;source_transcript_name=hg002_chrY_paternal_192.1;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_192.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.4,hg002_chrY_paternal_172.4;transcript_id=HG03009_ch_T0000267;gene_id=HG03009_ch_G0000096;Parent=HG03009_ch_T0000267;transcript_name=hg002_chrY_paternal_192.1;gene_name=TSPY10;ID=intron:HG03009_ch_T0000267:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9092667	9092744	.	+	.	source_transcript=hg002_chrY_paternal_192.4;source_transcript_name=hg002_chrY_paternal_192.1;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_192.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.4,hg002_chrY_paternal_172.4;transcript_id=HG03009_ch_T0000267;gene_id=HG03009_ch_G0000096;Parent=HG03009_ch_T0000267;transcript_name=hg002_chrY_paternal_192.1;gene_name=TSPY10;ID=exon:HG03009_ch_T0000267:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9092745	9092872	.	+	.	source_transcript=hg002_chrY_paternal_192.4;source_transcript_name=hg002_chrY_paternal_192.1;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_192.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.4,hg002_chrY_paternal_172.4;transcript_id=HG03009_ch_T0000267;gene_id=HG03009_ch_G0000096;Parent=HG03009_ch_T0000267;transcript_name=hg002_chrY_paternal_192.1;gene_name=TSPY10;ID=intron:HG03009_ch_T0000267:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9092873	9092984	.	+	.	source_transcript=hg002_chrY_paternal_192.4;source_transcript_name=hg002_chrY_paternal_192.1;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_192.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.4,hg002_chrY_paternal_172.4;transcript_id=HG03009_ch_T0000267;gene_id=HG03009_ch_G0000096;Parent=HG03009_ch_T0000267;transcript_name=hg002_chrY_paternal_192.1;gene_name=TSPY10;ID=exon:HG03009_ch_T0000267:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9092985	9093092	.	+	.	source_transcript=hg002_chrY_paternal_192.4;source_transcript_name=hg002_chrY_paternal_192.1;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_192.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.4,hg002_chrY_paternal_172.4;transcript_id=HG03009_ch_T0000267;gene_id=HG03009_ch_G0000096;Parent=HG03009_ch_T0000267;transcript_name=hg002_chrY_paternal_192.1;gene_name=TSPY10;ID=intron:HG03009_ch_T0000267:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9093093	9093231	.	+	.	source_transcript=hg002_chrY_paternal_192.4;source_transcript_name=hg002_chrY_paternal_192.1;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_192.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.4,hg002_chrY_paternal_172.4;transcript_id=HG03009_ch_T0000267;gene_id=HG03009_ch_G0000096;Parent=HG03009_ch_T0000267;transcript_name=hg002_chrY_paternal_192.1;gene_name=TSPY10;ID=exon:HG03009_ch_T0000267:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9093232	9093326	.	+	.	source_transcript=hg002_chrY_paternal_192.4;source_transcript_name=hg002_chrY_paternal_192.1;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_192.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.4,hg002_chrY_paternal_172.4;transcript_id=HG03009_ch_T0000267;gene_id=HG03009_ch_G0000096;Parent=HG03009_ch_T0000267;transcript_name=hg002_chrY_paternal_192.1;gene_name=TSPY10;ID=intron:HG03009_ch_T0000267:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9093327	9093419	.	+	.	source_transcript=hg002_chrY_paternal_192.4;source_transcript_name=hg002_chrY_paternal_192.1;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_192.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.4,hg002_chrY_paternal_172.4;transcript_id=HG03009_ch_T0000267;gene_id=HG03009_ch_G0000096;Parent=HG03009_ch_T0000267;transcript_name=hg002_chrY_paternal_192.1;gene_name=TSPY10;ID=exon:HG03009_ch_T0000267:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9093420	9094113	.	+	.	source_transcript=hg002_chrY_paternal_192.4;source_transcript_name=hg002_chrY_paternal_192.1;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_192.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.4,hg002_chrY_paternal_172.4;transcript_id=HG03009_ch_T0000267;gene_id=HG03009_ch_G0000096;Parent=HG03009_ch_T0000267;transcript_name=hg002_chrY_paternal_192.1;gene_name=TSPY10;ID=intron:HG03009_ch_T0000267:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9094114	9094324	.	+	.	source_transcript=hg002_chrY_paternal_192.4;source_transcript_name=hg002_chrY_paternal_192.1;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_192.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.4,hg002_chrY_paternal_172.4;transcript_id=HG03009_ch_T0000267;gene_id=HG03009_ch_G0000096;Parent=HG03009_ch_T0000267;transcript_name=hg002_chrY_paternal_192.1;gene_name=TSPY10;ID=exon:HG03009_ch_T0000267:5;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	9103585	9109267	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_193;alternative_source_transcripts=hg002_chrY_paternal_173.1,hg002_chrY_paternal_173.1;gene_id=HG03009_ch_G0000097;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=HG03009_ch_G0000097;Name=FAM197Y2
HG03009_chrY	CAT	transcript	9103585	9109267	1000	-	.	source_transcript=hg002_chrY_paternal_193.1;source_transcript_name=hg002_chrY_paternal_193.1;source_gene=hg002_chrY_paternal_193;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_193;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_193.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_193.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_173.1,hg002_chrY_paternal_173.1;transcript_id=HG03009_ch_T0000268;gene_id=HG03009_ch_G0000097;Parent=HG03009_ch_G0000097;transcript_name=hg002_chrY_paternal_193.1;gene_name=FAM197Y2;ID=HG03009_ch_T0000268;Name=FAM197Y2
HG03009_chrY	CAT	exon	9103585	9103644	.	-	.	source_transcript=hg002_chrY_paternal_193.1;source_transcript_name=hg002_chrY_paternal_193.1;source_gene=hg002_chrY_paternal_193;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_193;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_193.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_173.1,hg002_chrY_paternal_173.1;transcript_id=HG03009_ch_T0000268;gene_id=HG03009_ch_G0000097;Parent=HG03009_ch_T0000268;transcript_name=hg002_chrY_paternal_193.1;gene_name=FAM197Y2;ID=exon:HG03009_ch_T0000268:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9103645	9107193	.	-	.	source_transcript=hg002_chrY_paternal_193.1;source_transcript_name=hg002_chrY_paternal_193.1;source_gene=hg002_chrY_paternal_193;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_193;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_193.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_173.1,hg002_chrY_paternal_173.1;transcript_id=HG03009_ch_T0000268;gene_id=HG03009_ch_G0000097;Parent=HG03009_ch_T0000268;transcript_name=hg002_chrY_paternal_193.1;gene_name=FAM197Y2;ID=intron:HG03009_ch_T0000268:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9107194	9107352	.	-	.	source_transcript=hg002_chrY_paternal_193.1;source_transcript_name=hg002_chrY_paternal_193.1;source_gene=hg002_chrY_paternal_193;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_193;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_193.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_173.1,hg002_chrY_paternal_173.1;transcript_id=HG03009_ch_T0000268;gene_id=HG03009_ch_G0000097;Parent=HG03009_ch_T0000268;transcript_name=hg002_chrY_paternal_193.1;gene_name=FAM197Y2;ID=exon:HG03009_ch_T0000268:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9107353	9108844	.	-	.	source_transcript=hg002_chrY_paternal_193.1;source_transcript_name=hg002_chrY_paternal_193.1;source_gene=hg002_chrY_paternal_193;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_193;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_193.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_173.1,hg002_chrY_paternal_173.1;transcript_id=HG03009_ch_T0000268;gene_id=HG03009_ch_G0000097;Parent=HG03009_ch_T0000268;transcript_name=hg002_chrY_paternal_193.1;gene_name=FAM197Y2;ID=intron:HG03009_ch_T0000268:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9108845	9108990	.	-	.	source_transcript=hg002_chrY_paternal_193.1;source_transcript_name=hg002_chrY_paternal_193.1;source_gene=hg002_chrY_paternal_193;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_193;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_193.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_173.1,hg002_chrY_paternal_173.1;transcript_id=HG03009_ch_T0000268;gene_id=HG03009_ch_G0000097;Parent=HG03009_ch_T0000268;transcript_name=hg002_chrY_paternal_193.1;gene_name=FAM197Y2;ID=exon:HG03009_ch_T0000268:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9108991	9109076	.	-	.	source_transcript=hg002_chrY_paternal_193.1;source_transcript_name=hg002_chrY_paternal_193.1;source_gene=hg002_chrY_paternal_193;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_193;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_193.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_173.1,hg002_chrY_paternal_173.1;transcript_id=HG03009_ch_T0000268;gene_id=HG03009_ch_G0000097;Parent=HG03009_ch_T0000268;transcript_name=hg002_chrY_paternal_193.1;gene_name=FAM197Y2;ID=intron:HG03009_ch_T0000268:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9109077	9109267	.	-	.	source_transcript=hg002_chrY_paternal_193.1;source_transcript_name=hg002_chrY_paternal_193.1;source_gene=hg002_chrY_paternal_193;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_193;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_193.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_173.1,hg002_chrY_paternal_173.1;transcript_id=HG03009_ch_T0000268;gene_id=HG03009_ch_G0000097;Parent=HG03009_ch_T0000268;transcript_name=hg002_chrY_paternal_193.1;gene_name=FAM197Y2;ID=exon:HG03009_ch_T0000268:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	9111791	9114605	.	+	.	source_gene_common_name=TSPY4;source_gene=hg002_chrY_paternal_194;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_174.1;gene_id=HG03009_ch_G0000098;gene_biotype=protein_coding;gene_name=TSPY4;gene_sources=liftoff;ID=HG03009_ch_G0000098;Name=TSPY4
HG03009_chrY	CAT	transcript	9111791	9114605	100	+	.	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_174.1;transcript_id=HG03009_ch_T0000269;gene_id=HG03009_ch_G0000098;Parent=HG03009_ch_G0000098;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=HG03009_ch_T0000269;Name=TSPY4
HG03009_chrY	CAT	exon	9111791	9112340	.	+	.	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_174.1;transcript_id=HG03009_ch_T0000269;gene_id=HG03009_ch_G0000098;Parent=HG03009_ch_T0000269;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000269:0;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9111837	9112340	.	+	0	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_174.1;transcript_id=HG03009_ch_T0000269;gene_id=HG03009_ch_G0000098;Parent=HG03009_ch_T0000269;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:HG03009_ch_T0000269:0;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	9111837	9111839	.	+	0	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_174.1;transcript_id=HG03009_ch_T0000269;gene_id=HG03009_ch_G0000098;Parent=HG03009_ch_T0000269;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=start_codon:HG03009_ch_T0000269;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9112341	9112947	.	+	.	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_174.1;transcript_id=HG03009_ch_T0000269;gene_id=HG03009_ch_G0000098;Parent=HG03009_ch_T0000269;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=intron:HG03009_ch_T0000269:0;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9112948	9113025	.	+	.	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_174.1;transcript_id=HG03009_ch_T0000269;gene_id=HG03009_ch_G0000098;Parent=HG03009_ch_T0000269;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000269:1;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9112948	9113025	.	+	0	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_174.1;transcript_id=HG03009_ch_T0000269;gene_id=HG03009_ch_G0000098;Parent=HG03009_ch_T0000269;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:HG03009_ch_T0000269:1;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9113026	9113153	.	+	.	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_174.1;transcript_id=HG03009_ch_T0000269;gene_id=HG03009_ch_G0000098;Parent=HG03009_ch_T0000269;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=intron:HG03009_ch_T0000269:1;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9113154	9113265	.	+	.	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_174.1;transcript_id=HG03009_ch_T0000269;gene_id=HG03009_ch_G0000098;Parent=HG03009_ch_T0000269;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000269:2;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9113154	9113265	.	+	0	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_174.1;transcript_id=HG03009_ch_T0000269;gene_id=HG03009_ch_G0000098;Parent=HG03009_ch_T0000269;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:HG03009_ch_T0000269:2;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9113266	9113366	.	+	.	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_174.1;transcript_id=HG03009_ch_T0000269;gene_id=HG03009_ch_G0000098;Parent=HG03009_ch_T0000269;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=intron:HG03009_ch_T0000269:2;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9113367	9113512	.	+	.	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_174.1;transcript_id=HG03009_ch_T0000269;gene_id=HG03009_ch_G0000098;Parent=HG03009_ch_T0000269;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000269:3;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9113367	9113512	.	+	2	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_174.1;transcript_id=HG03009_ch_T0000269;gene_id=HG03009_ch_G0000098;Parent=HG03009_ch_T0000269;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:HG03009_ch_T0000269:3;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9113513	9113618	.	+	.	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_174.1;transcript_id=HG03009_ch_T0000269;gene_id=HG03009_ch_G0000098;Parent=HG03009_ch_T0000269;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=intron:HG03009_ch_T0000269:3;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9113619	9113700	.	+	.	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_174.1;transcript_id=HG03009_ch_T0000269;gene_id=HG03009_ch_G0000098;Parent=HG03009_ch_T0000269;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000269:4;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9113619	9113700	.	+	0	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_174.1;transcript_id=HG03009_ch_T0000269;gene_id=HG03009_ch_G0000098;Parent=HG03009_ch_T0000269;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:HG03009_ch_T0000269:4;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9113701	9114394	.	+	.	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_174.1;transcript_id=HG03009_ch_T0000269;gene_id=HG03009_ch_G0000098;Parent=HG03009_ch_T0000269;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=intron:HG03009_ch_T0000269:4;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9114395	9114605	.	+	.	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_174.1;transcript_id=HG03009_ch_T0000269;gene_id=HG03009_ch_G0000098;Parent=HG03009_ch_T0000269;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000269:5;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9114395	9114417	.	+	2	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_174.1;transcript_id=HG03009_ch_T0000269;gene_id=HG03009_ch_G0000098;Parent=HG03009_ch_T0000269;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:HG03009_ch_T0000269:5;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	9114415	9114417	.	+	0	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_174.1;transcript_id=HG03009_ch_T0000269;gene_id=HG03009_ch_G0000098;Parent=HG03009_ch_T0000269;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=stop_codon:HG03009_ch_T0000269;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	9111791	9114605	100	+	.	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_174.2;transcript_id=HG03009_ch_T0000270;gene_id=HG03009_ch_G0000098;Parent=HG03009_ch_G0000098;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=HG03009_ch_T0000270;Name=TSPY4
HG03009_chrY	CAT	exon	9111791	9112340	.	+	.	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_174.2;transcript_id=HG03009_ch_T0000270;gene_id=HG03009_ch_G0000098;Parent=HG03009_ch_T0000270;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000270:0;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9111837	9112340	.	+	0	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_174.2;transcript_id=HG03009_ch_T0000270;gene_id=HG03009_ch_G0000098;Parent=HG03009_ch_T0000270;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:HG03009_ch_T0000270:0;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	9111837	9111839	.	+	0	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_174.2;transcript_id=HG03009_ch_T0000270;gene_id=HG03009_ch_G0000098;Parent=HG03009_ch_T0000270;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=start_codon:HG03009_ch_T0000270;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9112341	9112947	.	+	.	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_174.2;transcript_id=HG03009_ch_T0000270;gene_id=HG03009_ch_G0000098;Parent=HG03009_ch_T0000270;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=intron:HG03009_ch_T0000270:0;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9112948	9113025	.	+	.	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_174.2;transcript_id=HG03009_ch_T0000270;gene_id=HG03009_ch_G0000098;Parent=HG03009_ch_T0000270;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000270:1;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9112948	9113025	.	+	0	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_174.2;transcript_id=HG03009_ch_T0000270;gene_id=HG03009_ch_G0000098;Parent=HG03009_ch_T0000270;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:HG03009_ch_T0000270:1;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9113026	9113153	.	+	.	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_174.2;transcript_id=HG03009_ch_T0000270;gene_id=HG03009_ch_G0000098;Parent=HG03009_ch_T0000270;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=intron:HG03009_ch_T0000270:1;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9113154	9113265	.	+	.	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_174.2;transcript_id=HG03009_ch_T0000270;gene_id=HG03009_ch_G0000098;Parent=HG03009_ch_T0000270;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000270:2;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9113154	9113265	.	+	0	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_174.2;transcript_id=HG03009_ch_T0000270;gene_id=HG03009_ch_G0000098;Parent=HG03009_ch_T0000270;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:HG03009_ch_T0000270:2;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9113266	9113366	.	+	.	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_174.2;transcript_id=HG03009_ch_T0000270;gene_id=HG03009_ch_G0000098;Parent=HG03009_ch_T0000270;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=intron:HG03009_ch_T0000270:2;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9113367	9113512	.	+	.	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_174.2;transcript_id=HG03009_ch_T0000270;gene_id=HG03009_ch_G0000098;Parent=HG03009_ch_T0000270;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000270:3;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9113367	9113512	.	+	2	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_174.2;transcript_id=HG03009_ch_T0000270;gene_id=HG03009_ch_G0000098;Parent=HG03009_ch_T0000270;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:HG03009_ch_T0000270:3;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9113513	9113607	.	+	.	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_174.2;transcript_id=HG03009_ch_T0000270;gene_id=HG03009_ch_G0000098;Parent=HG03009_ch_T0000270;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=intron:HG03009_ch_T0000270:3;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9113608	9113700	.	+	.	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_174.2;transcript_id=HG03009_ch_T0000270;gene_id=HG03009_ch_G0000098;Parent=HG03009_ch_T0000270;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000270:4;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9113608	9113670	.	+	0	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_174.2;transcript_id=HG03009_ch_T0000270;gene_id=HG03009_ch_G0000098;Parent=HG03009_ch_T0000270;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:HG03009_ch_T0000270:4;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	9113668	9113670	.	+	0	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_174.2;transcript_id=HG03009_ch_T0000270;gene_id=HG03009_ch_G0000098;Parent=HG03009_ch_T0000270;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=stop_codon:HG03009_ch_T0000270;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9113701	9114394	.	+	.	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_174.2;transcript_id=HG03009_ch_T0000270;gene_id=HG03009_ch_G0000098;Parent=HG03009_ch_T0000270;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=intron:HG03009_ch_T0000270:4;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9114395	9114605	.	+	.	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_174.2;transcript_id=HG03009_ch_T0000270;gene_id=HG03009_ch_G0000098;Parent=HG03009_ch_T0000270;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000270:5;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	9111791	9114605	100	+	.	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_174.3;transcript_id=HG03009_ch_T0000271;gene_id=HG03009_ch_G0000098;Parent=HG03009_ch_G0000098;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=HG03009_ch_T0000271;Name=TSPY4
HG03009_chrY	CAT	exon	9111791	9112340	.	+	.	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_174.3;transcript_id=HG03009_ch_T0000271;gene_id=HG03009_ch_G0000098;Parent=HG03009_ch_T0000271;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000271:0;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9111837	9112340	.	+	0	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_174.3;transcript_id=HG03009_ch_T0000271;gene_id=HG03009_ch_G0000098;Parent=HG03009_ch_T0000271;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:HG03009_ch_T0000271:0;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	9111837	9111839	.	+	0	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_174.3;transcript_id=HG03009_ch_T0000271;gene_id=HG03009_ch_G0000098;Parent=HG03009_ch_T0000271;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=start_codon:HG03009_ch_T0000271;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9112341	9112947	.	+	.	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_174.3;transcript_id=HG03009_ch_T0000271;gene_id=HG03009_ch_G0000098;Parent=HG03009_ch_T0000271;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=intron:HG03009_ch_T0000271:0;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9112948	9113025	.	+	.	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_174.3;transcript_id=HG03009_ch_T0000271;gene_id=HG03009_ch_G0000098;Parent=HG03009_ch_T0000271;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000271:1;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9112948	9113025	.	+	0	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_174.3;transcript_id=HG03009_ch_T0000271;gene_id=HG03009_ch_G0000098;Parent=HG03009_ch_T0000271;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:HG03009_ch_T0000271:1;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9113026	9113153	.	+	.	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_174.3;transcript_id=HG03009_ch_T0000271;gene_id=HG03009_ch_G0000098;Parent=HG03009_ch_T0000271;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=intron:HG03009_ch_T0000271:1;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9113154	9113265	.	+	.	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_174.3;transcript_id=HG03009_ch_T0000271;gene_id=HG03009_ch_G0000098;Parent=HG03009_ch_T0000271;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000271:2;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9113154	9113265	.	+	0	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_174.3;transcript_id=HG03009_ch_T0000271;gene_id=HG03009_ch_G0000098;Parent=HG03009_ch_T0000271;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:HG03009_ch_T0000271:2;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9113266	9113373	.	+	.	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_174.3;transcript_id=HG03009_ch_T0000271;gene_id=HG03009_ch_G0000098;Parent=HG03009_ch_T0000271;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=intron:HG03009_ch_T0000271:2;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9113374	9113512	.	+	.	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_174.3;transcript_id=HG03009_ch_T0000271;gene_id=HG03009_ch_G0000098;Parent=HG03009_ch_T0000271;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000271:3;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9113374	9113512	.	+	2	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_174.3;transcript_id=HG03009_ch_T0000271;gene_id=HG03009_ch_G0000098;Parent=HG03009_ch_T0000271;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:HG03009_ch_T0000271:3;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9113513	9113618	.	+	.	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_174.3;transcript_id=HG03009_ch_T0000271;gene_id=HG03009_ch_G0000098;Parent=HG03009_ch_T0000271;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=intron:HG03009_ch_T0000271:3;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9113619	9113700	.	+	.	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_174.3;transcript_id=HG03009_ch_T0000271;gene_id=HG03009_ch_G0000098;Parent=HG03009_ch_T0000271;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000271:4;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9113619	9113670	.	+	1	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_174.3;transcript_id=HG03009_ch_T0000271;gene_id=HG03009_ch_G0000098;Parent=HG03009_ch_T0000271;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:HG03009_ch_T0000271:4;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	9113668	9113670	.	+	0	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_174.3;transcript_id=HG03009_ch_T0000271;gene_id=HG03009_ch_G0000098;Parent=HG03009_ch_T0000271;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=stop_codon:HG03009_ch_T0000271;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9113701	9114394	.	+	.	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_174.3;transcript_id=HG03009_ch_T0000271;gene_id=HG03009_ch_G0000098;Parent=HG03009_ch_T0000271;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=intron:HG03009_ch_T0000271:4;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9114395	9114605	.	+	.	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_174.3;transcript_id=HG03009_ch_T0000271;gene_id=HG03009_ch_G0000098;Parent=HG03009_ch_T0000271;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000271:5;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	9111791	9114605	1000	+	.	source_transcript=hg002_chrY_paternal_194.4;source_transcript_name=hg002_chrY_paternal_194.1;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_194.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.4,hg002_chrY_paternal_174.4;transcript_id=HG03009_ch_T0000272;gene_id=HG03009_ch_G0000098;Parent=HG03009_ch_G0000098;transcript_name=hg002_chrY_paternal_194.1;gene_name=TSPY4;ID=HG03009_ch_T0000272;Name=TSPY4
HG03009_chrY	CAT	exon	9111791	9112340	.	+	.	source_transcript=hg002_chrY_paternal_194.4;source_transcript_name=hg002_chrY_paternal_194.1;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_194.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.4,hg002_chrY_paternal_174.4;transcript_id=HG03009_ch_T0000272;gene_id=HG03009_ch_G0000098;Parent=HG03009_ch_T0000272;transcript_name=hg002_chrY_paternal_194.1;gene_name=TSPY4;ID=exon:HG03009_ch_T0000272:0;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9112341	9112947	.	+	.	source_transcript=hg002_chrY_paternal_194.4;source_transcript_name=hg002_chrY_paternal_194.1;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_194.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.4,hg002_chrY_paternal_174.4;transcript_id=HG03009_ch_T0000272;gene_id=HG03009_ch_G0000098;Parent=HG03009_ch_T0000272;transcript_name=hg002_chrY_paternal_194.1;gene_name=TSPY4;ID=intron:HG03009_ch_T0000272:0;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9112948	9113025	.	+	.	source_transcript=hg002_chrY_paternal_194.4;source_transcript_name=hg002_chrY_paternal_194.1;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_194.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.4,hg002_chrY_paternal_174.4;transcript_id=HG03009_ch_T0000272;gene_id=HG03009_ch_G0000098;Parent=HG03009_ch_T0000272;transcript_name=hg002_chrY_paternal_194.1;gene_name=TSPY4;ID=exon:HG03009_ch_T0000272:1;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9113026	9113153	.	+	.	source_transcript=hg002_chrY_paternal_194.4;source_transcript_name=hg002_chrY_paternal_194.1;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_194.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.4,hg002_chrY_paternal_174.4;transcript_id=HG03009_ch_T0000272;gene_id=HG03009_ch_G0000098;Parent=HG03009_ch_T0000272;transcript_name=hg002_chrY_paternal_194.1;gene_name=TSPY4;ID=intron:HG03009_ch_T0000272:1;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9113154	9113265	.	+	.	source_transcript=hg002_chrY_paternal_194.4;source_transcript_name=hg002_chrY_paternal_194.1;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_194.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.4,hg002_chrY_paternal_174.4;transcript_id=HG03009_ch_T0000272;gene_id=HG03009_ch_G0000098;Parent=HG03009_ch_T0000272;transcript_name=hg002_chrY_paternal_194.1;gene_name=TSPY4;ID=exon:HG03009_ch_T0000272:2;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9113266	9113373	.	+	.	source_transcript=hg002_chrY_paternal_194.4;source_transcript_name=hg002_chrY_paternal_194.1;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_194.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.4,hg002_chrY_paternal_174.4;transcript_id=HG03009_ch_T0000272;gene_id=HG03009_ch_G0000098;Parent=HG03009_ch_T0000272;transcript_name=hg002_chrY_paternal_194.1;gene_name=TSPY4;ID=intron:HG03009_ch_T0000272:2;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9113374	9113512	.	+	.	source_transcript=hg002_chrY_paternal_194.4;source_transcript_name=hg002_chrY_paternal_194.1;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_194.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.4,hg002_chrY_paternal_174.4;transcript_id=HG03009_ch_T0000272;gene_id=HG03009_ch_G0000098;Parent=HG03009_ch_T0000272;transcript_name=hg002_chrY_paternal_194.1;gene_name=TSPY4;ID=exon:HG03009_ch_T0000272:3;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9113513	9113607	.	+	.	source_transcript=hg002_chrY_paternal_194.4;source_transcript_name=hg002_chrY_paternal_194.1;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_194.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.4,hg002_chrY_paternal_174.4;transcript_id=HG03009_ch_T0000272;gene_id=HG03009_ch_G0000098;Parent=HG03009_ch_T0000272;transcript_name=hg002_chrY_paternal_194.1;gene_name=TSPY4;ID=intron:HG03009_ch_T0000272:3;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9113608	9113700	.	+	.	source_transcript=hg002_chrY_paternal_194.4;source_transcript_name=hg002_chrY_paternal_194.1;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_194.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.4,hg002_chrY_paternal_174.4;transcript_id=HG03009_ch_T0000272;gene_id=HG03009_ch_G0000098;Parent=HG03009_ch_T0000272;transcript_name=hg002_chrY_paternal_194.1;gene_name=TSPY4;ID=exon:HG03009_ch_T0000272:4;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9113701	9114394	.	+	.	source_transcript=hg002_chrY_paternal_194.4;source_transcript_name=hg002_chrY_paternal_194.1;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_194.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.4,hg002_chrY_paternal_174.4;transcript_id=HG03009_ch_T0000272;gene_id=HG03009_ch_G0000098;Parent=HG03009_ch_T0000272;transcript_name=hg002_chrY_paternal_194.1;gene_name=TSPY4;ID=intron:HG03009_ch_T0000272:4;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9114395	9114605	.	+	.	source_transcript=hg002_chrY_paternal_194.4;source_transcript_name=hg002_chrY_paternal_194.1;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_194.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.4,hg002_chrY_paternal_174.4;transcript_id=HG03009_ch_T0000272;gene_id=HG03009_ch_G0000098;Parent=HG03009_ch_T0000272;transcript_name=hg002_chrY_paternal_194.1;gene_name=TSPY4;ID=exon:HG03009_ch_T0000272:5;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	9123881	9129576	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_195;alternative_source_transcripts=hg002_chrY_paternal_175.1,hg002_chrY_paternal_175.1;gene_id=HG03009_ch_G0000099;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=HG03009_ch_G0000099;Name=FAM197Y2
HG03009_chrY	CAT	transcript	9123881	9129576	1000	-	.	source_transcript=hg002_chrY_paternal_195.1;source_transcript_name=hg002_chrY_paternal_195.1;source_gene=hg002_chrY_paternal_195;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_195;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_195.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_195.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_175.1,hg002_chrY_paternal_175.1;transcript_id=HG03009_ch_T0000273;gene_id=HG03009_ch_G0000099;Parent=HG03009_ch_G0000099;transcript_name=hg002_chrY_paternal_195.1;gene_name=FAM197Y2;ID=HG03009_ch_T0000273;Name=FAM197Y2
HG03009_chrY	CAT	exon	9123881	9123940	.	-	.	source_transcript=hg002_chrY_paternal_195.1;source_transcript_name=hg002_chrY_paternal_195.1;source_gene=hg002_chrY_paternal_195;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_195;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_195.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_195.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_175.1,hg002_chrY_paternal_175.1;transcript_id=HG03009_ch_T0000273;gene_id=HG03009_ch_G0000099;Parent=HG03009_ch_T0000273;transcript_name=hg002_chrY_paternal_195.1;gene_name=FAM197Y2;ID=exon:HG03009_ch_T0000273:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9123941	9127494	.	-	.	source_transcript=hg002_chrY_paternal_195.1;source_transcript_name=hg002_chrY_paternal_195.1;source_gene=hg002_chrY_paternal_195;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_195;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_195.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_195.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_175.1,hg002_chrY_paternal_175.1;transcript_id=HG03009_ch_T0000273;gene_id=HG03009_ch_G0000099;Parent=HG03009_ch_T0000273;transcript_name=hg002_chrY_paternal_195.1;gene_name=FAM197Y2;ID=intron:HG03009_ch_T0000273:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9127495	9127653	.	-	.	source_transcript=hg002_chrY_paternal_195.1;source_transcript_name=hg002_chrY_paternal_195.1;source_gene=hg002_chrY_paternal_195;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_195;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_195.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_195.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_175.1,hg002_chrY_paternal_175.1;transcript_id=HG03009_ch_T0000273;gene_id=HG03009_ch_G0000099;Parent=HG03009_ch_T0000273;transcript_name=hg002_chrY_paternal_195.1;gene_name=FAM197Y2;ID=exon:HG03009_ch_T0000273:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9127654	9129153	.	-	.	source_transcript=hg002_chrY_paternal_195.1;source_transcript_name=hg002_chrY_paternal_195.1;source_gene=hg002_chrY_paternal_195;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_195;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_195.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_195.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_175.1,hg002_chrY_paternal_175.1;transcript_id=HG03009_ch_T0000273;gene_id=HG03009_ch_G0000099;Parent=HG03009_ch_T0000273;transcript_name=hg002_chrY_paternal_195.1;gene_name=FAM197Y2;ID=intron:HG03009_ch_T0000273:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9129154	9129299	.	-	.	source_transcript=hg002_chrY_paternal_195.1;source_transcript_name=hg002_chrY_paternal_195.1;source_gene=hg002_chrY_paternal_195;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_195;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_195.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_195.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_175.1,hg002_chrY_paternal_175.1;transcript_id=HG03009_ch_T0000273;gene_id=HG03009_ch_G0000099;Parent=HG03009_ch_T0000273;transcript_name=hg002_chrY_paternal_195.1;gene_name=FAM197Y2;ID=exon:HG03009_ch_T0000273:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9129300	9129385	.	-	.	source_transcript=hg002_chrY_paternal_195.1;source_transcript_name=hg002_chrY_paternal_195.1;source_gene=hg002_chrY_paternal_195;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_195;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_195.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_195.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_175.1,hg002_chrY_paternal_175.1;transcript_id=HG03009_ch_T0000273;gene_id=HG03009_ch_G0000099;Parent=HG03009_ch_T0000273;transcript_name=hg002_chrY_paternal_195.1;gene_name=FAM197Y2;ID=intron:HG03009_ch_T0000273:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9129386	9129576	.	-	.	source_transcript=hg002_chrY_paternal_195.1;source_transcript_name=hg002_chrY_paternal_195.1;source_gene=hg002_chrY_paternal_195;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_195;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_195.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_195.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_175.1,hg002_chrY_paternal_175.1;transcript_id=HG03009_ch_T0000273;gene_id=HG03009_ch_G0000099;Parent=HG03009_ch_T0000273;transcript_name=hg002_chrY_paternal_195.1;gene_name=FAM197Y2;ID=exon:HG03009_ch_T0000273:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	9132102	9134916	.	+	.	source_gene_common_name=TSPY4;source_gene=hg002_chrY_paternal_174;alternative_source_transcripts=hg002_chrY_paternal_176.1,hg002_chrY_paternal_176.1;gene_id=HG03009_ch_G0000100;gene_biotype=protein_coding;gene_name=TSPY4;gene_sources=liftoff,augTM;ID=HG03009_ch_G0000100;Name=TSPY4
HG03009_chrY	CAT	transcript	9132102	9134916	100	+	.	source_transcript=hg002_chrY_paternal_174.1;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.1,hg002_chrY_paternal_176.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000274;gene_id=HG03009_ch_G0000100;Parent=HG03009_ch_G0000100;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=HG03009_ch_T0000274;Name=TSPY4
HG03009_chrY	CAT	exon	9132102	9132651	.	+	.	source_transcript=hg002_chrY_paternal_174.1;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.1,hg002_chrY_paternal_176.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000274;gene_id=HG03009_ch_G0000100;Parent=HG03009_ch_T0000274;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000274:0;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9132148	9132651	.	+	0	source_transcript=hg002_chrY_paternal_174.1;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.1,hg002_chrY_paternal_176.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000274;gene_id=HG03009_ch_G0000100;Parent=HG03009_ch_T0000274;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=CDS:HG03009_ch_T0000274:0;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	9132148	9132150	.	+	0	source_transcript=hg002_chrY_paternal_174.1;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.1,hg002_chrY_paternal_176.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000274;gene_id=HG03009_ch_G0000100;Parent=HG03009_ch_T0000274;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=start_codon:HG03009_ch_T0000274;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9132652	9133258	.	+	.	source_transcript=hg002_chrY_paternal_174.1;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.1,hg002_chrY_paternal_176.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000274;gene_id=HG03009_ch_G0000100;Parent=HG03009_ch_T0000274;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=intron:HG03009_ch_T0000274:0;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9133259	9133336	.	+	.	source_transcript=hg002_chrY_paternal_174.1;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.1,hg002_chrY_paternal_176.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000274;gene_id=HG03009_ch_G0000100;Parent=HG03009_ch_T0000274;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000274:1;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9133259	9133336	.	+	0	source_transcript=hg002_chrY_paternal_174.1;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.1,hg002_chrY_paternal_176.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000274;gene_id=HG03009_ch_G0000100;Parent=HG03009_ch_T0000274;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=CDS:HG03009_ch_T0000274:1;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9133337	9133464	.	+	.	source_transcript=hg002_chrY_paternal_174.1;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.1,hg002_chrY_paternal_176.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000274;gene_id=HG03009_ch_G0000100;Parent=HG03009_ch_T0000274;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=intron:HG03009_ch_T0000274:1;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9133465	9133576	.	+	.	source_transcript=hg002_chrY_paternal_174.1;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.1,hg002_chrY_paternal_176.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000274;gene_id=HG03009_ch_G0000100;Parent=HG03009_ch_T0000274;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000274:2;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9133465	9133576	.	+	0	source_transcript=hg002_chrY_paternal_174.1;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.1,hg002_chrY_paternal_176.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000274;gene_id=HG03009_ch_G0000100;Parent=HG03009_ch_T0000274;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=CDS:HG03009_ch_T0000274:2;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9133577	9133677	.	+	.	source_transcript=hg002_chrY_paternal_174.1;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.1,hg002_chrY_paternal_176.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000274;gene_id=HG03009_ch_G0000100;Parent=HG03009_ch_T0000274;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=intron:HG03009_ch_T0000274:2;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9133678	9133823	.	+	.	source_transcript=hg002_chrY_paternal_174.1;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.1,hg002_chrY_paternal_176.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000274;gene_id=HG03009_ch_G0000100;Parent=HG03009_ch_T0000274;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000274:3;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9133678	9133823	.	+	2	source_transcript=hg002_chrY_paternal_174.1;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.1,hg002_chrY_paternal_176.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000274;gene_id=HG03009_ch_G0000100;Parent=HG03009_ch_T0000274;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=CDS:HG03009_ch_T0000274:3;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9133824	9133929	.	+	.	source_transcript=hg002_chrY_paternal_174.1;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.1,hg002_chrY_paternal_176.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000274;gene_id=HG03009_ch_G0000100;Parent=HG03009_ch_T0000274;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=intron:HG03009_ch_T0000274:3;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9133930	9134011	.	+	.	source_transcript=hg002_chrY_paternal_174.1;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.1,hg002_chrY_paternal_176.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000274;gene_id=HG03009_ch_G0000100;Parent=HG03009_ch_T0000274;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000274:4;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9133930	9134011	.	+	0	source_transcript=hg002_chrY_paternal_174.1;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.1,hg002_chrY_paternal_176.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000274;gene_id=HG03009_ch_G0000100;Parent=HG03009_ch_T0000274;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=CDS:HG03009_ch_T0000274:4;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9134012	9134705	.	+	.	source_transcript=hg002_chrY_paternal_174.1;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.1,hg002_chrY_paternal_176.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000274;gene_id=HG03009_ch_G0000100;Parent=HG03009_ch_T0000274;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=intron:HG03009_ch_T0000274:4;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9134706	9134916	.	+	.	source_transcript=hg002_chrY_paternal_174.1;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.1,hg002_chrY_paternal_176.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000274;gene_id=HG03009_ch_G0000100;Parent=HG03009_ch_T0000274;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000274:5;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9134706	9134728	.	+	2	source_transcript=hg002_chrY_paternal_174.1;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.1,hg002_chrY_paternal_176.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000274;gene_id=HG03009_ch_G0000100;Parent=HG03009_ch_T0000274;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=CDS:HG03009_ch_T0000274:5;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	9134726	9134728	.	+	0	source_transcript=hg002_chrY_paternal_174.1;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.1,hg002_chrY_paternal_176.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000274;gene_id=HG03009_ch_G0000100;Parent=HG03009_ch_T0000274;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=stop_codon:HG03009_ch_T0000274;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	9132102	9134916	100	+	.	source_transcript=hg002_chrY_paternal_174.2;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.2,hg002_chrY_paternal_176.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000275;gene_id=HG03009_ch_G0000100;Parent=HG03009_ch_G0000100;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=HG03009_ch_T0000275;Name=TSPY4
HG03009_chrY	CAT	exon	9132102	9132651	.	+	.	source_transcript=hg002_chrY_paternal_174.2;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.2,hg002_chrY_paternal_176.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000275;gene_id=HG03009_ch_G0000100;Parent=HG03009_ch_T0000275;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000275:0;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9132148	9132651	.	+	0	source_transcript=hg002_chrY_paternal_174.2;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.2,hg002_chrY_paternal_176.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000275;gene_id=HG03009_ch_G0000100;Parent=HG03009_ch_T0000275;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=CDS:HG03009_ch_T0000275:0;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	9132148	9132150	.	+	0	source_transcript=hg002_chrY_paternal_174.2;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.2,hg002_chrY_paternal_176.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000275;gene_id=HG03009_ch_G0000100;Parent=HG03009_ch_T0000275;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=start_codon:HG03009_ch_T0000275;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9132652	9133258	.	+	.	source_transcript=hg002_chrY_paternal_174.2;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.2,hg002_chrY_paternal_176.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000275;gene_id=HG03009_ch_G0000100;Parent=HG03009_ch_T0000275;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=intron:HG03009_ch_T0000275:0;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9133259	9133336	.	+	.	source_transcript=hg002_chrY_paternal_174.2;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.2,hg002_chrY_paternal_176.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000275;gene_id=HG03009_ch_G0000100;Parent=HG03009_ch_T0000275;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000275:1;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9133259	9133336	.	+	0	source_transcript=hg002_chrY_paternal_174.2;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.2,hg002_chrY_paternal_176.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000275;gene_id=HG03009_ch_G0000100;Parent=HG03009_ch_T0000275;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=CDS:HG03009_ch_T0000275:1;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9133337	9133464	.	+	.	source_transcript=hg002_chrY_paternal_174.2;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.2,hg002_chrY_paternal_176.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000275;gene_id=HG03009_ch_G0000100;Parent=HG03009_ch_T0000275;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=intron:HG03009_ch_T0000275:1;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9133465	9133576	.	+	.	source_transcript=hg002_chrY_paternal_174.2;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.2,hg002_chrY_paternal_176.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000275;gene_id=HG03009_ch_G0000100;Parent=HG03009_ch_T0000275;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000275:2;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9133465	9133576	.	+	0	source_transcript=hg002_chrY_paternal_174.2;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.2,hg002_chrY_paternal_176.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000275;gene_id=HG03009_ch_G0000100;Parent=HG03009_ch_T0000275;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=CDS:HG03009_ch_T0000275:2;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9133577	9133677	.	+	.	source_transcript=hg002_chrY_paternal_174.2;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.2,hg002_chrY_paternal_176.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000275;gene_id=HG03009_ch_G0000100;Parent=HG03009_ch_T0000275;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=intron:HG03009_ch_T0000275:2;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9133678	9133823	.	+	.	source_transcript=hg002_chrY_paternal_174.2;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.2,hg002_chrY_paternal_176.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000275;gene_id=HG03009_ch_G0000100;Parent=HG03009_ch_T0000275;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000275:3;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9133678	9133823	.	+	2	source_transcript=hg002_chrY_paternal_174.2;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.2,hg002_chrY_paternal_176.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000275;gene_id=HG03009_ch_G0000100;Parent=HG03009_ch_T0000275;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=CDS:HG03009_ch_T0000275:3;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9133824	9133918	.	+	.	source_transcript=hg002_chrY_paternal_174.2;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.2,hg002_chrY_paternal_176.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000275;gene_id=HG03009_ch_G0000100;Parent=HG03009_ch_T0000275;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=intron:HG03009_ch_T0000275:3;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9133919	9134011	.	+	.	source_transcript=hg002_chrY_paternal_174.2;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.2,hg002_chrY_paternal_176.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000275;gene_id=HG03009_ch_G0000100;Parent=HG03009_ch_T0000275;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000275:4;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9133919	9133981	.	+	0	source_transcript=hg002_chrY_paternal_174.2;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.2,hg002_chrY_paternal_176.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000275;gene_id=HG03009_ch_G0000100;Parent=HG03009_ch_T0000275;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=CDS:HG03009_ch_T0000275:4;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	9133979	9133981	.	+	0	source_transcript=hg002_chrY_paternal_174.2;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.2,hg002_chrY_paternal_176.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000275;gene_id=HG03009_ch_G0000100;Parent=HG03009_ch_T0000275;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=stop_codon:HG03009_ch_T0000275;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9134012	9134705	.	+	.	source_transcript=hg002_chrY_paternal_174.2;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.2,hg002_chrY_paternal_176.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000275;gene_id=HG03009_ch_G0000100;Parent=HG03009_ch_T0000275;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=intron:HG03009_ch_T0000275:4;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9134706	9134916	.	+	.	source_transcript=hg002_chrY_paternal_174.2;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.2,hg002_chrY_paternal_176.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000275;gene_id=HG03009_ch_G0000100;Parent=HG03009_ch_T0000275;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000275:5;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	9132102	9134916	100	+	.	source_transcript=hg002_chrY_paternal_174.3;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.3,hg002_chrY_paternal_176.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000276;gene_id=HG03009_ch_G0000100;Parent=HG03009_ch_G0000100;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=HG03009_ch_T0000276;Name=TSPY4
HG03009_chrY	CAT	exon	9132102	9132651	.	+	.	source_transcript=hg002_chrY_paternal_174.3;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.3,hg002_chrY_paternal_176.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000276;gene_id=HG03009_ch_G0000100;Parent=HG03009_ch_T0000276;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000276:0;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9132148	9132651	.	+	0	source_transcript=hg002_chrY_paternal_174.3;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.3,hg002_chrY_paternal_176.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000276;gene_id=HG03009_ch_G0000100;Parent=HG03009_ch_T0000276;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=CDS:HG03009_ch_T0000276:0;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	9132148	9132150	.	+	0	source_transcript=hg002_chrY_paternal_174.3;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.3,hg002_chrY_paternal_176.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000276;gene_id=HG03009_ch_G0000100;Parent=HG03009_ch_T0000276;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=start_codon:HG03009_ch_T0000276;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9132652	9133258	.	+	.	source_transcript=hg002_chrY_paternal_174.3;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.3,hg002_chrY_paternal_176.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000276;gene_id=HG03009_ch_G0000100;Parent=HG03009_ch_T0000276;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=intron:HG03009_ch_T0000276:0;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9133259	9133336	.	+	.	source_transcript=hg002_chrY_paternal_174.3;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.3,hg002_chrY_paternal_176.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000276;gene_id=HG03009_ch_G0000100;Parent=HG03009_ch_T0000276;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000276:1;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9133259	9133336	.	+	0	source_transcript=hg002_chrY_paternal_174.3;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.3,hg002_chrY_paternal_176.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000276;gene_id=HG03009_ch_G0000100;Parent=HG03009_ch_T0000276;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=CDS:HG03009_ch_T0000276:1;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9133337	9133464	.	+	.	source_transcript=hg002_chrY_paternal_174.3;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.3,hg002_chrY_paternal_176.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000276;gene_id=HG03009_ch_G0000100;Parent=HG03009_ch_T0000276;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=intron:HG03009_ch_T0000276:1;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9133465	9133576	.	+	.	source_transcript=hg002_chrY_paternal_174.3;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.3,hg002_chrY_paternal_176.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000276;gene_id=HG03009_ch_G0000100;Parent=HG03009_ch_T0000276;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000276:2;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9133465	9133576	.	+	0	source_transcript=hg002_chrY_paternal_174.3;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.3,hg002_chrY_paternal_176.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000276;gene_id=HG03009_ch_G0000100;Parent=HG03009_ch_T0000276;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=CDS:HG03009_ch_T0000276:2;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9133577	9133684	.	+	.	source_transcript=hg002_chrY_paternal_174.3;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.3,hg002_chrY_paternal_176.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000276;gene_id=HG03009_ch_G0000100;Parent=HG03009_ch_T0000276;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=intron:HG03009_ch_T0000276:2;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9133685	9133823	.	+	.	source_transcript=hg002_chrY_paternal_174.3;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.3,hg002_chrY_paternal_176.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000276;gene_id=HG03009_ch_G0000100;Parent=HG03009_ch_T0000276;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000276:3;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9133685	9133823	.	+	2	source_transcript=hg002_chrY_paternal_174.3;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.3,hg002_chrY_paternal_176.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000276;gene_id=HG03009_ch_G0000100;Parent=HG03009_ch_T0000276;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=CDS:HG03009_ch_T0000276:3;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9133824	9133929	.	+	.	source_transcript=hg002_chrY_paternal_174.3;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.3,hg002_chrY_paternal_176.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000276;gene_id=HG03009_ch_G0000100;Parent=HG03009_ch_T0000276;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=intron:HG03009_ch_T0000276:3;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9133930	9134011	.	+	.	source_transcript=hg002_chrY_paternal_174.3;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.3,hg002_chrY_paternal_176.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000276;gene_id=HG03009_ch_G0000100;Parent=HG03009_ch_T0000276;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000276:4;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9133930	9133981	.	+	1	source_transcript=hg002_chrY_paternal_174.3;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.3,hg002_chrY_paternal_176.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000276;gene_id=HG03009_ch_G0000100;Parent=HG03009_ch_T0000276;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=CDS:HG03009_ch_T0000276:4;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	9133979	9133981	.	+	0	source_transcript=hg002_chrY_paternal_174.3;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.3,hg002_chrY_paternal_176.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000276;gene_id=HG03009_ch_G0000100;Parent=HG03009_ch_T0000276;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=stop_codon:HG03009_ch_T0000276;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9134012	9134705	.	+	.	source_transcript=hg002_chrY_paternal_174.3;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.3,hg002_chrY_paternal_176.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000276;gene_id=HG03009_ch_G0000100;Parent=HG03009_ch_T0000276;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=intron:HG03009_ch_T0000276:4;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9134706	9134916	.	+	.	source_transcript=hg002_chrY_paternal_174.3;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.3,hg002_chrY_paternal_176.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000276;gene_id=HG03009_ch_G0000100;Parent=HG03009_ch_T0000276;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000276:5;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	9132102	9134916	1000	+	.	source_transcript=hg002_chrY_paternal_174.4;source_transcript_name=hg002_chrY_paternal_174.1;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_174.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.4,hg002_chrY_paternal_176.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000277;gene_id=HG03009_ch_G0000100;Parent=HG03009_ch_G0000100;transcript_name=hg002_chrY_paternal_174.1;gene_name=TSPY4;ID=HG03009_ch_T0000277;Name=TSPY4
HG03009_chrY	CAT	exon	9132102	9132651	.	+	.	source_transcript=hg002_chrY_paternal_174.4;source_transcript_name=hg002_chrY_paternal_174.1;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_174.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.4,hg002_chrY_paternal_176.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000277;gene_id=HG03009_ch_G0000100;Parent=HG03009_ch_T0000277;transcript_name=hg002_chrY_paternal_174.1;gene_name=TSPY4;ID=exon:HG03009_ch_T0000277:0;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9132652	9133258	.	+	.	source_transcript=hg002_chrY_paternal_174.4;source_transcript_name=hg002_chrY_paternal_174.1;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_174.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.4,hg002_chrY_paternal_176.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000277;gene_id=HG03009_ch_G0000100;Parent=HG03009_ch_T0000277;transcript_name=hg002_chrY_paternal_174.1;gene_name=TSPY4;ID=intron:HG03009_ch_T0000277:0;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9133259	9133336	.	+	.	source_transcript=hg002_chrY_paternal_174.4;source_transcript_name=hg002_chrY_paternal_174.1;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_174.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.4,hg002_chrY_paternal_176.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000277;gene_id=HG03009_ch_G0000100;Parent=HG03009_ch_T0000277;transcript_name=hg002_chrY_paternal_174.1;gene_name=TSPY4;ID=exon:HG03009_ch_T0000277:1;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9133337	9133464	.	+	.	source_transcript=hg002_chrY_paternal_174.4;source_transcript_name=hg002_chrY_paternal_174.1;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_174.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.4,hg002_chrY_paternal_176.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000277;gene_id=HG03009_ch_G0000100;Parent=HG03009_ch_T0000277;transcript_name=hg002_chrY_paternal_174.1;gene_name=TSPY4;ID=intron:HG03009_ch_T0000277:1;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9133465	9133576	.	+	.	source_transcript=hg002_chrY_paternal_174.4;source_transcript_name=hg002_chrY_paternal_174.1;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_174.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.4,hg002_chrY_paternal_176.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000277;gene_id=HG03009_ch_G0000100;Parent=HG03009_ch_T0000277;transcript_name=hg002_chrY_paternal_174.1;gene_name=TSPY4;ID=exon:HG03009_ch_T0000277:2;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9133577	9133684	.	+	.	source_transcript=hg002_chrY_paternal_174.4;source_transcript_name=hg002_chrY_paternal_174.1;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_174.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.4,hg002_chrY_paternal_176.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000277;gene_id=HG03009_ch_G0000100;Parent=HG03009_ch_T0000277;transcript_name=hg002_chrY_paternal_174.1;gene_name=TSPY4;ID=intron:HG03009_ch_T0000277:2;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9133685	9133823	.	+	.	source_transcript=hg002_chrY_paternal_174.4;source_transcript_name=hg002_chrY_paternal_174.1;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_174.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.4,hg002_chrY_paternal_176.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000277;gene_id=HG03009_ch_G0000100;Parent=HG03009_ch_T0000277;transcript_name=hg002_chrY_paternal_174.1;gene_name=TSPY4;ID=exon:HG03009_ch_T0000277:3;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9133824	9133918	.	+	.	source_transcript=hg002_chrY_paternal_174.4;source_transcript_name=hg002_chrY_paternal_174.1;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_174.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.4,hg002_chrY_paternal_176.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000277;gene_id=HG03009_ch_G0000100;Parent=HG03009_ch_T0000277;transcript_name=hg002_chrY_paternal_174.1;gene_name=TSPY4;ID=intron:HG03009_ch_T0000277:3;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9133919	9134011	.	+	.	source_transcript=hg002_chrY_paternal_174.4;source_transcript_name=hg002_chrY_paternal_174.1;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_174.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.4,hg002_chrY_paternal_176.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000277;gene_id=HG03009_ch_G0000100;Parent=HG03009_ch_T0000277;transcript_name=hg002_chrY_paternal_174.1;gene_name=TSPY4;ID=exon:HG03009_ch_T0000277:4;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9134012	9134705	.	+	.	source_transcript=hg002_chrY_paternal_174.4;source_transcript_name=hg002_chrY_paternal_174.1;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_174.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.4,hg002_chrY_paternal_176.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000277;gene_id=HG03009_ch_G0000100;Parent=HG03009_ch_T0000277;transcript_name=hg002_chrY_paternal_174.1;gene_name=TSPY4;ID=intron:HG03009_ch_T0000277:4;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9134706	9134916	.	+	.	source_transcript=hg002_chrY_paternal_174.4;source_transcript_name=hg002_chrY_paternal_174.1;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_174.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.4,hg002_chrY_paternal_176.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000277;gene_id=HG03009_ch_G0000100;Parent=HG03009_ch_T0000277;transcript_name=hg002_chrY_paternal_174.1;gene_name=TSPY4;ID=exon:HG03009_ch_T0000277:5;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	9144211	9149811	.	-	.	source_gene_common_name=FAM197Y8;source_gene=hg002_chrY_paternal_161;alternative_source_transcripts=hg002_chrY_paternal_177.1,hg002_chrY_paternal_177.1;gene_id=HG03009_ch_G0000101;gene_biotype=lncRNA;gene_name=FAM197Y8;gene_sources=liftoff;ID=HG03009_ch_G0000101;Name=FAM197Y8
HG03009_chrY	CAT	transcript	9144211	9149811	1000	-	.	source_transcript=hg002_chrY_paternal_161.1;source_transcript_name=hg002_chrY_paternal_161.1;source_gene=hg002_chrY_paternal_161;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_161;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_161.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_161.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;alternative_source_transcripts=hg002_chrY_paternal_177.1,hg002_chrY_paternal_177.1;transcript_id=HG03009_ch_T0000278;gene_id=HG03009_ch_G0000101;Parent=HG03009_ch_G0000101;transcript_name=hg002_chrY_paternal_161.1;gene_name=FAM197Y8;ID=HG03009_ch_T0000278;Name=FAM197Y8
HG03009_chrY	CAT	exon	9144211	9144270	.	-	.	source_transcript=hg002_chrY_paternal_161.1;source_transcript_name=hg002_chrY_paternal_161.1;source_gene=hg002_chrY_paternal_161;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_161;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_161.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_161.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;alternative_source_transcripts=hg002_chrY_paternal_177.1,hg002_chrY_paternal_177.1;transcript_id=HG03009_ch_T0000278;gene_id=HG03009_ch_G0000101;Parent=HG03009_ch_T0000278;transcript_name=hg002_chrY_paternal_161.1;gene_name=FAM197Y8;ID=exon:HG03009_ch_T0000278:0;Name=FAM197Y8;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9144271	9147824	.	-	.	source_transcript=hg002_chrY_paternal_161.1;source_transcript_name=hg002_chrY_paternal_161.1;source_gene=hg002_chrY_paternal_161;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_161;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_161.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_161.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;alternative_source_transcripts=hg002_chrY_paternal_177.1,hg002_chrY_paternal_177.1;transcript_id=HG03009_ch_T0000278;gene_id=HG03009_ch_G0000101;Parent=HG03009_ch_T0000278;transcript_name=hg002_chrY_paternal_161.1;gene_name=FAM197Y8;ID=intron:HG03009_ch_T0000278:0;Name=FAM197Y8;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9147825	9147983	.	-	.	source_transcript=hg002_chrY_paternal_161.1;source_transcript_name=hg002_chrY_paternal_161.1;source_gene=hg002_chrY_paternal_161;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_161;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_161.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_161.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;alternative_source_transcripts=hg002_chrY_paternal_177.1,hg002_chrY_paternal_177.1;transcript_id=HG03009_ch_T0000278;gene_id=HG03009_ch_G0000101;Parent=HG03009_ch_T0000278;transcript_name=hg002_chrY_paternal_161.1;gene_name=FAM197Y8;ID=exon:HG03009_ch_T0000278:1;Name=FAM197Y8;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9147984	9149477	.	-	.	source_transcript=hg002_chrY_paternal_161.1;source_transcript_name=hg002_chrY_paternal_161.1;source_gene=hg002_chrY_paternal_161;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_161;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_161.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_161.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;alternative_source_transcripts=hg002_chrY_paternal_177.1,hg002_chrY_paternal_177.1;transcript_id=HG03009_ch_T0000278;gene_id=HG03009_ch_G0000101;Parent=HG03009_ch_T0000278;transcript_name=hg002_chrY_paternal_161.1;gene_name=FAM197Y8;ID=intron:HG03009_ch_T0000278:1;Name=FAM197Y8;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9149478	9149623	.	-	.	source_transcript=hg002_chrY_paternal_161.1;source_transcript_name=hg002_chrY_paternal_161.1;source_gene=hg002_chrY_paternal_161;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_161;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_161.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_161.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;alternative_source_transcripts=hg002_chrY_paternal_177.1,hg002_chrY_paternal_177.1;transcript_id=HG03009_ch_T0000278;gene_id=HG03009_ch_G0000101;Parent=HG03009_ch_T0000278;transcript_name=hg002_chrY_paternal_161.1;gene_name=FAM197Y8;ID=exon:HG03009_ch_T0000278:2;Name=FAM197Y8;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9149624	9149709	.	-	.	source_transcript=hg002_chrY_paternal_161.1;source_transcript_name=hg002_chrY_paternal_161.1;source_gene=hg002_chrY_paternal_161;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_161;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_161.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_161.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;alternative_source_transcripts=hg002_chrY_paternal_177.1,hg002_chrY_paternal_177.1;transcript_id=HG03009_ch_T0000278;gene_id=HG03009_ch_G0000101;Parent=HG03009_ch_T0000278;transcript_name=hg002_chrY_paternal_161.1;gene_name=FAM197Y8;ID=intron:HG03009_ch_T0000278:2;Name=FAM197Y8;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9149710	9149811	.	-	.	source_transcript=hg002_chrY_paternal_161.1;source_transcript_name=hg002_chrY_paternal_161.1;source_gene=hg002_chrY_paternal_161;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_161;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_161.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_161.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;alternative_source_transcripts=hg002_chrY_paternal_177.1,hg002_chrY_paternal_177.1;transcript_id=HG03009_ch_T0000278;gene_id=HG03009_ch_G0000101;Parent=HG03009_ch_T0000278;transcript_name=hg002_chrY_paternal_161.1;gene_name=FAM197Y8;ID=exon:HG03009_ch_T0000278:3;Name=FAM197Y8;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	9152424	9155220	.	+	.	source_gene_common_name=TSPY1;source_gene=hg002_chrY_paternal_196;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_178.1;gene_id=HG03009_ch_G0000102;gene_biotype=protein_coding;gene_name=TSPY1;gene_sources=liftoff;ID=HG03009_ch_G0000102;Name=TSPY1
HG03009_chrY	CAT	transcript	9152424	9155220	100	+	.	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_178.1;transcript_id=HG03009_ch_T0000279;gene_id=HG03009_ch_G0000102;Parent=HG03009_ch_G0000102;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=HG03009_ch_T0000279;Name=TSPY1
HG03009_chrY	CAT	exon	9152424	9152955	.	+	.	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_178.1;transcript_id=HG03009_ch_T0000279;gene_id=HG03009_ch_G0000102;Parent=HG03009_ch_T0000279;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000279:0;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9152470	9152955	.	+	0	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_178.1;transcript_id=HG03009_ch_T0000279;gene_id=HG03009_ch_G0000102;Parent=HG03009_ch_T0000279;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000279:0;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	9152470	9152472	.	+	0	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_178.1;transcript_id=HG03009_ch_T0000279;gene_id=HG03009_ch_G0000102;Parent=HG03009_ch_T0000279;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=start_codon:HG03009_ch_T0000279;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9152956	9153562	.	+	.	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_178.1;transcript_id=HG03009_ch_T0000279;gene_id=HG03009_ch_G0000102;Parent=HG03009_ch_T0000279;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000279:0;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9153563	9153640	.	+	.	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_178.1;transcript_id=HG03009_ch_T0000279;gene_id=HG03009_ch_G0000102;Parent=HG03009_ch_T0000279;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000279:1;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9153563	9153640	.	+	0	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_178.1;transcript_id=HG03009_ch_T0000279;gene_id=HG03009_ch_G0000102;Parent=HG03009_ch_T0000279;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000279:1;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9153641	9153768	.	+	.	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_178.1;transcript_id=HG03009_ch_T0000279;gene_id=HG03009_ch_G0000102;Parent=HG03009_ch_T0000279;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000279:1;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9153769	9153880	.	+	.	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_178.1;transcript_id=HG03009_ch_T0000279;gene_id=HG03009_ch_G0000102;Parent=HG03009_ch_T0000279;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000279:2;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9153769	9153880	.	+	0	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_178.1;transcript_id=HG03009_ch_T0000279;gene_id=HG03009_ch_G0000102;Parent=HG03009_ch_T0000279;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000279:2;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9153881	9153981	.	+	.	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_178.1;transcript_id=HG03009_ch_T0000279;gene_id=HG03009_ch_G0000102;Parent=HG03009_ch_T0000279;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000279:2;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9153982	9154127	.	+	.	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_178.1;transcript_id=HG03009_ch_T0000279;gene_id=HG03009_ch_G0000102;Parent=HG03009_ch_T0000279;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000279:3;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9153982	9154127	.	+	2	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_178.1;transcript_id=HG03009_ch_T0000279;gene_id=HG03009_ch_G0000102;Parent=HG03009_ch_T0000279;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000279:3;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9154128	9154233	.	+	.	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_178.1;transcript_id=HG03009_ch_T0000279;gene_id=HG03009_ch_G0000102;Parent=HG03009_ch_T0000279;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000279:3;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9154234	9154315	.	+	.	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_178.1;transcript_id=HG03009_ch_T0000279;gene_id=HG03009_ch_G0000102;Parent=HG03009_ch_T0000279;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000279:4;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9154234	9154315	.	+	0	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_178.1;transcript_id=HG03009_ch_T0000279;gene_id=HG03009_ch_G0000102;Parent=HG03009_ch_T0000279;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000279:4;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9154316	9155009	.	+	.	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_178.1;transcript_id=HG03009_ch_T0000279;gene_id=HG03009_ch_G0000102;Parent=HG03009_ch_T0000279;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000279:4;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9155010	9155220	.	+	.	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_178.1;transcript_id=HG03009_ch_T0000279;gene_id=HG03009_ch_G0000102;Parent=HG03009_ch_T0000279;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000279:5;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9155010	9155032	.	+	2	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_178.1;transcript_id=HG03009_ch_T0000279;gene_id=HG03009_ch_G0000102;Parent=HG03009_ch_T0000279;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000279:5;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	9155030	9155032	.	+	0	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_178.1;transcript_id=HG03009_ch_T0000279;gene_id=HG03009_ch_G0000102;Parent=HG03009_ch_T0000279;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=stop_codon:HG03009_ch_T0000279;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	9152424	9155220	100	+	.	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_178.2;transcript_id=HG03009_ch_T0000280;gene_id=HG03009_ch_G0000102;Parent=HG03009_ch_G0000102;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=HG03009_ch_T0000280;Name=TSPY1
HG03009_chrY	CAT	exon	9152424	9152955	.	+	.	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_178.2;transcript_id=HG03009_ch_T0000280;gene_id=HG03009_ch_G0000102;Parent=HG03009_ch_T0000280;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000280:0;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9152470	9152955	.	+	0	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_178.2;transcript_id=HG03009_ch_T0000280;gene_id=HG03009_ch_G0000102;Parent=HG03009_ch_T0000280;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000280:0;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	9152470	9152472	.	+	0	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_178.2;transcript_id=HG03009_ch_T0000280;gene_id=HG03009_ch_G0000102;Parent=HG03009_ch_T0000280;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=start_codon:HG03009_ch_T0000280;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9152956	9153562	.	+	.	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_178.2;transcript_id=HG03009_ch_T0000280;gene_id=HG03009_ch_G0000102;Parent=HG03009_ch_T0000280;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000280:0;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9153563	9153640	.	+	.	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_178.2;transcript_id=HG03009_ch_T0000280;gene_id=HG03009_ch_G0000102;Parent=HG03009_ch_T0000280;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000280:1;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9153563	9153640	.	+	0	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_178.2;transcript_id=HG03009_ch_T0000280;gene_id=HG03009_ch_G0000102;Parent=HG03009_ch_T0000280;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000280:1;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9153641	9153768	.	+	.	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_178.2;transcript_id=HG03009_ch_T0000280;gene_id=HG03009_ch_G0000102;Parent=HG03009_ch_T0000280;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000280:1;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9153769	9153880	.	+	.	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_178.2;transcript_id=HG03009_ch_T0000280;gene_id=HG03009_ch_G0000102;Parent=HG03009_ch_T0000280;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000280:2;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9153769	9153880	.	+	0	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_178.2;transcript_id=HG03009_ch_T0000280;gene_id=HG03009_ch_G0000102;Parent=HG03009_ch_T0000280;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000280:2;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9153881	9153981	.	+	.	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_178.2;transcript_id=HG03009_ch_T0000280;gene_id=HG03009_ch_G0000102;Parent=HG03009_ch_T0000280;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000280:2;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9153982	9154127	.	+	.	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_178.2;transcript_id=HG03009_ch_T0000280;gene_id=HG03009_ch_G0000102;Parent=HG03009_ch_T0000280;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000280:3;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9153982	9154127	.	+	2	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_178.2;transcript_id=HG03009_ch_T0000280;gene_id=HG03009_ch_G0000102;Parent=HG03009_ch_T0000280;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000280:3;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9154128	9154222	.	+	.	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_178.2;transcript_id=HG03009_ch_T0000280;gene_id=HG03009_ch_G0000102;Parent=HG03009_ch_T0000280;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000280:3;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9154223	9154315	.	+	.	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_178.2;transcript_id=HG03009_ch_T0000280;gene_id=HG03009_ch_G0000102;Parent=HG03009_ch_T0000280;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000280:4;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9154223	9154285	.	+	0	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_178.2;transcript_id=HG03009_ch_T0000280;gene_id=HG03009_ch_G0000102;Parent=HG03009_ch_T0000280;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000280:4;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	9154283	9154285	.	+	0	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_178.2;transcript_id=HG03009_ch_T0000280;gene_id=HG03009_ch_G0000102;Parent=HG03009_ch_T0000280;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=stop_codon:HG03009_ch_T0000280;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9154316	9155009	.	+	.	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_178.2;transcript_id=HG03009_ch_T0000280;gene_id=HG03009_ch_G0000102;Parent=HG03009_ch_T0000280;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000280:4;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9155010	9155220	.	+	.	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_178.2;transcript_id=HG03009_ch_T0000280;gene_id=HG03009_ch_G0000102;Parent=HG03009_ch_T0000280;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000280:5;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	9152424	9155220	100	+	.	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_178.3;transcript_id=HG03009_ch_T0000281;gene_id=HG03009_ch_G0000102;Parent=HG03009_ch_G0000102;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=HG03009_ch_T0000281;Name=TSPY1
HG03009_chrY	CAT	exon	9152424	9152955	.	+	.	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_178.3;transcript_id=HG03009_ch_T0000281;gene_id=HG03009_ch_G0000102;Parent=HG03009_ch_T0000281;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000281:0;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9152470	9152955	.	+	0	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_178.3;transcript_id=HG03009_ch_T0000281;gene_id=HG03009_ch_G0000102;Parent=HG03009_ch_T0000281;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000281:0;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	9152470	9152472	.	+	0	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_178.3;transcript_id=HG03009_ch_T0000281;gene_id=HG03009_ch_G0000102;Parent=HG03009_ch_T0000281;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=start_codon:HG03009_ch_T0000281;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9152956	9153562	.	+	.	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_178.3;transcript_id=HG03009_ch_T0000281;gene_id=HG03009_ch_G0000102;Parent=HG03009_ch_T0000281;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000281:0;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9153563	9153640	.	+	.	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_178.3;transcript_id=HG03009_ch_T0000281;gene_id=HG03009_ch_G0000102;Parent=HG03009_ch_T0000281;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000281:1;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9153563	9153640	.	+	0	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_178.3;transcript_id=HG03009_ch_T0000281;gene_id=HG03009_ch_G0000102;Parent=HG03009_ch_T0000281;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000281:1;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9153641	9153768	.	+	.	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_178.3;transcript_id=HG03009_ch_T0000281;gene_id=HG03009_ch_G0000102;Parent=HG03009_ch_T0000281;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000281:1;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9153769	9153880	.	+	.	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_178.3;transcript_id=HG03009_ch_T0000281;gene_id=HG03009_ch_G0000102;Parent=HG03009_ch_T0000281;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000281:2;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9153769	9153880	.	+	0	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_178.3;transcript_id=HG03009_ch_T0000281;gene_id=HG03009_ch_G0000102;Parent=HG03009_ch_T0000281;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000281:2;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9153881	9153988	.	+	.	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_178.3;transcript_id=HG03009_ch_T0000281;gene_id=HG03009_ch_G0000102;Parent=HG03009_ch_T0000281;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000281:2;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9153989	9154127	.	+	.	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_178.3;transcript_id=HG03009_ch_T0000281;gene_id=HG03009_ch_G0000102;Parent=HG03009_ch_T0000281;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000281:3;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9153989	9154127	.	+	2	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_178.3;transcript_id=HG03009_ch_T0000281;gene_id=HG03009_ch_G0000102;Parent=HG03009_ch_T0000281;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000281:3;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9154128	9154233	.	+	.	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_178.3;transcript_id=HG03009_ch_T0000281;gene_id=HG03009_ch_G0000102;Parent=HG03009_ch_T0000281;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000281:3;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9154234	9154315	.	+	.	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_178.3;transcript_id=HG03009_ch_T0000281;gene_id=HG03009_ch_G0000102;Parent=HG03009_ch_T0000281;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000281:4;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9154234	9154285	.	+	1	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_178.3;transcript_id=HG03009_ch_T0000281;gene_id=HG03009_ch_G0000102;Parent=HG03009_ch_T0000281;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000281:4;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	9154283	9154285	.	+	0	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_178.3;transcript_id=HG03009_ch_T0000281;gene_id=HG03009_ch_G0000102;Parent=HG03009_ch_T0000281;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=stop_codon:HG03009_ch_T0000281;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9154316	9155009	.	+	.	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_178.3;transcript_id=HG03009_ch_T0000281;gene_id=HG03009_ch_G0000102;Parent=HG03009_ch_T0000281;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000281:4;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9155010	9155220	.	+	.	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_178.3;transcript_id=HG03009_ch_T0000281;gene_id=HG03009_ch_G0000102;Parent=HG03009_ch_T0000281;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000281:5;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	9152424	9155220	100	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03009_ch_T0000282;gene_id=HG03009_ch_G0000102;Parent=HG03009_ch_G0000102;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=HG03009_ch_T0000282;Name=TSPY1
HG03009_chrY	CAT	exon	9152424	9152556	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03009_ch_T0000282;gene_id=HG03009_ch_G0000102;Parent=HG03009_ch_T0000282;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000282:0;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9152470	9152556	.	+	0	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03009_ch_T0000282;gene_id=HG03009_ch_G0000102;Parent=HG03009_ch_T0000282;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000282:0;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	9152470	9152472	.	+	0	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03009_ch_T0000282;gene_id=HG03009_ch_G0000102;Parent=HG03009_ch_T0000282;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=start_codon:HG03009_ch_T0000282;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9152557	9152817	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03009_ch_T0000282;gene_id=HG03009_ch_G0000102;Parent=HG03009_ch_T0000282;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000282:0;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9152818	9152955	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03009_ch_T0000282;gene_id=HG03009_ch_G0000102;Parent=HG03009_ch_T0000282;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000282:1;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9152818	9152955	.	+	0	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03009_ch_T0000282;gene_id=HG03009_ch_G0000102;Parent=HG03009_ch_T0000282;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000282:1;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9152956	9153562	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03009_ch_T0000282;gene_id=HG03009_ch_G0000102;Parent=HG03009_ch_T0000282;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000282:1;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9153563	9153640	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03009_ch_T0000282;gene_id=HG03009_ch_G0000102;Parent=HG03009_ch_T0000282;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000282:2;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9153563	9153640	.	+	0	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03009_ch_T0000282;gene_id=HG03009_ch_G0000102;Parent=HG03009_ch_T0000282;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000282:2;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9153641	9153768	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03009_ch_T0000282;gene_id=HG03009_ch_G0000102;Parent=HG03009_ch_T0000282;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000282:2;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9153769	9153880	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03009_ch_T0000282;gene_id=HG03009_ch_G0000102;Parent=HG03009_ch_T0000282;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000282:3;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9153769	9153880	.	+	0	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03009_ch_T0000282;gene_id=HG03009_ch_G0000102;Parent=HG03009_ch_T0000282;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000282:3;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9153881	9153981	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03009_ch_T0000282;gene_id=HG03009_ch_G0000102;Parent=HG03009_ch_T0000282;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000282:3;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9153982	9154127	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03009_ch_T0000282;gene_id=HG03009_ch_G0000102;Parent=HG03009_ch_T0000282;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000282:4;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9153982	9154127	.	+	2	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03009_ch_T0000282;gene_id=HG03009_ch_G0000102;Parent=HG03009_ch_T0000282;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000282:4;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9154128	9154233	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03009_ch_T0000282;gene_id=HG03009_ch_G0000102;Parent=HG03009_ch_T0000282;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000282:4;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9154234	9154315	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03009_ch_T0000282;gene_id=HG03009_ch_G0000102;Parent=HG03009_ch_T0000282;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000282:5;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9154234	9154315	.	+	0	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03009_ch_T0000282;gene_id=HG03009_ch_G0000102;Parent=HG03009_ch_T0000282;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000282:5;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9154316	9155009	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03009_ch_T0000282;gene_id=HG03009_ch_G0000102;Parent=HG03009_ch_T0000282;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000282:5;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9155010	9155220	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03009_ch_T0000282;gene_id=HG03009_ch_G0000102;Parent=HG03009_ch_T0000282;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000282:6;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9155010	9155032	.	+	2	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03009_ch_T0000282;gene_id=HG03009_ch_G0000102;Parent=HG03009_ch_T0000282;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000282:6;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	9155030	9155032	.	+	0	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03009_ch_T0000282;gene_id=HG03009_ch_G0000102;Parent=HG03009_ch_T0000282;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=stop_codon:HG03009_ch_T0000282;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	9152424	9155220	1000	+	.	source_transcript=hg002_chrY_paternal_196.5;source_transcript_name=hg002_chrY_paternal_196.1;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_196.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.4,hg002_chrY_paternal_178.4;transcript_id=HG03009_ch_T0000283;gene_id=HG03009_ch_G0000102;Parent=HG03009_ch_G0000102;transcript_name=hg002_chrY_paternal_196.1;gene_name=TSPY1;ID=HG03009_ch_T0000283;Name=TSPY1
HG03009_chrY	CAT	exon	9152424	9152955	.	+	.	source_transcript=hg002_chrY_paternal_196.5;source_transcript_name=hg002_chrY_paternal_196.1;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_196.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.4,hg002_chrY_paternal_178.4;transcript_id=HG03009_ch_T0000283;gene_id=HG03009_ch_G0000102;Parent=HG03009_ch_T0000283;transcript_name=hg002_chrY_paternal_196.1;gene_name=TSPY1;ID=exon:HG03009_ch_T0000283:0;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9152956	9153562	.	+	.	source_transcript=hg002_chrY_paternal_196.5;source_transcript_name=hg002_chrY_paternal_196.1;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_196.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.4,hg002_chrY_paternal_178.4;transcript_id=HG03009_ch_T0000283;gene_id=HG03009_ch_G0000102;Parent=HG03009_ch_T0000283;transcript_name=hg002_chrY_paternal_196.1;gene_name=TSPY1;ID=intron:HG03009_ch_T0000283:0;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9153563	9153640	.	+	.	source_transcript=hg002_chrY_paternal_196.5;source_transcript_name=hg002_chrY_paternal_196.1;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_196.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.4,hg002_chrY_paternal_178.4;transcript_id=HG03009_ch_T0000283;gene_id=HG03009_ch_G0000102;Parent=HG03009_ch_T0000283;transcript_name=hg002_chrY_paternal_196.1;gene_name=TSPY1;ID=exon:HG03009_ch_T0000283:1;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9153641	9153768	.	+	.	source_transcript=hg002_chrY_paternal_196.5;source_transcript_name=hg002_chrY_paternal_196.1;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_196.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.4,hg002_chrY_paternal_178.4;transcript_id=HG03009_ch_T0000283;gene_id=HG03009_ch_G0000102;Parent=HG03009_ch_T0000283;transcript_name=hg002_chrY_paternal_196.1;gene_name=TSPY1;ID=intron:HG03009_ch_T0000283:1;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9153769	9153880	.	+	.	source_transcript=hg002_chrY_paternal_196.5;source_transcript_name=hg002_chrY_paternal_196.1;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_196.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.4,hg002_chrY_paternal_178.4;transcript_id=HG03009_ch_T0000283;gene_id=HG03009_ch_G0000102;Parent=HG03009_ch_T0000283;transcript_name=hg002_chrY_paternal_196.1;gene_name=TSPY1;ID=exon:HG03009_ch_T0000283:2;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9153881	9153988	.	+	.	source_transcript=hg002_chrY_paternal_196.5;source_transcript_name=hg002_chrY_paternal_196.1;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_196.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.4,hg002_chrY_paternal_178.4;transcript_id=HG03009_ch_T0000283;gene_id=HG03009_ch_G0000102;Parent=HG03009_ch_T0000283;transcript_name=hg002_chrY_paternal_196.1;gene_name=TSPY1;ID=intron:HG03009_ch_T0000283:2;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9153989	9154127	.	+	.	source_transcript=hg002_chrY_paternal_196.5;source_transcript_name=hg002_chrY_paternal_196.1;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_196.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.4,hg002_chrY_paternal_178.4;transcript_id=HG03009_ch_T0000283;gene_id=HG03009_ch_G0000102;Parent=HG03009_ch_T0000283;transcript_name=hg002_chrY_paternal_196.1;gene_name=TSPY1;ID=exon:HG03009_ch_T0000283:3;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9154128	9154222	.	+	.	source_transcript=hg002_chrY_paternal_196.5;source_transcript_name=hg002_chrY_paternal_196.1;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_196.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.4,hg002_chrY_paternal_178.4;transcript_id=HG03009_ch_T0000283;gene_id=HG03009_ch_G0000102;Parent=HG03009_ch_T0000283;transcript_name=hg002_chrY_paternal_196.1;gene_name=TSPY1;ID=intron:HG03009_ch_T0000283:3;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9154223	9154315	.	+	.	source_transcript=hg002_chrY_paternal_196.5;source_transcript_name=hg002_chrY_paternal_196.1;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_196.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.4,hg002_chrY_paternal_178.4;transcript_id=HG03009_ch_T0000283;gene_id=HG03009_ch_G0000102;Parent=HG03009_ch_T0000283;transcript_name=hg002_chrY_paternal_196.1;gene_name=TSPY1;ID=exon:HG03009_ch_T0000283:4;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9154316	9155009	.	+	.	source_transcript=hg002_chrY_paternal_196.5;source_transcript_name=hg002_chrY_paternal_196.1;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_196.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.4,hg002_chrY_paternal_178.4;transcript_id=HG03009_ch_T0000283;gene_id=HG03009_ch_G0000102;Parent=HG03009_ch_T0000283;transcript_name=hg002_chrY_paternal_196.1;gene_name=TSPY1;ID=intron:HG03009_ch_T0000283:4;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9155010	9155220	.	+	.	source_transcript=hg002_chrY_paternal_196.5;source_transcript_name=hg002_chrY_paternal_196.1;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_196.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.4,hg002_chrY_paternal_178.4;transcript_id=HG03009_ch_T0000283;gene_id=HG03009_ch_G0000102;Parent=HG03009_ch_T0000283;transcript_name=hg002_chrY_paternal_196.1;gene_name=TSPY1;ID=exon:HG03009_ch_T0000283:5;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	9164490	9170095	.	-	.	source_gene_common_name=FAM197Y3;source_gene=hg002_chrY_paternal_197;alternative_source_transcripts=hg002_chrY_paternal_179.1,hg002_chrY_paternal_179.1;gene_id=HG03009_ch_G0000103;gene_biotype=lncRNA;gene_name=FAM197Y3;gene_sources=liftoff;ID=HG03009_ch_G0000103;Name=FAM197Y3
HG03009_chrY	CAT	transcript	9164490	9170095	1000	-	.	source_transcript=hg002_chrY_paternal_197.1;source_transcript_name=hg002_chrY_paternal_197.1;source_gene=hg002_chrY_paternal_197;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_197;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_197.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_197.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_179.1,hg002_chrY_paternal_179.1;transcript_id=HG03009_ch_T0000284;gene_id=HG03009_ch_G0000103;Parent=HG03009_ch_G0000103;transcript_name=hg002_chrY_paternal_197.1;gene_name=FAM197Y3;ID=HG03009_ch_T0000284;Name=FAM197Y3
HG03009_chrY	CAT	exon	9164490	9164549	.	-	.	source_transcript=hg002_chrY_paternal_197.1;source_transcript_name=hg002_chrY_paternal_197.1;source_gene=hg002_chrY_paternal_197;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_197;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_197.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_197.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_179.1,hg002_chrY_paternal_179.1;transcript_id=HG03009_ch_T0000284;gene_id=HG03009_ch_G0000103;Parent=HG03009_ch_T0000284;transcript_name=hg002_chrY_paternal_197.1;gene_name=FAM197Y3;ID=exon:HG03009_ch_T0000284:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9164550	9168100	.	-	.	source_transcript=hg002_chrY_paternal_197.1;source_transcript_name=hg002_chrY_paternal_197.1;source_gene=hg002_chrY_paternal_197;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_197;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_197.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_197.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_179.1,hg002_chrY_paternal_179.1;transcript_id=HG03009_ch_T0000284;gene_id=HG03009_ch_G0000103;Parent=HG03009_ch_T0000284;transcript_name=hg002_chrY_paternal_197.1;gene_name=FAM197Y3;ID=intron:HG03009_ch_T0000284:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9168101	9168259	.	-	.	source_transcript=hg002_chrY_paternal_197.1;source_transcript_name=hg002_chrY_paternal_197.1;source_gene=hg002_chrY_paternal_197;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_197;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_197.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_197.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_179.1,hg002_chrY_paternal_179.1;transcript_id=HG03009_ch_T0000284;gene_id=HG03009_ch_G0000103;Parent=HG03009_ch_T0000284;transcript_name=hg002_chrY_paternal_197.1;gene_name=FAM197Y3;ID=exon:HG03009_ch_T0000284:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9168260	9169761	.	-	.	source_transcript=hg002_chrY_paternal_197.1;source_transcript_name=hg002_chrY_paternal_197.1;source_gene=hg002_chrY_paternal_197;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_197;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_197.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_197.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_179.1,hg002_chrY_paternal_179.1;transcript_id=HG03009_ch_T0000284;gene_id=HG03009_ch_G0000103;Parent=HG03009_ch_T0000284;transcript_name=hg002_chrY_paternal_197.1;gene_name=FAM197Y3;ID=intron:HG03009_ch_T0000284:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9169762	9169907	.	-	.	source_transcript=hg002_chrY_paternal_197.1;source_transcript_name=hg002_chrY_paternal_197.1;source_gene=hg002_chrY_paternal_197;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_197;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_197.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_197.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_179.1,hg002_chrY_paternal_179.1;transcript_id=HG03009_ch_T0000284;gene_id=HG03009_ch_G0000103;Parent=HG03009_ch_T0000284;transcript_name=hg002_chrY_paternal_197.1;gene_name=FAM197Y3;ID=exon:HG03009_ch_T0000284:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9169908	9169993	.	-	.	source_transcript=hg002_chrY_paternal_197.1;source_transcript_name=hg002_chrY_paternal_197.1;source_gene=hg002_chrY_paternal_197;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_197;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_197.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_197.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_179.1,hg002_chrY_paternal_179.1;transcript_id=HG03009_ch_T0000284;gene_id=HG03009_ch_G0000103;Parent=HG03009_ch_T0000284;transcript_name=hg002_chrY_paternal_197.1;gene_name=FAM197Y3;ID=intron:HG03009_ch_T0000284:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9169994	9170095	.	-	.	source_transcript=hg002_chrY_paternal_197.1;source_transcript_name=hg002_chrY_paternal_197.1;source_gene=hg002_chrY_paternal_197;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_197;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_197.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_197.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_179.1,hg002_chrY_paternal_179.1;transcript_id=HG03009_ch_T0000284;gene_id=HG03009_ch_G0000103;Parent=HG03009_ch_T0000284;transcript_name=hg002_chrY_paternal_197.1;gene_name=FAM197Y3;ID=exon:HG03009_ch_T0000284:3;Name=FAM197Y3;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	9172708	9175504	.	+	.	source_gene_common_name=TSPY1;source_gene=hg002_chrY_paternal_198;alternative_source_transcripts=hg002_chrY_paternal_180.1,hg002_chrY_paternal_180.1;gene_id=HG03009_ch_G0000104;gene_biotype=protein_coding;gene_name=TSPY1;gene_sources=liftoff;ID=HG03009_ch_G0000104;Name=TSPY1
HG03009_chrY	CAT	transcript	9172708	9175504	100	+	.	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.1,hg002_chrY_paternal_180.1;transcript_id=HG03009_ch_T0000285;gene_id=HG03009_ch_G0000104;Parent=HG03009_ch_G0000104;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=HG03009_ch_T0000285;Name=TSPY1
HG03009_chrY	CAT	exon	9172708	9173239	.	+	.	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.1,hg002_chrY_paternal_180.1;transcript_id=HG03009_ch_T0000285;gene_id=HG03009_ch_G0000104;Parent=HG03009_ch_T0000285;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000285:0;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9172754	9173239	.	+	0	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.1,hg002_chrY_paternal_180.1;transcript_id=HG03009_ch_T0000285;gene_id=HG03009_ch_G0000104;Parent=HG03009_ch_T0000285;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000285:0;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	9172754	9172756	.	+	0	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.1,hg002_chrY_paternal_180.1;transcript_id=HG03009_ch_T0000285;gene_id=HG03009_ch_G0000104;Parent=HG03009_ch_T0000285;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=start_codon:HG03009_ch_T0000285;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9173240	9173846	.	+	.	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.1,hg002_chrY_paternal_180.1;transcript_id=HG03009_ch_T0000285;gene_id=HG03009_ch_G0000104;Parent=HG03009_ch_T0000285;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000285:0;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9173847	9173924	.	+	.	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.1,hg002_chrY_paternal_180.1;transcript_id=HG03009_ch_T0000285;gene_id=HG03009_ch_G0000104;Parent=HG03009_ch_T0000285;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000285:1;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9173847	9173924	.	+	0	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.1,hg002_chrY_paternal_180.1;transcript_id=HG03009_ch_T0000285;gene_id=HG03009_ch_G0000104;Parent=HG03009_ch_T0000285;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000285:1;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9173925	9174052	.	+	.	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.1,hg002_chrY_paternal_180.1;transcript_id=HG03009_ch_T0000285;gene_id=HG03009_ch_G0000104;Parent=HG03009_ch_T0000285;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000285:1;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9174053	9174164	.	+	.	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.1,hg002_chrY_paternal_180.1;transcript_id=HG03009_ch_T0000285;gene_id=HG03009_ch_G0000104;Parent=HG03009_ch_T0000285;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000285:2;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9174053	9174164	.	+	0	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.1,hg002_chrY_paternal_180.1;transcript_id=HG03009_ch_T0000285;gene_id=HG03009_ch_G0000104;Parent=HG03009_ch_T0000285;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000285:2;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9174165	9174265	.	+	.	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.1,hg002_chrY_paternal_180.1;transcript_id=HG03009_ch_T0000285;gene_id=HG03009_ch_G0000104;Parent=HG03009_ch_T0000285;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000285:2;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9174266	9174411	.	+	.	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.1,hg002_chrY_paternal_180.1;transcript_id=HG03009_ch_T0000285;gene_id=HG03009_ch_G0000104;Parent=HG03009_ch_T0000285;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000285:3;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9174266	9174411	.	+	2	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.1,hg002_chrY_paternal_180.1;transcript_id=HG03009_ch_T0000285;gene_id=HG03009_ch_G0000104;Parent=HG03009_ch_T0000285;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000285:3;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9174412	9174517	.	+	.	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.1,hg002_chrY_paternal_180.1;transcript_id=HG03009_ch_T0000285;gene_id=HG03009_ch_G0000104;Parent=HG03009_ch_T0000285;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000285:3;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9174518	9174599	.	+	.	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.1,hg002_chrY_paternal_180.1;transcript_id=HG03009_ch_T0000285;gene_id=HG03009_ch_G0000104;Parent=HG03009_ch_T0000285;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000285:4;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9174518	9174599	.	+	0	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.1,hg002_chrY_paternal_180.1;transcript_id=HG03009_ch_T0000285;gene_id=HG03009_ch_G0000104;Parent=HG03009_ch_T0000285;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000285:4;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9174600	9175293	.	+	.	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.1,hg002_chrY_paternal_180.1;transcript_id=HG03009_ch_T0000285;gene_id=HG03009_ch_G0000104;Parent=HG03009_ch_T0000285;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000285:4;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9175294	9175504	.	+	.	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.1,hg002_chrY_paternal_180.1;transcript_id=HG03009_ch_T0000285;gene_id=HG03009_ch_G0000104;Parent=HG03009_ch_T0000285;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000285:5;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9175294	9175316	.	+	2	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.1,hg002_chrY_paternal_180.1;transcript_id=HG03009_ch_T0000285;gene_id=HG03009_ch_G0000104;Parent=HG03009_ch_T0000285;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000285:5;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	9175314	9175316	.	+	0	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.1,hg002_chrY_paternal_180.1;transcript_id=HG03009_ch_T0000285;gene_id=HG03009_ch_G0000104;Parent=HG03009_ch_T0000285;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=stop_codon:HG03009_ch_T0000285;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	9172708	9175504	100	+	.	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.2,hg002_chrY_paternal_180.2;transcript_id=HG03009_ch_T0000286;gene_id=HG03009_ch_G0000104;Parent=HG03009_ch_G0000104;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=HG03009_ch_T0000286;Name=TSPY1
HG03009_chrY	CAT	exon	9172708	9173239	.	+	.	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.2,hg002_chrY_paternal_180.2;transcript_id=HG03009_ch_T0000286;gene_id=HG03009_ch_G0000104;Parent=HG03009_ch_T0000286;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000286:0;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9172754	9173239	.	+	0	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.2,hg002_chrY_paternal_180.2;transcript_id=HG03009_ch_T0000286;gene_id=HG03009_ch_G0000104;Parent=HG03009_ch_T0000286;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000286:0;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	9172754	9172756	.	+	0	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.2,hg002_chrY_paternal_180.2;transcript_id=HG03009_ch_T0000286;gene_id=HG03009_ch_G0000104;Parent=HG03009_ch_T0000286;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=start_codon:HG03009_ch_T0000286;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9173240	9173846	.	+	.	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.2,hg002_chrY_paternal_180.2;transcript_id=HG03009_ch_T0000286;gene_id=HG03009_ch_G0000104;Parent=HG03009_ch_T0000286;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000286:0;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9173847	9173924	.	+	.	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.2,hg002_chrY_paternal_180.2;transcript_id=HG03009_ch_T0000286;gene_id=HG03009_ch_G0000104;Parent=HG03009_ch_T0000286;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000286:1;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9173847	9173924	.	+	0	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.2,hg002_chrY_paternal_180.2;transcript_id=HG03009_ch_T0000286;gene_id=HG03009_ch_G0000104;Parent=HG03009_ch_T0000286;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000286:1;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9173925	9174052	.	+	.	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.2,hg002_chrY_paternal_180.2;transcript_id=HG03009_ch_T0000286;gene_id=HG03009_ch_G0000104;Parent=HG03009_ch_T0000286;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000286:1;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9174053	9174164	.	+	.	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.2,hg002_chrY_paternal_180.2;transcript_id=HG03009_ch_T0000286;gene_id=HG03009_ch_G0000104;Parent=HG03009_ch_T0000286;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000286:2;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9174053	9174164	.	+	0	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.2,hg002_chrY_paternal_180.2;transcript_id=HG03009_ch_T0000286;gene_id=HG03009_ch_G0000104;Parent=HG03009_ch_T0000286;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000286:2;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9174165	9174265	.	+	.	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.2,hg002_chrY_paternal_180.2;transcript_id=HG03009_ch_T0000286;gene_id=HG03009_ch_G0000104;Parent=HG03009_ch_T0000286;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000286:2;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9174266	9174411	.	+	.	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.2,hg002_chrY_paternal_180.2;transcript_id=HG03009_ch_T0000286;gene_id=HG03009_ch_G0000104;Parent=HG03009_ch_T0000286;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000286:3;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9174266	9174411	.	+	2	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.2,hg002_chrY_paternal_180.2;transcript_id=HG03009_ch_T0000286;gene_id=HG03009_ch_G0000104;Parent=HG03009_ch_T0000286;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000286:3;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9174412	9174506	.	+	.	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.2,hg002_chrY_paternal_180.2;transcript_id=HG03009_ch_T0000286;gene_id=HG03009_ch_G0000104;Parent=HG03009_ch_T0000286;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000286:3;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9174507	9174599	.	+	.	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.2,hg002_chrY_paternal_180.2;transcript_id=HG03009_ch_T0000286;gene_id=HG03009_ch_G0000104;Parent=HG03009_ch_T0000286;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000286:4;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9174507	9174569	.	+	0	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.2,hg002_chrY_paternal_180.2;transcript_id=HG03009_ch_T0000286;gene_id=HG03009_ch_G0000104;Parent=HG03009_ch_T0000286;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000286:4;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	9174567	9174569	.	+	0	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.2,hg002_chrY_paternal_180.2;transcript_id=HG03009_ch_T0000286;gene_id=HG03009_ch_G0000104;Parent=HG03009_ch_T0000286;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=stop_codon:HG03009_ch_T0000286;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9174600	9175293	.	+	.	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.2,hg002_chrY_paternal_180.2;transcript_id=HG03009_ch_T0000286;gene_id=HG03009_ch_G0000104;Parent=HG03009_ch_T0000286;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000286:4;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9175294	9175504	.	+	.	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.2,hg002_chrY_paternal_180.2;transcript_id=HG03009_ch_T0000286;gene_id=HG03009_ch_G0000104;Parent=HG03009_ch_T0000286;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000286:5;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	9172708	9175504	100	+	.	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.3,hg002_chrY_paternal_180.3;transcript_id=HG03009_ch_T0000287;gene_id=HG03009_ch_G0000104;Parent=HG03009_ch_G0000104;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=HG03009_ch_T0000287;Name=TSPY1
HG03009_chrY	CAT	exon	9172708	9173239	.	+	.	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.3,hg002_chrY_paternal_180.3;transcript_id=HG03009_ch_T0000287;gene_id=HG03009_ch_G0000104;Parent=HG03009_ch_T0000287;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000287:0;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9172754	9173239	.	+	0	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.3,hg002_chrY_paternal_180.3;transcript_id=HG03009_ch_T0000287;gene_id=HG03009_ch_G0000104;Parent=HG03009_ch_T0000287;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000287:0;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	9172754	9172756	.	+	0	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.3,hg002_chrY_paternal_180.3;transcript_id=HG03009_ch_T0000287;gene_id=HG03009_ch_G0000104;Parent=HG03009_ch_T0000287;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=start_codon:HG03009_ch_T0000287;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9173240	9173846	.	+	.	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.3,hg002_chrY_paternal_180.3;transcript_id=HG03009_ch_T0000287;gene_id=HG03009_ch_G0000104;Parent=HG03009_ch_T0000287;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000287:0;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9173847	9173924	.	+	.	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.3,hg002_chrY_paternal_180.3;transcript_id=HG03009_ch_T0000287;gene_id=HG03009_ch_G0000104;Parent=HG03009_ch_T0000287;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000287:1;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9173847	9173924	.	+	0	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.3,hg002_chrY_paternal_180.3;transcript_id=HG03009_ch_T0000287;gene_id=HG03009_ch_G0000104;Parent=HG03009_ch_T0000287;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000287:1;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9173925	9174052	.	+	.	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.3,hg002_chrY_paternal_180.3;transcript_id=HG03009_ch_T0000287;gene_id=HG03009_ch_G0000104;Parent=HG03009_ch_T0000287;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000287:1;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9174053	9174164	.	+	.	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.3,hg002_chrY_paternal_180.3;transcript_id=HG03009_ch_T0000287;gene_id=HG03009_ch_G0000104;Parent=HG03009_ch_T0000287;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000287:2;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9174053	9174164	.	+	0	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.3,hg002_chrY_paternal_180.3;transcript_id=HG03009_ch_T0000287;gene_id=HG03009_ch_G0000104;Parent=HG03009_ch_T0000287;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000287:2;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9174165	9174272	.	+	.	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.3,hg002_chrY_paternal_180.3;transcript_id=HG03009_ch_T0000287;gene_id=HG03009_ch_G0000104;Parent=HG03009_ch_T0000287;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000287:2;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9174273	9174411	.	+	.	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.3,hg002_chrY_paternal_180.3;transcript_id=HG03009_ch_T0000287;gene_id=HG03009_ch_G0000104;Parent=HG03009_ch_T0000287;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000287:3;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9174273	9174411	.	+	2	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.3,hg002_chrY_paternal_180.3;transcript_id=HG03009_ch_T0000287;gene_id=HG03009_ch_G0000104;Parent=HG03009_ch_T0000287;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000287:3;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9174412	9174517	.	+	.	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.3,hg002_chrY_paternal_180.3;transcript_id=HG03009_ch_T0000287;gene_id=HG03009_ch_G0000104;Parent=HG03009_ch_T0000287;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000287:3;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9174518	9174599	.	+	.	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.3,hg002_chrY_paternal_180.3;transcript_id=HG03009_ch_T0000287;gene_id=HG03009_ch_G0000104;Parent=HG03009_ch_T0000287;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000287:4;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9174518	9174569	.	+	1	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.3,hg002_chrY_paternal_180.3;transcript_id=HG03009_ch_T0000287;gene_id=HG03009_ch_G0000104;Parent=HG03009_ch_T0000287;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000287:4;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	9174567	9174569	.	+	0	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.3,hg002_chrY_paternal_180.3;transcript_id=HG03009_ch_T0000287;gene_id=HG03009_ch_G0000104;Parent=HG03009_ch_T0000287;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=stop_codon:HG03009_ch_T0000287;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9174600	9175293	.	+	.	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.3,hg002_chrY_paternal_180.3;transcript_id=HG03009_ch_T0000287;gene_id=HG03009_ch_G0000104;Parent=HG03009_ch_T0000287;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000287:4;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9175294	9175504	.	+	.	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.3,hg002_chrY_paternal_180.3;transcript_id=HG03009_ch_T0000287;gene_id=HG03009_ch_G0000104;Parent=HG03009_ch_T0000287;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000287:5;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	9172708	9175504	100	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03009_ch_T0000288;gene_id=HG03009_ch_G0000104;Parent=HG03009_ch_G0000104;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=HG03009_ch_T0000288;Name=TSPY1
HG03009_chrY	CAT	exon	9172708	9172840	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03009_ch_T0000288;gene_id=HG03009_ch_G0000104;Parent=HG03009_ch_T0000288;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000288:0;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9172754	9172840	.	+	0	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03009_ch_T0000288;gene_id=HG03009_ch_G0000104;Parent=HG03009_ch_T0000288;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000288:0;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	9172754	9172756	.	+	0	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03009_ch_T0000288;gene_id=HG03009_ch_G0000104;Parent=HG03009_ch_T0000288;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=start_codon:HG03009_ch_T0000288;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9172841	9173101	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03009_ch_T0000288;gene_id=HG03009_ch_G0000104;Parent=HG03009_ch_T0000288;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000288:0;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9173102	9173239	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03009_ch_T0000288;gene_id=HG03009_ch_G0000104;Parent=HG03009_ch_T0000288;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000288:1;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9173102	9173239	.	+	0	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03009_ch_T0000288;gene_id=HG03009_ch_G0000104;Parent=HG03009_ch_T0000288;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000288:1;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9173240	9173846	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03009_ch_T0000288;gene_id=HG03009_ch_G0000104;Parent=HG03009_ch_T0000288;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000288:1;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9173847	9173924	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03009_ch_T0000288;gene_id=HG03009_ch_G0000104;Parent=HG03009_ch_T0000288;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000288:2;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9173847	9173924	.	+	0	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03009_ch_T0000288;gene_id=HG03009_ch_G0000104;Parent=HG03009_ch_T0000288;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000288:2;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9173925	9174052	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03009_ch_T0000288;gene_id=HG03009_ch_G0000104;Parent=HG03009_ch_T0000288;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000288:2;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9174053	9174164	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03009_ch_T0000288;gene_id=HG03009_ch_G0000104;Parent=HG03009_ch_T0000288;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000288:3;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9174053	9174164	.	+	0	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03009_ch_T0000288;gene_id=HG03009_ch_G0000104;Parent=HG03009_ch_T0000288;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000288:3;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9174165	9174265	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03009_ch_T0000288;gene_id=HG03009_ch_G0000104;Parent=HG03009_ch_T0000288;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000288:3;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9174266	9174411	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03009_ch_T0000288;gene_id=HG03009_ch_G0000104;Parent=HG03009_ch_T0000288;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000288:4;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9174266	9174411	.	+	2	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03009_ch_T0000288;gene_id=HG03009_ch_G0000104;Parent=HG03009_ch_T0000288;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000288:4;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9174412	9174517	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03009_ch_T0000288;gene_id=HG03009_ch_G0000104;Parent=HG03009_ch_T0000288;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000288:4;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9174518	9174599	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03009_ch_T0000288;gene_id=HG03009_ch_G0000104;Parent=HG03009_ch_T0000288;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000288:5;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9174518	9174599	.	+	0	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03009_ch_T0000288;gene_id=HG03009_ch_G0000104;Parent=HG03009_ch_T0000288;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000288:5;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9174600	9175293	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03009_ch_T0000288;gene_id=HG03009_ch_G0000104;Parent=HG03009_ch_T0000288;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000288:5;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9175294	9175504	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03009_ch_T0000288;gene_id=HG03009_ch_G0000104;Parent=HG03009_ch_T0000288;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000288:6;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9175294	9175316	.	+	2	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03009_ch_T0000288;gene_id=HG03009_ch_G0000104;Parent=HG03009_ch_T0000288;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000288:6;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	9175314	9175316	.	+	0	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03009_ch_T0000288;gene_id=HG03009_ch_G0000104;Parent=HG03009_ch_T0000288;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=stop_codon:HG03009_ch_T0000288;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	9172708	9175504	1000	+	.	source_transcript=hg002_chrY_paternal_198.5;source_transcript_name=hg002_chrY_paternal_198.1;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.4,hg002_chrY_paternal_180.4;transcript_id=HG03009_ch_T0000289;gene_id=HG03009_ch_G0000104;Parent=HG03009_ch_G0000104;transcript_name=hg002_chrY_paternal_198.1;gene_name=TSPY1;ID=HG03009_ch_T0000289;Name=TSPY1
HG03009_chrY	CAT	exon	9172708	9173239	.	+	.	source_transcript=hg002_chrY_paternal_198.5;source_transcript_name=hg002_chrY_paternal_198.1;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.4,hg002_chrY_paternal_180.4;transcript_id=HG03009_ch_T0000289;gene_id=HG03009_ch_G0000104;Parent=HG03009_ch_T0000289;transcript_name=hg002_chrY_paternal_198.1;gene_name=TSPY1;ID=exon:HG03009_ch_T0000289:0;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9173240	9173846	.	+	.	source_transcript=hg002_chrY_paternal_198.5;source_transcript_name=hg002_chrY_paternal_198.1;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.4,hg002_chrY_paternal_180.4;transcript_id=HG03009_ch_T0000289;gene_id=HG03009_ch_G0000104;Parent=HG03009_ch_T0000289;transcript_name=hg002_chrY_paternal_198.1;gene_name=TSPY1;ID=intron:HG03009_ch_T0000289:0;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9173847	9173924	.	+	.	source_transcript=hg002_chrY_paternal_198.5;source_transcript_name=hg002_chrY_paternal_198.1;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.4,hg002_chrY_paternal_180.4;transcript_id=HG03009_ch_T0000289;gene_id=HG03009_ch_G0000104;Parent=HG03009_ch_T0000289;transcript_name=hg002_chrY_paternal_198.1;gene_name=TSPY1;ID=exon:HG03009_ch_T0000289:1;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9173925	9174052	.	+	.	source_transcript=hg002_chrY_paternal_198.5;source_transcript_name=hg002_chrY_paternal_198.1;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.4,hg002_chrY_paternal_180.4;transcript_id=HG03009_ch_T0000289;gene_id=HG03009_ch_G0000104;Parent=HG03009_ch_T0000289;transcript_name=hg002_chrY_paternal_198.1;gene_name=TSPY1;ID=intron:HG03009_ch_T0000289:1;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9174053	9174164	.	+	.	source_transcript=hg002_chrY_paternal_198.5;source_transcript_name=hg002_chrY_paternal_198.1;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.4,hg002_chrY_paternal_180.4;transcript_id=HG03009_ch_T0000289;gene_id=HG03009_ch_G0000104;Parent=HG03009_ch_T0000289;transcript_name=hg002_chrY_paternal_198.1;gene_name=TSPY1;ID=exon:HG03009_ch_T0000289:2;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9174165	9174272	.	+	.	source_transcript=hg002_chrY_paternal_198.5;source_transcript_name=hg002_chrY_paternal_198.1;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.4,hg002_chrY_paternal_180.4;transcript_id=HG03009_ch_T0000289;gene_id=HG03009_ch_G0000104;Parent=HG03009_ch_T0000289;transcript_name=hg002_chrY_paternal_198.1;gene_name=TSPY1;ID=intron:HG03009_ch_T0000289:2;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9174273	9174411	.	+	.	source_transcript=hg002_chrY_paternal_198.5;source_transcript_name=hg002_chrY_paternal_198.1;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.4,hg002_chrY_paternal_180.4;transcript_id=HG03009_ch_T0000289;gene_id=HG03009_ch_G0000104;Parent=HG03009_ch_T0000289;transcript_name=hg002_chrY_paternal_198.1;gene_name=TSPY1;ID=exon:HG03009_ch_T0000289:3;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9174412	9174506	.	+	.	source_transcript=hg002_chrY_paternal_198.5;source_transcript_name=hg002_chrY_paternal_198.1;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.4,hg002_chrY_paternal_180.4;transcript_id=HG03009_ch_T0000289;gene_id=HG03009_ch_G0000104;Parent=HG03009_ch_T0000289;transcript_name=hg002_chrY_paternal_198.1;gene_name=TSPY1;ID=intron:HG03009_ch_T0000289:3;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9174507	9174599	.	+	.	source_transcript=hg002_chrY_paternal_198.5;source_transcript_name=hg002_chrY_paternal_198.1;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.4,hg002_chrY_paternal_180.4;transcript_id=HG03009_ch_T0000289;gene_id=HG03009_ch_G0000104;Parent=HG03009_ch_T0000289;transcript_name=hg002_chrY_paternal_198.1;gene_name=TSPY1;ID=exon:HG03009_ch_T0000289:4;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9174600	9175293	.	+	.	source_transcript=hg002_chrY_paternal_198.5;source_transcript_name=hg002_chrY_paternal_198.1;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.4,hg002_chrY_paternal_180.4;transcript_id=HG03009_ch_T0000289;gene_id=HG03009_ch_G0000104;Parent=HG03009_ch_T0000289;transcript_name=hg002_chrY_paternal_198.1;gene_name=TSPY1;ID=intron:HG03009_ch_T0000289:4;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9175294	9175504	.	+	.	source_transcript=hg002_chrY_paternal_198.5;source_transcript_name=hg002_chrY_paternal_198.1;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.4,hg002_chrY_paternal_180.4;transcript_id=HG03009_ch_T0000289;gene_id=HG03009_ch_G0000104;Parent=HG03009_ch_T0000289;transcript_name=hg002_chrY_paternal_198.1;gene_name=TSPY1;ID=exon:HG03009_ch_T0000289:5;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	9184774	9190471	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_229;alternative_source_transcripts=hg002_chrY_paternal_181.1,hg002_chrY_paternal_181.1;gene_id=HG03009_ch_G0000105;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=HG03009_ch_G0000105;Name=FAM197Y2
HG03009_chrY	CAT	transcript	9184774	9190471	1000	-	.	source_transcript=hg002_chrY_paternal_229.1;source_transcript_name=hg002_chrY_paternal_229.1;source_gene=hg002_chrY_paternal_229;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_229;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_229.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_229.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_181.1,hg002_chrY_paternal_181.1;transcript_id=HG03009_ch_T0000290;gene_id=HG03009_ch_G0000105;Parent=HG03009_ch_G0000105;transcript_name=hg002_chrY_paternal_229.1;gene_name=FAM197Y2;ID=HG03009_ch_T0000290;Name=FAM197Y2
HG03009_chrY	CAT	exon	9184774	9184833	.	-	.	source_transcript=hg002_chrY_paternal_229.1;source_transcript_name=hg002_chrY_paternal_229.1;source_gene=hg002_chrY_paternal_229;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_229;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_229.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_229.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_181.1,hg002_chrY_paternal_181.1;transcript_id=HG03009_ch_T0000290;gene_id=HG03009_ch_G0000105;Parent=HG03009_ch_T0000290;transcript_name=hg002_chrY_paternal_229.1;gene_name=FAM197Y2;ID=exon:HG03009_ch_T0000290:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9184834	9188387	.	-	.	source_transcript=hg002_chrY_paternal_229.1;source_transcript_name=hg002_chrY_paternal_229.1;source_gene=hg002_chrY_paternal_229;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_229;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_229.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_229.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_181.1,hg002_chrY_paternal_181.1;transcript_id=HG03009_ch_T0000290;gene_id=HG03009_ch_G0000105;Parent=HG03009_ch_T0000290;transcript_name=hg002_chrY_paternal_229.1;gene_name=FAM197Y2;ID=intron:HG03009_ch_T0000290:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9188388	9188546	.	-	.	source_transcript=hg002_chrY_paternal_229.1;source_transcript_name=hg002_chrY_paternal_229.1;source_gene=hg002_chrY_paternal_229;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_229;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_229.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_229.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_181.1,hg002_chrY_paternal_181.1;transcript_id=HG03009_ch_T0000290;gene_id=HG03009_ch_G0000105;Parent=HG03009_ch_T0000290;transcript_name=hg002_chrY_paternal_229.1;gene_name=FAM197Y2;ID=exon:HG03009_ch_T0000290:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9188547	9190048	.	-	.	source_transcript=hg002_chrY_paternal_229.1;source_transcript_name=hg002_chrY_paternal_229.1;source_gene=hg002_chrY_paternal_229;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_229;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_229.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_229.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_181.1,hg002_chrY_paternal_181.1;transcript_id=HG03009_ch_T0000290;gene_id=HG03009_ch_G0000105;Parent=HG03009_ch_T0000290;transcript_name=hg002_chrY_paternal_229.1;gene_name=FAM197Y2;ID=intron:HG03009_ch_T0000290:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9190049	9190194	.	-	.	source_transcript=hg002_chrY_paternal_229.1;source_transcript_name=hg002_chrY_paternal_229.1;source_gene=hg002_chrY_paternal_229;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_229;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_229.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_229.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_181.1,hg002_chrY_paternal_181.1;transcript_id=HG03009_ch_T0000290;gene_id=HG03009_ch_G0000105;Parent=HG03009_ch_T0000290;transcript_name=hg002_chrY_paternal_229.1;gene_name=FAM197Y2;ID=exon:HG03009_ch_T0000290:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9190195	9190280	.	-	.	source_transcript=hg002_chrY_paternal_229.1;source_transcript_name=hg002_chrY_paternal_229.1;source_gene=hg002_chrY_paternal_229;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_229;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_229.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_229.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_181.1,hg002_chrY_paternal_181.1;transcript_id=HG03009_ch_T0000290;gene_id=HG03009_ch_G0000105;Parent=HG03009_ch_T0000290;transcript_name=hg002_chrY_paternal_229.1;gene_name=FAM197Y2;ID=intron:HG03009_ch_T0000290:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9190281	9190471	.	-	.	source_transcript=hg002_chrY_paternal_229.1;source_transcript_name=hg002_chrY_paternal_229.1;source_gene=hg002_chrY_paternal_229;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_229;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_229.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_229.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_181.1,hg002_chrY_paternal_181.1;transcript_id=HG03009_ch_T0000290;gene_id=HG03009_ch_G0000105;Parent=HG03009_ch_T0000290;transcript_name=hg002_chrY_paternal_229.1;gene_name=FAM197Y2;ID=exon:HG03009_ch_T0000290:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	9192995	9195792	.	+	.	source_gene_common_name=TSPY10;source_gene=hg002_chrY_paternal_228;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_182.1;gene_id=HG03009_ch_G0000106;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff;ID=HG03009_ch_G0000106;Name=TSPY10
HG03009_chrY	CAT	transcript	9192995	9195792	100	+	.	source_transcript=hg002_chrY_paternal_228.1;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_182.1;transcript_id=HG03009_ch_T0000291;gene_id=HG03009_ch_G0000106;Parent=HG03009_ch_G0000106;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=HG03009_ch_T0000291;Name=TSPY10
HG03009_chrY	CAT	exon	9192995	9193526	.	+	.	source_transcript=hg002_chrY_paternal_228.1;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_182.1;transcript_id=HG03009_ch_T0000291;gene_id=HG03009_ch_G0000106;Parent=HG03009_ch_T0000291;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000291:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9193041	9193526	.	+	0	source_transcript=hg002_chrY_paternal_228.1;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_182.1;transcript_id=HG03009_ch_T0000291;gene_id=HG03009_ch_G0000106;Parent=HG03009_ch_T0000291;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000291:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	9193041	9193043	.	+	0	source_transcript=hg002_chrY_paternal_228.1;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_182.1;transcript_id=HG03009_ch_T0000291;gene_id=HG03009_ch_G0000106;Parent=HG03009_ch_T0000291;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=start_codon:HG03009_ch_T0000291;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9193527	9194133	.	+	.	source_transcript=hg002_chrY_paternal_228.1;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_182.1;transcript_id=HG03009_ch_T0000291;gene_id=HG03009_ch_G0000106;Parent=HG03009_ch_T0000291;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000291:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9194134	9194211	.	+	.	source_transcript=hg002_chrY_paternal_228.1;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_182.1;transcript_id=HG03009_ch_T0000291;gene_id=HG03009_ch_G0000106;Parent=HG03009_ch_T0000291;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000291:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9194134	9194211	.	+	0	source_transcript=hg002_chrY_paternal_228.1;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_182.1;transcript_id=HG03009_ch_T0000291;gene_id=HG03009_ch_G0000106;Parent=HG03009_ch_T0000291;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000291:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9194212	9194339	.	+	.	source_transcript=hg002_chrY_paternal_228.1;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_182.1;transcript_id=HG03009_ch_T0000291;gene_id=HG03009_ch_G0000106;Parent=HG03009_ch_T0000291;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000291:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9194340	9194451	.	+	.	source_transcript=hg002_chrY_paternal_228.1;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_182.1;transcript_id=HG03009_ch_T0000291;gene_id=HG03009_ch_G0000106;Parent=HG03009_ch_T0000291;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000291:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9194340	9194451	.	+	0	source_transcript=hg002_chrY_paternal_228.1;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_182.1;transcript_id=HG03009_ch_T0000291;gene_id=HG03009_ch_G0000106;Parent=HG03009_ch_T0000291;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000291:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9194452	9194552	.	+	.	source_transcript=hg002_chrY_paternal_228.1;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_182.1;transcript_id=HG03009_ch_T0000291;gene_id=HG03009_ch_G0000106;Parent=HG03009_ch_T0000291;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000291:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9194553	9194698	.	+	.	source_transcript=hg002_chrY_paternal_228.1;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_182.1;transcript_id=HG03009_ch_T0000291;gene_id=HG03009_ch_G0000106;Parent=HG03009_ch_T0000291;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000291:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9194553	9194698	.	+	2	source_transcript=hg002_chrY_paternal_228.1;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_182.1;transcript_id=HG03009_ch_T0000291;gene_id=HG03009_ch_G0000106;Parent=HG03009_ch_T0000291;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000291:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9194699	9194804	.	+	.	source_transcript=hg002_chrY_paternal_228.1;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_182.1;transcript_id=HG03009_ch_T0000291;gene_id=HG03009_ch_G0000106;Parent=HG03009_ch_T0000291;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000291:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9194805	9194886	.	+	.	source_transcript=hg002_chrY_paternal_228.1;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_182.1;transcript_id=HG03009_ch_T0000291;gene_id=HG03009_ch_G0000106;Parent=HG03009_ch_T0000291;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000291:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9194805	9194886	.	+	0	source_transcript=hg002_chrY_paternal_228.1;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_182.1;transcript_id=HG03009_ch_T0000291;gene_id=HG03009_ch_G0000106;Parent=HG03009_ch_T0000291;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000291:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9194887	9195580	.	+	.	source_transcript=hg002_chrY_paternal_228.1;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_182.1;transcript_id=HG03009_ch_T0000291;gene_id=HG03009_ch_G0000106;Parent=HG03009_ch_T0000291;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000291:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9195581	9195792	.	+	.	source_transcript=hg002_chrY_paternal_228.1;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_182.1;transcript_id=HG03009_ch_T0000291;gene_id=HG03009_ch_G0000106;Parent=HG03009_ch_T0000291;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000291:5;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9195581	9195603	.	+	2	source_transcript=hg002_chrY_paternal_228.1;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_182.1;transcript_id=HG03009_ch_T0000291;gene_id=HG03009_ch_G0000106;Parent=HG03009_ch_T0000291;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000291:5;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	9195601	9195603	.	+	0	source_transcript=hg002_chrY_paternal_228.1;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_182.1;transcript_id=HG03009_ch_T0000291;gene_id=HG03009_ch_G0000106;Parent=HG03009_ch_T0000291;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=stop_codon:HG03009_ch_T0000291;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	9192995	9195792	100	+	.	source_transcript=hg002_chrY_paternal_228.2;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_182.2;transcript_id=HG03009_ch_T0000292;gene_id=HG03009_ch_G0000106;Parent=HG03009_ch_G0000106;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=HG03009_ch_T0000292;Name=TSPY10
HG03009_chrY	CAT	exon	9192995	9193526	.	+	.	source_transcript=hg002_chrY_paternal_228.2;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_182.2;transcript_id=HG03009_ch_T0000292;gene_id=HG03009_ch_G0000106;Parent=HG03009_ch_T0000292;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000292:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9193041	9193526	.	+	0	source_transcript=hg002_chrY_paternal_228.2;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_182.2;transcript_id=HG03009_ch_T0000292;gene_id=HG03009_ch_G0000106;Parent=HG03009_ch_T0000292;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000292:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	9193041	9193043	.	+	0	source_transcript=hg002_chrY_paternal_228.2;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_182.2;transcript_id=HG03009_ch_T0000292;gene_id=HG03009_ch_G0000106;Parent=HG03009_ch_T0000292;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=start_codon:HG03009_ch_T0000292;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9193527	9194133	.	+	.	source_transcript=hg002_chrY_paternal_228.2;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_182.2;transcript_id=HG03009_ch_T0000292;gene_id=HG03009_ch_G0000106;Parent=HG03009_ch_T0000292;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000292:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9194134	9194211	.	+	.	source_transcript=hg002_chrY_paternal_228.2;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_182.2;transcript_id=HG03009_ch_T0000292;gene_id=HG03009_ch_G0000106;Parent=HG03009_ch_T0000292;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000292:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9194134	9194211	.	+	0	source_transcript=hg002_chrY_paternal_228.2;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_182.2;transcript_id=HG03009_ch_T0000292;gene_id=HG03009_ch_G0000106;Parent=HG03009_ch_T0000292;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000292:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9194212	9194339	.	+	.	source_transcript=hg002_chrY_paternal_228.2;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_182.2;transcript_id=HG03009_ch_T0000292;gene_id=HG03009_ch_G0000106;Parent=HG03009_ch_T0000292;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000292:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9194340	9194451	.	+	.	source_transcript=hg002_chrY_paternal_228.2;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_182.2;transcript_id=HG03009_ch_T0000292;gene_id=HG03009_ch_G0000106;Parent=HG03009_ch_T0000292;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000292:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9194340	9194451	.	+	0	source_transcript=hg002_chrY_paternal_228.2;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_182.2;transcript_id=HG03009_ch_T0000292;gene_id=HG03009_ch_G0000106;Parent=HG03009_ch_T0000292;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000292:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9194452	9194552	.	+	.	source_transcript=hg002_chrY_paternal_228.2;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_182.2;transcript_id=HG03009_ch_T0000292;gene_id=HG03009_ch_G0000106;Parent=HG03009_ch_T0000292;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000292:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9194553	9194698	.	+	.	source_transcript=hg002_chrY_paternal_228.2;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_182.2;transcript_id=HG03009_ch_T0000292;gene_id=HG03009_ch_G0000106;Parent=HG03009_ch_T0000292;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000292:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9194553	9194698	.	+	2	source_transcript=hg002_chrY_paternal_228.2;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_182.2;transcript_id=HG03009_ch_T0000292;gene_id=HG03009_ch_G0000106;Parent=HG03009_ch_T0000292;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000292:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9194699	9194793	.	+	.	source_transcript=hg002_chrY_paternal_228.2;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_182.2;transcript_id=HG03009_ch_T0000292;gene_id=HG03009_ch_G0000106;Parent=HG03009_ch_T0000292;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000292:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9194794	9194886	.	+	.	source_transcript=hg002_chrY_paternal_228.2;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_182.2;transcript_id=HG03009_ch_T0000292;gene_id=HG03009_ch_G0000106;Parent=HG03009_ch_T0000292;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000292:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9194794	9194856	.	+	0	source_transcript=hg002_chrY_paternal_228.2;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_182.2;transcript_id=HG03009_ch_T0000292;gene_id=HG03009_ch_G0000106;Parent=HG03009_ch_T0000292;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000292:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	9194854	9194856	.	+	0	source_transcript=hg002_chrY_paternal_228.2;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_182.2;transcript_id=HG03009_ch_T0000292;gene_id=HG03009_ch_G0000106;Parent=HG03009_ch_T0000292;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=stop_codon:HG03009_ch_T0000292;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9194887	9195580	.	+	.	source_transcript=hg002_chrY_paternal_228.2;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_182.2;transcript_id=HG03009_ch_T0000292;gene_id=HG03009_ch_G0000106;Parent=HG03009_ch_T0000292;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000292:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9195581	9195792	.	+	.	source_transcript=hg002_chrY_paternal_228.2;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_182.2;transcript_id=HG03009_ch_T0000292;gene_id=HG03009_ch_G0000106;Parent=HG03009_ch_T0000292;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000292:5;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	9192995	9195792	100	+	.	source_transcript=hg002_chrY_paternal_228.3;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_182.3;transcript_id=HG03009_ch_T0000293;gene_id=HG03009_ch_G0000106;Parent=HG03009_ch_G0000106;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=HG03009_ch_T0000293;Name=TSPY10
HG03009_chrY	CAT	exon	9192995	9193526	.	+	.	source_transcript=hg002_chrY_paternal_228.3;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_182.3;transcript_id=HG03009_ch_T0000293;gene_id=HG03009_ch_G0000106;Parent=HG03009_ch_T0000293;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000293:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9193041	9193526	.	+	0	source_transcript=hg002_chrY_paternal_228.3;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_182.3;transcript_id=HG03009_ch_T0000293;gene_id=HG03009_ch_G0000106;Parent=HG03009_ch_T0000293;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000293:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	9193041	9193043	.	+	0	source_transcript=hg002_chrY_paternal_228.3;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_182.3;transcript_id=HG03009_ch_T0000293;gene_id=HG03009_ch_G0000106;Parent=HG03009_ch_T0000293;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=start_codon:HG03009_ch_T0000293;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9193527	9194133	.	+	.	source_transcript=hg002_chrY_paternal_228.3;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_182.3;transcript_id=HG03009_ch_T0000293;gene_id=HG03009_ch_G0000106;Parent=HG03009_ch_T0000293;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000293:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9194134	9194211	.	+	.	source_transcript=hg002_chrY_paternal_228.3;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_182.3;transcript_id=HG03009_ch_T0000293;gene_id=HG03009_ch_G0000106;Parent=HG03009_ch_T0000293;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000293:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9194134	9194211	.	+	0	source_transcript=hg002_chrY_paternal_228.3;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_182.3;transcript_id=HG03009_ch_T0000293;gene_id=HG03009_ch_G0000106;Parent=HG03009_ch_T0000293;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000293:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9194212	9194339	.	+	.	source_transcript=hg002_chrY_paternal_228.3;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_182.3;transcript_id=HG03009_ch_T0000293;gene_id=HG03009_ch_G0000106;Parent=HG03009_ch_T0000293;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000293:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9194340	9194451	.	+	.	source_transcript=hg002_chrY_paternal_228.3;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_182.3;transcript_id=HG03009_ch_T0000293;gene_id=HG03009_ch_G0000106;Parent=HG03009_ch_T0000293;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000293:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9194340	9194451	.	+	0	source_transcript=hg002_chrY_paternal_228.3;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_182.3;transcript_id=HG03009_ch_T0000293;gene_id=HG03009_ch_G0000106;Parent=HG03009_ch_T0000293;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000293:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9194452	9194559	.	+	.	source_transcript=hg002_chrY_paternal_228.3;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_182.3;transcript_id=HG03009_ch_T0000293;gene_id=HG03009_ch_G0000106;Parent=HG03009_ch_T0000293;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000293:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9194560	9194698	.	+	.	source_transcript=hg002_chrY_paternal_228.3;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_182.3;transcript_id=HG03009_ch_T0000293;gene_id=HG03009_ch_G0000106;Parent=HG03009_ch_T0000293;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000293:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9194560	9194698	.	+	2	source_transcript=hg002_chrY_paternal_228.3;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_182.3;transcript_id=HG03009_ch_T0000293;gene_id=HG03009_ch_G0000106;Parent=HG03009_ch_T0000293;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000293:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9194699	9194804	.	+	.	source_transcript=hg002_chrY_paternal_228.3;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_182.3;transcript_id=HG03009_ch_T0000293;gene_id=HG03009_ch_G0000106;Parent=HG03009_ch_T0000293;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000293:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9194805	9194886	.	+	.	source_transcript=hg002_chrY_paternal_228.3;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_182.3;transcript_id=HG03009_ch_T0000293;gene_id=HG03009_ch_G0000106;Parent=HG03009_ch_T0000293;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000293:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9194805	9194856	.	+	1	source_transcript=hg002_chrY_paternal_228.3;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_182.3;transcript_id=HG03009_ch_T0000293;gene_id=HG03009_ch_G0000106;Parent=HG03009_ch_T0000293;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000293:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	9194854	9194856	.	+	0	source_transcript=hg002_chrY_paternal_228.3;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_182.3;transcript_id=HG03009_ch_T0000293;gene_id=HG03009_ch_G0000106;Parent=HG03009_ch_T0000293;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=stop_codon:HG03009_ch_T0000293;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9194887	9195580	.	+	.	source_transcript=hg002_chrY_paternal_228.3;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_182.3;transcript_id=HG03009_ch_T0000293;gene_id=HG03009_ch_G0000106;Parent=HG03009_ch_T0000293;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000293:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9195581	9195792	.	+	.	source_transcript=hg002_chrY_paternal_228.3;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_182.3;transcript_id=HG03009_ch_T0000293;gene_id=HG03009_ch_G0000106;Parent=HG03009_ch_T0000293;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000293:5;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	9192995	9195792	1000	+	.	source_transcript=hg002_chrY_paternal_228.4;source_transcript_name=hg002_chrY_paternal_228.1;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_228.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.4,hg002_chrY_paternal_182.4;transcript_id=HG03009_ch_T0000294;gene_id=HG03009_ch_G0000106;Parent=HG03009_ch_G0000106;transcript_name=hg002_chrY_paternal_228.1;gene_name=TSPY10;ID=HG03009_ch_T0000294;Name=TSPY10
HG03009_chrY	CAT	exon	9192995	9193526	.	+	.	source_transcript=hg002_chrY_paternal_228.4;source_transcript_name=hg002_chrY_paternal_228.1;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_228.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.4,hg002_chrY_paternal_182.4;transcript_id=HG03009_ch_T0000294;gene_id=HG03009_ch_G0000106;Parent=HG03009_ch_T0000294;transcript_name=hg002_chrY_paternal_228.1;gene_name=TSPY10;ID=exon:HG03009_ch_T0000294:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9193527	9194133	.	+	.	source_transcript=hg002_chrY_paternal_228.4;source_transcript_name=hg002_chrY_paternal_228.1;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_228.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.4,hg002_chrY_paternal_182.4;transcript_id=HG03009_ch_T0000294;gene_id=HG03009_ch_G0000106;Parent=HG03009_ch_T0000294;transcript_name=hg002_chrY_paternal_228.1;gene_name=TSPY10;ID=intron:HG03009_ch_T0000294:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9194134	9194211	.	+	.	source_transcript=hg002_chrY_paternal_228.4;source_transcript_name=hg002_chrY_paternal_228.1;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_228.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.4,hg002_chrY_paternal_182.4;transcript_id=HG03009_ch_T0000294;gene_id=HG03009_ch_G0000106;Parent=HG03009_ch_T0000294;transcript_name=hg002_chrY_paternal_228.1;gene_name=TSPY10;ID=exon:HG03009_ch_T0000294:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9194212	9194339	.	+	.	source_transcript=hg002_chrY_paternal_228.4;source_transcript_name=hg002_chrY_paternal_228.1;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_228.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.4,hg002_chrY_paternal_182.4;transcript_id=HG03009_ch_T0000294;gene_id=HG03009_ch_G0000106;Parent=HG03009_ch_T0000294;transcript_name=hg002_chrY_paternal_228.1;gene_name=TSPY10;ID=intron:HG03009_ch_T0000294:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9194340	9194451	.	+	.	source_transcript=hg002_chrY_paternal_228.4;source_transcript_name=hg002_chrY_paternal_228.1;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_228.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.4,hg002_chrY_paternal_182.4;transcript_id=HG03009_ch_T0000294;gene_id=HG03009_ch_G0000106;Parent=HG03009_ch_T0000294;transcript_name=hg002_chrY_paternal_228.1;gene_name=TSPY10;ID=exon:HG03009_ch_T0000294:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9194452	9194559	.	+	.	source_transcript=hg002_chrY_paternal_228.4;source_transcript_name=hg002_chrY_paternal_228.1;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_228.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.4,hg002_chrY_paternal_182.4;transcript_id=HG03009_ch_T0000294;gene_id=HG03009_ch_G0000106;Parent=HG03009_ch_T0000294;transcript_name=hg002_chrY_paternal_228.1;gene_name=TSPY10;ID=intron:HG03009_ch_T0000294:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9194560	9194698	.	+	.	source_transcript=hg002_chrY_paternal_228.4;source_transcript_name=hg002_chrY_paternal_228.1;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_228.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.4,hg002_chrY_paternal_182.4;transcript_id=HG03009_ch_T0000294;gene_id=HG03009_ch_G0000106;Parent=HG03009_ch_T0000294;transcript_name=hg002_chrY_paternal_228.1;gene_name=TSPY10;ID=exon:HG03009_ch_T0000294:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9194699	9194793	.	+	.	source_transcript=hg002_chrY_paternal_228.4;source_transcript_name=hg002_chrY_paternal_228.1;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_228.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.4,hg002_chrY_paternal_182.4;transcript_id=HG03009_ch_T0000294;gene_id=HG03009_ch_G0000106;Parent=HG03009_ch_T0000294;transcript_name=hg002_chrY_paternal_228.1;gene_name=TSPY10;ID=intron:HG03009_ch_T0000294:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9194794	9194886	.	+	.	source_transcript=hg002_chrY_paternal_228.4;source_transcript_name=hg002_chrY_paternal_228.1;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_228.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.4,hg002_chrY_paternal_182.4;transcript_id=HG03009_ch_T0000294;gene_id=HG03009_ch_G0000106;Parent=HG03009_ch_T0000294;transcript_name=hg002_chrY_paternal_228.1;gene_name=TSPY10;ID=exon:HG03009_ch_T0000294:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9194887	9195580	.	+	.	source_transcript=hg002_chrY_paternal_228.4;source_transcript_name=hg002_chrY_paternal_228.1;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_228.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.4,hg002_chrY_paternal_182.4;transcript_id=HG03009_ch_T0000294;gene_id=HG03009_ch_G0000106;Parent=HG03009_ch_T0000294;transcript_name=hg002_chrY_paternal_228.1;gene_name=TSPY10;ID=intron:HG03009_ch_T0000294:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9195581	9195792	.	+	.	source_transcript=hg002_chrY_paternal_228.4;source_transcript_name=hg002_chrY_paternal_228.1;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_228.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.4,hg002_chrY_paternal_182.4;transcript_id=HG03009_ch_T0000294;gene_id=HG03009_ch_G0000106;Parent=HG03009_ch_T0000294;transcript_name=hg002_chrY_paternal_228.1;gene_name=TSPY10;ID=exon:HG03009_ch_T0000294:5;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	9205076	9210762	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_207;alternative_source_transcripts=hg002_chrY_paternal_183.1,hg002_chrY_paternal_183.1;gene_id=HG03009_ch_G0000107;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=HG03009_ch_G0000107;Name=FAM197Y2
HG03009_chrY	CAT	transcript	9205076	9210762	1000	-	.	source_transcript=hg002_chrY_paternal_207.1;source_transcript_name=hg002_chrY_paternal_207.1;source_gene=hg002_chrY_paternal_207;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_207;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_207.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_207.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_183.1,hg002_chrY_paternal_183.1;transcript_id=HG03009_ch_T0000295;gene_id=HG03009_ch_G0000107;Parent=HG03009_ch_G0000107;transcript_name=hg002_chrY_paternal_207.1;gene_name=FAM197Y2;ID=HG03009_ch_T0000295;Name=FAM197Y2
HG03009_chrY	CAT	exon	9205076	9205135	.	-	.	source_transcript=hg002_chrY_paternal_207.1;source_transcript_name=hg002_chrY_paternal_207.1;source_gene=hg002_chrY_paternal_207;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_207;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_207.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_207.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_183.1,hg002_chrY_paternal_183.1;transcript_id=HG03009_ch_T0000295;gene_id=HG03009_ch_G0000107;Parent=HG03009_ch_T0000295;transcript_name=hg002_chrY_paternal_207.1;gene_name=FAM197Y2;ID=exon:HG03009_ch_T0000295:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9205136	9208684	.	-	.	source_transcript=hg002_chrY_paternal_207.1;source_transcript_name=hg002_chrY_paternal_207.1;source_gene=hg002_chrY_paternal_207;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_207;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_207.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_207.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_183.1,hg002_chrY_paternal_183.1;transcript_id=HG03009_ch_T0000295;gene_id=HG03009_ch_G0000107;Parent=HG03009_ch_T0000295;transcript_name=hg002_chrY_paternal_207.1;gene_name=FAM197Y2;ID=intron:HG03009_ch_T0000295:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9208685	9208843	.	-	.	source_transcript=hg002_chrY_paternal_207.1;source_transcript_name=hg002_chrY_paternal_207.1;source_gene=hg002_chrY_paternal_207;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_207;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_207.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_207.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_183.1,hg002_chrY_paternal_183.1;transcript_id=HG03009_ch_T0000295;gene_id=HG03009_ch_G0000107;Parent=HG03009_ch_T0000295;transcript_name=hg002_chrY_paternal_207.1;gene_name=FAM197Y2;ID=exon:HG03009_ch_T0000295:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9208844	9210339	.	-	.	source_transcript=hg002_chrY_paternal_207.1;source_transcript_name=hg002_chrY_paternal_207.1;source_gene=hg002_chrY_paternal_207;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_207;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_207.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_207.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_183.1,hg002_chrY_paternal_183.1;transcript_id=HG03009_ch_T0000295;gene_id=HG03009_ch_G0000107;Parent=HG03009_ch_T0000295;transcript_name=hg002_chrY_paternal_207.1;gene_name=FAM197Y2;ID=intron:HG03009_ch_T0000295:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9210340	9210485	.	-	.	source_transcript=hg002_chrY_paternal_207.1;source_transcript_name=hg002_chrY_paternal_207.1;source_gene=hg002_chrY_paternal_207;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_207;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_207.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_207.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_183.1,hg002_chrY_paternal_183.1;transcript_id=HG03009_ch_T0000295;gene_id=HG03009_ch_G0000107;Parent=HG03009_ch_T0000295;transcript_name=hg002_chrY_paternal_207.1;gene_name=FAM197Y2;ID=exon:HG03009_ch_T0000295:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9210486	9210571	.	-	.	source_transcript=hg002_chrY_paternal_207.1;source_transcript_name=hg002_chrY_paternal_207.1;source_gene=hg002_chrY_paternal_207;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_207;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_207.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_207.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_183.1,hg002_chrY_paternal_183.1;transcript_id=HG03009_ch_T0000295;gene_id=HG03009_ch_G0000107;Parent=HG03009_ch_T0000295;transcript_name=hg002_chrY_paternal_207.1;gene_name=FAM197Y2;ID=intron:HG03009_ch_T0000295:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9210572	9210762	.	-	.	source_transcript=hg002_chrY_paternal_207.1;source_transcript_name=hg002_chrY_paternal_207.1;source_gene=hg002_chrY_paternal_207;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_207;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_207.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_207.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_183.1,hg002_chrY_paternal_183.1;transcript_id=HG03009_ch_T0000295;gene_id=HG03009_ch_G0000107;Parent=HG03009_ch_T0000295;transcript_name=hg002_chrY_paternal_207.1;gene_name=FAM197Y2;ID=exon:HG03009_ch_T0000295:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	9213286	9216100	.	+	.	source_gene_common_name=TSPY4;source_gene=hg002_chrY_paternal_206;alternative_source_transcripts=hg002_chrY_paternal_184.1,hg002_chrY_paternal_184.1;gene_id=HG03009_ch_G0000108;gene_biotype=protein_coding;gene_name=TSPY4;gene_sources=liftoff;ID=HG03009_ch_G0000108;Name=TSPY4
HG03009_chrY	CAT	transcript	9213286	9216100	100	+	.	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_184.1,hg002_chrY_paternal_184.1;transcript_id=HG03009_ch_T0000296;gene_id=HG03009_ch_G0000108;Parent=HG03009_ch_G0000108;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=HG03009_ch_T0000296;Name=TSPY4
HG03009_chrY	CAT	exon	9213286	9213835	.	+	.	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_184.1,hg002_chrY_paternal_184.1;transcript_id=HG03009_ch_T0000296;gene_id=HG03009_ch_G0000108;Parent=HG03009_ch_T0000296;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000296:0;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9213332	9213835	.	+	0	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_184.1,hg002_chrY_paternal_184.1;transcript_id=HG03009_ch_T0000296;gene_id=HG03009_ch_G0000108;Parent=HG03009_ch_T0000296;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:HG03009_ch_T0000296:0;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	9213332	9213334	.	+	0	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_184.1,hg002_chrY_paternal_184.1;transcript_id=HG03009_ch_T0000296;gene_id=HG03009_ch_G0000108;Parent=HG03009_ch_T0000296;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=start_codon:HG03009_ch_T0000296;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9213836	9214442	.	+	.	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_184.1,hg002_chrY_paternal_184.1;transcript_id=HG03009_ch_T0000296;gene_id=HG03009_ch_G0000108;Parent=HG03009_ch_T0000296;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:HG03009_ch_T0000296:0;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9214443	9214520	.	+	.	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_184.1,hg002_chrY_paternal_184.1;transcript_id=HG03009_ch_T0000296;gene_id=HG03009_ch_G0000108;Parent=HG03009_ch_T0000296;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000296:1;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9214443	9214520	.	+	0	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_184.1,hg002_chrY_paternal_184.1;transcript_id=HG03009_ch_T0000296;gene_id=HG03009_ch_G0000108;Parent=HG03009_ch_T0000296;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:HG03009_ch_T0000296:1;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9214521	9214648	.	+	.	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_184.1,hg002_chrY_paternal_184.1;transcript_id=HG03009_ch_T0000296;gene_id=HG03009_ch_G0000108;Parent=HG03009_ch_T0000296;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:HG03009_ch_T0000296:1;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9214649	9214760	.	+	.	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_184.1,hg002_chrY_paternal_184.1;transcript_id=HG03009_ch_T0000296;gene_id=HG03009_ch_G0000108;Parent=HG03009_ch_T0000296;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000296:2;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9214649	9214760	.	+	0	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_184.1,hg002_chrY_paternal_184.1;transcript_id=HG03009_ch_T0000296;gene_id=HG03009_ch_G0000108;Parent=HG03009_ch_T0000296;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:HG03009_ch_T0000296:2;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9214761	9214861	.	+	.	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_184.1,hg002_chrY_paternal_184.1;transcript_id=HG03009_ch_T0000296;gene_id=HG03009_ch_G0000108;Parent=HG03009_ch_T0000296;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:HG03009_ch_T0000296:2;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9214862	9215007	.	+	.	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_184.1,hg002_chrY_paternal_184.1;transcript_id=HG03009_ch_T0000296;gene_id=HG03009_ch_G0000108;Parent=HG03009_ch_T0000296;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000296:3;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9214862	9215007	.	+	2	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_184.1,hg002_chrY_paternal_184.1;transcript_id=HG03009_ch_T0000296;gene_id=HG03009_ch_G0000108;Parent=HG03009_ch_T0000296;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:HG03009_ch_T0000296:3;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9215008	9215113	.	+	.	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_184.1,hg002_chrY_paternal_184.1;transcript_id=HG03009_ch_T0000296;gene_id=HG03009_ch_G0000108;Parent=HG03009_ch_T0000296;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:HG03009_ch_T0000296:3;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9215114	9215195	.	+	.	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_184.1,hg002_chrY_paternal_184.1;transcript_id=HG03009_ch_T0000296;gene_id=HG03009_ch_G0000108;Parent=HG03009_ch_T0000296;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000296:4;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9215114	9215195	.	+	0	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_184.1,hg002_chrY_paternal_184.1;transcript_id=HG03009_ch_T0000296;gene_id=HG03009_ch_G0000108;Parent=HG03009_ch_T0000296;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:HG03009_ch_T0000296:4;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9215196	9215889	.	+	.	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_184.1,hg002_chrY_paternal_184.1;transcript_id=HG03009_ch_T0000296;gene_id=HG03009_ch_G0000108;Parent=HG03009_ch_T0000296;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:HG03009_ch_T0000296:4;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9215890	9216100	.	+	.	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_184.1,hg002_chrY_paternal_184.1;transcript_id=HG03009_ch_T0000296;gene_id=HG03009_ch_G0000108;Parent=HG03009_ch_T0000296;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000296:5;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9215890	9215912	.	+	2	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_184.1,hg002_chrY_paternal_184.1;transcript_id=HG03009_ch_T0000296;gene_id=HG03009_ch_G0000108;Parent=HG03009_ch_T0000296;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:HG03009_ch_T0000296:5;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	9215910	9215912	.	+	0	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_184.1,hg002_chrY_paternal_184.1;transcript_id=HG03009_ch_T0000296;gene_id=HG03009_ch_G0000108;Parent=HG03009_ch_T0000296;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=stop_codon:HG03009_ch_T0000296;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	9213286	9216100	100	+	.	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_184.2,hg002_chrY_paternal_184.2;transcript_id=HG03009_ch_T0000297;gene_id=HG03009_ch_G0000108;Parent=HG03009_ch_G0000108;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=HG03009_ch_T0000297;Name=TSPY4
HG03009_chrY	CAT	exon	9213286	9213835	.	+	.	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_184.2,hg002_chrY_paternal_184.2;transcript_id=HG03009_ch_T0000297;gene_id=HG03009_ch_G0000108;Parent=HG03009_ch_T0000297;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000297:0;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9213332	9213835	.	+	0	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_184.2,hg002_chrY_paternal_184.2;transcript_id=HG03009_ch_T0000297;gene_id=HG03009_ch_G0000108;Parent=HG03009_ch_T0000297;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:HG03009_ch_T0000297:0;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	9213332	9213334	.	+	0	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_184.2,hg002_chrY_paternal_184.2;transcript_id=HG03009_ch_T0000297;gene_id=HG03009_ch_G0000108;Parent=HG03009_ch_T0000297;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=start_codon:HG03009_ch_T0000297;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9213836	9214442	.	+	.	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_184.2,hg002_chrY_paternal_184.2;transcript_id=HG03009_ch_T0000297;gene_id=HG03009_ch_G0000108;Parent=HG03009_ch_T0000297;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:HG03009_ch_T0000297:0;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9214443	9214520	.	+	.	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_184.2,hg002_chrY_paternal_184.2;transcript_id=HG03009_ch_T0000297;gene_id=HG03009_ch_G0000108;Parent=HG03009_ch_T0000297;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000297:1;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9214443	9214520	.	+	0	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_184.2,hg002_chrY_paternal_184.2;transcript_id=HG03009_ch_T0000297;gene_id=HG03009_ch_G0000108;Parent=HG03009_ch_T0000297;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:HG03009_ch_T0000297:1;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9214521	9214648	.	+	.	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_184.2,hg002_chrY_paternal_184.2;transcript_id=HG03009_ch_T0000297;gene_id=HG03009_ch_G0000108;Parent=HG03009_ch_T0000297;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:HG03009_ch_T0000297:1;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9214649	9214760	.	+	.	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_184.2,hg002_chrY_paternal_184.2;transcript_id=HG03009_ch_T0000297;gene_id=HG03009_ch_G0000108;Parent=HG03009_ch_T0000297;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000297:2;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9214649	9214760	.	+	0	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_184.2,hg002_chrY_paternal_184.2;transcript_id=HG03009_ch_T0000297;gene_id=HG03009_ch_G0000108;Parent=HG03009_ch_T0000297;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:HG03009_ch_T0000297:2;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9214761	9214861	.	+	.	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_184.2,hg002_chrY_paternal_184.2;transcript_id=HG03009_ch_T0000297;gene_id=HG03009_ch_G0000108;Parent=HG03009_ch_T0000297;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:HG03009_ch_T0000297:2;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9214862	9215007	.	+	.	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_184.2,hg002_chrY_paternal_184.2;transcript_id=HG03009_ch_T0000297;gene_id=HG03009_ch_G0000108;Parent=HG03009_ch_T0000297;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000297:3;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9214862	9215007	.	+	2	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_184.2,hg002_chrY_paternal_184.2;transcript_id=HG03009_ch_T0000297;gene_id=HG03009_ch_G0000108;Parent=HG03009_ch_T0000297;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:HG03009_ch_T0000297:3;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9215008	9215102	.	+	.	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_184.2,hg002_chrY_paternal_184.2;transcript_id=HG03009_ch_T0000297;gene_id=HG03009_ch_G0000108;Parent=HG03009_ch_T0000297;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:HG03009_ch_T0000297:3;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9215103	9215195	.	+	.	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_184.2,hg002_chrY_paternal_184.2;transcript_id=HG03009_ch_T0000297;gene_id=HG03009_ch_G0000108;Parent=HG03009_ch_T0000297;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000297:4;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9215103	9215165	.	+	0	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_184.2,hg002_chrY_paternal_184.2;transcript_id=HG03009_ch_T0000297;gene_id=HG03009_ch_G0000108;Parent=HG03009_ch_T0000297;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:HG03009_ch_T0000297:4;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	9215163	9215165	.	+	0	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_184.2,hg002_chrY_paternal_184.2;transcript_id=HG03009_ch_T0000297;gene_id=HG03009_ch_G0000108;Parent=HG03009_ch_T0000297;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=stop_codon:HG03009_ch_T0000297;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9215196	9215889	.	+	.	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_184.2,hg002_chrY_paternal_184.2;transcript_id=HG03009_ch_T0000297;gene_id=HG03009_ch_G0000108;Parent=HG03009_ch_T0000297;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:HG03009_ch_T0000297:4;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9215890	9216100	.	+	.	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_184.2,hg002_chrY_paternal_184.2;transcript_id=HG03009_ch_T0000297;gene_id=HG03009_ch_G0000108;Parent=HG03009_ch_T0000297;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000297:5;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	9213286	9216100	100	+	.	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_184.3,hg002_chrY_paternal_184.3;transcript_id=HG03009_ch_T0000298;gene_id=HG03009_ch_G0000108;Parent=HG03009_ch_G0000108;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=HG03009_ch_T0000298;Name=TSPY4
HG03009_chrY	CAT	exon	9213286	9213835	.	+	.	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_184.3,hg002_chrY_paternal_184.3;transcript_id=HG03009_ch_T0000298;gene_id=HG03009_ch_G0000108;Parent=HG03009_ch_T0000298;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000298:0;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9213332	9213835	.	+	0	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_184.3,hg002_chrY_paternal_184.3;transcript_id=HG03009_ch_T0000298;gene_id=HG03009_ch_G0000108;Parent=HG03009_ch_T0000298;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:HG03009_ch_T0000298:0;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	9213332	9213334	.	+	0	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_184.3,hg002_chrY_paternal_184.3;transcript_id=HG03009_ch_T0000298;gene_id=HG03009_ch_G0000108;Parent=HG03009_ch_T0000298;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=start_codon:HG03009_ch_T0000298;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9213836	9214442	.	+	.	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_184.3,hg002_chrY_paternal_184.3;transcript_id=HG03009_ch_T0000298;gene_id=HG03009_ch_G0000108;Parent=HG03009_ch_T0000298;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:HG03009_ch_T0000298:0;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9214443	9214520	.	+	.	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_184.3,hg002_chrY_paternal_184.3;transcript_id=HG03009_ch_T0000298;gene_id=HG03009_ch_G0000108;Parent=HG03009_ch_T0000298;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000298:1;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9214443	9214520	.	+	0	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_184.3,hg002_chrY_paternal_184.3;transcript_id=HG03009_ch_T0000298;gene_id=HG03009_ch_G0000108;Parent=HG03009_ch_T0000298;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:HG03009_ch_T0000298:1;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9214521	9214648	.	+	.	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_184.3,hg002_chrY_paternal_184.3;transcript_id=HG03009_ch_T0000298;gene_id=HG03009_ch_G0000108;Parent=HG03009_ch_T0000298;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:HG03009_ch_T0000298:1;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9214649	9214760	.	+	.	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_184.3,hg002_chrY_paternal_184.3;transcript_id=HG03009_ch_T0000298;gene_id=HG03009_ch_G0000108;Parent=HG03009_ch_T0000298;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000298:2;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9214649	9214760	.	+	0	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_184.3,hg002_chrY_paternal_184.3;transcript_id=HG03009_ch_T0000298;gene_id=HG03009_ch_G0000108;Parent=HG03009_ch_T0000298;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:HG03009_ch_T0000298:2;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9214761	9214868	.	+	.	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_184.3,hg002_chrY_paternal_184.3;transcript_id=HG03009_ch_T0000298;gene_id=HG03009_ch_G0000108;Parent=HG03009_ch_T0000298;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:HG03009_ch_T0000298:2;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9214869	9215007	.	+	.	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_184.3,hg002_chrY_paternal_184.3;transcript_id=HG03009_ch_T0000298;gene_id=HG03009_ch_G0000108;Parent=HG03009_ch_T0000298;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000298:3;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9214869	9215007	.	+	2	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_184.3,hg002_chrY_paternal_184.3;transcript_id=HG03009_ch_T0000298;gene_id=HG03009_ch_G0000108;Parent=HG03009_ch_T0000298;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:HG03009_ch_T0000298:3;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9215008	9215113	.	+	.	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_184.3,hg002_chrY_paternal_184.3;transcript_id=HG03009_ch_T0000298;gene_id=HG03009_ch_G0000108;Parent=HG03009_ch_T0000298;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:HG03009_ch_T0000298:3;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9215114	9215195	.	+	.	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_184.3,hg002_chrY_paternal_184.3;transcript_id=HG03009_ch_T0000298;gene_id=HG03009_ch_G0000108;Parent=HG03009_ch_T0000298;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000298:4;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9215114	9215165	.	+	1	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_184.3,hg002_chrY_paternal_184.3;transcript_id=HG03009_ch_T0000298;gene_id=HG03009_ch_G0000108;Parent=HG03009_ch_T0000298;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:HG03009_ch_T0000298:4;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	9215163	9215165	.	+	0	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_184.3,hg002_chrY_paternal_184.3;transcript_id=HG03009_ch_T0000298;gene_id=HG03009_ch_G0000108;Parent=HG03009_ch_T0000298;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=stop_codon:HG03009_ch_T0000298;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9215196	9215889	.	+	.	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_184.3,hg002_chrY_paternal_184.3;transcript_id=HG03009_ch_T0000298;gene_id=HG03009_ch_G0000108;Parent=HG03009_ch_T0000298;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:HG03009_ch_T0000298:4;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9215890	9216100	.	+	.	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_184.3,hg002_chrY_paternal_184.3;transcript_id=HG03009_ch_T0000298;gene_id=HG03009_ch_G0000108;Parent=HG03009_ch_T0000298;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000298:5;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	9213286	9216100	1000	+	.	source_transcript=hg002_chrY_paternal_206.4;source_transcript_name=hg002_chrY_paternal_206.1;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_206.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_184.4,hg002_chrY_paternal_184.4;transcript_id=HG03009_ch_T0000299;gene_id=HG03009_ch_G0000108;Parent=HG03009_ch_G0000108;transcript_name=hg002_chrY_paternal_206.1;gene_name=TSPY4;ID=HG03009_ch_T0000299;Name=TSPY4
HG03009_chrY	CAT	exon	9213286	9213835	.	+	.	source_transcript=hg002_chrY_paternal_206.4;source_transcript_name=hg002_chrY_paternal_206.1;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_206.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_184.4,hg002_chrY_paternal_184.4;transcript_id=HG03009_ch_T0000299;gene_id=HG03009_ch_G0000108;Parent=HG03009_ch_T0000299;transcript_name=hg002_chrY_paternal_206.1;gene_name=TSPY4;ID=exon:HG03009_ch_T0000299:0;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9213836	9214442	.	+	.	source_transcript=hg002_chrY_paternal_206.4;source_transcript_name=hg002_chrY_paternal_206.1;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_206.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_184.4,hg002_chrY_paternal_184.4;transcript_id=HG03009_ch_T0000299;gene_id=HG03009_ch_G0000108;Parent=HG03009_ch_T0000299;transcript_name=hg002_chrY_paternal_206.1;gene_name=TSPY4;ID=intron:HG03009_ch_T0000299:0;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9214443	9214520	.	+	.	source_transcript=hg002_chrY_paternal_206.4;source_transcript_name=hg002_chrY_paternal_206.1;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_206.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_184.4,hg002_chrY_paternal_184.4;transcript_id=HG03009_ch_T0000299;gene_id=HG03009_ch_G0000108;Parent=HG03009_ch_T0000299;transcript_name=hg002_chrY_paternal_206.1;gene_name=TSPY4;ID=exon:HG03009_ch_T0000299:1;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9214521	9214648	.	+	.	source_transcript=hg002_chrY_paternal_206.4;source_transcript_name=hg002_chrY_paternal_206.1;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_206.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_184.4,hg002_chrY_paternal_184.4;transcript_id=HG03009_ch_T0000299;gene_id=HG03009_ch_G0000108;Parent=HG03009_ch_T0000299;transcript_name=hg002_chrY_paternal_206.1;gene_name=TSPY4;ID=intron:HG03009_ch_T0000299:1;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9214649	9214760	.	+	.	source_transcript=hg002_chrY_paternal_206.4;source_transcript_name=hg002_chrY_paternal_206.1;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_206.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_184.4,hg002_chrY_paternal_184.4;transcript_id=HG03009_ch_T0000299;gene_id=HG03009_ch_G0000108;Parent=HG03009_ch_T0000299;transcript_name=hg002_chrY_paternal_206.1;gene_name=TSPY4;ID=exon:HG03009_ch_T0000299:2;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9214761	9214868	.	+	.	source_transcript=hg002_chrY_paternal_206.4;source_transcript_name=hg002_chrY_paternal_206.1;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_206.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_184.4,hg002_chrY_paternal_184.4;transcript_id=HG03009_ch_T0000299;gene_id=HG03009_ch_G0000108;Parent=HG03009_ch_T0000299;transcript_name=hg002_chrY_paternal_206.1;gene_name=TSPY4;ID=intron:HG03009_ch_T0000299:2;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9214869	9215007	.	+	.	source_transcript=hg002_chrY_paternal_206.4;source_transcript_name=hg002_chrY_paternal_206.1;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_206.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_184.4,hg002_chrY_paternal_184.4;transcript_id=HG03009_ch_T0000299;gene_id=HG03009_ch_G0000108;Parent=HG03009_ch_T0000299;transcript_name=hg002_chrY_paternal_206.1;gene_name=TSPY4;ID=exon:HG03009_ch_T0000299:3;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9215008	9215102	.	+	.	source_transcript=hg002_chrY_paternal_206.4;source_transcript_name=hg002_chrY_paternal_206.1;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_206.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_184.4,hg002_chrY_paternal_184.4;transcript_id=HG03009_ch_T0000299;gene_id=HG03009_ch_G0000108;Parent=HG03009_ch_T0000299;transcript_name=hg002_chrY_paternal_206.1;gene_name=TSPY4;ID=intron:HG03009_ch_T0000299:3;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9215103	9215195	.	+	.	source_transcript=hg002_chrY_paternal_206.4;source_transcript_name=hg002_chrY_paternal_206.1;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_206.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_184.4,hg002_chrY_paternal_184.4;transcript_id=HG03009_ch_T0000299;gene_id=HG03009_ch_G0000108;Parent=HG03009_ch_T0000299;transcript_name=hg002_chrY_paternal_206.1;gene_name=TSPY4;ID=exon:HG03009_ch_T0000299:4;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9215196	9215889	.	+	.	source_transcript=hg002_chrY_paternal_206.4;source_transcript_name=hg002_chrY_paternal_206.1;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_206.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_184.4,hg002_chrY_paternal_184.4;transcript_id=HG03009_ch_T0000299;gene_id=HG03009_ch_G0000108;Parent=HG03009_ch_T0000299;transcript_name=hg002_chrY_paternal_206.1;gene_name=TSPY4;ID=intron:HG03009_ch_T0000299:4;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9215890	9216100	.	+	.	source_transcript=hg002_chrY_paternal_206.4;source_transcript_name=hg002_chrY_paternal_206.1;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_206.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_184.4,hg002_chrY_paternal_184.4;transcript_id=HG03009_ch_T0000299;gene_id=HG03009_ch_G0000108;Parent=HG03009_ch_T0000299;transcript_name=hg002_chrY_paternal_206.1;gene_name=TSPY4;ID=exon:HG03009_ch_T0000299:5;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	9225385	9230985	.	-	.	source_gene_common_name=FAM197Y4;source_gene=hg002_chrY_paternal_223;gene_id=HG03009_ch_G0000109;gene_biotype=lncRNA;gene_name=FAM197Y4;gene_sources=liftoff;ID=HG03009_ch_G0000109;Name=FAM197Y4
HG03009_chrY	CAT	transcript	9225385	9230985	1000	-	.	source_transcript=hg002_chrY_paternal_223.1;source_transcript_name=hg002_chrY_paternal_223.1;source_gene=hg002_chrY_paternal_223;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_223;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_223.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_223.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=HG03009_ch_T0000300;gene_id=HG03009_ch_G0000109;Parent=HG03009_ch_G0000109;transcript_name=hg002_chrY_paternal_223.1;gene_name=FAM197Y4;ID=HG03009_ch_T0000300;Name=FAM197Y4
HG03009_chrY	CAT	exon	9225385	9225444	.	-	.	source_transcript=hg002_chrY_paternal_223.1;source_transcript_name=hg002_chrY_paternal_223.1;source_gene=hg002_chrY_paternal_223;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_223;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_223.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_223.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=HG03009_ch_T0000300;gene_id=HG03009_ch_G0000109;Parent=HG03009_ch_T0000300;transcript_name=hg002_chrY_paternal_223.1;gene_name=FAM197Y4;ID=exon:HG03009_ch_T0000300:0;Name=FAM197Y4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9225445	9228998	.	-	.	source_transcript=hg002_chrY_paternal_223.1;source_transcript_name=hg002_chrY_paternal_223.1;source_gene=hg002_chrY_paternal_223;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_223;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_223.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_223.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=HG03009_ch_T0000300;gene_id=HG03009_ch_G0000109;Parent=HG03009_ch_T0000300;transcript_name=hg002_chrY_paternal_223.1;gene_name=FAM197Y4;ID=intron:HG03009_ch_T0000300:0;Name=FAM197Y4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9228999	9229157	.	-	.	source_transcript=hg002_chrY_paternal_223.1;source_transcript_name=hg002_chrY_paternal_223.1;source_gene=hg002_chrY_paternal_223;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_223;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_223.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_223.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=HG03009_ch_T0000300;gene_id=HG03009_ch_G0000109;Parent=HG03009_ch_T0000300;transcript_name=hg002_chrY_paternal_223.1;gene_name=FAM197Y4;ID=exon:HG03009_ch_T0000300:1;Name=FAM197Y4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9229158	9230651	.	-	.	source_transcript=hg002_chrY_paternal_223.1;source_transcript_name=hg002_chrY_paternal_223.1;source_gene=hg002_chrY_paternal_223;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_223;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_223.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_223.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=HG03009_ch_T0000300;gene_id=HG03009_ch_G0000109;Parent=HG03009_ch_T0000300;transcript_name=hg002_chrY_paternal_223.1;gene_name=FAM197Y4;ID=intron:HG03009_ch_T0000300:1;Name=FAM197Y4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9230652	9230797	.	-	.	source_transcript=hg002_chrY_paternal_223.1;source_transcript_name=hg002_chrY_paternal_223.1;source_gene=hg002_chrY_paternal_223;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_223;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_223.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_223.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=HG03009_ch_T0000300;gene_id=HG03009_ch_G0000109;Parent=HG03009_ch_T0000300;transcript_name=hg002_chrY_paternal_223.1;gene_name=FAM197Y4;ID=exon:HG03009_ch_T0000300:2;Name=FAM197Y4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9230798	9230883	.	-	.	source_transcript=hg002_chrY_paternal_223.1;source_transcript_name=hg002_chrY_paternal_223.1;source_gene=hg002_chrY_paternal_223;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_223;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_223.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_223.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=HG03009_ch_T0000300;gene_id=HG03009_ch_G0000109;Parent=HG03009_ch_T0000300;transcript_name=hg002_chrY_paternal_223.1;gene_name=FAM197Y4;ID=intron:HG03009_ch_T0000300:2;Name=FAM197Y4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9230884	9230985	.	-	.	source_transcript=hg002_chrY_paternal_223.1;source_transcript_name=hg002_chrY_paternal_223.1;source_gene=hg002_chrY_paternal_223;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_223;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_223.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_223.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=HG03009_ch_T0000300;gene_id=HG03009_ch_G0000109;Parent=HG03009_ch_T0000300;transcript_name=hg002_chrY_paternal_223.1;gene_name=FAM197Y4;ID=exon:HG03009_ch_T0000300:3;Name=FAM197Y4;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	9233598	9236412	.	+	.	source_gene_common_name=TSPY3;source_gene=hg002_chrY_paternal_186;alternative_source_transcripts=hg002_chrY_paternal_186.3;gene_id=HG03009_ch_G0000110;gene_biotype=protein_coding;gene_name=TSPY3;gene_sources=augTM,transMap;ID=HG03009_ch_G0000110;Name=TSPY3
HG03009_chrY	CAT	transcript	9233598	9236412	1000	+	.	source_transcript=hg002_chrY_paternal_186.3;source_transcript_name=hg002_chrY_paternal_186.4;source_gene=hg002_chrY_paternal_186;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_186;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_186.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_186.3;transcript_score=299.827;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_186.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000301;gene_id=HG03009_ch_G0000110;Parent=HG03009_ch_G0000110;transcript_name=hg002_chrY_paternal_186.4;gene_name=TSPY3;ID=HG03009_ch_T0000301;Name=TSPY3
HG03009_chrY	CAT	exon	9233598	9234147	.	+	.	source_transcript=hg002_chrY_paternal_186.3;source_transcript_name=hg002_chrY_paternal_186.4;source_gene=hg002_chrY_paternal_186;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_186;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_186.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_186.3;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_186.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000301;gene_id=HG03009_ch_G0000110;Parent=HG03009_ch_T0000301;transcript_name=hg002_chrY_paternal_186.4;gene_name=TSPY3;ID=exon:HG03009_ch_T0000301:0;Name=TSPY3;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9233644	9234147	.	+	0	source_transcript=hg002_chrY_paternal_186.3;source_transcript_name=hg002_chrY_paternal_186.4;source_gene=hg002_chrY_paternal_186;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_186;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_186.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_186.3;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_186.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000301;gene_id=HG03009_ch_G0000110;Parent=HG03009_ch_T0000301;transcript_name=hg002_chrY_paternal_186.4;gene_name=TSPY3;ID=CDS:HG03009_ch_T0000301:0;Name=TSPY3;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	9233644	9233646	.	+	0	source_transcript=hg002_chrY_paternal_186.3;source_transcript_name=hg002_chrY_paternal_186.4;source_gene=hg002_chrY_paternal_186;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_186;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_186.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_186.3;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_186.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000301;gene_id=HG03009_ch_G0000110;Parent=HG03009_ch_T0000301;transcript_name=hg002_chrY_paternal_186.4;gene_name=TSPY3;ID=start_codon:HG03009_ch_T0000301;Name=TSPY3;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9234148	9234754	.	+	.	source_transcript=hg002_chrY_paternal_186.3;source_transcript_name=hg002_chrY_paternal_186.4;source_gene=hg002_chrY_paternal_186;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_186;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_186.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_186.3;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_186.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000301;gene_id=HG03009_ch_G0000110;Parent=HG03009_ch_T0000301;transcript_name=hg002_chrY_paternal_186.4;gene_name=TSPY3;ID=intron:HG03009_ch_T0000301:0;Name=TSPY3;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9234755	9234832	.	+	.	source_transcript=hg002_chrY_paternal_186.3;source_transcript_name=hg002_chrY_paternal_186.4;source_gene=hg002_chrY_paternal_186;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_186;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_186.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_186.3;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_186.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000301;gene_id=HG03009_ch_G0000110;Parent=HG03009_ch_T0000301;transcript_name=hg002_chrY_paternal_186.4;gene_name=TSPY3;ID=exon:HG03009_ch_T0000301:1;Name=TSPY3;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9234755	9234832	.	+	0	source_transcript=hg002_chrY_paternal_186.3;source_transcript_name=hg002_chrY_paternal_186.4;source_gene=hg002_chrY_paternal_186;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_186;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_186.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_186.3;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_186.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000301;gene_id=HG03009_ch_G0000110;Parent=HG03009_ch_T0000301;transcript_name=hg002_chrY_paternal_186.4;gene_name=TSPY3;ID=CDS:HG03009_ch_T0000301:1;Name=TSPY3;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9234833	9234960	.	+	.	source_transcript=hg002_chrY_paternal_186.3;source_transcript_name=hg002_chrY_paternal_186.4;source_gene=hg002_chrY_paternal_186;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_186;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_186.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_186.3;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_186.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000301;gene_id=HG03009_ch_G0000110;Parent=HG03009_ch_T0000301;transcript_name=hg002_chrY_paternal_186.4;gene_name=TSPY3;ID=intron:HG03009_ch_T0000301:1;Name=TSPY3;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9234961	9235072	.	+	.	source_transcript=hg002_chrY_paternal_186.3;source_transcript_name=hg002_chrY_paternal_186.4;source_gene=hg002_chrY_paternal_186;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_186;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_186.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_186.3;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_186.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000301;gene_id=HG03009_ch_G0000110;Parent=HG03009_ch_T0000301;transcript_name=hg002_chrY_paternal_186.4;gene_name=TSPY3;ID=exon:HG03009_ch_T0000301:2;Name=TSPY3;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9234961	9235072	.	+	0	source_transcript=hg002_chrY_paternal_186.3;source_transcript_name=hg002_chrY_paternal_186.4;source_gene=hg002_chrY_paternal_186;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_186;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_186.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_186.3;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_186.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000301;gene_id=HG03009_ch_G0000110;Parent=HG03009_ch_T0000301;transcript_name=hg002_chrY_paternal_186.4;gene_name=TSPY3;ID=CDS:HG03009_ch_T0000301:2;Name=TSPY3;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9235073	9235180	.	+	.	source_transcript=hg002_chrY_paternal_186.3;source_transcript_name=hg002_chrY_paternal_186.4;source_gene=hg002_chrY_paternal_186;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_186;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_186.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_186.3;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_186.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000301;gene_id=HG03009_ch_G0000110;Parent=HG03009_ch_T0000301;transcript_name=hg002_chrY_paternal_186.4;gene_name=TSPY3;ID=intron:HG03009_ch_T0000301:2;Name=TSPY3;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9235181	9235319	.	+	.	source_transcript=hg002_chrY_paternal_186.3;source_transcript_name=hg002_chrY_paternal_186.4;source_gene=hg002_chrY_paternal_186;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_186;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_186.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_186.3;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_186.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000301;gene_id=HG03009_ch_G0000110;Parent=HG03009_ch_T0000301;transcript_name=hg002_chrY_paternal_186.4;gene_name=TSPY3;ID=exon:HG03009_ch_T0000301:3;Name=TSPY3;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9235181	9235319	.	+	2	source_transcript=hg002_chrY_paternal_186.3;source_transcript_name=hg002_chrY_paternal_186.4;source_gene=hg002_chrY_paternal_186;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_186;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_186.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_186.3;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_186.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000301;gene_id=HG03009_ch_G0000110;Parent=HG03009_ch_T0000301;transcript_name=hg002_chrY_paternal_186.4;gene_name=TSPY3;ID=CDS:HG03009_ch_T0000301:3;Name=TSPY3;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9235320	9235425	.	+	.	source_transcript=hg002_chrY_paternal_186.3;source_transcript_name=hg002_chrY_paternal_186.4;source_gene=hg002_chrY_paternal_186;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_186;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_186.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_186.3;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_186.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000301;gene_id=HG03009_ch_G0000110;Parent=HG03009_ch_T0000301;transcript_name=hg002_chrY_paternal_186.4;gene_name=TSPY3;ID=intron:HG03009_ch_T0000301:3;Name=TSPY3;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9235426	9235507	.	+	.	source_transcript=hg002_chrY_paternal_186.3;source_transcript_name=hg002_chrY_paternal_186.4;source_gene=hg002_chrY_paternal_186;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_186;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_186.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_186.3;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_186.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000301;gene_id=HG03009_ch_G0000110;Parent=HG03009_ch_T0000301;transcript_name=hg002_chrY_paternal_186.4;gene_name=TSPY3;ID=exon:HG03009_ch_T0000301:4;Name=TSPY3;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9235426	9235477	.	+	1	source_transcript=hg002_chrY_paternal_186.3;source_transcript_name=hg002_chrY_paternal_186.4;source_gene=hg002_chrY_paternal_186;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_186;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_186.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_186.3;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_186.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000301;gene_id=HG03009_ch_G0000110;Parent=HG03009_ch_T0000301;transcript_name=hg002_chrY_paternal_186.4;gene_name=TSPY3;ID=CDS:HG03009_ch_T0000301:4;Name=TSPY3;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	9235475	9235477	.	+	0	source_transcript=hg002_chrY_paternal_186.3;source_transcript_name=hg002_chrY_paternal_186.4;source_gene=hg002_chrY_paternal_186;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_186;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_186.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_186.3;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_186.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000301;gene_id=HG03009_ch_G0000110;Parent=HG03009_ch_T0000301;transcript_name=hg002_chrY_paternal_186.4;gene_name=TSPY3;ID=stop_codon:HG03009_ch_T0000301;Name=TSPY3;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9235508	9236201	.	+	.	source_transcript=hg002_chrY_paternal_186.3;source_transcript_name=hg002_chrY_paternal_186.4;source_gene=hg002_chrY_paternal_186;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_186;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_186.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_186.3;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_186.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000301;gene_id=HG03009_ch_G0000110;Parent=HG03009_ch_T0000301;transcript_name=hg002_chrY_paternal_186.4;gene_name=TSPY3;ID=intron:HG03009_ch_T0000301:4;Name=TSPY3;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9236202	9236412	.	+	.	source_transcript=hg002_chrY_paternal_186.3;source_transcript_name=hg002_chrY_paternal_186.4;source_gene=hg002_chrY_paternal_186;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_186;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_186.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_186.3;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_186.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000301;gene_id=HG03009_ch_G0000110;Parent=HG03009_ch_T0000301;transcript_name=hg002_chrY_paternal_186.4;gene_name=TSPY3;ID=exon:HG03009_ch_T0000301:5;Name=TSPY3;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	9233598	9236412	1000	+	.	source_transcript=hg002_chrY_paternal_186.4;source_transcript_name=hg002_chrY_paternal_186.4;source_gene=hg002_chrY_paternal_186;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_186;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_186.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_186.4;transcript_score=299.828;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_186.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000302;gene_id=HG03009_ch_G0000110;Parent=HG03009_ch_G0000110;transcript_name=hg002_chrY_paternal_186.4;gene_name=TSPY3;ID=HG03009_ch_T0000302;Name=TSPY3
HG03009_chrY	CAT	exon	9233598	9234147	.	+	.	source_transcript=hg002_chrY_paternal_186.4;source_transcript_name=hg002_chrY_paternal_186.4;source_gene=hg002_chrY_paternal_186;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_186;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_186.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_186.4;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_186.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000302;gene_id=HG03009_ch_G0000110;Parent=HG03009_ch_T0000302;transcript_name=hg002_chrY_paternal_186.4;gene_name=TSPY3;ID=exon:HG03009_ch_T0000302:0;Name=TSPY3;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9234148	9234754	.	+	.	source_transcript=hg002_chrY_paternal_186.4;source_transcript_name=hg002_chrY_paternal_186.4;source_gene=hg002_chrY_paternal_186;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_186;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_186.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_186.4;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_186.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000302;gene_id=HG03009_ch_G0000110;Parent=HG03009_ch_T0000302;transcript_name=hg002_chrY_paternal_186.4;gene_name=TSPY3;ID=intron:HG03009_ch_T0000302:0;Name=TSPY3;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9234755	9234832	.	+	.	source_transcript=hg002_chrY_paternal_186.4;source_transcript_name=hg002_chrY_paternal_186.4;source_gene=hg002_chrY_paternal_186;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_186;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_186.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_186.4;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_186.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000302;gene_id=HG03009_ch_G0000110;Parent=HG03009_ch_T0000302;transcript_name=hg002_chrY_paternal_186.4;gene_name=TSPY3;ID=exon:HG03009_ch_T0000302:1;Name=TSPY3;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9234833	9234960	.	+	.	source_transcript=hg002_chrY_paternal_186.4;source_transcript_name=hg002_chrY_paternal_186.4;source_gene=hg002_chrY_paternal_186;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_186;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_186.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_186.4;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_186.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000302;gene_id=HG03009_ch_G0000110;Parent=HG03009_ch_T0000302;transcript_name=hg002_chrY_paternal_186.4;gene_name=TSPY3;ID=intron:HG03009_ch_T0000302:1;Name=TSPY3;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9234961	9235072	.	+	.	source_transcript=hg002_chrY_paternal_186.4;source_transcript_name=hg002_chrY_paternal_186.4;source_gene=hg002_chrY_paternal_186;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_186;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_186.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_186.4;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_186.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000302;gene_id=HG03009_ch_G0000110;Parent=HG03009_ch_T0000302;transcript_name=hg002_chrY_paternal_186.4;gene_name=TSPY3;ID=exon:HG03009_ch_T0000302:2;Name=TSPY3;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9235073	9235180	.	+	.	source_transcript=hg002_chrY_paternal_186.4;source_transcript_name=hg002_chrY_paternal_186.4;source_gene=hg002_chrY_paternal_186;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_186;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_186.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_186.4;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_186.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000302;gene_id=HG03009_ch_G0000110;Parent=HG03009_ch_T0000302;transcript_name=hg002_chrY_paternal_186.4;gene_name=TSPY3;ID=intron:HG03009_ch_T0000302:2;Name=TSPY3;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9235181	9235319	.	+	.	source_transcript=hg002_chrY_paternal_186.4;source_transcript_name=hg002_chrY_paternal_186.4;source_gene=hg002_chrY_paternal_186;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_186;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_186.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_186.4;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_186.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000302;gene_id=HG03009_ch_G0000110;Parent=HG03009_ch_T0000302;transcript_name=hg002_chrY_paternal_186.4;gene_name=TSPY3;ID=exon:HG03009_ch_T0000302:3;Name=TSPY3;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9235320	9235414	.	+	.	source_transcript=hg002_chrY_paternal_186.4;source_transcript_name=hg002_chrY_paternal_186.4;source_gene=hg002_chrY_paternal_186;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_186;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_186.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_186.4;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_186.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000302;gene_id=HG03009_ch_G0000110;Parent=HG03009_ch_T0000302;transcript_name=hg002_chrY_paternal_186.4;gene_name=TSPY3;ID=intron:HG03009_ch_T0000302:3;Name=TSPY3;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9235415	9235507	.	+	.	source_transcript=hg002_chrY_paternal_186.4;source_transcript_name=hg002_chrY_paternal_186.4;source_gene=hg002_chrY_paternal_186;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_186;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_186.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_186.4;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_186.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000302;gene_id=HG03009_ch_G0000110;Parent=HG03009_ch_T0000302;transcript_name=hg002_chrY_paternal_186.4;gene_name=TSPY3;ID=exon:HG03009_ch_T0000302:4;Name=TSPY3;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9235508	9236201	.	+	.	source_transcript=hg002_chrY_paternal_186.4;source_transcript_name=hg002_chrY_paternal_186.4;source_gene=hg002_chrY_paternal_186;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_186;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_186.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_186.4;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_186.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000302;gene_id=HG03009_ch_G0000110;Parent=HG03009_ch_T0000302;transcript_name=hg002_chrY_paternal_186.4;gene_name=TSPY3;ID=intron:HG03009_ch_T0000302:4;Name=TSPY3;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9236202	9236412	.	+	.	source_transcript=hg002_chrY_paternal_186.4;source_transcript_name=hg002_chrY_paternal_186.4;source_gene=hg002_chrY_paternal_186;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_186;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_186.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_186.4;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_186.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000302;gene_id=HG03009_ch_G0000110;Parent=HG03009_ch_T0000302;transcript_name=hg002_chrY_paternal_186.4;gene_name=TSPY3;ID=exon:HG03009_ch_T0000302:5;Name=TSPY3;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	9245681	9251372	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_227;gene_id=HG03009_ch_G0000111;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=HG03009_ch_G0000111;Name=FAM197Y2
HG03009_chrY	CAT	transcript	9245681	9251372	1000	-	.	source_transcript=hg002_chrY_paternal_227.1;source_transcript_name=hg002_chrY_paternal_227.1;source_gene=hg002_chrY_paternal_227;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_227;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_227.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_227.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG03009_ch_T0000303;gene_id=HG03009_ch_G0000111;Parent=HG03009_ch_G0000111;transcript_name=hg002_chrY_paternal_227.1;gene_name=FAM197Y2;ID=HG03009_ch_T0000303;Name=FAM197Y2
HG03009_chrY	CAT	exon	9245681	9245740	.	-	.	source_transcript=hg002_chrY_paternal_227.1;source_transcript_name=hg002_chrY_paternal_227.1;source_gene=hg002_chrY_paternal_227;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_227;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_227.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_227.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG03009_ch_T0000303;gene_id=HG03009_ch_G0000111;Parent=HG03009_ch_T0000303;transcript_name=hg002_chrY_paternal_227.1;gene_name=FAM197Y2;ID=exon:HG03009_ch_T0000303:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9245741	9249290	.	-	.	source_transcript=hg002_chrY_paternal_227.1;source_transcript_name=hg002_chrY_paternal_227.1;source_gene=hg002_chrY_paternal_227;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_227;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_227.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_227.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG03009_ch_T0000303;gene_id=HG03009_ch_G0000111;Parent=HG03009_ch_T0000303;transcript_name=hg002_chrY_paternal_227.1;gene_name=FAM197Y2;ID=intron:HG03009_ch_T0000303:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9249291	9249449	.	-	.	source_transcript=hg002_chrY_paternal_227.1;source_transcript_name=hg002_chrY_paternal_227.1;source_gene=hg002_chrY_paternal_227;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_227;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_227.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_227.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG03009_ch_T0000303;gene_id=HG03009_ch_G0000111;Parent=HG03009_ch_T0000303;transcript_name=hg002_chrY_paternal_227.1;gene_name=FAM197Y2;ID=exon:HG03009_ch_T0000303:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9249450	9250949	.	-	.	source_transcript=hg002_chrY_paternal_227.1;source_transcript_name=hg002_chrY_paternal_227.1;source_gene=hg002_chrY_paternal_227;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_227;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_227.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_227.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG03009_ch_T0000303;gene_id=HG03009_ch_G0000111;Parent=HG03009_ch_T0000303;transcript_name=hg002_chrY_paternal_227.1;gene_name=FAM197Y2;ID=intron:HG03009_ch_T0000303:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9250950	9251095	.	-	.	source_transcript=hg002_chrY_paternal_227.1;source_transcript_name=hg002_chrY_paternal_227.1;source_gene=hg002_chrY_paternal_227;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_227;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_227.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_227.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG03009_ch_T0000303;gene_id=HG03009_ch_G0000111;Parent=HG03009_ch_T0000303;transcript_name=hg002_chrY_paternal_227.1;gene_name=FAM197Y2;ID=exon:HG03009_ch_T0000303:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9251096	9251181	.	-	.	source_transcript=hg002_chrY_paternal_227.1;source_transcript_name=hg002_chrY_paternal_227.1;source_gene=hg002_chrY_paternal_227;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_227;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_227.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_227.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG03009_ch_T0000303;gene_id=HG03009_ch_G0000111;Parent=HG03009_ch_T0000303;transcript_name=hg002_chrY_paternal_227.1;gene_name=FAM197Y2;ID=intron:HG03009_ch_T0000303:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9251182	9251372	.	-	.	source_transcript=hg002_chrY_paternal_227.1;source_transcript_name=hg002_chrY_paternal_227.1;source_gene=hg002_chrY_paternal_227;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_227;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_227.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_227.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG03009_ch_T0000303;gene_id=HG03009_ch_G0000111;Parent=HG03009_ch_T0000303;transcript_name=hg002_chrY_paternal_227.1;gene_name=FAM197Y2;ID=exon:HG03009_ch_T0000303:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	9253896	9256710	.	+	.	source_gene_common_name=TSPY4;source_gene=hg002_chrY_paternal_184;alternative_source_transcripts=hg002_chrY_paternal_188.1,hg002_chrY_paternal_188.1;gene_id=HG03009_ch_G0000112;gene_biotype=protein_coding;gene_name=TSPY4;gene_sources=liftoff,augTM;ID=HG03009_ch_G0000112;Name=TSPY4
HG03009_chrY	CAT	transcript	9253896	9256710	100	+	.	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_188.1,hg002_chrY_paternal_188.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000304;gene_id=HG03009_ch_G0000112;Parent=HG03009_ch_G0000112;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=HG03009_ch_T0000304;Name=TSPY4
HG03009_chrY	CAT	exon	9253896	9254445	.	+	.	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_188.1,hg002_chrY_paternal_188.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000304;gene_id=HG03009_ch_G0000112;Parent=HG03009_ch_T0000304;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000304:0;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9253942	9254445	.	+	0	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_188.1,hg002_chrY_paternal_188.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000304;gene_id=HG03009_ch_G0000112;Parent=HG03009_ch_T0000304;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:HG03009_ch_T0000304:0;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	9253942	9253944	.	+	0	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_188.1,hg002_chrY_paternal_188.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000304;gene_id=HG03009_ch_G0000112;Parent=HG03009_ch_T0000304;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=start_codon:HG03009_ch_T0000304;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9254446	9255052	.	+	.	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_188.1,hg002_chrY_paternal_188.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000304;gene_id=HG03009_ch_G0000112;Parent=HG03009_ch_T0000304;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=intron:HG03009_ch_T0000304:0;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9255053	9255130	.	+	.	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_188.1,hg002_chrY_paternal_188.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000304;gene_id=HG03009_ch_G0000112;Parent=HG03009_ch_T0000304;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000304:1;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9255053	9255130	.	+	0	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_188.1,hg002_chrY_paternal_188.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000304;gene_id=HG03009_ch_G0000112;Parent=HG03009_ch_T0000304;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:HG03009_ch_T0000304:1;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9255131	9255258	.	+	.	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_188.1,hg002_chrY_paternal_188.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000304;gene_id=HG03009_ch_G0000112;Parent=HG03009_ch_T0000304;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=intron:HG03009_ch_T0000304:1;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9255259	9255370	.	+	.	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_188.1,hg002_chrY_paternal_188.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000304;gene_id=HG03009_ch_G0000112;Parent=HG03009_ch_T0000304;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000304:2;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9255259	9255370	.	+	0	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_188.1,hg002_chrY_paternal_188.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000304;gene_id=HG03009_ch_G0000112;Parent=HG03009_ch_T0000304;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:HG03009_ch_T0000304:2;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9255371	9255471	.	+	.	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_188.1,hg002_chrY_paternal_188.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000304;gene_id=HG03009_ch_G0000112;Parent=HG03009_ch_T0000304;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=intron:HG03009_ch_T0000304:2;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9255472	9255617	.	+	.	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_188.1,hg002_chrY_paternal_188.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000304;gene_id=HG03009_ch_G0000112;Parent=HG03009_ch_T0000304;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000304:3;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9255472	9255617	.	+	2	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_188.1,hg002_chrY_paternal_188.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000304;gene_id=HG03009_ch_G0000112;Parent=HG03009_ch_T0000304;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:HG03009_ch_T0000304:3;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9255618	9255723	.	+	.	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_188.1,hg002_chrY_paternal_188.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000304;gene_id=HG03009_ch_G0000112;Parent=HG03009_ch_T0000304;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=intron:HG03009_ch_T0000304:3;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9255724	9255805	.	+	.	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_188.1,hg002_chrY_paternal_188.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000304;gene_id=HG03009_ch_G0000112;Parent=HG03009_ch_T0000304;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000304:4;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9255724	9255805	.	+	0	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_188.1,hg002_chrY_paternal_188.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000304;gene_id=HG03009_ch_G0000112;Parent=HG03009_ch_T0000304;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:HG03009_ch_T0000304:4;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9255806	9256499	.	+	.	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_188.1,hg002_chrY_paternal_188.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000304;gene_id=HG03009_ch_G0000112;Parent=HG03009_ch_T0000304;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=intron:HG03009_ch_T0000304:4;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9256500	9256710	.	+	.	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_188.1,hg002_chrY_paternal_188.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000304;gene_id=HG03009_ch_G0000112;Parent=HG03009_ch_T0000304;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000304:5;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9256500	9256522	.	+	2	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_188.1,hg002_chrY_paternal_188.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000304;gene_id=HG03009_ch_G0000112;Parent=HG03009_ch_T0000304;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:HG03009_ch_T0000304:5;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	9256520	9256522	.	+	0	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_188.1,hg002_chrY_paternal_188.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000304;gene_id=HG03009_ch_G0000112;Parent=HG03009_ch_T0000304;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=stop_codon:HG03009_ch_T0000304;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	9253896	9256710	100	+	.	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_188.2,hg002_chrY_paternal_188.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000305;gene_id=HG03009_ch_G0000112;Parent=HG03009_ch_G0000112;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=HG03009_ch_T0000305;Name=TSPY4
HG03009_chrY	CAT	exon	9253896	9254445	.	+	.	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_188.2,hg002_chrY_paternal_188.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000305;gene_id=HG03009_ch_G0000112;Parent=HG03009_ch_T0000305;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000305:0;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9253942	9254445	.	+	0	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_188.2,hg002_chrY_paternal_188.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000305;gene_id=HG03009_ch_G0000112;Parent=HG03009_ch_T0000305;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:HG03009_ch_T0000305:0;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	9253942	9253944	.	+	0	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_188.2,hg002_chrY_paternal_188.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000305;gene_id=HG03009_ch_G0000112;Parent=HG03009_ch_T0000305;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=start_codon:HG03009_ch_T0000305;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9254446	9255052	.	+	.	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_188.2,hg002_chrY_paternal_188.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000305;gene_id=HG03009_ch_G0000112;Parent=HG03009_ch_T0000305;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=intron:HG03009_ch_T0000305:0;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9255053	9255130	.	+	.	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_188.2,hg002_chrY_paternal_188.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000305;gene_id=HG03009_ch_G0000112;Parent=HG03009_ch_T0000305;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000305:1;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9255053	9255130	.	+	0	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_188.2,hg002_chrY_paternal_188.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000305;gene_id=HG03009_ch_G0000112;Parent=HG03009_ch_T0000305;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:HG03009_ch_T0000305:1;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9255131	9255258	.	+	.	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_188.2,hg002_chrY_paternal_188.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000305;gene_id=HG03009_ch_G0000112;Parent=HG03009_ch_T0000305;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=intron:HG03009_ch_T0000305:1;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9255259	9255370	.	+	.	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_188.2,hg002_chrY_paternal_188.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000305;gene_id=HG03009_ch_G0000112;Parent=HG03009_ch_T0000305;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000305:2;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9255259	9255370	.	+	0	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_188.2,hg002_chrY_paternal_188.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000305;gene_id=HG03009_ch_G0000112;Parent=HG03009_ch_T0000305;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:HG03009_ch_T0000305:2;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9255371	9255471	.	+	.	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_188.2,hg002_chrY_paternal_188.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000305;gene_id=HG03009_ch_G0000112;Parent=HG03009_ch_T0000305;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=intron:HG03009_ch_T0000305:2;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9255472	9255617	.	+	.	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_188.2,hg002_chrY_paternal_188.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000305;gene_id=HG03009_ch_G0000112;Parent=HG03009_ch_T0000305;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000305:3;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9255472	9255617	.	+	2	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_188.2,hg002_chrY_paternal_188.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000305;gene_id=HG03009_ch_G0000112;Parent=HG03009_ch_T0000305;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:HG03009_ch_T0000305:3;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9255618	9255712	.	+	.	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_188.2,hg002_chrY_paternal_188.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000305;gene_id=HG03009_ch_G0000112;Parent=HG03009_ch_T0000305;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=intron:HG03009_ch_T0000305:3;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9255713	9255805	.	+	.	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_188.2,hg002_chrY_paternal_188.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000305;gene_id=HG03009_ch_G0000112;Parent=HG03009_ch_T0000305;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000305:4;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9255713	9255775	.	+	0	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_188.2,hg002_chrY_paternal_188.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000305;gene_id=HG03009_ch_G0000112;Parent=HG03009_ch_T0000305;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:HG03009_ch_T0000305:4;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	9255773	9255775	.	+	0	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_188.2,hg002_chrY_paternal_188.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000305;gene_id=HG03009_ch_G0000112;Parent=HG03009_ch_T0000305;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=stop_codon:HG03009_ch_T0000305;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9255806	9256499	.	+	.	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_188.2,hg002_chrY_paternal_188.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000305;gene_id=HG03009_ch_G0000112;Parent=HG03009_ch_T0000305;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=intron:HG03009_ch_T0000305:4;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9256500	9256710	.	+	.	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_188.2,hg002_chrY_paternal_188.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000305;gene_id=HG03009_ch_G0000112;Parent=HG03009_ch_T0000305;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000305:5;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	9253896	9256710	100	+	.	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_188.3,hg002_chrY_paternal_188.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000306;gene_id=HG03009_ch_G0000112;Parent=HG03009_ch_G0000112;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=HG03009_ch_T0000306;Name=TSPY4
HG03009_chrY	CAT	exon	9253896	9254445	.	+	.	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_188.3,hg002_chrY_paternal_188.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000306;gene_id=HG03009_ch_G0000112;Parent=HG03009_ch_T0000306;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000306:0;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9253942	9254445	.	+	0	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_188.3,hg002_chrY_paternal_188.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000306;gene_id=HG03009_ch_G0000112;Parent=HG03009_ch_T0000306;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:HG03009_ch_T0000306:0;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	9253942	9253944	.	+	0	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_188.3,hg002_chrY_paternal_188.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000306;gene_id=HG03009_ch_G0000112;Parent=HG03009_ch_T0000306;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=start_codon:HG03009_ch_T0000306;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9254446	9255052	.	+	.	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_188.3,hg002_chrY_paternal_188.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000306;gene_id=HG03009_ch_G0000112;Parent=HG03009_ch_T0000306;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=intron:HG03009_ch_T0000306:0;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9255053	9255130	.	+	.	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_188.3,hg002_chrY_paternal_188.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000306;gene_id=HG03009_ch_G0000112;Parent=HG03009_ch_T0000306;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000306:1;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9255053	9255130	.	+	0	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_188.3,hg002_chrY_paternal_188.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000306;gene_id=HG03009_ch_G0000112;Parent=HG03009_ch_T0000306;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:HG03009_ch_T0000306:1;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9255131	9255258	.	+	.	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_188.3,hg002_chrY_paternal_188.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000306;gene_id=HG03009_ch_G0000112;Parent=HG03009_ch_T0000306;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=intron:HG03009_ch_T0000306:1;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9255259	9255370	.	+	.	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_188.3,hg002_chrY_paternal_188.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000306;gene_id=HG03009_ch_G0000112;Parent=HG03009_ch_T0000306;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000306:2;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9255259	9255370	.	+	0	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_188.3,hg002_chrY_paternal_188.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000306;gene_id=HG03009_ch_G0000112;Parent=HG03009_ch_T0000306;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:HG03009_ch_T0000306:2;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9255371	9255478	.	+	.	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_188.3,hg002_chrY_paternal_188.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000306;gene_id=HG03009_ch_G0000112;Parent=HG03009_ch_T0000306;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=intron:HG03009_ch_T0000306:2;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9255479	9255617	.	+	.	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_188.3,hg002_chrY_paternal_188.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000306;gene_id=HG03009_ch_G0000112;Parent=HG03009_ch_T0000306;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000306:3;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9255479	9255617	.	+	2	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_188.3,hg002_chrY_paternal_188.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000306;gene_id=HG03009_ch_G0000112;Parent=HG03009_ch_T0000306;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:HG03009_ch_T0000306:3;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9255618	9255723	.	+	.	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_188.3,hg002_chrY_paternal_188.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000306;gene_id=HG03009_ch_G0000112;Parent=HG03009_ch_T0000306;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=intron:HG03009_ch_T0000306:3;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9255724	9255805	.	+	.	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_188.3,hg002_chrY_paternal_188.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000306;gene_id=HG03009_ch_G0000112;Parent=HG03009_ch_T0000306;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000306:4;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9255724	9255775	.	+	1	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_188.3,hg002_chrY_paternal_188.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000306;gene_id=HG03009_ch_G0000112;Parent=HG03009_ch_T0000306;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:HG03009_ch_T0000306:4;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	9255773	9255775	.	+	0	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_188.3,hg002_chrY_paternal_188.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000306;gene_id=HG03009_ch_G0000112;Parent=HG03009_ch_T0000306;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=stop_codon:HG03009_ch_T0000306;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9255806	9256499	.	+	.	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_188.3,hg002_chrY_paternal_188.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000306;gene_id=HG03009_ch_G0000112;Parent=HG03009_ch_T0000306;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=intron:HG03009_ch_T0000306:4;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9256500	9256710	.	+	.	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_188.3,hg002_chrY_paternal_188.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000306;gene_id=HG03009_ch_G0000112;Parent=HG03009_ch_T0000306;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000306:5;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	9253896	9256710	1000	+	.	source_transcript=hg002_chrY_paternal_184.4;source_transcript_name=hg002_chrY_paternal_184.1;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_184.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_188.4,hg002_chrY_paternal_188.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000307;gene_id=HG03009_ch_G0000112;Parent=HG03009_ch_G0000112;transcript_name=hg002_chrY_paternal_184.1;gene_name=TSPY4;ID=HG03009_ch_T0000307;Name=TSPY4
HG03009_chrY	CAT	exon	9253896	9254445	.	+	.	source_transcript=hg002_chrY_paternal_184.4;source_transcript_name=hg002_chrY_paternal_184.1;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_184.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_188.4,hg002_chrY_paternal_188.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000307;gene_id=HG03009_ch_G0000112;Parent=HG03009_ch_T0000307;transcript_name=hg002_chrY_paternal_184.1;gene_name=TSPY4;ID=exon:HG03009_ch_T0000307:0;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9254446	9255052	.	+	.	source_transcript=hg002_chrY_paternal_184.4;source_transcript_name=hg002_chrY_paternal_184.1;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_184.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_188.4,hg002_chrY_paternal_188.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000307;gene_id=HG03009_ch_G0000112;Parent=HG03009_ch_T0000307;transcript_name=hg002_chrY_paternal_184.1;gene_name=TSPY4;ID=intron:HG03009_ch_T0000307:0;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9255053	9255130	.	+	.	source_transcript=hg002_chrY_paternal_184.4;source_transcript_name=hg002_chrY_paternal_184.1;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_184.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_188.4,hg002_chrY_paternal_188.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000307;gene_id=HG03009_ch_G0000112;Parent=HG03009_ch_T0000307;transcript_name=hg002_chrY_paternal_184.1;gene_name=TSPY4;ID=exon:HG03009_ch_T0000307:1;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9255131	9255258	.	+	.	source_transcript=hg002_chrY_paternal_184.4;source_transcript_name=hg002_chrY_paternal_184.1;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_184.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_188.4,hg002_chrY_paternal_188.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000307;gene_id=HG03009_ch_G0000112;Parent=HG03009_ch_T0000307;transcript_name=hg002_chrY_paternal_184.1;gene_name=TSPY4;ID=intron:HG03009_ch_T0000307:1;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9255259	9255370	.	+	.	source_transcript=hg002_chrY_paternal_184.4;source_transcript_name=hg002_chrY_paternal_184.1;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_184.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_188.4,hg002_chrY_paternal_188.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000307;gene_id=HG03009_ch_G0000112;Parent=HG03009_ch_T0000307;transcript_name=hg002_chrY_paternal_184.1;gene_name=TSPY4;ID=exon:HG03009_ch_T0000307:2;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9255371	9255478	.	+	.	source_transcript=hg002_chrY_paternal_184.4;source_transcript_name=hg002_chrY_paternal_184.1;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_184.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_188.4,hg002_chrY_paternal_188.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000307;gene_id=HG03009_ch_G0000112;Parent=HG03009_ch_T0000307;transcript_name=hg002_chrY_paternal_184.1;gene_name=TSPY4;ID=intron:HG03009_ch_T0000307:2;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9255479	9255617	.	+	.	source_transcript=hg002_chrY_paternal_184.4;source_transcript_name=hg002_chrY_paternal_184.1;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_184.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_188.4,hg002_chrY_paternal_188.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000307;gene_id=HG03009_ch_G0000112;Parent=HG03009_ch_T0000307;transcript_name=hg002_chrY_paternal_184.1;gene_name=TSPY4;ID=exon:HG03009_ch_T0000307:3;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9255618	9255712	.	+	.	source_transcript=hg002_chrY_paternal_184.4;source_transcript_name=hg002_chrY_paternal_184.1;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_184.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_188.4,hg002_chrY_paternal_188.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000307;gene_id=HG03009_ch_G0000112;Parent=HG03009_ch_T0000307;transcript_name=hg002_chrY_paternal_184.1;gene_name=TSPY4;ID=intron:HG03009_ch_T0000307:3;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9255713	9255805	.	+	.	source_transcript=hg002_chrY_paternal_184.4;source_transcript_name=hg002_chrY_paternal_184.1;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_184.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_188.4,hg002_chrY_paternal_188.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000307;gene_id=HG03009_ch_G0000112;Parent=HG03009_ch_T0000307;transcript_name=hg002_chrY_paternal_184.1;gene_name=TSPY4;ID=exon:HG03009_ch_T0000307:4;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9255806	9256499	.	+	.	source_transcript=hg002_chrY_paternal_184.4;source_transcript_name=hg002_chrY_paternal_184.1;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_184.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_188.4,hg002_chrY_paternal_188.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000307;gene_id=HG03009_ch_G0000112;Parent=HG03009_ch_T0000307;transcript_name=hg002_chrY_paternal_184.1;gene_name=TSPY4;ID=intron:HG03009_ch_T0000307:4;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9256500	9256710	.	+	.	source_transcript=hg002_chrY_paternal_184.4;source_transcript_name=hg002_chrY_paternal_184.1;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_184.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_188.4,hg002_chrY_paternal_188.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000307;gene_id=HG03009_ch_G0000112;Parent=HG03009_ch_T0000307;transcript_name=hg002_chrY_paternal_184.1;gene_name=TSPY4;ID=exon:HG03009_ch_T0000307:5;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	9265979	9271586	.	-	.	source_gene_common_name=FAM197Y3;source_gene=hg002_chrY_paternal_225;alternative_source_transcripts=hg002_chrY_paternal_189.1,hg002_chrY_paternal_189.1;gene_id=HG03009_ch_G0000113;gene_biotype=lncRNA;gene_name=FAM197Y3;gene_sources=liftoff;ID=HG03009_ch_G0000113;Name=FAM197Y3
HG03009_chrY	CAT	transcript	9265979	9271586	1000	-	.	source_transcript=hg002_chrY_paternal_225.1;source_transcript_name=hg002_chrY_paternal_225.1;source_gene=hg002_chrY_paternal_225;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_225;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_225.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_225.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_189.1,hg002_chrY_paternal_189.1;transcript_id=HG03009_ch_T0000308;gene_id=HG03009_ch_G0000113;Parent=HG03009_ch_G0000113;transcript_name=hg002_chrY_paternal_225.1;gene_name=FAM197Y3;ID=HG03009_ch_T0000308;Name=FAM197Y3
HG03009_chrY	CAT	exon	9265979	9266038	.	-	.	source_transcript=hg002_chrY_paternal_225.1;source_transcript_name=hg002_chrY_paternal_225.1;source_gene=hg002_chrY_paternal_225;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_225;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_225.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_225.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_189.1,hg002_chrY_paternal_189.1;transcript_id=HG03009_ch_T0000308;gene_id=HG03009_ch_G0000113;Parent=HG03009_ch_T0000308;transcript_name=hg002_chrY_paternal_225.1;gene_name=FAM197Y3;ID=exon:HG03009_ch_T0000308:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9266039	9269589	.	-	.	source_transcript=hg002_chrY_paternal_225.1;source_transcript_name=hg002_chrY_paternal_225.1;source_gene=hg002_chrY_paternal_225;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_225;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_225.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_225.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_189.1,hg002_chrY_paternal_189.1;transcript_id=HG03009_ch_T0000308;gene_id=HG03009_ch_G0000113;Parent=HG03009_ch_T0000308;transcript_name=hg002_chrY_paternal_225.1;gene_name=FAM197Y3;ID=intron:HG03009_ch_T0000308:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9269590	9269748	.	-	.	source_transcript=hg002_chrY_paternal_225.1;source_transcript_name=hg002_chrY_paternal_225.1;source_gene=hg002_chrY_paternal_225;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_225;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_225.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_225.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_189.1,hg002_chrY_paternal_189.1;transcript_id=HG03009_ch_T0000308;gene_id=HG03009_ch_G0000113;Parent=HG03009_ch_T0000308;transcript_name=hg002_chrY_paternal_225.1;gene_name=FAM197Y3;ID=exon:HG03009_ch_T0000308:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9269749	9271252	.	-	.	source_transcript=hg002_chrY_paternal_225.1;source_transcript_name=hg002_chrY_paternal_225.1;source_gene=hg002_chrY_paternal_225;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_225;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_225.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_225.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_189.1,hg002_chrY_paternal_189.1;transcript_id=HG03009_ch_T0000308;gene_id=HG03009_ch_G0000113;Parent=HG03009_ch_T0000308;transcript_name=hg002_chrY_paternal_225.1;gene_name=FAM197Y3;ID=intron:HG03009_ch_T0000308:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9271253	9271398	.	-	.	source_transcript=hg002_chrY_paternal_225.1;source_transcript_name=hg002_chrY_paternal_225.1;source_gene=hg002_chrY_paternal_225;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_225;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_225.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_225.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_189.1,hg002_chrY_paternal_189.1;transcript_id=HG03009_ch_T0000308;gene_id=HG03009_ch_G0000113;Parent=HG03009_ch_T0000308;transcript_name=hg002_chrY_paternal_225.1;gene_name=FAM197Y3;ID=exon:HG03009_ch_T0000308:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9271399	9271484	.	-	.	source_transcript=hg002_chrY_paternal_225.1;source_transcript_name=hg002_chrY_paternal_225.1;source_gene=hg002_chrY_paternal_225;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_225;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_225.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_225.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_189.1,hg002_chrY_paternal_189.1;transcript_id=HG03009_ch_T0000308;gene_id=HG03009_ch_G0000113;Parent=HG03009_ch_T0000308;transcript_name=hg002_chrY_paternal_225.1;gene_name=FAM197Y3;ID=intron:HG03009_ch_T0000308:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9271485	9271586	.	-	.	source_transcript=hg002_chrY_paternal_225.1;source_transcript_name=hg002_chrY_paternal_225.1;source_gene=hg002_chrY_paternal_225;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_225;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_225.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_225.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_189.1,hg002_chrY_paternal_189.1;transcript_id=HG03009_ch_T0000308;gene_id=HG03009_ch_G0000113;Parent=HG03009_ch_T0000308;transcript_name=hg002_chrY_paternal_225.1;gene_name=FAM197Y3;ID=exon:HG03009_ch_T0000308:3;Name=FAM197Y3;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	9274199	9276995	.	+	.	source_gene_common_name=TSPY10;source_gene=hg002_chrY_paternal_172;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_190.1;gene_id=HG03009_ch_G0000114;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff;ID=HG03009_ch_G0000114;Name=TSPY10
HG03009_chrY	CAT	transcript	9274199	9276995	100	+	.	source_transcript=hg002_chrY_paternal_172.1;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_190.1;transcript_id=HG03009_ch_T0000309;gene_id=HG03009_ch_G0000114;Parent=HG03009_ch_G0000114;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=HG03009_ch_T0000309;Name=TSPY10
HG03009_chrY	CAT	exon	9274199	9274730	.	+	.	source_transcript=hg002_chrY_paternal_172.1;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_190.1;transcript_id=HG03009_ch_T0000309;gene_id=HG03009_ch_G0000114;Parent=HG03009_ch_T0000309;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000309:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9274245	9274730	.	+	0	source_transcript=hg002_chrY_paternal_172.1;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_190.1;transcript_id=HG03009_ch_T0000309;gene_id=HG03009_ch_G0000114;Parent=HG03009_ch_T0000309;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000309:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	9274245	9274247	.	+	0	source_transcript=hg002_chrY_paternal_172.1;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_190.1;transcript_id=HG03009_ch_T0000309;gene_id=HG03009_ch_G0000114;Parent=HG03009_ch_T0000309;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=start_codon:HG03009_ch_T0000309;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9274731	9275337	.	+	.	source_transcript=hg002_chrY_paternal_172.1;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_190.1;transcript_id=HG03009_ch_T0000309;gene_id=HG03009_ch_G0000114;Parent=HG03009_ch_T0000309;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000309:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9275338	9275415	.	+	.	source_transcript=hg002_chrY_paternal_172.1;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_190.1;transcript_id=HG03009_ch_T0000309;gene_id=HG03009_ch_G0000114;Parent=HG03009_ch_T0000309;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000309:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9275338	9275415	.	+	0	source_transcript=hg002_chrY_paternal_172.1;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_190.1;transcript_id=HG03009_ch_T0000309;gene_id=HG03009_ch_G0000114;Parent=HG03009_ch_T0000309;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000309:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9275416	9275543	.	+	.	source_transcript=hg002_chrY_paternal_172.1;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_190.1;transcript_id=HG03009_ch_T0000309;gene_id=HG03009_ch_G0000114;Parent=HG03009_ch_T0000309;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000309:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9275544	9275655	.	+	.	source_transcript=hg002_chrY_paternal_172.1;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_190.1;transcript_id=HG03009_ch_T0000309;gene_id=HG03009_ch_G0000114;Parent=HG03009_ch_T0000309;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000309:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9275544	9275655	.	+	0	source_transcript=hg002_chrY_paternal_172.1;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_190.1;transcript_id=HG03009_ch_T0000309;gene_id=HG03009_ch_G0000114;Parent=HG03009_ch_T0000309;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000309:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9275656	9275756	.	+	.	source_transcript=hg002_chrY_paternal_172.1;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_190.1;transcript_id=HG03009_ch_T0000309;gene_id=HG03009_ch_G0000114;Parent=HG03009_ch_T0000309;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000309:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9275757	9275902	.	+	.	source_transcript=hg002_chrY_paternal_172.1;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_190.1;transcript_id=HG03009_ch_T0000309;gene_id=HG03009_ch_G0000114;Parent=HG03009_ch_T0000309;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000309:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9275757	9275902	.	+	2	source_transcript=hg002_chrY_paternal_172.1;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_190.1;transcript_id=HG03009_ch_T0000309;gene_id=HG03009_ch_G0000114;Parent=HG03009_ch_T0000309;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000309:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9275903	9276008	.	+	.	source_transcript=hg002_chrY_paternal_172.1;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_190.1;transcript_id=HG03009_ch_T0000309;gene_id=HG03009_ch_G0000114;Parent=HG03009_ch_T0000309;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000309:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9276009	9276090	.	+	.	source_transcript=hg002_chrY_paternal_172.1;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_190.1;transcript_id=HG03009_ch_T0000309;gene_id=HG03009_ch_G0000114;Parent=HG03009_ch_T0000309;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000309:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9276009	9276090	.	+	0	source_transcript=hg002_chrY_paternal_172.1;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_190.1;transcript_id=HG03009_ch_T0000309;gene_id=HG03009_ch_G0000114;Parent=HG03009_ch_T0000309;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000309:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9276091	9276784	.	+	.	source_transcript=hg002_chrY_paternal_172.1;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_190.1;transcript_id=HG03009_ch_T0000309;gene_id=HG03009_ch_G0000114;Parent=HG03009_ch_T0000309;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000309:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9276785	9276995	.	+	.	source_transcript=hg002_chrY_paternal_172.1;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_190.1;transcript_id=HG03009_ch_T0000309;gene_id=HG03009_ch_G0000114;Parent=HG03009_ch_T0000309;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000309:5;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9276785	9276807	.	+	2	source_transcript=hg002_chrY_paternal_172.1;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_190.1;transcript_id=HG03009_ch_T0000309;gene_id=HG03009_ch_G0000114;Parent=HG03009_ch_T0000309;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000309:5;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	9276805	9276807	.	+	0	source_transcript=hg002_chrY_paternal_172.1;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_190.1;transcript_id=HG03009_ch_T0000309;gene_id=HG03009_ch_G0000114;Parent=HG03009_ch_T0000309;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=stop_codon:HG03009_ch_T0000309;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	9274199	9276995	100	+	.	source_transcript=hg002_chrY_paternal_172.2;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_190.2;transcript_id=HG03009_ch_T0000310;gene_id=HG03009_ch_G0000114;Parent=HG03009_ch_G0000114;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=HG03009_ch_T0000310;Name=TSPY10
HG03009_chrY	CAT	exon	9274199	9274730	.	+	.	source_transcript=hg002_chrY_paternal_172.2;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_190.2;transcript_id=HG03009_ch_T0000310;gene_id=HG03009_ch_G0000114;Parent=HG03009_ch_T0000310;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000310:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9274245	9274730	.	+	0	source_transcript=hg002_chrY_paternal_172.2;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_190.2;transcript_id=HG03009_ch_T0000310;gene_id=HG03009_ch_G0000114;Parent=HG03009_ch_T0000310;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000310:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	9274245	9274247	.	+	0	source_transcript=hg002_chrY_paternal_172.2;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_190.2;transcript_id=HG03009_ch_T0000310;gene_id=HG03009_ch_G0000114;Parent=HG03009_ch_T0000310;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=start_codon:HG03009_ch_T0000310;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9274731	9275337	.	+	.	source_transcript=hg002_chrY_paternal_172.2;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_190.2;transcript_id=HG03009_ch_T0000310;gene_id=HG03009_ch_G0000114;Parent=HG03009_ch_T0000310;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000310:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9275338	9275415	.	+	.	source_transcript=hg002_chrY_paternal_172.2;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_190.2;transcript_id=HG03009_ch_T0000310;gene_id=HG03009_ch_G0000114;Parent=HG03009_ch_T0000310;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000310:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9275338	9275415	.	+	0	source_transcript=hg002_chrY_paternal_172.2;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_190.2;transcript_id=HG03009_ch_T0000310;gene_id=HG03009_ch_G0000114;Parent=HG03009_ch_T0000310;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000310:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9275416	9275543	.	+	.	source_transcript=hg002_chrY_paternal_172.2;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_190.2;transcript_id=HG03009_ch_T0000310;gene_id=HG03009_ch_G0000114;Parent=HG03009_ch_T0000310;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000310:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9275544	9275655	.	+	.	source_transcript=hg002_chrY_paternal_172.2;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_190.2;transcript_id=HG03009_ch_T0000310;gene_id=HG03009_ch_G0000114;Parent=HG03009_ch_T0000310;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000310:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9275544	9275655	.	+	0	source_transcript=hg002_chrY_paternal_172.2;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_190.2;transcript_id=HG03009_ch_T0000310;gene_id=HG03009_ch_G0000114;Parent=HG03009_ch_T0000310;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000310:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9275656	9275756	.	+	.	source_transcript=hg002_chrY_paternal_172.2;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_190.2;transcript_id=HG03009_ch_T0000310;gene_id=HG03009_ch_G0000114;Parent=HG03009_ch_T0000310;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000310:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9275757	9275902	.	+	.	source_transcript=hg002_chrY_paternal_172.2;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_190.2;transcript_id=HG03009_ch_T0000310;gene_id=HG03009_ch_G0000114;Parent=HG03009_ch_T0000310;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000310:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9275757	9275902	.	+	2	source_transcript=hg002_chrY_paternal_172.2;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_190.2;transcript_id=HG03009_ch_T0000310;gene_id=HG03009_ch_G0000114;Parent=HG03009_ch_T0000310;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000310:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9275903	9275997	.	+	.	source_transcript=hg002_chrY_paternal_172.2;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_190.2;transcript_id=HG03009_ch_T0000310;gene_id=HG03009_ch_G0000114;Parent=HG03009_ch_T0000310;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000310:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9275998	9276090	.	+	.	source_transcript=hg002_chrY_paternal_172.2;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_190.2;transcript_id=HG03009_ch_T0000310;gene_id=HG03009_ch_G0000114;Parent=HG03009_ch_T0000310;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000310:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9275998	9276060	.	+	0	source_transcript=hg002_chrY_paternal_172.2;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_190.2;transcript_id=HG03009_ch_T0000310;gene_id=HG03009_ch_G0000114;Parent=HG03009_ch_T0000310;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000310:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	9276058	9276060	.	+	0	source_transcript=hg002_chrY_paternal_172.2;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_190.2;transcript_id=HG03009_ch_T0000310;gene_id=HG03009_ch_G0000114;Parent=HG03009_ch_T0000310;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=stop_codon:HG03009_ch_T0000310;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9276091	9276784	.	+	.	source_transcript=hg002_chrY_paternal_172.2;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_190.2;transcript_id=HG03009_ch_T0000310;gene_id=HG03009_ch_G0000114;Parent=HG03009_ch_T0000310;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000310:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9276785	9276995	.	+	.	source_transcript=hg002_chrY_paternal_172.2;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_190.2;transcript_id=HG03009_ch_T0000310;gene_id=HG03009_ch_G0000114;Parent=HG03009_ch_T0000310;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000310:5;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	9274199	9276995	100	+	.	source_transcript=hg002_chrY_paternal_172.3;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_190.3;transcript_id=HG03009_ch_T0000311;gene_id=HG03009_ch_G0000114;Parent=HG03009_ch_G0000114;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=HG03009_ch_T0000311;Name=TSPY10
HG03009_chrY	CAT	exon	9274199	9274730	.	+	.	source_transcript=hg002_chrY_paternal_172.3;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_190.3;transcript_id=HG03009_ch_T0000311;gene_id=HG03009_ch_G0000114;Parent=HG03009_ch_T0000311;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000311:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9274245	9274730	.	+	0	source_transcript=hg002_chrY_paternal_172.3;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_190.3;transcript_id=HG03009_ch_T0000311;gene_id=HG03009_ch_G0000114;Parent=HG03009_ch_T0000311;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000311:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	9274245	9274247	.	+	0	source_transcript=hg002_chrY_paternal_172.3;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_190.3;transcript_id=HG03009_ch_T0000311;gene_id=HG03009_ch_G0000114;Parent=HG03009_ch_T0000311;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=start_codon:HG03009_ch_T0000311;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9274731	9275337	.	+	.	source_transcript=hg002_chrY_paternal_172.3;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_190.3;transcript_id=HG03009_ch_T0000311;gene_id=HG03009_ch_G0000114;Parent=HG03009_ch_T0000311;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000311:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9275338	9275415	.	+	.	source_transcript=hg002_chrY_paternal_172.3;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_190.3;transcript_id=HG03009_ch_T0000311;gene_id=HG03009_ch_G0000114;Parent=HG03009_ch_T0000311;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000311:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9275338	9275415	.	+	0	source_transcript=hg002_chrY_paternal_172.3;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_190.3;transcript_id=HG03009_ch_T0000311;gene_id=HG03009_ch_G0000114;Parent=HG03009_ch_T0000311;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000311:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9275416	9275543	.	+	.	source_transcript=hg002_chrY_paternal_172.3;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_190.3;transcript_id=HG03009_ch_T0000311;gene_id=HG03009_ch_G0000114;Parent=HG03009_ch_T0000311;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000311:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9275544	9275655	.	+	.	source_transcript=hg002_chrY_paternal_172.3;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_190.3;transcript_id=HG03009_ch_T0000311;gene_id=HG03009_ch_G0000114;Parent=HG03009_ch_T0000311;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000311:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9275544	9275655	.	+	0	source_transcript=hg002_chrY_paternal_172.3;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_190.3;transcript_id=HG03009_ch_T0000311;gene_id=HG03009_ch_G0000114;Parent=HG03009_ch_T0000311;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000311:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9275656	9275763	.	+	.	source_transcript=hg002_chrY_paternal_172.3;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_190.3;transcript_id=HG03009_ch_T0000311;gene_id=HG03009_ch_G0000114;Parent=HG03009_ch_T0000311;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000311:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9275764	9275902	.	+	.	source_transcript=hg002_chrY_paternal_172.3;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_190.3;transcript_id=HG03009_ch_T0000311;gene_id=HG03009_ch_G0000114;Parent=HG03009_ch_T0000311;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000311:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9275764	9275902	.	+	2	source_transcript=hg002_chrY_paternal_172.3;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_190.3;transcript_id=HG03009_ch_T0000311;gene_id=HG03009_ch_G0000114;Parent=HG03009_ch_T0000311;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000311:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9275903	9276008	.	+	.	source_transcript=hg002_chrY_paternal_172.3;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_190.3;transcript_id=HG03009_ch_T0000311;gene_id=HG03009_ch_G0000114;Parent=HG03009_ch_T0000311;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000311:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9276009	9276090	.	+	.	source_transcript=hg002_chrY_paternal_172.3;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_190.3;transcript_id=HG03009_ch_T0000311;gene_id=HG03009_ch_G0000114;Parent=HG03009_ch_T0000311;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000311:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9276009	9276060	.	+	1	source_transcript=hg002_chrY_paternal_172.3;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_190.3;transcript_id=HG03009_ch_T0000311;gene_id=HG03009_ch_G0000114;Parent=HG03009_ch_T0000311;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000311:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	9276058	9276060	.	+	0	source_transcript=hg002_chrY_paternal_172.3;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_190.3;transcript_id=HG03009_ch_T0000311;gene_id=HG03009_ch_G0000114;Parent=HG03009_ch_T0000311;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=stop_codon:HG03009_ch_T0000311;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9276091	9276784	.	+	.	source_transcript=hg002_chrY_paternal_172.3;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_190.3;transcript_id=HG03009_ch_T0000311;gene_id=HG03009_ch_G0000114;Parent=HG03009_ch_T0000311;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000311:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9276785	9276995	.	+	.	source_transcript=hg002_chrY_paternal_172.3;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_190.3;transcript_id=HG03009_ch_T0000311;gene_id=HG03009_ch_G0000114;Parent=HG03009_ch_T0000311;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000311:5;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	9274199	9276995	1000	+	.	source_transcript=hg002_chrY_paternal_172.4;source_transcript_name=hg002_chrY_paternal_172.1;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_172.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.4,hg002_chrY_paternal_190.4;transcript_id=HG03009_ch_T0000312;gene_id=HG03009_ch_G0000114;Parent=HG03009_ch_G0000114;transcript_name=hg002_chrY_paternal_172.1;gene_name=TSPY10;ID=HG03009_ch_T0000312;Name=TSPY10
HG03009_chrY	CAT	exon	9274199	9274730	.	+	.	source_transcript=hg002_chrY_paternal_172.4;source_transcript_name=hg002_chrY_paternal_172.1;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_172.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.4,hg002_chrY_paternal_190.4;transcript_id=HG03009_ch_T0000312;gene_id=HG03009_ch_G0000114;Parent=HG03009_ch_T0000312;transcript_name=hg002_chrY_paternal_172.1;gene_name=TSPY10;ID=exon:HG03009_ch_T0000312:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9274731	9275337	.	+	.	source_transcript=hg002_chrY_paternal_172.4;source_transcript_name=hg002_chrY_paternal_172.1;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_172.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.4,hg002_chrY_paternal_190.4;transcript_id=HG03009_ch_T0000312;gene_id=HG03009_ch_G0000114;Parent=HG03009_ch_T0000312;transcript_name=hg002_chrY_paternal_172.1;gene_name=TSPY10;ID=intron:HG03009_ch_T0000312:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9275338	9275415	.	+	.	source_transcript=hg002_chrY_paternal_172.4;source_transcript_name=hg002_chrY_paternal_172.1;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_172.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.4,hg002_chrY_paternal_190.4;transcript_id=HG03009_ch_T0000312;gene_id=HG03009_ch_G0000114;Parent=HG03009_ch_T0000312;transcript_name=hg002_chrY_paternal_172.1;gene_name=TSPY10;ID=exon:HG03009_ch_T0000312:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9275416	9275543	.	+	.	source_transcript=hg002_chrY_paternal_172.4;source_transcript_name=hg002_chrY_paternal_172.1;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_172.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.4,hg002_chrY_paternal_190.4;transcript_id=HG03009_ch_T0000312;gene_id=HG03009_ch_G0000114;Parent=HG03009_ch_T0000312;transcript_name=hg002_chrY_paternal_172.1;gene_name=TSPY10;ID=intron:HG03009_ch_T0000312:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9275544	9275655	.	+	.	source_transcript=hg002_chrY_paternal_172.4;source_transcript_name=hg002_chrY_paternal_172.1;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_172.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.4,hg002_chrY_paternal_190.4;transcript_id=HG03009_ch_T0000312;gene_id=HG03009_ch_G0000114;Parent=HG03009_ch_T0000312;transcript_name=hg002_chrY_paternal_172.1;gene_name=TSPY10;ID=exon:HG03009_ch_T0000312:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9275656	9275763	.	+	.	source_transcript=hg002_chrY_paternal_172.4;source_transcript_name=hg002_chrY_paternal_172.1;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_172.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.4,hg002_chrY_paternal_190.4;transcript_id=HG03009_ch_T0000312;gene_id=HG03009_ch_G0000114;Parent=HG03009_ch_T0000312;transcript_name=hg002_chrY_paternal_172.1;gene_name=TSPY10;ID=intron:HG03009_ch_T0000312:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9275764	9275902	.	+	.	source_transcript=hg002_chrY_paternal_172.4;source_transcript_name=hg002_chrY_paternal_172.1;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_172.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.4,hg002_chrY_paternal_190.4;transcript_id=HG03009_ch_T0000312;gene_id=HG03009_ch_G0000114;Parent=HG03009_ch_T0000312;transcript_name=hg002_chrY_paternal_172.1;gene_name=TSPY10;ID=exon:HG03009_ch_T0000312:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9275903	9275997	.	+	.	source_transcript=hg002_chrY_paternal_172.4;source_transcript_name=hg002_chrY_paternal_172.1;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_172.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.4,hg002_chrY_paternal_190.4;transcript_id=HG03009_ch_T0000312;gene_id=HG03009_ch_G0000114;Parent=HG03009_ch_T0000312;transcript_name=hg002_chrY_paternal_172.1;gene_name=TSPY10;ID=intron:HG03009_ch_T0000312:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9275998	9276090	.	+	.	source_transcript=hg002_chrY_paternal_172.4;source_transcript_name=hg002_chrY_paternal_172.1;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_172.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.4,hg002_chrY_paternal_190.4;transcript_id=HG03009_ch_T0000312;gene_id=HG03009_ch_G0000114;Parent=HG03009_ch_T0000312;transcript_name=hg002_chrY_paternal_172.1;gene_name=TSPY10;ID=exon:HG03009_ch_T0000312:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9276091	9276784	.	+	.	source_transcript=hg002_chrY_paternal_172.4;source_transcript_name=hg002_chrY_paternal_172.1;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_172.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.4,hg002_chrY_paternal_190.4;transcript_id=HG03009_ch_T0000312;gene_id=HG03009_ch_G0000114;Parent=HG03009_ch_T0000312;transcript_name=hg002_chrY_paternal_172.1;gene_name=TSPY10;ID=intron:HG03009_ch_T0000312:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9276785	9276995	.	+	.	source_transcript=hg002_chrY_paternal_172.4;source_transcript_name=hg002_chrY_paternal_172.1;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_172.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.4,hg002_chrY_paternal_190.4;transcript_id=HG03009_ch_T0000312;gene_id=HG03009_ch_G0000114;Parent=HG03009_ch_T0000312;transcript_name=hg002_chrY_paternal_172.1;gene_name=TSPY10;ID=exon:HG03009_ch_T0000312:5;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	9286266	9291962	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_215;alternative_source_transcripts=hg002_chrY_paternal_191.1,hg002_chrY_paternal_191.1;gene_id=HG03009_ch_G0000115;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=HG03009_ch_G0000115;Name=FAM197Y2
HG03009_chrY	CAT	transcript	9286266	9291962	1000	-	.	source_transcript=hg002_chrY_paternal_215.1;source_transcript_name=hg002_chrY_paternal_215.1;source_gene=hg002_chrY_paternal_215;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_215;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_215.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_215.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_191.1,hg002_chrY_paternal_191.1;transcript_id=HG03009_ch_T0000313;gene_id=HG03009_ch_G0000115;Parent=HG03009_ch_G0000115;transcript_name=hg002_chrY_paternal_215.1;gene_name=FAM197Y2;ID=HG03009_ch_T0000313;Name=FAM197Y2
HG03009_chrY	CAT	exon	9286266	9286325	.	-	.	source_transcript=hg002_chrY_paternal_215.1;source_transcript_name=hg002_chrY_paternal_215.1;source_gene=hg002_chrY_paternal_215;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_215;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_215.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_215.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_191.1,hg002_chrY_paternal_191.1;transcript_id=HG03009_ch_T0000313;gene_id=HG03009_ch_G0000115;Parent=HG03009_ch_T0000313;transcript_name=hg002_chrY_paternal_215.1;gene_name=FAM197Y2;ID=exon:HG03009_ch_T0000313:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9286326	9289876	.	-	.	source_transcript=hg002_chrY_paternal_215.1;source_transcript_name=hg002_chrY_paternal_215.1;source_gene=hg002_chrY_paternal_215;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_215;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_215.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_215.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_191.1,hg002_chrY_paternal_191.1;transcript_id=HG03009_ch_T0000313;gene_id=HG03009_ch_G0000115;Parent=HG03009_ch_T0000313;transcript_name=hg002_chrY_paternal_215.1;gene_name=FAM197Y2;ID=intron:HG03009_ch_T0000313:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9289877	9290035	.	-	.	source_transcript=hg002_chrY_paternal_215.1;source_transcript_name=hg002_chrY_paternal_215.1;source_gene=hg002_chrY_paternal_215;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_215;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_215.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_215.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_191.1,hg002_chrY_paternal_191.1;transcript_id=HG03009_ch_T0000313;gene_id=HG03009_ch_G0000115;Parent=HG03009_ch_T0000313;transcript_name=hg002_chrY_paternal_215.1;gene_name=FAM197Y2;ID=exon:HG03009_ch_T0000313:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9290036	9291539	.	-	.	source_transcript=hg002_chrY_paternal_215.1;source_transcript_name=hg002_chrY_paternal_215.1;source_gene=hg002_chrY_paternal_215;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_215;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_215.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_215.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_191.1,hg002_chrY_paternal_191.1;transcript_id=HG03009_ch_T0000313;gene_id=HG03009_ch_G0000115;Parent=HG03009_ch_T0000313;transcript_name=hg002_chrY_paternal_215.1;gene_name=FAM197Y2;ID=intron:HG03009_ch_T0000313:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9291540	9291685	.	-	.	source_transcript=hg002_chrY_paternal_215.1;source_transcript_name=hg002_chrY_paternal_215.1;source_gene=hg002_chrY_paternal_215;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_215;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_215.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_215.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_191.1,hg002_chrY_paternal_191.1;transcript_id=HG03009_ch_T0000313;gene_id=HG03009_ch_G0000115;Parent=HG03009_ch_T0000313;transcript_name=hg002_chrY_paternal_215.1;gene_name=FAM197Y2;ID=exon:HG03009_ch_T0000313:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9291686	9291771	.	-	.	source_transcript=hg002_chrY_paternal_215.1;source_transcript_name=hg002_chrY_paternal_215.1;source_gene=hg002_chrY_paternal_215;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_215;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_215.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_215.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_191.1,hg002_chrY_paternal_191.1;transcript_id=HG03009_ch_T0000313;gene_id=HG03009_ch_G0000115;Parent=HG03009_ch_T0000313;transcript_name=hg002_chrY_paternal_215.1;gene_name=FAM197Y2;ID=intron:HG03009_ch_T0000313:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9291772	9291962	.	-	.	source_transcript=hg002_chrY_paternal_215.1;source_transcript_name=hg002_chrY_paternal_215.1;source_gene=hg002_chrY_paternal_215;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_215;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_215.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_215.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_191.1,hg002_chrY_paternal_191.1;transcript_id=HG03009_ch_T0000313;gene_id=HG03009_ch_G0000115;Parent=HG03009_ch_T0000313;transcript_name=hg002_chrY_paternal_215.1;gene_name=FAM197Y2;ID=exon:HG03009_ch_T0000313:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	9294486	9297283	.	+	.	source_gene_common_name=TSPY10;source_gene=hg002_chrY_paternal_180;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_192.1;gene_id=HG03009_ch_G0000116;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff;ID=HG03009_ch_G0000116;Name=TSPY10
HG03009_chrY	CAT	transcript	9294486	9297283	100	+	.	source_transcript=hg002_chrY_paternal_180.1;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_192.1;transcript_id=HG03009_ch_T0000314;gene_id=HG03009_ch_G0000116;Parent=HG03009_ch_G0000116;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=HG03009_ch_T0000314;Name=TSPY10
HG03009_chrY	CAT	exon	9294486	9295017	.	+	.	source_transcript=hg002_chrY_paternal_180.1;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_192.1;transcript_id=HG03009_ch_T0000314;gene_id=HG03009_ch_G0000116;Parent=HG03009_ch_T0000314;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000314:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9294532	9295017	.	+	0	source_transcript=hg002_chrY_paternal_180.1;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_192.1;transcript_id=HG03009_ch_T0000314;gene_id=HG03009_ch_G0000116;Parent=HG03009_ch_T0000314;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000314:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	9294532	9294534	.	+	0	source_transcript=hg002_chrY_paternal_180.1;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_192.1;transcript_id=HG03009_ch_T0000314;gene_id=HG03009_ch_G0000116;Parent=HG03009_ch_T0000314;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=start_codon:HG03009_ch_T0000314;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9295018	9295624	.	+	.	source_transcript=hg002_chrY_paternal_180.1;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_192.1;transcript_id=HG03009_ch_T0000314;gene_id=HG03009_ch_G0000116;Parent=HG03009_ch_T0000314;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000314:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9295625	9295702	.	+	.	source_transcript=hg002_chrY_paternal_180.1;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_192.1;transcript_id=HG03009_ch_T0000314;gene_id=HG03009_ch_G0000116;Parent=HG03009_ch_T0000314;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000314:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9295625	9295702	.	+	0	source_transcript=hg002_chrY_paternal_180.1;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_192.1;transcript_id=HG03009_ch_T0000314;gene_id=HG03009_ch_G0000116;Parent=HG03009_ch_T0000314;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000314:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9295703	9295830	.	+	.	source_transcript=hg002_chrY_paternal_180.1;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_192.1;transcript_id=HG03009_ch_T0000314;gene_id=HG03009_ch_G0000116;Parent=HG03009_ch_T0000314;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000314:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9295831	9295942	.	+	.	source_transcript=hg002_chrY_paternal_180.1;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_192.1;transcript_id=HG03009_ch_T0000314;gene_id=HG03009_ch_G0000116;Parent=HG03009_ch_T0000314;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000314:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9295831	9295942	.	+	0	source_transcript=hg002_chrY_paternal_180.1;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_192.1;transcript_id=HG03009_ch_T0000314;gene_id=HG03009_ch_G0000116;Parent=HG03009_ch_T0000314;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000314:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9295943	9296043	.	+	.	source_transcript=hg002_chrY_paternal_180.1;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_192.1;transcript_id=HG03009_ch_T0000314;gene_id=HG03009_ch_G0000116;Parent=HG03009_ch_T0000314;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000314:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9296044	9296189	.	+	.	source_transcript=hg002_chrY_paternal_180.1;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_192.1;transcript_id=HG03009_ch_T0000314;gene_id=HG03009_ch_G0000116;Parent=HG03009_ch_T0000314;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000314:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9296044	9296189	.	+	2	source_transcript=hg002_chrY_paternal_180.1;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_192.1;transcript_id=HG03009_ch_T0000314;gene_id=HG03009_ch_G0000116;Parent=HG03009_ch_T0000314;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000314:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9296190	9296295	.	+	.	source_transcript=hg002_chrY_paternal_180.1;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_192.1;transcript_id=HG03009_ch_T0000314;gene_id=HG03009_ch_G0000116;Parent=HG03009_ch_T0000314;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000314:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9296296	9296377	.	+	.	source_transcript=hg002_chrY_paternal_180.1;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_192.1;transcript_id=HG03009_ch_T0000314;gene_id=HG03009_ch_G0000116;Parent=HG03009_ch_T0000314;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000314:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9296296	9296377	.	+	0	source_transcript=hg002_chrY_paternal_180.1;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_192.1;transcript_id=HG03009_ch_T0000314;gene_id=HG03009_ch_G0000116;Parent=HG03009_ch_T0000314;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000314:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9296378	9297071	.	+	.	source_transcript=hg002_chrY_paternal_180.1;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_192.1;transcript_id=HG03009_ch_T0000314;gene_id=HG03009_ch_G0000116;Parent=HG03009_ch_T0000314;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000314:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9297072	9297283	.	+	.	source_transcript=hg002_chrY_paternal_180.1;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_192.1;transcript_id=HG03009_ch_T0000314;gene_id=HG03009_ch_G0000116;Parent=HG03009_ch_T0000314;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000314:5;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9297072	9297094	.	+	2	source_transcript=hg002_chrY_paternal_180.1;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_192.1;transcript_id=HG03009_ch_T0000314;gene_id=HG03009_ch_G0000116;Parent=HG03009_ch_T0000314;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000314:5;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	9297092	9297094	.	+	0	source_transcript=hg002_chrY_paternal_180.1;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_192.1;transcript_id=HG03009_ch_T0000314;gene_id=HG03009_ch_G0000116;Parent=HG03009_ch_T0000314;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=stop_codon:HG03009_ch_T0000314;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	9294486	9297283	100	+	.	source_transcript=hg002_chrY_paternal_180.2;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_192.2;transcript_id=HG03009_ch_T0000315;gene_id=HG03009_ch_G0000116;Parent=HG03009_ch_G0000116;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=HG03009_ch_T0000315;Name=TSPY10
HG03009_chrY	CAT	exon	9294486	9295017	.	+	.	source_transcript=hg002_chrY_paternal_180.2;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_192.2;transcript_id=HG03009_ch_T0000315;gene_id=HG03009_ch_G0000116;Parent=HG03009_ch_T0000315;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000315:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9294532	9295017	.	+	0	source_transcript=hg002_chrY_paternal_180.2;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_192.2;transcript_id=HG03009_ch_T0000315;gene_id=HG03009_ch_G0000116;Parent=HG03009_ch_T0000315;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000315:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	9294532	9294534	.	+	0	source_transcript=hg002_chrY_paternal_180.2;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_192.2;transcript_id=HG03009_ch_T0000315;gene_id=HG03009_ch_G0000116;Parent=HG03009_ch_T0000315;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=start_codon:HG03009_ch_T0000315;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9295018	9295624	.	+	.	source_transcript=hg002_chrY_paternal_180.2;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_192.2;transcript_id=HG03009_ch_T0000315;gene_id=HG03009_ch_G0000116;Parent=HG03009_ch_T0000315;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000315:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9295625	9295702	.	+	.	source_transcript=hg002_chrY_paternal_180.2;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_192.2;transcript_id=HG03009_ch_T0000315;gene_id=HG03009_ch_G0000116;Parent=HG03009_ch_T0000315;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000315:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9295625	9295702	.	+	0	source_transcript=hg002_chrY_paternal_180.2;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_192.2;transcript_id=HG03009_ch_T0000315;gene_id=HG03009_ch_G0000116;Parent=HG03009_ch_T0000315;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000315:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9295703	9295830	.	+	.	source_transcript=hg002_chrY_paternal_180.2;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_192.2;transcript_id=HG03009_ch_T0000315;gene_id=HG03009_ch_G0000116;Parent=HG03009_ch_T0000315;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000315:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9295831	9295942	.	+	.	source_transcript=hg002_chrY_paternal_180.2;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_192.2;transcript_id=HG03009_ch_T0000315;gene_id=HG03009_ch_G0000116;Parent=HG03009_ch_T0000315;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000315:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9295831	9295942	.	+	0	source_transcript=hg002_chrY_paternal_180.2;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_192.2;transcript_id=HG03009_ch_T0000315;gene_id=HG03009_ch_G0000116;Parent=HG03009_ch_T0000315;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000315:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9295943	9296043	.	+	.	source_transcript=hg002_chrY_paternal_180.2;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_192.2;transcript_id=HG03009_ch_T0000315;gene_id=HG03009_ch_G0000116;Parent=HG03009_ch_T0000315;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000315:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9296044	9296189	.	+	.	source_transcript=hg002_chrY_paternal_180.2;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_192.2;transcript_id=HG03009_ch_T0000315;gene_id=HG03009_ch_G0000116;Parent=HG03009_ch_T0000315;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000315:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9296044	9296189	.	+	2	source_transcript=hg002_chrY_paternal_180.2;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_192.2;transcript_id=HG03009_ch_T0000315;gene_id=HG03009_ch_G0000116;Parent=HG03009_ch_T0000315;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000315:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9296190	9296284	.	+	.	source_transcript=hg002_chrY_paternal_180.2;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_192.2;transcript_id=HG03009_ch_T0000315;gene_id=HG03009_ch_G0000116;Parent=HG03009_ch_T0000315;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000315:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9296285	9296377	.	+	.	source_transcript=hg002_chrY_paternal_180.2;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_192.2;transcript_id=HG03009_ch_T0000315;gene_id=HG03009_ch_G0000116;Parent=HG03009_ch_T0000315;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000315:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9296285	9296347	.	+	0	source_transcript=hg002_chrY_paternal_180.2;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_192.2;transcript_id=HG03009_ch_T0000315;gene_id=HG03009_ch_G0000116;Parent=HG03009_ch_T0000315;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000315:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	9296345	9296347	.	+	0	source_transcript=hg002_chrY_paternal_180.2;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_192.2;transcript_id=HG03009_ch_T0000315;gene_id=HG03009_ch_G0000116;Parent=HG03009_ch_T0000315;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=stop_codon:HG03009_ch_T0000315;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9296378	9297071	.	+	.	source_transcript=hg002_chrY_paternal_180.2;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_192.2;transcript_id=HG03009_ch_T0000315;gene_id=HG03009_ch_G0000116;Parent=HG03009_ch_T0000315;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000315:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9297072	9297283	.	+	.	source_transcript=hg002_chrY_paternal_180.2;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_192.2;transcript_id=HG03009_ch_T0000315;gene_id=HG03009_ch_G0000116;Parent=HG03009_ch_T0000315;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000315:5;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	9294486	9297283	100	+	.	source_transcript=hg002_chrY_paternal_180.3;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_192.3;transcript_id=HG03009_ch_T0000316;gene_id=HG03009_ch_G0000116;Parent=HG03009_ch_G0000116;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=HG03009_ch_T0000316;Name=TSPY10
HG03009_chrY	CAT	exon	9294486	9295017	.	+	.	source_transcript=hg002_chrY_paternal_180.3;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_192.3;transcript_id=HG03009_ch_T0000316;gene_id=HG03009_ch_G0000116;Parent=HG03009_ch_T0000316;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000316:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9294532	9295017	.	+	0	source_transcript=hg002_chrY_paternal_180.3;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_192.3;transcript_id=HG03009_ch_T0000316;gene_id=HG03009_ch_G0000116;Parent=HG03009_ch_T0000316;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000316:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	9294532	9294534	.	+	0	source_transcript=hg002_chrY_paternal_180.3;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_192.3;transcript_id=HG03009_ch_T0000316;gene_id=HG03009_ch_G0000116;Parent=HG03009_ch_T0000316;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=start_codon:HG03009_ch_T0000316;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9295018	9295624	.	+	.	source_transcript=hg002_chrY_paternal_180.3;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_192.3;transcript_id=HG03009_ch_T0000316;gene_id=HG03009_ch_G0000116;Parent=HG03009_ch_T0000316;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000316:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9295625	9295702	.	+	.	source_transcript=hg002_chrY_paternal_180.3;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_192.3;transcript_id=HG03009_ch_T0000316;gene_id=HG03009_ch_G0000116;Parent=HG03009_ch_T0000316;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000316:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9295625	9295702	.	+	0	source_transcript=hg002_chrY_paternal_180.3;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_192.3;transcript_id=HG03009_ch_T0000316;gene_id=HG03009_ch_G0000116;Parent=HG03009_ch_T0000316;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000316:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9295703	9295830	.	+	.	source_transcript=hg002_chrY_paternal_180.3;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_192.3;transcript_id=HG03009_ch_T0000316;gene_id=HG03009_ch_G0000116;Parent=HG03009_ch_T0000316;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000316:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9295831	9295942	.	+	.	source_transcript=hg002_chrY_paternal_180.3;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_192.3;transcript_id=HG03009_ch_T0000316;gene_id=HG03009_ch_G0000116;Parent=HG03009_ch_T0000316;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000316:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9295831	9295942	.	+	0	source_transcript=hg002_chrY_paternal_180.3;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_192.3;transcript_id=HG03009_ch_T0000316;gene_id=HG03009_ch_G0000116;Parent=HG03009_ch_T0000316;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000316:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9295943	9296050	.	+	.	source_transcript=hg002_chrY_paternal_180.3;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_192.3;transcript_id=HG03009_ch_T0000316;gene_id=HG03009_ch_G0000116;Parent=HG03009_ch_T0000316;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000316:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9296051	9296189	.	+	.	source_transcript=hg002_chrY_paternal_180.3;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_192.3;transcript_id=HG03009_ch_T0000316;gene_id=HG03009_ch_G0000116;Parent=HG03009_ch_T0000316;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000316:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9296051	9296189	.	+	2	source_transcript=hg002_chrY_paternal_180.3;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_192.3;transcript_id=HG03009_ch_T0000316;gene_id=HG03009_ch_G0000116;Parent=HG03009_ch_T0000316;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000316:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9296190	9296295	.	+	.	source_transcript=hg002_chrY_paternal_180.3;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_192.3;transcript_id=HG03009_ch_T0000316;gene_id=HG03009_ch_G0000116;Parent=HG03009_ch_T0000316;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000316:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9296296	9296377	.	+	.	source_transcript=hg002_chrY_paternal_180.3;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_192.3;transcript_id=HG03009_ch_T0000316;gene_id=HG03009_ch_G0000116;Parent=HG03009_ch_T0000316;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000316:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9296296	9296347	.	+	1	source_transcript=hg002_chrY_paternal_180.3;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_192.3;transcript_id=HG03009_ch_T0000316;gene_id=HG03009_ch_G0000116;Parent=HG03009_ch_T0000316;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000316:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	9296345	9296347	.	+	0	source_transcript=hg002_chrY_paternal_180.3;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_192.3;transcript_id=HG03009_ch_T0000316;gene_id=HG03009_ch_G0000116;Parent=HG03009_ch_T0000316;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=stop_codon:HG03009_ch_T0000316;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9296378	9297071	.	+	.	source_transcript=hg002_chrY_paternal_180.3;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_192.3;transcript_id=HG03009_ch_T0000316;gene_id=HG03009_ch_G0000116;Parent=HG03009_ch_T0000316;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000316:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9297072	9297283	.	+	.	source_transcript=hg002_chrY_paternal_180.3;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_192.3;transcript_id=HG03009_ch_T0000316;gene_id=HG03009_ch_G0000116;Parent=HG03009_ch_T0000316;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000316:5;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	9294486	9297283	1000	+	.	source_transcript=hg002_chrY_paternal_180.4;source_transcript_name=hg002_chrY_paternal_180.1;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_180.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.4,hg002_chrY_paternal_192.4;transcript_id=HG03009_ch_T0000317;gene_id=HG03009_ch_G0000116;Parent=HG03009_ch_G0000116;transcript_name=hg002_chrY_paternal_180.1;gene_name=TSPY10;ID=HG03009_ch_T0000317;Name=TSPY10
HG03009_chrY	CAT	exon	9294486	9295017	.	+	.	source_transcript=hg002_chrY_paternal_180.4;source_transcript_name=hg002_chrY_paternal_180.1;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_180.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.4,hg002_chrY_paternal_192.4;transcript_id=HG03009_ch_T0000317;gene_id=HG03009_ch_G0000116;Parent=HG03009_ch_T0000317;transcript_name=hg002_chrY_paternal_180.1;gene_name=TSPY10;ID=exon:HG03009_ch_T0000317:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9295018	9295624	.	+	.	source_transcript=hg002_chrY_paternal_180.4;source_transcript_name=hg002_chrY_paternal_180.1;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_180.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.4,hg002_chrY_paternal_192.4;transcript_id=HG03009_ch_T0000317;gene_id=HG03009_ch_G0000116;Parent=HG03009_ch_T0000317;transcript_name=hg002_chrY_paternal_180.1;gene_name=TSPY10;ID=intron:HG03009_ch_T0000317:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9295625	9295702	.	+	.	source_transcript=hg002_chrY_paternal_180.4;source_transcript_name=hg002_chrY_paternal_180.1;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_180.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.4,hg002_chrY_paternal_192.4;transcript_id=HG03009_ch_T0000317;gene_id=HG03009_ch_G0000116;Parent=HG03009_ch_T0000317;transcript_name=hg002_chrY_paternal_180.1;gene_name=TSPY10;ID=exon:HG03009_ch_T0000317:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9295703	9295830	.	+	.	source_transcript=hg002_chrY_paternal_180.4;source_transcript_name=hg002_chrY_paternal_180.1;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_180.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.4,hg002_chrY_paternal_192.4;transcript_id=HG03009_ch_T0000317;gene_id=HG03009_ch_G0000116;Parent=HG03009_ch_T0000317;transcript_name=hg002_chrY_paternal_180.1;gene_name=TSPY10;ID=intron:HG03009_ch_T0000317:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9295831	9295942	.	+	.	source_transcript=hg002_chrY_paternal_180.4;source_transcript_name=hg002_chrY_paternal_180.1;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_180.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.4,hg002_chrY_paternal_192.4;transcript_id=HG03009_ch_T0000317;gene_id=HG03009_ch_G0000116;Parent=HG03009_ch_T0000317;transcript_name=hg002_chrY_paternal_180.1;gene_name=TSPY10;ID=exon:HG03009_ch_T0000317:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9295943	9296050	.	+	.	source_transcript=hg002_chrY_paternal_180.4;source_transcript_name=hg002_chrY_paternal_180.1;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_180.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.4,hg002_chrY_paternal_192.4;transcript_id=HG03009_ch_T0000317;gene_id=HG03009_ch_G0000116;Parent=HG03009_ch_T0000317;transcript_name=hg002_chrY_paternal_180.1;gene_name=TSPY10;ID=intron:HG03009_ch_T0000317:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9296051	9296189	.	+	.	source_transcript=hg002_chrY_paternal_180.4;source_transcript_name=hg002_chrY_paternal_180.1;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_180.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.4,hg002_chrY_paternal_192.4;transcript_id=HG03009_ch_T0000317;gene_id=HG03009_ch_G0000116;Parent=HG03009_ch_T0000317;transcript_name=hg002_chrY_paternal_180.1;gene_name=TSPY10;ID=exon:HG03009_ch_T0000317:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9296190	9296284	.	+	.	source_transcript=hg002_chrY_paternal_180.4;source_transcript_name=hg002_chrY_paternal_180.1;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_180.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.4,hg002_chrY_paternal_192.4;transcript_id=HG03009_ch_T0000317;gene_id=HG03009_ch_G0000116;Parent=HG03009_ch_T0000317;transcript_name=hg002_chrY_paternal_180.1;gene_name=TSPY10;ID=intron:HG03009_ch_T0000317:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9296285	9296377	.	+	.	source_transcript=hg002_chrY_paternal_180.4;source_transcript_name=hg002_chrY_paternal_180.1;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_180.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.4,hg002_chrY_paternal_192.4;transcript_id=HG03009_ch_T0000317;gene_id=HG03009_ch_G0000116;Parent=HG03009_ch_T0000317;transcript_name=hg002_chrY_paternal_180.1;gene_name=TSPY10;ID=exon:HG03009_ch_T0000317:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9296378	9297071	.	+	.	source_transcript=hg002_chrY_paternal_180.4;source_transcript_name=hg002_chrY_paternal_180.1;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_180.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.4,hg002_chrY_paternal_192.4;transcript_id=HG03009_ch_T0000317;gene_id=HG03009_ch_G0000116;Parent=HG03009_ch_T0000317;transcript_name=hg002_chrY_paternal_180.1;gene_name=TSPY10;ID=intron:HG03009_ch_T0000317:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9297072	9297283	.	+	.	source_transcript=hg002_chrY_paternal_180.4;source_transcript_name=hg002_chrY_paternal_180.1;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_180.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.4,hg002_chrY_paternal_192.4;transcript_id=HG03009_ch_T0000317;gene_id=HG03009_ch_G0000116;Parent=HG03009_ch_T0000317;transcript_name=hg002_chrY_paternal_180.1;gene_name=TSPY10;ID=exon:HG03009_ch_T0000317:5;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	9306581	9312263	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_209;alternative_source_transcripts=hg002_chrY_paternal_193.1,hg002_chrY_paternal_193.1;gene_id=HG03009_ch_G0000117;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=HG03009_ch_G0000117;Name=FAM197Y2
HG03009_chrY	CAT	transcript	9306581	9312263	1000	-	.	source_transcript=hg002_chrY_paternal_209.1;source_transcript_name=hg002_chrY_paternal_209.1;source_gene=hg002_chrY_paternal_209;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_209;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_209.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_209.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_193.1,hg002_chrY_paternal_193.1;transcript_id=HG03009_ch_T0000318;gene_id=HG03009_ch_G0000117;Parent=HG03009_ch_G0000117;transcript_name=hg002_chrY_paternal_209.1;gene_name=FAM197Y2;ID=HG03009_ch_T0000318;Name=FAM197Y2
HG03009_chrY	CAT	exon	9306581	9306640	.	-	.	source_transcript=hg002_chrY_paternal_209.1;source_transcript_name=hg002_chrY_paternal_209.1;source_gene=hg002_chrY_paternal_209;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_209;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_209.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_209.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_193.1,hg002_chrY_paternal_193.1;transcript_id=HG03009_ch_T0000318;gene_id=HG03009_ch_G0000117;Parent=HG03009_ch_T0000318;transcript_name=hg002_chrY_paternal_209.1;gene_name=FAM197Y2;ID=exon:HG03009_ch_T0000318:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9306641	9310187	.	-	.	source_transcript=hg002_chrY_paternal_209.1;source_transcript_name=hg002_chrY_paternal_209.1;source_gene=hg002_chrY_paternal_209;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_209;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_209.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_209.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_193.1,hg002_chrY_paternal_193.1;transcript_id=HG03009_ch_T0000318;gene_id=HG03009_ch_G0000117;Parent=HG03009_ch_T0000318;transcript_name=hg002_chrY_paternal_209.1;gene_name=FAM197Y2;ID=intron:HG03009_ch_T0000318:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9310188	9310346	.	-	.	source_transcript=hg002_chrY_paternal_209.1;source_transcript_name=hg002_chrY_paternal_209.1;source_gene=hg002_chrY_paternal_209;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_209;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_209.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_209.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_193.1,hg002_chrY_paternal_193.1;transcript_id=HG03009_ch_T0000318;gene_id=HG03009_ch_G0000117;Parent=HG03009_ch_T0000318;transcript_name=hg002_chrY_paternal_209.1;gene_name=FAM197Y2;ID=exon:HG03009_ch_T0000318:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9310347	9311840	.	-	.	source_transcript=hg002_chrY_paternal_209.1;source_transcript_name=hg002_chrY_paternal_209.1;source_gene=hg002_chrY_paternal_209;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_209;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_209.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_209.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_193.1,hg002_chrY_paternal_193.1;transcript_id=HG03009_ch_T0000318;gene_id=HG03009_ch_G0000117;Parent=HG03009_ch_T0000318;transcript_name=hg002_chrY_paternal_209.1;gene_name=FAM197Y2;ID=intron:HG03009_ch_T0000318:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9311841	9311986	.	-	.	source_transcript=hg002_chrY_paternal_209.1;source_transcript_name=hg002_chrY_paternal_209.1;source_gene=hg002_chrY_paternal_209;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_209;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_209.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_209.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_193.1,hg002_chrY_paternal_193.1;transcript_id=HG03009_ch_T0000318;gene_id=HG03009_ch_G0000117;Parent=HG03009_ch_T0000318;transcript_name=hg002_chrY_paternal_209.1;gene_name=FAM197Y2;ID=exon:HG03009_ch_T0000318:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9311987	9312072	.	-	.	source_transcript=hg002_chrY_paternal_209.1;source_transcript_name=hg002_chrY_paternal_209.1;source_gene=hg002_chrY_paternal_209;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_209;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_209.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_209.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_193.1,hg002_chrY_paternal_193.1;transcript_id=HG03009_ch_T0000318;gene_id=HG03009_ch_G0000117;Parent=HG03009_ch_T0000318;transcript_name=hg002_chrY_paternal_209.1;gene_name=FAM197Y2;ID=intron:HG03009_ch_T0000318:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9312073	9312263	.	-	.	source_transcript=hg002_chrY_paternal_209.1;source_transcript_name=hg002_chrY_paternal_209.1;source_gene=hg002_chrY_paternal_209;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_209;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_209.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_209.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_193.1,hg002_chrY_paternal_193.1;transcript_id=HG03009_ch_T0000318;gene_id=HG03009_ch_G0000117;Parent=HG03009_ch_T0000318;transcript_name=hg002_chrY_paternal_209.1;gene_name=FAM197Y2;ID=exon:HG03009_ch_T0000318:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	9314788	9317584	.	+	.	source_gene_common_name=TSPY10;source_gene=hg002_chrY_paternal_200;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_194.1;gene_id=HG03009_ch_G0000118;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff;ID=HG03009_ch_G0000118;Name=TSPY10
HG03009_chrY	CAT	transcript	9314788	9317584	100	+	.	source_transcript=hg002_chrY_paternal_200.1;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_194.1;transcript_id=HG03009_ch_T0000319;gene_id=HG03009_ch_G0000118;Parent=HG03009_ch_G0000118;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=HG03009_ch_T0000319;Name=TSPY10
HG03009_chrY	CAT	exon	9314788	9315319	.	+	.	source_transcript=hg002_chrY_paternal_200.1;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_194.1;transcript_id=HG03009_ch_T0000319;gene_id=HG03009_ch_G0000118;Parent=HG03009_ch_T0000319;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000319:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9314834	9315319	.	+	0	source_transcript=hg002_chrY_paternal_200.1;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_194.1;transcript_id=HG03009_ch_T0000319;gene_id=HG03009_ch_G0000118;Parent=HG03009_ch_T0000319;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000319:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	9314834	9314836	.	+	0	source_transcript=hg002_chrY_paternal_200.1;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_194.1;transcript_id=HG03009_ch_T0000319;gene_id=HG03009_ch_G0000118;Parent=HG03009_ch_T0000319;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=start_codon:HG03009_ch_T0000319;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9315320	9315926	.	+	.	source_transcript=hg002_chrY_paternal_200.1;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_194.1;transcript_id=HG03009_ch_T0000319;gene_id=HG03009_ch_G0000118;Parent=HG03009_ch_T0000319;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000319:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9315927	9316004	.	+	.	source_transcript=hg002_chrY_paternal_200.1;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_194.1;transcript_id=HG03009_ch_T0000319;gene_id=HG03009_ch_G0000118;Parent=HG03009_ch_T0000319;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000319:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9315927	9316004	.	+	0	source_transcript=hg002_chrY_paternal_200.1;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_194.1;transcript_id=HG03009_ch_T0000319;gene_id=HG03009_ch_G0000118;Parent=HG03009_ch_T0000319;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000319:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9316005	9316132	.	+	.	source_transcript=hg002_chrY_paternal_200.1;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_194.1;transcript_id=HG03009_ch_T0000319;gene_id=HG03009_ch_G0000118;Parent=HG03009_ch_T0000319;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000319:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9316133	9316244	.	+	.	source_transcript=hg002_chrY_paternal_200.1;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_194.1;transcript_id=HG03009_ch_T0000319;gene_id=HG03009_ch_G0000118;Parent=HG03009_ch_T0000319;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000319:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9316133	9316244	.	+	0	source_transcript=hg002_chrY_paternal_200.1;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_194.1;transcript_id=HG03009_ch_T0000319;gene_id=HG03009_ch_G0000118;Parent=HG03009_ch_T0000319;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000319:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9316245	9316345	.	+	.	source_transcript=hg002_chrY_paternal_200.1;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_194.1;transcript_id=HG03009_ch_T0000319;gene_id=HG03009_ch_G0000118;Parent=HG03009_ch_T0000319;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000319:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9316346	9316491	.	+	.	source_transcript=hg002_chrY_paternal_200.1;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_194.1;transcript_id=HG03009_ch_T0000319;gene_id=HG03009_ch_G0000118;Parent=HG03009_ch_T0000319;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000319:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9316346	9316491	.	+	2	source_transcript=hg002_chrY_paternal_200.1;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_194.1;transcript_id=HG03009_ch_T0000319;gene_id=HG03009_ch_G0000118;Parent=HG03009_ch_T0000319;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000319:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9316492	9316597	.	+	.	source_transcript=hg002_chrY_paternal_200.1;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_194.1;transcript_id=HG03009_ch_T0000319;gene_id=HG03009_ch_G0000118;Parent=HG03009_ch_T0000319;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000319:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9316598	9316679	.	+	.	source_transcript=hg002_chrY_paternal_200.1;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_194.1;transcript_id=HG03009_ch_T0000319;gene_id=HG03009_ch_G0000118;Parent=HG03009_ch_T0000319;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000319:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9316598	9316679	.	+	0	source_transcript=hg002_chrY_paternal_200.1;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_194.1;transcript_id=HG03009_ch_T0000319;gene_id=HG03009_ch_G0000118;Parent=HG03009_ch_T0000319;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000319:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9316680	9317373	.	+	.	source_transcript=hg002_chrY_paternal_200.1;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_194.1;transcript_id=HG03009_ch_T0000319;gene_id=HG03009_ch_G0000118;Parent=HG03009_ch_T0000319;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000319:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9317374	9317584	.	+	.	source_transcript=hg002_chrY_paternal_200.1;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_194.1;transcript_id=HG03009_ch_T0000319;gene_id=HG03009_ch_G0000118;Parent=HG03009_ch_T0000319;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000319:5;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9317374	9317396	.	+	2	source_transcript=hg002_chrY_paternal_200.1;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_194.1;transcript_id=HG03009_ch_T0000319;gene_id=HG03009_ch_G0000118;Parent=HG03009_ch_T0000319;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000319:5;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	9317394	9317396	.	+	0	source_transcript=hg002_chrY_paternal_200.1;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_194.1;transcript_id=HG03009_ch_T0000319;gene_id=HG03009_ch_G0000118;Parent=HG03009_ch_T0000319;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=stop_codon:HG03009_ch_T0000319;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	9314788	9317584	100	+	.	source_transcript=hg002_chrY_paternal_200.2;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_194.2;transcript_id=HG03009_ch_T0000320;gene_id=HG03009_ch_G0000118;Parent=HG03009_ch_G0000118;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=HG03009_ch_T0000320;Name=TSPY10
HG03009_chrY	CAT	exon	9314788	9315319	.	+	.	source_transcript=hg002_chrY_paternal_200.2;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_194.2;transcript_id=HG03009_ch_T0000320;gene_id=HG03009_ch_G0000118;Parent=HG03009_ch_T0000320;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000320:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9314834	9315319	.	+	0	source_transcript=hg002_chrY_paternal_200.2;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_194.2;transcript_id=HG03009_ch_T0000320;gene_id=HG03009_ch_G0000118;Parent=HG03009_ch_T0000320;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000320:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	9314834	9314836	.	+	0	source_transcript=hg002_chrY_paternal_200.2;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_194.2;transcript_id=HG03009_ch_T0000320;gene_id=HG03009_ch_G0000118;Parent=HG03009_ch_T0000320;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=start_codon:HG03009_ch_T0000320;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9315320	9315926	.	+	.	source_transcript=hg002_chrY_paternal_200.2;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_194.2;transcript_id=HG03009_ch_T0000320;gene_id=HG03009_ch_G0000118;Parent=HG03009_ch_T0000320;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000320:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9315927	9316004	.	+	.	source_transcript=hg002_chrY_paternal_200.2;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_194.2;transcript_id=HG03009_ch_T0000320;gene_id=HG03009_ch_G0000118;Parent=HG03009_ch_T0000320;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000320:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9315927	9316004	.	+	0	source_transcript=hg002_chrY_paternal_200.2;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_194.2;transcript_id=HG03009_ch_T0000320;gene_id=HG03009_ch_G0000118;Parent=HG03009_ch_T0000320;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000320:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9316005	9316132	.	+	.	source_transcript=hg002_chrY_paternal_200.2;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_194.2;transcript_id=HG03009_ch_T0000320;gene_id=HG03009_ch_G0000118;Parent=HG03009_ch_T0000320;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000320:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9316133	9316244	.	+	.	source_transcript=hg002_chrY_paternal_200.2;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_194.2;transcript_id=HG03009_ch_T0000320;gene_id=HG03009_ch_G0000118;Parent=HG03009_ch_T0000320;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000320:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9316133	9316244	.	+	0	source_transcript=hg002_chrY_paternal_200.2;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_194.2;transcript_id=HG03009_ch_T0000320;gene_id=HG03009_ch_G0000118;Parent=HG03009_ch_T0000320;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000320:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9316245	9316345	.	+	.	source_transcript=hg002_chrY_paternal_200.2;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_194.2;transcript_id=HG03009_ch_T0000320;gene_id=HG03009_ch_G0000118;Parent=HG03009_ch_T0000320;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000320:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9316346	9316491	.	+	.	source_transcript=hg002_chrY_paternal_200.2;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_194.2;transcript_id=HG03009_ch_T0000320;gene_id=HG03009_ch_G0000118;Parent=HG03009_ch_T0000320;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000320:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9316346	9316491	.	+	2	source_transcript=hg002_chrY_paternal_200.2;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_194.2;transcript_id=HG03009_ch_T0000320;gene_id=HG03009_ch_G0000118;Parent=HG03009_ch_T0000320;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000320:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9316492	9316586	.	+	.	source_transcript=hg002_chrY_paternal_200.2;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_194.2;transcript_id=HG03009_ch_T0000320;gene_id=HG03009_ch_G0000118;Parent=HG03009_ch_T0000320;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000320:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9316587	9316679	.	+	.	source_transcript=hg002_chrY_paternal_200.2;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_194.2;transcript_id=HG03009_ch_T0000320;gene_id=HG03009_ch_G0000118;Parent=HG03009_ch_T0000320;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000320:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9316587	9316649	.	+	0	source_transcript=hg002_chrY_paternal_200.2;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_194.2;transcript_id=HG03009_ch_T0000320;gene_id=HG03009_ch_G0000118;Parent=HG03009_ch_T0000320;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000320:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	9316647	9316649	.	+	0	source_transcript=hg002_chrY_paternal_200.2;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_194.2;transcript_id=HG03009_ch_T0000320;gene_id=HG03009_ch_G0000118;Parent=HG03009_ch_T0000320;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=stop_codon:HG03009_ch_T0000320;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9316680	9317373	.	+	.	source_transcript=hg002_chrY_paternal_200.2;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_194.2;transcript_id=HG03009_ch_T0000320;gene_id=HG03009_ch_G0000118;Parent=HG03009_ch_T0000320;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000320:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9317374	9317584	.	+	.	source_transcript=hg002_chrY_paternal_200.2;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_194.2;transcript_id=HG03009_ch_T0000320;gene_id=HG03009_ch_G0000118;Parent=HG03009_ch_T0000320;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000320:5;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	9314788	9317584	100	+	.	source_transcript=hg002_chrY_paternal_200.3;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.3,hg002_chrY_paternal_194.3;transcript_id=HG03009_ch_T0000321;gene_id=HG03009_ch_G0000118;Parent=HG03009_ch_G0000118;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=HG03009_ch_T0000321;Name=TSPY10
HG03009_chrY	CAT	exon	9314788	9315319	.	+	.	source_transcript=hg002_chrY_paternal_200.3;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.3,hg002_chrY_paternal_194.3;transcript_id=HG03009_ch_T0000321;gene_id=HG03009_ch_G0000118;Parent=HG03009_ch_T0000321;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000321:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9314834	9315319	.	+	0	source_transcript=hg002_chrY_paternal_200.3;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.3,hg002_chrY_paternal_194.3;transcript_id=HG03009_ch_T0000321;gene_id=HG03009_ch_G0000118;Parent=HG03009_ch_T0000321;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000321:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	9314834	9314836	.	+	0	source_transcript=hg002_chrY_paternal_200.3;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.3,hg002_chrY_paternal_194.3;transcript_id=HG03009_ch_T0000321;gene_id=HG03009_ch_G0000118;Parent=HG03009_ch_T0000321;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=start_codon:HG03009_ch_T0000321;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9315320	9315926	.	+	.	source_transcript=hg002_chrY_paternal_200.3;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.3,hg002_chrY_paternal_194.3;transcript_id=HG03009_ch_T0000321;gene_id=HG03009_ch_G0000118;Parent=HG03009_ch_T0000321;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000321:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9315927	9316004	.	+	.	source_transcript=hg002_chrY_paternal_200.3;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.3,hg002_chrY_paternal_194.3;transcript_id=HG03009_ch_T0000321;gene_id=HG03009_ch_G0000118;Parent=HG03009_ch_T0000321;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000321:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9315927	9316004	.	+	0	source_transcript=hg002_chrY_paternal_200.3;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.3,hg002_chrY_paternal_194.3;transcript_id=HG03009_ch_T0000321;gene_id=HG03009_ch_G0000118;Parent=HG03009_ch_T0000321;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000321:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9316005	9316132	.	+	.	source_transcript=hg002_chrY_paternal_200.3;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.3,hg002_chrY_paternal_194.3;transcript_id=HG03009_ch_T0000321;gene_id=HG03009_ch_G0000118;Parent=HG03009_ch_T0000321;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000321:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9316133	9316244	.	+	.	source_transcript=hg002_chrY_paternal_200.3;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.3,hg002_chrY_paternal_194.3;transcript_id=HG03009_ch_T0000321;gene_id=HG03009_ch_G0000118;Parent=HG03009_ch_T0000321;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000321:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9316133	9316244	.	+	0	source_transcript=hg002_chrY_paternal_200.3;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.3,hg002_chrY_paternal_194.3;transcript_id=HG03009_ch_T0000321;gene_id=HG03009_ch_G0000118;Parent=HG03009_ch_T0000321;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000321:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9316245	9316352	.	+	.	source_transcript=hg002_chrY_paternal_200.3;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.3,hg002_chrY_paternal_194.3;transcript_id=HG03009_ch_T0000321;gene_id=HG03009_ch_G0000118;Parent=HG03009_ch_T0000321;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000321:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9316353	9316491	.	+	.	source_transcript=hg002_chrY_paternal_200.3;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.3,hg002_chrY_paternal_194.3;transcript_id=HG03009_ch_T0000321;gene_id=HG03009_ch_G0000118;Parent=HG03009_ch_T0000321;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000321:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9316353	9316491	.	+	2	source_transcript=hg002_chrY_paternal_200.3;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.3,hg002_chrY_paternal_194.3;transcript_id=HG03009_ch_T0000321;gene_id=HG03009_ch_G0000118;Parent=HG03009_ch_T0000321;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000321:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9316492	9316597	.	+	.	source_transcript=hg002_chrY_paternal_200.3;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.3,hg002_chrY_paternal_194.3;transcript_id=HG03009_ch_T0000321;gene_id=HG03009_ch_G0000118;Parent=HG03009_ch_T0000321;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000321:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9316598	9316679	.	+	.	source_transcript=hg002_chrY_paternal_200.3;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.3,hg002_chrY_paternal_194.3;transcript_id=HG03009_ch_T0000321;gene_id=HG03009_ch_G0000118;Parent=HG03009_ch_T0000321;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000321:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9316598	9316649	.	+	1	source_transcript=hg002_chrY_paternal_200.3;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.3,hg002_chrY_paternal_194.3;transcript_id=HG03009_ch_T0000321;gene_id=HG03009_ch_G0000118;Parent=HG03009_ch_T0000321;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000321:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	9316647	9316649	.	+	0	source_transcript=hg002_chrY_paternal_200.3;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.3,hg002_chrY_paternal_194.3;transcript_id=HG03009_ch_T0000321;gene_id=HG03009_ch_G0000118;Parent=HG03009_ch_T0000321;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=stop_codon:HG03009_ch_T0000321;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9316680	9317373	.	+	.	source_transcript=hg002_chrY_paternal_200.3;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.3,hg002_chrY_paternal_194.3;transcript_id=HG03009_ch_T0000321;gene_id=HG03009_ch_G0000118;Parent=HG03009_ch_T0000321;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000321:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9317374	9317584	.	+	.	source_transcript=hg002_chrY_paternal_200.3;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.3,hg002_chrY_paternal_194.3;transcript_id=HG03009_ch_T0000321;gene_id=HG03009_ch_G0000118;Parent=HG03009_ch_T0000321;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000321:5;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	9314788	9317584	1000	+	.	source_transcript=hg002_chrY_paternal_200.4;source_transcript_name=hg002_chrY_paternal_200.1;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_200.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.4,hg002_chrY_paternal_194.4;transcript_id=HG03009_ch_T0000322;gene_id=HG03009_ch_G0000118;Parent=HG03009_ch_G0000118;transcript_name=hg002_chrY_paternal_200.1;gene_name=TSPY10;ID=HG03009_ch_T0000322;Name=TSPY10
HG03009_chrY	CAT	exon	9314788	9315319	.	+	.	source_transcript=hg002_chrY_paternal_200.4;source_transcript_name=hg002_chrY_paternal_200.1;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_200.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.4,hg002_chrY_paternal_194.4;transcript_id=HG03009_ch_T0000322;gene_id=HG03009_ch_G0000118;Parent=HG03009_ch_T0000322;transcript_name=hg002_chrY_paternal_200.1;gene_name=TSPY10;ID=exon:HG03009_ch_T0000322:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9315320	9315926	.	+	.	source_transcript=hg002_chrY_paternal_200.4;source_transcript_name=hg002_chrY_paternal_200.1;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_200.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.4,hg002_chrY_paternal_194.4;transcript_id=HG03009_ch_T0000322;gene_id=HG03009_ch_G0000118;Parent=HG03009_ch_T0000322;transcript_name=hg002_chrY_paternal_200.1;gene_name=TSPY10;ID=intron:HG03009_ch_T0000322:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9315927	9316004	.	+	.	source_transcript=hg002_chrY_paternal_200.4;source_transcript_name=hg002_chrY_paternal_200.1;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_200.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.4,hg002_chrY_paternal_194.4;transcript_id=HG03009_ch_T0000322;gene_id=HG03009_ch_G0000118;Parent=HG03009_ch_T0000322;transcript_name=hg002_chrY_paternal_200.1;gene_name=TSPY10;ID=exon:HG03009_ch_T0000322:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9316005	9316132	.	+	.	source_transcript=hg002_chrY_paternal_200.4;source_transcript_name=hg002_chrY_paternal_200.1;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_200.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.4,hg002_chrY_paternal_194.4;transcript_id=HG03009_ch_T0000322;gene_id=HG03009_ch_G0000118;Parent=HG03009_ch_T0000322;transcript_name=hg002_chrY_paternal_200.1;gene_name=TSPY10;ID=intron:HG03009_ch_T0000322:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9316133	9316244	.	+	.	source_transcript=hg002_chrY_paternal_200.4;source_transcript_name=hg002_chrY_paternal_200.1;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_200.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.4,hg002_chrY_paternal_194.4;transcript_id=HG03009_ch_T0000322;gene_id=HG03009_ch_G0000118;Parent=HG03009_ch_T0000322;transcript_name=hg002_chrY_paternal_200.1;gene_name=TSPY10;ID=exon:HG03009_ch_T0000322:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9316245	9316352	.	+	.	source_transcript=hg002_chrY_paternal_200.4;source_transcript_name=hg002_chrY_paternal_200.1;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_200.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.4,hg002_chrY_paternal_194.4;transcript_id=HG03009_ch_T0000322;gene_id=HG03009_ch_G0000118;Parent=HG03009_ch_T0000322;transcript_name=hg002_chrY_paternal_200.1;gene_name=TSPY10;ID=intron:HG03009_ch_T0000322:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9316353	9316491	.	+	.	source_transcript=hg002_chrY_paternal_200.4;source_transcript_name=hg002_chrY_paternal_200.1;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_200.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.4,hg002_chrY_paternal_194.4;transcript_id=HG03009_ch_T0000322;gene_id=HG03009_ch_G0000118;Parent=HG03009_ch_T0000322;transcript_name=hg002_chrY_paternal_200.1;gene_name=TSPY10;ID=exon:HG03009_ch_T0000322:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9316492	9316586	.	+	.	source_transcript=hg002_chrY_paternal_200.4;source_transcript_name=hg002_chrY_paternal_200.1;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_200.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.4,hg002_chrY_paternal_194.4;transcript_id=HG03009_ch_T0000322;gene_id=HG03009_ch_G0000118;Parent=HG03009_ch_T0000322;transcript_name=hg002_chrY_paternal_200.1;gene_name=TSPY10;ID=intron:HG03009_ch_T0000322:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9316587	9316679	.	+	.	source_transcript=hg002_chrY_paternal_200.4;source_transcript_name=hg002_chrY_paternal_200.1;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_200.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.4,hg002_chrY_paternal_194.4;transcript_id=HG03009_ch_T0000322;gene_id=HG03009_ch_G0000118;Parent=HG03009_ch_T0000322;transcript_name=hg002_chrY_paternal_200.1;gene_name=TSPY10;ID=exon:HG03009_ch_T0000322:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9316680	9317373	.	+	.	source_transcript=hg002_chrY_paternal_200.4;source_transcript_name=hg002_chrY_paternal_200.1;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_200.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.4,hg002_chrY_paternal_194.4;transcript_id=HG03009_ch_T0000322;gene_id=HG03009_ch_G0000118;Parent=HG03009_ch_T0000322;transcript_name=hg002_chrY_paternal_200.1;gene_name=TSPY10;ID=intron:HG03009_ch_T0000322:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9317374	9317584	.	+	.	source_transcript=hg002_chrY_paternal_200.4;source_transcript_name=hg002_chrY_paternal_200.1;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_200.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.4,hg002_chrY_paternal_194.4;transcript_id=HG03009_ch_T0000322;gene_id=HG03009_ch_G0000118;Parent=HG03009_ch_T0000322;transcript_name=hg002_chrY_paternal_200.1;gene_name=TSPY10;ID=exon:HG03009_ch_T0000322:5;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	9326845	9332533	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_165;alternative_source_transcripts=hg002_chrY_paternal_195.1,hg002_chrY_paternal_195.1;gene_id=HG03009_ch_G0000119;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=HG03009_ch_G0000119;Name=FAM197Y2
HG03009_chrY	CAT	transcript	9326845	9332533	1000	-	.	source_transcript=hg002_chrY_paternal_165.1;source_transcript_name=hg002_chrY_paternal_165.1;source_gene=hg002_chrY_paternal_165;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_165;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_165.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_165.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_195.1,hg002_chrY_paternal_195.1;transcript_id=HG03009_ch_T0000323;gene_id=HG03009_ch_G0000119;Parent=HG03009_ch_G0000119;transcript_name=hg002_chrY_paternal_165.1;gene_name=FAM197Y2;ID=HG03009_ch_T0000323;Name=FAM197Y2
HG03009_chrY	CAT	exon	9326845	9326904	.	-	.	source_transcript=hg002_chrY_paternal_165.1;source_transcript_name=hg002_chrY_paternal_165.1;source_gene=hg002_chrY_paternal_165;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_165;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_165.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_165.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_195.1,hg002_chrY_paternal_195.1;transcript_id=HG03009_ch_T0000323;gene_id=HG03009_ch_G0000119;Parent=HG03009_ch_T0000323;transcript_name=hg002_chrY_paternal_165.1;gene_name=FAM197Y2;ID=exon:HG03009_ch_T0000323:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9326905	9330453	.	-	.	source_transcript=hg002_chrY_paternal_165.1;source_transcript_name=hg002_chrY_paternal_165.1;source_gene=hg002_chrY_paternal_165;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_165;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_165.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_165.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_195.1,hg002_chrY_paternal_195.1;transcript_id=HG03009_ch_T0000323;gene_id=HG03009_ch_G0000119;Parent=HG03009_ch_T0000323;transcript_name=hg002_chrY_paternal_165.1;gene_name=FAM197Y2;ID=intron:HG03009_ch_T0000323:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9330454	9330612	.	-	.	source_transcript=hg002_chrY_paternal_165.1;source_transcript_name=hg002_chrY_paternal_165.1;source_gene=hg002_chrY_paternal_165;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_165;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_165.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_165.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_195.1,hg002_chrY_paternal_195.1;transcript_id=HG03009_ch_T0000323;gene_id=HG03009_ch_G0000119;Parent=HG03009_ch_T0000323;transcript_name=hg002_chrY_paternal_165.1;gene_name=FAM197Y2;ID=exon:HG03009_ch_T0000323:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9330613	9332110	.	-	.	source_transcript=hg002_chrY_paternal_165.1;source_transcript_name=hg002_chrY_paternal_165.1;source_gene=hg002_chrY_paternal_165;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_165;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_165.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_165.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_195.1,hg002_chrY_paternal_195.1;transcript_id=HG03009_ch_T0000323;gene_id=HG03009_ch_G0000119;Parent=HG03009_ch_T0000323;transcript_name=hg002_chrY_paternal_165.1;gene_name=FAM197Y2;ID=intron:HG03009_ch_T0000323:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9332111	9332256	.	-	.	source_transcript=hg002_chrY_paternal_165.1;source_transcript_name=hg002_chrY_paternal_165.1;source_gene=hg002_chrY_paternal_165;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_165;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_165.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_165.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_195.1,hg002_chrY_paternal_195.1;transcript_id=HG03009_ch_T0000323;gene_id=HG03009_ch_G0000119;Parent=HG03009_ch_T0000323;transcript_name=hg002_chrY_paternal_165.1;gene_name=FAM197Y2;ID=exon:HG03009_ch_T0000323:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9332257	9332342	.	-	.	source_transcript=hg002_chrY_paternal_165.1;source_transcript_name=hg002_chrY_paternal_165.1;source_gene=hg002_chrY_paternal_165;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_165;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_165.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_165.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_195.1,hg002_chrY_paternal_195.1;transcript_id=HG03009_ch_T0000323;gene_id=HG03009_ch_G0000119;Parent=HG03009_ch_T0000323;transcript_name=hg002_chrY_paternal_165.1;gene_name=FAM197Y2;ID=intron:HG03009_ch_T0000323:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9332343	9332533	.	-	.	source_transcript=hg002_chrY_paternal_165.1;source_transcript_name=hg002_chrY_paternal_165.1;source_gene=hg002_chrY_paternal_165;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_165;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_165.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_165.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_195.1,hg002_chrY_paternal_195.1;transcript_id=HG03009_ch_T0000323;gene_id=HG03009_ch_G0000119;Parent=HG03009_ch_T0000323;transcript_name=hg002_chrY_paternal_165.1;gene_name=FAM197Y2;ID=exon:HG03009_ch_T0000323:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	9335057	9337853	.	+	.	source_gene_common_name=TSPY1;source_gene=hg002_chrY_paternal_214;alternative_source_transcripts=hg002_chrY_paternal_196.1,hg002_chrY_paternal_196.1;gene_id=HG03009_ch_G0000120;gene_biotype=protein_coding;gene_name=TSPY1;gene_sources=liftoff;ID=HG03009_ch_G0000120;Name=TSPY1
HG03009_chrY	CAT	transcript	9335057	9337853	10000	+	.	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.1,hg002_chrY_paternal_196.1;transcript_id=HG03009_ch_T0000324;gene_id=HG03009_ch_G0000120;Parent=HG03009_ch_G0000120;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=HG03009_ch_T0000324;Name=TSPY1
HG03009_chrY	CAT	exon	9335057	9335588	.	+	.	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.1,hg002_chrY_paternal_196.1;transcript_id=HG03009_ch_T0000324;gene_id=HG03009_ch_G0000120;Parent=HG03009_ch_T0000324;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000324:0;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9335103	9335588	.	+	0	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.1,hg002_chrY_paternal_196.1;transcript_id=HG03009_ch_T0000324;gene_id=HG03009_ch_G0000120;Parent=HG03009_ch_T0000324;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000324:0;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	9335103	9335105	.	+	0	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.1,hg002_chrY_paternal_196.1;transcript_id=HG03009_ch_T0000324;gene_id=HG03009_ch_G0000120;Parent=HG03009_ch_T0000324;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=start_codon:HG03009_ch_T0000324;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9335589	9336195	.	+	.	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.1,hg002_chrY_paternal_196.1;transcript_id=HG03009_ch_T0000324;gene_id=HG03009_ch_G0000120;Parent=HG03009_ch_T0000324;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000324:0;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9336196	9336273	.	+	.	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.1,hg002_chrY_paternal_196.1;transcript_id=HG03009_ch_T0000324;gene_id=HG03009_ch_G0000120;Parent=HG03009_ch_T0000324;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000324:1;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9336196	9336273	.	+	0	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.1,hg002_chrY_paternal_196.1;transcript_id=HG03009_ch_T0000324;gene_id=HG03009_ch_G0000120;Parent=HG03009_ch_T0000324;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000324:1;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9336274	9336401	.	+	.	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.1,hg002_chrY_paternal_196.1;transcript_id=HG03009_ch_T0000324;gene_id=HG03009_ch_G0000120;Parent=HG03009_ch_T0000324;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000324:1;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9336402	9336513	.	+	.	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.1,hg002_chrY_paternal_196.1;transcript_id=HG03009_ch_T0000324;gene_id=HG03009_ch_G0000120;Parent=HG03009_ch_T0000324;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000324:2;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9336402	9336513	.	+	0	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.1,hg002_chrY_paternal_196.1;transcript_id=HG03009_ch_T0000324;gene_id=HG03009_ch_G0000120;Parent=HG03009_ch_T0000324;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000324:2;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9336514	9336614	.	+	.	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.1,hg002_chrY_paternal_196.1;transcript_id=HG03009_ch_T0000324;gene_id=HG03009_ch_G0000120;Parent=HG03009_ch_T0000324;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000324:2;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9336615	9336760	.	+	.	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.1,hg002_chrY_paternal_196.1;transcript_id=HG03009_ch_T0000324;gene_id=HG03009_ch_G0000120;Parent=HG03009_ch_T0000324;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000324:3;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9336615	9336760	.	+	2	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.1,hg002_chrY_paternal_196.1;transcript_id=HG03009_ch_T0000324;gene_id=HG03009_ch_G0000120;Parent=HG03009_ch_T0000324;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000324:3;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9336761	9336855	.	+	.	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.1,hg002_chrY_paternal_196.1;transcript_id=HG03009_ch_T0000324;gene_id=HG03009_ch_G0000120;Parent=HG03009_ch_T0000324;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000324:3;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9336856	9336948	.	+	.	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.1,hg002_chrY_paternal_196.1;transcript_id=HG03009_ch_T0000324;gene_id=HG03009_ch_G0000120;Parent=HG03009_ch_T0000324;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000324:4;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9336856	9336918	.	+	0	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.1,hg002_chrY_paternal_196.1;transcript_id=HG03009_ch_T0000324;gene_id=HG03009_ch_G0000120;Parent=HG03009_ch_T0000324;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000324:4;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	9336916	9336918	.	+	0	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.1,hg002_chrY_paternal_196.1;transcript_id=HG03009_ch_T0000324;gene_id=HG03009_ch_G0000120;Parent=HG03009_ch_T0000324;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=stop_codon:HG03009_ch_T0000324;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9336949	9337642	.	+	.	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.1,hg002_chrY_paternal_196.1;transcript_id=HG03009_ch_T0000324;gene_id=HG03009_ch_G0000120;Parent=HG03009_ch_T0000324;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000324:4;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9337643	9337853	.	+	.	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.1,hg002_chrY_paternal_196.1;transcript_id=HG03009_ch_T0000324;gene_id=HG03009_ch_G0000120;Parent=HG03009_ch_T0000324;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000324:5;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	9335057	9337853	10000	+	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2,hg002_chrY_paternal_196.2;transcript_id=HG03009_ch_T0000325;gene_id=HG03009_ch_G0000120;Parent=HG03009_ch_G0000120;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=HG03009_ch_T0000325;Name=TSPY1
HG03009_chrY	CAT	exon	9335057	9335189	.	+	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2,hg002_chrY_paternal_196.2;transcript_id=HG03009_ch_T0000325;gene_id=HG03009_ch_G0000120;Parent=HG03009_ch_T0000325;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000325:0;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9335103	9335189	.	+	0	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2,hg002_chrY_paternal_196.2;transcript_id=HG03009_ch_T0000325;gene_id=HG03009_ch_G0000120;Parent=HG03009_ch_T0000325;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000325:0;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	9335103	9335105	.	+	0	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2,hg002_chrY_paternal_196.2;transcript_id=HG03009_ch_T0000325;gene_id=HG03009_ch_G0000120;Parent=HG03009_ch_T0000325;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=start_codon:HG03009_ch_T0000325;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9335190	9335450	.	+	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2,hg002_chrY_paternal_196.2;transcript_id=HG03009_ch_T0000325;gene_id=HG03009_ch_G0000120;Parent=HG03009_ch_T0000325;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000325:0;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9335451	9335588	.	+	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2,hg002_chrY_paternal_196.2;transcript_id=HG03009_ch_T0000325;gene_id=HG03009_ch_G0000120;Parent=HG03009_ch_T0000325;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000325:1;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9335451	9335588	.	+	0	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2,hg002_chrY_paternal_196.2;transcript_id=HG03009_ch_T0000325;gene_id=HG03009_ch_G0000120;Parent=HG03009_ch_T0000325;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000325:1;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9335589	9336195	.	+	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2,hg002_chrY_paternal_196.2;transcript_id=HG03009_ch_T0000325;gene_id=HG03009_ch_G0000120;Parent=HG03009_ch_T0000325;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000325:1;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9336196	9336273	.	+	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2,hg002_chrY_paternal_196.2;transcript_id=HG03009_ch_T0000325;gene_id=HG03009_ch_G0000120;Parent=HG03009_ch_T0000325;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000325:2;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9336196	9336273	.	+	0	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2,hg002_chrY_paternal_196.2;transcript_id=HG03009_ch_T0000325;gene_id=HG03009_ch_G0000120;Parent=HG03009_ch_T0000325;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000325:2;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9336274	9336401	.	+	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2,hg002_chrY_paternal_196.2;transcript_id=HG03009_ch_T0000325;gene_id=HG03009_ch_G0000120;Parent=HG03009_ch_T0000325;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000325:2;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9336402	9336513	.	+	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2,hg002_chrY_paternal_196.2;transcript_id=HG03009_ch_T0000325;gene_id=HG03009_ch_G0000120;Parent=HG03009_ch_T0000325;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000325:3;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9336402	9336513	.	+	0	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2,hg002_chrY_paternal_196.2;transcript_id=HG03009_ch_T0000325;gene_id=HG03009_ch_G0000120;Parent=HG03009_ch_T0000325;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000325:3;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9336514	9336614	.	+	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2,hg002_chrY_paternal_196.2;transcript_id=HG03009_ch_T0000325;gene_id=HG03009_ch_G0000120;Parent=HG03009_ch_T0000325;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000325:3;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9336615	9336760	.	+	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2,hg002_chrY_paternal_196.2;transcript_id=HG03009_ch_T0000325;gene_id=HG03009_ch_G0000120;Parent=HG03009_ch_T0000325;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000325:4;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9336615	9336760	.	+	2	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2,hg002_chrY_paternal_196.2;transcript_id=HG03009_ch_T0000325;gene_id=HG03009_ch_G0000120;Parent=HG03009_ch_T0000325;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000325:4;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9336761	9336866	.	+	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2,hg002_chrY_paternal_196.2;transcript_id=HG03009_ch_T0000325;gene_id=HG03009_ch_G0000120;Parent=HG03009_ch_T0000325;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000325:4;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9336867	9336948	.	+	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2,hg002_chrY_paternal_196.2;transcript_id=HG03009_ch_T0000325;gene_id=HG03009_ch_G0000120;Parent=HG03009_ch_T0000325;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000325:5;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9336867	9336948	.	+	0	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2,hg002_chrY_paternal_196.2;transcript_id=HG03009_ch_T0000325;gene_id=HG03009_ch_G0000120;Parent=HG03009_ch_T0000325;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000325:5;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9336949	9337642	.	+	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2,hg002_chrY_paternal_196.2;transcript_id=HG03009_ch_T0000325;gene_id=HG03009_ch_G0000120;Parent=HG03009_ch_T0000325;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000325:5;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9337643	9337853	.	+	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2,hg002_chrY_paternal_196.2;transcript_id=HG03009_ch_T0000325;gene_id=HG03009_ch_G0000120;Parent=HG03009_ch_T0000325;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000325:6;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9337643	9337665	.	+	2	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2,hg002_chrY_paternal_196.2;transcript_id=HG03009_ch_T0000325;gene_id=HG03009_ch_G0000120;Parent=HG03009_ch_T0000325;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000325:6;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	9337663	9337665	.	+	0	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2,hg002_chrY_paternal_196.2;transcript_id=HG03009_ch_T0000325;gene_id=HG03009_ch_G0000120;Parent=HG03009_ch_T0000325;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=stop_codon:HG03009_ch_T0000325;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	9335057	9337853	10000	+	.	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.3,hg002_chrY_paternal_196.3;transcript_id=HG03009_ch_T0000326;gene_id=HG03009_ch_G0000120;Parent=HG03009_ch_G0000120;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=HG03009_ch_T0000326;Name=TSPY1
HG03009_chrY	CAT	exon	9335057	9335588	.	+	.	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.3,hg002_chrY_paternal_196.3;transcript_id=HG03009_ch_T0000326;gene_id=HG03009_ch_G0000120;Parent=HG03009_ch_T0000326;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000326:0;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9335103	9335588	.	+	0	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.3,hg002_chrY_paternal_196.3;transcript_id=HG03009_ch_T0000326;gene_id=HG03009_ch_G0000120;Parent=HG03009_ch_T0000326;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000326:0;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	9335103	9335105	.	+	0	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.3,hg002_chrY_paternal_196.3;transcript_id=HG03009_ch_T0000326;gene_id=HG03009_ch_G0000120;Parent=HG03009_ch_T0000326;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=start_codon:HG03009_ch_T0000326;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9335589	9336195	.	+	.	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.3,hg002_chrY_paternal_196.3;transcript_id=HG03009_ch_T0000326;gene_id=HG03009_ch_G0000120;Parent=HG03009_ch_T0000326;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000326:0;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9336196	9336273	.	+	.	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.3,hg002_chrY_paternal_196.3;transcript_id=HG03009_ch_T0000326;gene_id=HG03009_ch_G0000120;Parent=HG03009_ch_T0000326;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000326:1;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9336196	9336273	.	+	0	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.3,hg002_chrY_paternal_196.3;transcript_id=HG03009_ch_T0000326;gene_id=HG03009_ch_G0000120;Parent=HG03009_ch_T0000326;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000326:1;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9336274	9336401	.	+	.	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.3,hg002_chrY_paternal_196.3;transcript_id=HG03009_ch_T0000326;gene_id=HG03009_ch_G0000120;Parent=HG03009_ch_T0000326;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000326:1;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9336402	9336513	.	+	.	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.3,hg002_chrY_paternal_196.3;transcript_id=HG03009_ch_T0000326;gene_id=HG03009_ch_G0000120;Parent=HG03009_ch_T0000326;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000326:2;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9336402	9336513	.	+	0	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.3,hg002_chrY_paternal_196.3;transcript_id=HG03009_ch_T0000326;gene_id=HG03009_ch_G0000120;Parent=HG03009_ch_T0000326;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000326:2;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9336514	9336614	.	+	.	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.3,hg002_chrY_paternal_196.3;transcript_id=HG03009_ch_T0000326;gene_id=HG03009_ch_G0000120;Parent=HG03009_ch_T0000326;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000326:2;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9336615	9336760	.	+	.	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.3,hg002_chrY_paternal_196.3;transcript_id=HG03009_ch_T0000326;gene_id=HG03009_ch_G0000120;Parent=HG03009_ch_T0000326;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000326:3;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9336615	9336760	.	+	2	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.3,hg002_chrY_paternal_196.3;transcript_id=HG03009_ch_T0000326;gene_id=HG03009_ch_G0000120;Parent=HG03009_ch_T0000326;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000326:3;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9336761	9336866	.	+	.	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.3,hg002_chrY_paternal_196.3;transcript_id=HG03009_ch_T0000326;gene_id=HG03009_ch_G0000120;Parent=HG03009_ch_T0000326;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000326:3;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9336867	9336948	.	+	.	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.3,hg002_chrY_paternal_196.3;transcript_id=HG03009_ch_T0000326;gene_id=HG03009_ch_G0000120;Parent=HG03009_ch_T0000326;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000326:4;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9336867	9336948	.	+	0	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.3,hg002_chrY_paternal_196.3;transcript_id=HG03009_ch_T0000326;gene_id=HG03009_ch_G0000120;Parent=HG03009_ch_T0000326;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000326:4;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9336949	9337642	.	+	.	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.3,hg002_chrY_paternal_196.3;transcript_id=HG03009_ch_T0000326;gene_id=HG03009_ch_G0000120;Parent=HG03009_ch_T0000326;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000326:4;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9337643	9337853	.	+	.	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.3,hg002_chrY_paternal_196.3;transcript_id=HG03009_ch_T0000326;gene_id=HG03009_ch_G0000120;Parent=HG03009_ch_T0000326;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000326:5;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9337643	9337665	.	+	2	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.3,hg002_chrY_paternal_196.3;transcript_id=HG03009_ch_T0000326;gene_id=HG03009_ch_G0000120;Parent=HG03009_ch_T0000326;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000326:5;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	9337663	9337665	.	+	0	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.3,hg002_chrY_paternal_196.3;transcript_id=HG03009_ch_T0000326;gene_id=HG03009_ch_G0000120;Parent=HG03009_ch_T0000326;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=stop_codon:HG03009_ch_T0000326;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	9335057	9337853	10000	+	.	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.4,hg002_chrY_paternal_196.4;transcript_id=HG03009_ch_T0000327;gene_id=HG03009_ch_G0000120;Parent=HG03009_ch_G0000120;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=HG03009_ch_T0000327;Name=TSPY1
HG03009_chrY	CAT	exon	9335057	9335588	.	+	.	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.4,hg002_chrY_paternal_196.4;transcript_id=HG03009_ch_T0000327;gene_id=HG03009_ch_G0000120;Parent=HG03009_ch_T0000327;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000327:0;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9335103	9335588	.	+	0	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.4,hg002_chrY_paternal_196.4;transcript_id=HG03009_ch_T0000327;gene_id=HG03009_ch_G0000120;Parent=HG03009_ch_T0000327;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000327:0;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	9335103	9335105	.	+	0	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.4,hg002_chrY_paternal_196.4;transcript_id=HG03009_ch_T0000327;gene_id=HG03009_ch_G0000120;Parent=HG03009_ch_T0000327;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=start_codon:HG03009_ch_T0000327;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9335589	9336195	.	+	.	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.4,hg002_chrY_paternal_196.4;transcript_id=HG03009_ch_T0000327;gene_id=HG03009_ch_G0000120;Parent=HG03009_ch_T0000327;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000327:0;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9336196	9336273	.	+	.	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.4,hg002_chrY_paternal_196.4;transcript_id=HG03009_ch_T0000327;gene_id=HG03009_ch_G0000120;Parent=HG03009_ch_T0000327;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000327:1;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9336196	9336273	.	+	0	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.4,hg002_chrY_paternal_196.4;transcript_id=HG03009_ch_T0000327;gene_id=HG03009_ch_G0000120;Parent=HG03009_ch_T0000327;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000327:1;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9336274	9336401	.	+	.	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.4,hg002_chrY_paternal_196.4;transcript_id=HG03009_ch_T0000327;gene_id=HG03009_ch_G0000120;Parent=HG03009_ch_T0000327;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000327:1;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9336402	9336513	.	+	.	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.4,hg002_chrY_paternal_196.4;transcript_id=HG03009_ch_T0000327;gene_id=HG03009_ch_G0000120;Parent=HG03009_ch_T0000327;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000327:2;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9336402	9336513	.	+	0	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.4,hg002_chrY_paternal_196.4;transcript_id=HG03009_ch_T0000327;gene_id=HG03009_ch_G0000120;Parent=HG03009_ch_T0000327;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000327:2;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9336514	9336621	.	+	.	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.4,hg002_chrY_paternal_196.4;transcript_id=HG03009_ch_T0000327;gene_id=HG03009_ch_G0000120;Parent=HG03009_ch_T0000327;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000327:2;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9336622	9336760	.	+	.	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.4,hg002_chrY_paternal_196.4;transcript_id=HG03009_ch_T0000327;gene_id=HG03009_ch_G0000120;Parent=HG03009_ch_T0000327;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000327:3;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9336622	9336760	.	+	2	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.4,hg002_chrY_paternal_196.4;transcript_id=HG03009_ch_T0000327;gene_id=HG03009_ch_G0000120;Parent=HG03009_ch_T0000327;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000327:3;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9336761	9336866	.	+	.	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.4,hg002_chrY_paternal_196.4;transcript_id=HG03009_ch_T0000327;gene_id=HG03009_ch_G0000120;Parent=HG03009_ch_T0000327;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000327:3;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9336867	9336948	.	+	.	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.4,hg002_chrY_paternal_196.4;transcript_id=HG03009_ch_T0000327;gene_id=HG03009_ch_G0000120;Parent=HG03009_ch_T0000327;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000327:4;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9336867	9336918	.	+	1	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.4,hg002_chrY_paternal_196.4;transcript_id=HG03009_ch_T0000327;gene_id=HG03009_ch_G0000120;Parent=HG03009_ch_T0000327;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000327:4;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	9336916	9336918	.	+	0	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.4,hg002_chrY_paternal_196.4;transcript_id=HG03009_ch_T0000327;gene_id=HG03009_ch_G0000120;Parent=HG03009_ch_T0000327;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=stop_codon:HG03009_ch_T0000327;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9336949	9337642	.	+	.	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.4,hg002_chrY_paternal_196.4;transcript_id=HG03009_ch_T0000327;gene_id=HG03009_ch_G0000120;Parent=HG03009_ch_T0000327;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000327:4;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9337643	9337853	.	+	.	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.4,hg002_chrY_paternal_196.4;transcript_id=HG03009_ch_T0000327;gene_id=HG03009_ch_G0000120;Parent=HG03009_ch_T0000327;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000327:5;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	9335057	9337853	1000	+	.	source_transcript=hg002_chrY_paternal_214.5;source_transcript_name=hg002_chrY_paternal_214.1;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_214.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.5,hg002_chrY_paternal_196.5;transcript_id=HG03009_ch_T0000328;gene_id=HG03009_ch_G0000120;Parent=HG03009_ch_G0000120;transcript_name=hg002_chrY_paternal_214.1;gene_name=TSPY1;ID=HG03009_ch_T0000328;Name=TSPY1
HG03009_chrY	CAT	exon	9335057	9335588	.	+	.	source_transcript=hg002_chrY_paternal_214.5;source_transcript_name=hg002_chrY_paternal_214.1;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_214.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.5,hg002_chrY_paternal_196.5;transcript_id=HG03009_ch_T0000328;gene_id=HG03009_ch_G0000120;Parent=HG03009_ch_T0000328;transcript_name=hg002_chrY_paternal_214.1;gene_name=TSPY1;ID=exon:HG03009_ch_T0000328:0;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9335589	9336195	.	+	.	source_transcript=hg002_chrY_paternal_214.5;source_transcript_name=hg002_chrY_paternal_214.1;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_214.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.5,hg002_chrY_paternal_196.5;transcript_id=HG03009_ch_T0000328;gene_id=HG03009_ch_G0000120;Parent=HG03009_ch_T0000328;transcript_name=hg002_chrY_paternal_214.1;gene_name=TSPY1;ID=intron:HG03009_ch_T0000328:0;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9336196	9336273	.	+	.	source_transcript=hg002_chrY_paternal_214.5;source_transcript_name=hg002_chrY_paternal_214.1;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_214.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.5,hg002_chrY_paternal_196.5;transcript_id=HG03009_ch_T0000328;gene_id=HG03009_ch_G0000120;Parent=HG03009_ch_T0000328;transcript_name=hg002_chrY_paternal_214.1;gene_name=TSPY1;ID=exon:HG03009_ch_T0000328:1;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9336274	9336401	.	+	.	source_transcript=hg002_chrY_paternal_214.5;source_transcript_name=hg002_chrY_paternal_214.1;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_214.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.5,hg002_chrY_paternal_196.5;transcript_id=HG03009_ch_T0000328;gene_id=HG03009_ch_G0000120;Parent=HG03009_ch_T0000328;transcript_name=hg002_chrY_paternal_214.1;gene_name=TSPY1;ID=intron:HG03009_ch_T0000328:1;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9336402	9336513	.	+	.	source_transcript=hg002_chrY_paternal_214.5;source_transcript_name=hg002_chrY_paternal_214.1;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_214.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.5,hg002_chrY_paternal_196.5;transcript_id=HG03009_ch_T0000328;gene_id=HG03009_ch_G0000120;Parent=HG03009_ch_T0000328;transcript_name=hg002_chrY_paternal_214.1;gene_name=TSPY1;ID=exon:HG03009_ch_T0000328:2;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9336514	9336621	.	+	.	source_transcript=hg002_chrY_paternal_214.5;source_transcript_name=hg002_chrY_paternal_214.1;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_214.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.5,hg002_chrY_paternal_196.5;transcript_id=HG03009_ch_T0000328;gene_id=HG03009_ch_G0000120;Parent=HG03009_ch_T0000328;transcript_name=hg002_chrY_paternal_214.1;gene_name=TSPY1;ID=intron:HG03009_ch_T0000328:2;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9336622	9336760	.	+	.	source_transcript=hg002_chrY_paternal_214.5;source_transcript_name=hg002_chrY_paternal_214.1;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_214.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.5,hg002_chrY_paternal_196.5;transcript_id=HG03009_ch_T0000328;gene_id=HG03009_ch_G0000120;Parent=HG03009_ch_T0000328;transcript_name=hg002_chrY_paternal_214.1;gene_name=TSPY1;ID=exon:HG03009_ch_T0000328:3;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9336761	9336855	.	+	.	source_transcript=hg002_chrY_paternal_214.5;source_transcript_name=hg002_chrY_paternal_214.1;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_214.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.5,hg002_chrY_paternal_196.5;transcript_id=HG03009_ch_T0000328;gene_id=HG03009_ch_G0000120;Parent=HG03009_ch_T0000328;transcript_name=hg002_chrY_paternal_214.1;gene_name=TSPY1;ID=intron:HG03009_ch_T0000328:3;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9336856	9336948	.	+	.	source_transcript=hg002_chrY_paternal_214.5;source_transcript_name=hg002_chrY_paternal_214.1;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_214.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.5,hg002_chrY_paternal_196.5;transcript_id=HG03009_ch_T0000328;gene_id=HG03009_ch_G0000120;Parent=HG03009_ch_T0000328;transcript_name=hg002_chrY_paternal_214.1;gene_name=TSPY1;ID=exon:HG03009_ch_T0000328:4;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9336949	9337642	.	+	.	source_transcript=hg002_chrY_paternal_214.5;source_transcript_name=hg002_chrY_paternal_214.1;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_214.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.5,hg002_chrY_paternal_196.5;transcript_id=HG03009_ch_T0000328;gene_id=HG03009_ch_G0000120;Parent=HG03009_ch_T0000328;transcript_name=hg002_chrY_paternal_214.1;gene_name=TSPY1;ID=intron:HG03009_ch_T0000328:4;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9337643	9337853	.	+	.	source_transcript=hg002_chrY_paternal_214.5;source_transcript_name=hg002_chrY_paternal_214.1;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_214.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.5,hg002_chrY_paternal_196.5;transcript_id=HG03009_ch_T0000328;gene_id=HG03009_ch_G0000120;Parent=HG03009_ch_T0000328;transcript_name=hg002_chrY_paternal_214.1;gene_name=TSPY1;ID=exon:HG03009_ch_T0000328:5;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	9347127	9352743	.	-	.	source_gene_common_name=FAM197Y3;source_gene=hg002_chrY_paternal_201;alternative_source_transcripts=hg002_chrY_paternal_197.1,hg002_chrY_paternal_197.1;gene_id=HG03009_ch_G0000121;gene_biotype=lncRNA;gene_name=FAM197Y3;gene_sources=liftoff;ID=HG03009_ch_G0000121;Name=FAM197Y3
HG03009_chrY	CAT	transcript	9347127	9352743	1000	-	.	source_transcript=hg002_chrY_paternal_201.1;source_transcript_name=hg002_chrY_paternal_201.1;source_gene=hg002_chrY_paternal_201;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_201;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_201.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_201.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_197.1,hg002_chrY_paternal_197.1;transcript_id=HG03009_ch_T0000329;gene_id=HG03009_ch_G0000121;Parent=HG03009_ch_G0000121;transcript_name=hg002_chrY_paternal_201.1;gene_name=FAM197Y3;ID=HG03009_ch_T0000329;Name=FAM197Y3
HG03009_chrY	CAT	exon	9347127	9347186	.	-	.	source_transcript=hg002_chrY_paternal_201.1;source_transcript_name=hg002_chrY_paternal_201.1;source_gene=hg002_chrY_paternal_201;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_201;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_201.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_201.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_197.1,hg002_chrY_paternal_197.1;transcript_id=HG03009_ch_T0000329;gene_id=HG03009_ch_G0000121;Parent=HG03009_ch_T0000329;transcript_name=hg002_chrY_paternal_201.1;gene_name=FAM197Y3;ID=exon:HG03009_ch_T0000329:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9347187	9350736	.	-	.	source_transcript=hg002_chrY_paternal_201.1;source_transcript_name=hg002_chrY_paternal_201.1;source_gene=hg002_chrY_paternal_201;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_201;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_201.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_201.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_197.1,hg002_chrY_paternal_197.1;transcript_id=HG03009_ch_T0000329;gene_id=HG03009_ch_G0000121;Parent=HG03009_ch_T0000329;transcript_name=hg002_chrY_paternal_201.1;gene_name=FAM197Y3;ID=intron:HG03009_ch_T0000329:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9350737	9350895	.	-	.	source_transcript=hg002_chrY_paternal_201.1;source_transcript_name=hg002_chrY_paternal_201.1;source_gene=hg002_chrY_paternal_201;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_201;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_201.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_201.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_197.1,hg002_chrY_paternal_197.1;transcript_id=HG03009_ch_T0000329;gene_id=HG03009_ch_G0000121;Parent=HG03009_ch_T0000329;transcript_name=hg002_chrY_paternal_201.1;gene_name=FAM197Y3;ID=exon:HG03009_ch_T0000329:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9350896	9352409	.	-	.	source_transcript=hg002_chrY_paternal_201.1;source_transcript_name=hg002_chrY_paternal_201.1;source_gene=hg002_chrY_paternal_201;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_201;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_201.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_201.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_197.1,hg002_chrY_paternal_197.1;transcript_id=HG03009_ch_T0000329;gene_id=HG03009_ch_G0000121;Parent=HG03009_ch_T0000329;transcript_name=hg002_chrY_paternal_201.1;gene_name=FAM197Y3;ID=intron:HG03009_ch_T0000329:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9352410	9352555	.	-	.	source_transcript=hg002_chrY_paternal_201.1;source_transcript_name=hg002_chrY_paternal_201.1;source_gene=hg002_chrY_paternal_201;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_201;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_201.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_201.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_197.1,hg002_chrY_paternal_197.1;transcript_id=HG03009_ch_T0000329;gene_id=HG03009_ch_G0000121;Parent=HG03009_ch_T0000329;transcript_name=hg002_chrY_paternal_201.1;gene_name=FAM197Y3;ID=exon:HG03009_ch_T0000329:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9352556	9352641	.	-	.	source_transcript=hg002_chrY_paternal_201.1;source_transcript_name=hg002_chrY_paternal_201.1;source_gene=hg002_chrY_paternal_201;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_201;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_201.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_201.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_197.1,hg002_chrY_paternal_197.1;transcript_id=HG03009_ch_T0000329;gene_id=HG03009_ch_G0000121;Parent=HG03009_ch_T0000329;transcript_name=hg002_chrY_paternal_201.1;gene_name=FAM197Y3;ID=intron:HG03009_ch_T0000329:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9352642	9352743	.	-	.	source_transcript=hg002_chrY_paternal_201.1;source_transcript_name=hg002_chrY_paternal_201.1;source_gene=hg002_chrY_paternal_201;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_201;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_201.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_201.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_197.1,hg002_chrY_paternal_197.1;transcript_id=HG03009_ch_T0000329;gene_id=HG03009_ch_G0000121;Parent=HG03009_ch_T0000329;transcript_name=hg002_chrY_paternal_201.1;gene_name=FAM197Y3;ID=exon:HG03009_ch_T0000329:3;Name=FAM197Y3;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	9355356	9358152	.	+	.	source_gene_common_name=TSPY1;source_gene=hg002_chrY_paternal_198;alternative_source_transcripts=hg002_chrY_paternal_198.2;gene_id=HG03009_ch_G0000122;gene_biotype=protein_coding;gene_name=TSPY1;gene_sources=augTM,transMap;ID=HG03009_ch_G0000122;Name=TSPY1
HG03009_chrY	CAT	transcript	9355356	9358152	9980	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=299.85;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000330;gene_id=HG03009_ch_G0000122;Parent=HG03009_ch_G0000122;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=HG03009_ch_T0000330;Name=TSPY1
HG03009_chrY	CAT	exon	9355356	9355488	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000330;gene_id=HG03009_ch_G0000122;Parent=HG03009_ch_T0000330;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000330:0;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9355402	9355488	.	+	0	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000330;gene_id=HG03009_ch_G0000122;Parent=HG03009_ch_T0000330;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000330:0;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	9355402	9355404	.	+	0	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000330;gene_id=HG03009_ch_G0000122;Parent=HG03009_ch_T0000330;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=start_codon:HG03009_ch_T0000330;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9355489	9355749	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000330;gene_id=HG03009_ch_G0000122;Parent=HG03009_ch_T0000330;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000330:0;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9355750	9355887	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000330;gene_id=HG03009_ch_G0000122;Parent=HG03009_ch_T0000330;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000330:1;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9355750	9355887	.	+	0	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000330;gene_id=HG03009_ch_G0000122;Parent=HG03009_ch_T0000330;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000330:1;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9355888	9356494	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000330;gene_id=HG03009_ch_G0000122;Parent=HG03009_ch_T0000330;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000330:1;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9356495	9356572	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000330;gene_id=HG03009_ch_G0000122;Parent=HG03009_ch_T0000330;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000330:2;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9356495	9356572	.	+	0	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000330;gene_id=HG03009_ch_G0000122;Parent=HG03009_ch_T0000330;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000330:2;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9356573	9356700	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000330;gene_id=HG03009_ch_G0000122;Parent=HG03009_ch_T0000330;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000330:2;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9356701	9356812	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000330;gene_id=HG03009_ch_G0000122;Parent=HG03009_ch_T0000330;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000330:3;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9356701	9356812	.	+	0	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000330;gene_id=HG03009_ch_G0000122;Parent=HG03009_ch_T0000330;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000330:3;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9356813	9356913	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000330;gene_id=HG03009_ch_G0000122;Parent=HG03009_ch_T0000330;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000330:3;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9356914	9357059	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000330;gene_id=HG03009_ch_G0000122;Parent=HG03009_ch_T0000330;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000330:4;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9356914	9357059	.	+	2	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000330;gene_id=HG03009_ch_G0000122;Parent=HG03009_ch_T0000330;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000330:4;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9357060	9357165	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000330;gene_id=HG03009_ch_G0000122;Parent=HG03009_ch_T0000330;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000330:4;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9357166	9357247	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000330;gene_id=HG03009_ch_G0000122;Parent=HG03009_ch_T0000330;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000330:5;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9357166	9357247	.	+	0	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000330;gene_id=HG03009_ch_G0000122;Parent=HG03009_ch_T0000330;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000330:5;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9357248	9357941	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000330;gene_id=HG03009_ch_G0000122;Parent=HG03009_ch_T0000330;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000330:5;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9357942	9358152	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000330;gene_id=HG03009_ch_G0000122;Parent=HG03009_ch_T0000330;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000330:6;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9357942	9357964	.	+	2	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000330;gene_id=HG03009_ch_G0000122;Parent=HG03009_ch_T0000330;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000330:6;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	9357962	9357964	.	+	0	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000330;gene_id=HG03009_ch_G0000122;Parent=HG03009_ch_T0000330;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=stop_codon:HG03009_ch_T0000330;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	9367423	9371192	.	-	.	source_gene_common_name=FAM197Y3;source_gene=hg002_chrY_paternal_199;gene_id=HG03009_ch_G0000123;gene_biotype=lncRNA;gene_name=FAM197Y3;gene_sources=liftoff,transMap;ID=HG03009_ch_G0000123;Name=FAM197Y3
HG03009_chrY	CAT	transcript	9367423	9371192	1000	-	.	source_transcript=hg002_chrY_paternal_199.1;source_transcript_name=hg002_chrY_paternal_199.1;source_gene=hg002_chrY_paternal_199;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_199;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_199.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_199.1;transcript_score=246.89499999999998;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;AdditionalSources=liftoff;transcript_id=HG03009_ch_T0000331;gene_id=HG03009_ch_G0000123;Parent=HG03009_ch_G0000123;transcript_name=hg002_chrY_paternal_199.1;gene_name=FAM197Y3;ID=HG03009_ch_T0000331;Name=FAM197Y3
HG03009_chrY	CAT	exon	9367423	9367482	.	-	.	source_transcript=hg002_chrY_paternal_199.1;source_transcript_name=hg002_chrY_paternal_199.1;source_gene=hg002_chrY_paternal_199;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_199;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_199.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_199.1;transcript_score=246.89499999999998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;AdditionalSources=liftoff;transcript_id=HG03009_ch_T0000331;gene_id=HG03009_ch_G0000123;Parent=HG03009_ch_T0000331;transcript_name=hg002_chrY_paternal_199.1;gene_name=FAM197Y3;ID=exon:HG03009_ch_T0000331:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9367483	9371033	.	-	.	source_transcript=hg002_chrY_paternal_199.1;source_transcript_name=hg002_chrY_paternal_199.1;source_gene=hg002_chrY_paternal_199;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_199;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_199.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_199.1;transcript_score=246.89499999999998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;AdditionalSources=liftoff;transcript_id=HG03009_ch_T0000331;gene_id=HG03009_ch_G0000123;Parent=HG03009_ch_T0000331;transcript_name=hg002_chrY_paternal_199.1;gene_name=FAM197Y3;ID=intron:HG03009_ch_T0000331:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9371034	9371192	.	-	.	source_transcript=hg002_chrY_paternal_199.1;source_transcript_name=hg002_chrY_paternal_199.1;source_gene=hg002_chrY_paternal_199;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_199;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_199.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_199.1;transcript_score=246.89499999999998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;AdditionalSources=liftoff;transcript_id=HG03009_ch_T0000331;gene_id=HG03009_ch_G0000123;Parent=HG03009_ch_T0000331;transcript_name=hg002_chrY_paternal_199.1;gene_name=FAM197Y3;ID=exon:HG03009_ch_T0000331:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	9375635	9378431	.	+	.	source_gene_common_name=TSPY1;source_gene=hg002_chrY_paternal_158;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_200.1;gene_id=HG03009_ch_G0000124;gene_biotype=protein_coding;gene_name=TSPY1;gene_sources=liftoff;ID=HG03009_ch_G0000124;Name=TSPY1
HG03009_chrY	CAT	transcript	9375635	9378431	100	+	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_200.1;transcript_id=HG03009_ch_T0000332;gene_id=HG03009_ch_G0000124;Parent=HG03009_ch_G0000124;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=HG03009_ch_T0000332;Name=TSPY1
HG03009_chrY	CAT	exon	9375635	9376166	.	+	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_200.1;transcript_id=HG03009_ch_T0000332;gene_id=HG03009_ch_G0000124;Parent=HG03009_ch_T0000332;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000332:0;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9375681	9376166	.	+	0	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_200.1;transcript_id=HG03009_ch_T0000332;gene_id=HG03009_ch_G0000124;Parent=HG03009_ch_T0000332;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000332:0;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	9375681	9375683	.	+	0	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_200.1;transcript_id=HG03009_ch_T0000332;gene_id=HG03009_ch_G0000124;Parent=HG03009_ch_T0000332;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=start_codon:HG03009_ch_T0000332;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9376167	9376773	.	+	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_200.1;transcript_id=HG03009_ch_T0000332;gene_id=HG03009_ch_G0000124;Parent=HG03009_ch_T0000332;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000332:0;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9376774	9376851	.	+	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_200.1;transcript_id=HG03009_ch_T0000332;gene_id=HG03009_ch_G0000124;Parent=HG03009_ch_T0000332;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000332:1;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9376774	9376851	.	+	0	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_200.1;transcript_id=HG03009_ch_T0000332;gene_id=HG03009_ch_G0000124;Parent=HG03009_ch_T0000332;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000332:1;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9376852	9376979	.	+	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_200.1;transcript_id=HG03009_ch_T0000332;gene_id=HG03009_ch_G0000124;Parent=HG03009_ch_T0000332;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000332:1;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9376980	9377091	.	+	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_200.1;transcript_id=HG03009_ch_T0000332;gene_id=HG03009_ch_G0000124;Parent=HG03009_ch_T0000332;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000332:2;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9376980	9377091	.	+	0	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_200.1;transcript_id=HG03009_ch_T0000332;gene_id=HG03009_ch_G0000124;Parent=HG03009_ch_T0000332;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000332:2;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9377092	9377192	.	+	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_200.1;transcript_id=HG03009_ch_T0000332;gene_id=HG03009_ch_G0000124;Parent=HG03009_ch_T0000332;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000332:2;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9377193	9377338	.	+	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_200.1;transcript_id=HG03009_ch_T0000332;gene_id=HG03009_ch_G0000124;Parent=HG03009_ch_T0000332;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000332:3;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9377193	9377338	.	+	2	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_200.1;transcript_id=HG03009_ch_T0000332;gene_id=HG03009_ch_G0000124;Parent=HG03009_ch_T0000332;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000332:3;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9377339	9377444	.	+	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_200.1;transcript_id=HG03009_ch_T0000332;gene_id=HG03009_ch_G0000124;Parent=HG03009_ch_T0000332;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000332:3;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9377445	9377526	.	+	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_200.1;transcript_id=HG03009_ch_T0000332;gene_id=HG03009_ch_G0000124;Parent=HG03009_ch_T0000332;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000332:4;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9377445	9377526	.	+	0	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_200.1;transcript_id=HG03009_ch_T0000332;gene_id=HG03009_ch_G0000124;Parent=HG03009_ch_T0000332;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000332:4;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9377527	9378220	.	+	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_200.1;transcript_id=HG03009_ch_T0000332;gene_id=HG03009_ch_G0000124;Parent=HG03009_ch_T0000332;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000332:4;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9378221	9378431	.	+	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_200.1;transcript_id=HG03009_ch_T0000332;gene_id=HG03009_ch_G0000124;Parent=HG03009_ch_T0000332;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000332:5;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9378221	9378243	.	+	2	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_200.1;transcript_id=HG03009_ch_T0000332;gene_id=HG03009_ch_G0000124;Parent=HG03009_ch_T0000332;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000332:5;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	9378241	9378243	.	+	0	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_200.1;transcript_id=HG03009_ch_T0000332;gene_id=HG03009_ch_G0000124;Parent=HG03009_ch_T0000332;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=stop_codon:HG03009_ch_T0000332;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	9375635	9378431	100	+	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_200.2;transcript_id=HG03009_ch_T0000333;gene_id=HG03009_ch_G0000124;Parent=HG03009_ch_G0000124;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=HG03009_ch_T0000333;Name=TSPY1
HG03009_chrY	CAT	exon	9375635	9376166	.	+	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_200.2;transcript_id=HG03009_ch_T0000333;gene_id=HG03009_ch_G0000124;Parent=HG03009_ch_T0000333;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000333:0;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9375681	9376166	.	+	0	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_200.2;transcript_id=HG03009_ch_T0000333;gene_id=HG03009_ch_G0000124;Parent=HG03009_ch_T0000333;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000333:0;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	9375681	9375683	.	+	0	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_200.2;transcript_id=HG03009_ch_T0000333;gene_id=HG03009_ch_G0000124;Parent=HG03009_ch_T0000333;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=start_codon:HG03009_ch_T0000333;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9376167	9376773	.	+	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_200.2;transcript_id=HG03009_ch_T0000333;gene_id=HG03009_ch_G0000124;Parent=HG03009_ch_T0000333;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000333:0;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9376774	9376851	.	+	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_200.2;transcript_id=HG03009_ch_T0000333;gene_id=HG03009_ch_G0000124;Parent=HG03009_ch_T0000333;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000333:1;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9376774	9376851	.	+	0	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_200.2;transcript_id=HG03009_ch_T0000333;gene_id=HG03009_ch_G0000124;Parent=HG03009_ch_T0000333;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000333:1;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9376852	9376979	.	+	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_200.2;transcript_id=HG03009_ch_T0000333;gene_id=HG03009_ch_G0000124;Parent=HG03009_ch_T0000333;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000333:1;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9376980	9377091	.	+	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_200.2;transcript_id=HG03009_ch_T0000333;gene_id=HG03009_ch_G0000124;Parent=HG03009_ch_T0000333;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000333:2;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9376980	9377091	.	+	0	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_200.2;transcript_id=HG03009_ch_T0000333;gene_id=HG03009_ch_G0000124;Parent=HG03009_ch_T0000333;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000333:2;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9377092	9377192	.	+	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_200.2;transcript_id=HG03009_ch_T0000333;gene_id=HG03009_ch_G0000124;Parent=HG03009_ch_T0000333;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000333:2;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9377193	9377338	.	+	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_200.2;transcript_id=HG03009_ch_T0000333;gene_id=HG03009_ch_G0000124;Parent=HG03009_ch_T0000333;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000333:3;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9377193	9377338	.	+	2	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_200.2;transcript_id=HG03009_ch_T0000333;gene_id=HG03009_ch_G0000124;Parent=HG03009_ch_T0000333;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000333:3;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9377339	9377433	.	+	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_200.2;transcript_id=HG03009_ch_T0000333;gene_id=HG03009_ch_G0000124;Parent=HG03009_ch_T0000333;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000333:3;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9377434	9377526	.	+	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_200.2;transcript_id=HG03009_ch_T0000333;gene_id=HG03009_ch_G0000124;Parent=HG03009_ch_T0000333;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000333:4;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9377434	9377496	.	+	0	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_200.2;transcript_id=HG03009_ch_T0000333;gene_id=HG03009_ch_G0000124;Parent=HG03009_ch_T0000333;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000333:4;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	9377494	9377496	.	+	0	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_200.2;transcript_id=HG03009_ch_T0000333;gene_id=HG03009_ch_G0000124;Parent=HG03009_ch_T0000333;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=stop_codon:HG03009_ch_T0000333;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9377527	9378220	.	+	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_200.2;transcript_id=HG03009_ch_T0000333;gene_id=HG03009_ch_G0000124;Parent=HG03009_ch_T0000333;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000333:4;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9378221	9378431	.	+	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_200.2;transcript_id=HG03009_ch_T0000333;gene_id=HG03009_ch_G0000124;Parent=HG03009_ch_T0000333;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000333:5;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	9375635	9378431	100	+	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_200.3;transcript_id=HG03009_ch_T0000334;gene_id=HG03009_ch_G0000124;Parent=HG03009_ch_G0000124;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=HG03009_ch_T0000334;Name=TSPY1
HG03009_chrY	CAT	exon	9375635	9376166	.	+	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_200.3;transcript_id=HG03009_ch_T0000334;gene_id=HG03009_ch_G0000124;Parent=HG03009_ch_T0000334;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000334:0;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9375681	9376166	.	+	0	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_200.3;transcript_id=HG03009_ch_T0000334;gene_id=HG03009_ch_G0000124;Parent=HG03009_ch_T0000334;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000334:0;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	9375681	9375683	.	+	0	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_200.3;transcript_id=HG03009_ch_T0000334;gene_id=HG03009_ch_G0000124;Parent=HG03009_ch_T0000334;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=start_codon:HG03009_ch_T0000334;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9376167	9376773	.	+	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_200.3;transcript_id=HG03009_ch_T0000334;gene_id=HG03009_ch_G0000124;Parent=HG03009_ch_T0000334;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000334:0;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9376774	9376851	.	+	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_200.3;transcript_id=HG03009_ch_T0000334;gene_id=HG03009_ch_G0000124;Parent=HG03009_ch_T0000334;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000334:1;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9376774	9376851	.	+	0	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_200.3;transcript_id=HG03009_ch_T0000334;gene_id=HG03009_ch_G0000124;Parent=HG03009_ch_T0000334;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000334:1;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9376852	9376979	.	+	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_200.3;transcript_id=HG03009_ch_T0000334;gene_id=HG03009_ch_G0000124;Parent=HG03009_ch_T0000334;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000334:1;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9376980	9377091	.	+	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_200.3;transcript_id=HG03009_ch_T0000334;gene_id=HG03009_ch_G0000124;Parent=HG03009_ch_T0000334;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000334:2;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9376980	9377091	.	+	0	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_200.3;transcript_id=HG03009_ch_T0000334;gene_id=HG03009_ch_G0000124;Parent=HG03009_ch_T0000334;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000334:2;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9377092	9377199	.	+	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_200.3;transcript_id=HG03009_ch_T0000334;gene_id=HG03009_ch_G0000124;Parent=HG03009_ch_T0000334;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000334:2;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9377200	9377338	.	+	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_200.3;transcript_id=HG03009_ch_T0000334;gene_id=HG03009_ch_G0000124;Parent=HG03009_ch_T0000334;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000334:3;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9377200	9377338	.	+	2	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_200.3;transcript_id=HG03009_ch_T0000334;gene_id=HG03009_ch_G0000124;Parent=HG03009_ch_T0000334;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000334:3;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9377339	9377444	.	+	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_200.3;transcript_id=HG03009_ch_T0000334;gene_id=HG03009_ch_G0000124;Parent=HG03009_ch_T0000334;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000334:3;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9377445	9377526	.	+	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_200.3;transcript_id=HG03009_ch_T0000334;gene_id=HG03009_ch_G0000124;Parent=HG03009_ch_T0000334;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000334:4;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9377445	9377496	.	+	1	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_200.3;transcript_id=HG03009_ch_T0000334;gene_id=HG03009_ch_G0000124;Parent=HG03009_ch_T0000334;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000334:4;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	9377494	9377496	.	+	0	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_200.3;transcript_id=HG03009_ch_T0000334;gene_id=HG03009_ch_G0000124;Parent=HG03009_ch_T0000334;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=stop_codon:HG03009_ch_T0000334;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9377527	9378220	.	+	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_200.3;transcript_id=HG03009_ch_T0000334;gene_id=HG03009_ch_G0000124;Parent=HG03009_ch_T0000334;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000334:4;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9378221	9378431	.	+	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_200.3;transcript_id=HG03009_ch_T0000334;gene_id=HG03009_ch_G0000124;Parent=HG03009_ch_T0000334;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000334:5;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	9375635	9378431	100	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03009_ch_T0000335;gene_id=HG03009_ch_G0000124;Parent=HG03009_ch_G0000124;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=HG03009_ch_T0000335;Name=TSPY1
HG03009_chrY	CAT	exon	9375635	9375767	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03009_ch_T0000335;gene_id=HG03009_ch_G0000124;Parent=HG03009_ch_T0000335;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000335:0;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9375681	9375767	.	+	0	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03009_ch_T0000335;gene_id=HG03009_ch_G0000124;Parent=HG03009_ch_T0000335;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000335:0;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	9375681	9375683	.	+	0	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03009_ch_T0000335;gene_id=HG03009_ch_G0000124;Parent=HG03009_ch_T0000335;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=start_codon:HG03009_ch_T0000335;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9375768	9376028	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03009_ch_T0000335;gene_id=HG03009_ch_G0000124;Parent=HG03009_ch_T0000335;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000335:0;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9376029	9376166	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03009_ch_T0000335;gene_id=HG03009_ch_G0000124;Parent=HG03009_ch_T0000335;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000335:1;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9376029	9376166	.	+	0	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03009_ch_T0000335;gene_id=HG03009_ch_G0000124;Parent=HG03009_ch_T0000335;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000335:1;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9376167	9376773	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03009_ch_T0000335;gene_id=HG03009_ch_G0000124;Parent=HG03009_ch_T0000335;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000335:1;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9376774	9376851	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03009_ch_T0000335;gene_id=HG03009_ch_G0000124;Parent=HG03009_ch_T0000335;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000335:2;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9376774	9376851	.	+	0	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03009_ch_T0000335;gene_id=HG03009_ch_G0000124;Parent=HG03009_ch_T0000335;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000335:2;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9376852	9376979	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03009_ch_T0000335;gene_id=HG03009_ch_G0000124;Parent=HG03009_ch_T0000335;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000335:2;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9376980	9377091	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03009_ch_T0000335;gene_id=HG03009_ch_G0000124;Parent=HG03009_ch_T0000335;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000335:3;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9376980	9377091	.	+	0	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03009_ch_T0000335;gene_id=HG03009_ch_G0000124;Parent=HG03009_ch_T0000335;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000335:3;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9377092	9377192	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03009_ch_T0000335;gene_id=HG03009_ch_G0000124;Parent=HG03009_ch_T0000335;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000335:3;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9377193	9377338	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03009_ch_T0000335;gene_id=HG03009_ch_G0000124;Parent=HG03009_ch_T0000335;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000335:4;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9377193	9377338	.	+	2	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03009_ch_T0000335;gene_id=HG03009_ch_G0000124;Parent=HG03009_ch_T0000335;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000335:4;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9377339	9377444	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03009_ch_T0000335;gene_id=HG03009_ch_G0000124;Parent=HG03009_ch_T0000335;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000335:4;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9377445	9377526	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03009_ch_T0000335;gene_id=HG03009_ch_G0000124;Parent=HG03009_ch_T0000335;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000335:5;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9377445	9377526	.	+	0	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03009_ch_T0000335;gene_id=HG03009_ch_G0000124;Parent=HG03009_ch_T0000335;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000335:5;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9377527	9378220	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03009_ch_T0000335;gene_id=HG03009_ch_G0000124;Parent=HG03009_ch_T0000335;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000335:5;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9378221	9378431	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03009_ch_T0000335;gene_id=HG03009_ch_G0000124;Parent=HG03009_ch_T0000335;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000335:6;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9378221	9378243	.	+	2	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03009_ch_T0000335;gene_id=HG03009_ch_G0000124;Parent=HG03009_ch_T0000335;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000335:6;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	9378241	9378243	.	+	0	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03009_ch_T0000335;gene_id=HG03009_ch_G0000124;Parent=HG03009_ch_T0000335;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=stop_codon:HG03009_ch_T0000335;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	9375635	9378431	1000	+	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.4,hg002_chrY_paternal_200.4;transcript_id=HG03009_ch_T0000336;gene_id=HG03009_ch_G0000124;Parent=HG03009_ch_G0000124;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=HG03009_ch_T0000336;Name=TSPY1
HG03009_chrY	CAT	exon	9375635	9376166	.	+	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.4,hg002_chrY_paternal_200.4;transcript_id=HG03009_ch_T0000336;gene_id=HG03009_ch_G0000124;Parent=HG03009_ch_T0000336;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=exon:HG03009_ch_T0000336:0;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9376167	9376773	.	+	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.4,hg002_chrY_paternal_200.4;transcript_id=HG03009_ch_T0000336;gene_id=HG03009_ch_G0000124;Parent=HG03009_ch_T0000336;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=intron:HG03009_ch_T0000336:0;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9376774	9376851	.	+	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.4,hg002_chrY_paternal_200.4;transcript_id=HG03009_ch_T0000336;gene_id=HG03009_ch_G0000124;Parent=HG03009_ch_T0000336;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=exon:HG03009_ch_T0000336:1;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9376852	9376979	.	+	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.4,hg002_chrY_paternal_200.4;transcript_id=HG03009_ch_T0000336;gene_id=HG03009_ch_G0000124;Parent=HG03009_ch_T0000336;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=intron:HG03009_ch_T0000336:1;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9376980	9377091	.	+	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.4,hg002_chrY_paternal_200.4;transcript_id=HG03009_ch_T0000336;gene_id=HG03009_ch_G0000124;Parent=HG03009_ch_T0000336;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=exon:HG03009_ch_T0000336:2;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9377092	9377199	.	+	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.4,hg002_chrY_paternal_200.4;transcript_id=HG03009_ch_T0000336;gene_id=HG03009_ch_G0000124;Parent=HG03009_ch_T0000336;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=intron:HG03009_ch_T0000336:2;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9377200	9377338	.	+	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.4,hg002_chrY_paternal_200.4;transcript_id=HG03009_ch_T0000336;gene_id=HG03009_ch_G0000124;Parent=HG03009_ch_T0000336;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=exon:HG03009_ch_T0000336:3;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9377339	9377433	.	+	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.4,hg002_chrY_paternal_200.4;transcript_id=HG03009_ch_T0000336;gene_id=HG03009_ch_G0000124;Parent=HG03009_ch_T0000336;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=intron:HG03009_ch_T0000336:3;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9377434	9377526	.	+	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.4,hg002_chrY_paternal_200.4;transcript_id=HG03009_ch_T0000336;gene_id=HG03009_ch_G0000124;Parent=HG03009_ch_T0000336;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=exon:HG03009_ch_T0000336:4;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9377527	9378220	.	+	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.4,hg002_chrY_paternal_200.4;transcript_id=HG03009_ch_T0000336;gene_id=HG03009_ch_G0000124;Parent=HG03009_ch_T0000336;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=intron:HG03009_ch_T0000336:4;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9378221	9378431	.	+	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.4,hg002_chrY_paternal_200.4;transcript_id=HG03009_ch_T0000336;gene_id=HG03009_ch_G0000124;Parent=HG03009_ch_T0000336;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=exon:HG03009_ch_T0000336:5;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	9387702	9393311	.	-	.	source_gene_common_name=FAM197Y5;source_gene=hg002_chrY_paternal_205;alternative_source_transcripts=hg002_chrY_paternal_205.1,hg002_chrY_paternal_203.1;gene_id=HG03009_ch_G0000125;gene_biotype=lncRNA;gene_name=FAM197Y5;gene_sources=liftoff;ID=HG03009_ch_G0000125;Name=FAM197Y5
HG03009_chrY	CAT	transcript	9387702	9393311	1000	-	.	source_transcript=hg002_chrY_paternal_205.1;source_transcript_name=hg002_chrY_paternal_205.1;source_gene=hg002_chrY_paternal_205;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_205;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_205.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_205.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;alternative_source_transcripts=hg002_chrY_paternal_205.1,hg002_chrY_paternal_203.1;transcript_id=HG03009_ch_T0000337;gene_id=HG03009_ch_G0000125;Parent=HG03009_ch_G0000125;transcript_name=hg002_chrY_paternal_205.1;gene_name=FAM197Y5;ID=HG03009_ch_T0000337;Name=FAM197Y5
HG03009_chrY	CAT	exon	9387702	9387761	.	-	.	source_transcript=hg002_chrY_paternal_205.1;source_transcript_name=hg002_chrY_paternal_205.1;source_gene=hg002_chrY_paternal_205;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_205;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_205.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_205.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;alternative_source_transcripts=hg002_chrY_paternal_205.1,hg002_chrY_paternal_203.1;transcript_id=HG03009_ch_T0000337;gene_id=HG03009_ch_G0000125;Parent=HG03009_ch_T0000337;transcript_name=hg002_chrY_paternal_205.1;gene_name=FAM197Y5;ID=exon:HG03009_ch_T0000337:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9387762	9391316	.	-	.	source_transcript=hg002_chrY_paternal_205.1;source_transcript_name=hg002_chrY_paternal_205.1;source_gene=hg002_chrY_paternal_205;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_205;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_205.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_205.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;alternative_source_transcripts=hg002_chrY_paternal_205.1,hg002_chrY_paternal_203.1;transcript_id=HG03009_ch_T0000337;gene_id=HG03009_ch_G0000125;Parent=HG03009_ch_T0000337;transcript_name=hg002_chrY_paternal_205.1;gene_name=FAM197Y5;ID=intron:HG03009_ch_T0000337:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9391317	9391475	.	-	.	source_transcript=hg002_chrY_paternal_205.1;source_transcript_name=hg002_chrY_paternal_205.1;source_gene=hg002_chrY_paternal_205;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_205;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_205.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_205.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;alternative_source_transcripts=hg002_chrY_paternal_205.1,hg002_chrY_paternal_203.1;transcript_id=HG03009_ch_T0000337;gene_id=HG03009_ch_G0000125;Parent=HG03009_ch_T0000337;transcript_name=hg002_chrY_paternal_205.1;gene_name=FAM197Y5;ID=exon:HG03009_ch_T0000337:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9391476	9392977	.	-	.	source_transcript=hg002_chrY_paternal_205.1;source_transcript_name=hg002_chrY_paternal_205.1;source_gene=hg002_chrY_paternal_205;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_205;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_205.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_205.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;alternative_source_transcripts=hg002_chrY_paternal_205.1,hg002_chrY_paternal_203.1;transcript_id=HG03009_ch_T0000337;gene_id=HG03009_ch_G0000125;Parent=HG03009_ch_T0000337;transcript_name=hg002_chrY_paternal_205.1;gene_name=FAM197Y5;ID=intron:HG03009_ch_T0000337:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9392978	9393123	.	-	.	source_transcript=hg002_chrY_paternal_205.1;source_transcript_name=hg002_chrY_paternal_205.1;source_gene=hg002_chrY_paternal_205;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_205;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_205.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_205.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;alternative_source_transcripts=hg002_chrY_paternal_205.1,hg002_chrY_paternal_203.1;transcript_id=HG03009_ch_T0000337;gene_id=HG03009_ch_G0000125;Parent=HG03009_ch_T0000337;transcript_name=hg002_chrY_paternal_205.1;gene_name=FAM197Y5;ID=exon:HG03009_ch_T0000337:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9393124	9393209	.	-	.	source_transcript=hg002_chrY_paternal_205.1;source_transcript_name=hg002_chrY_paternal_205.1;source_gene=hg002_chrY_paternal_205;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_205;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_205.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_205.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;alternative_source_transcripts=hg002_chrY_paternal_205.1,hg002_chrY_paternal_203.1;transcript_id=HG03009_ch_T0000337;gene_id=HG03009_ch_G0000125;Parent=HG03009_ch_T0000337;transcript_name=hg002_chrY_paternal_205.1;gene_name=FAM197Y5;ID=intron:HG03009_ch_T0000337:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9393210	9393311	.	-	.	source_transcript=hg002_chrY_paternal_205.1;source_transcript_name=hg002_chrY_paternal_205.1;source_gene=hg002_chrY_paternal_205;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_205;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_205.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_205.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;alternative_source_transcripts=hg002_chrY_paternal_205.1,hg002_chrY_paternal_203.1;transcript_id=HG03009_ch_T0000337;gene_id=HG03009_ch_G0000125;Parent=HG03009_ch_T0000337;transcript_name=hg002_chrY_paternal_205.1;gene_name=FAM197Y5;ID=exon:HG03009_ch_T0000337:3;Name=FAM197Y5;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	9395924	9398721	.	+	.	source_gene_common_name=TSPY10;source_gene=hg002_chrY_paternal_234;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_204.1;gene_id=HG03009_ch_G0000126;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff;ID=HG03009_ch_G0000126;Name=TSPY10
HG03009_chrY	CAT	transcript	9395924	9398721	100	+	.	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_204.1;transcript_id=HG03009_ch_T0000338;gene_id=HG03009_ch_G0000126;Parent=HG03009_ch_G0000126;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=HG03009_ch_T0000338;Name=TSPY10
HG03009_chrY	CAT	exon	9395924	9396455	.	+	.	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_204.1;transcript_id=HG03009_ch_T0000338;gene_id=HG03009_ch_G0000126;Parent=HG03009_ch_T0000338;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000338:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9395970	9396455	.	+	0	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_204.1;transcript_id=HG03009_ch_T0000338;gene_id=HG03009_ch_G0000126;Parent=HG03009_ch_T0000338;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000338:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	9395970	9395972	.	+	0	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_204.1;transcript_id=HG03009_ch_T0000338;gene_id=HG03009_ch_G0000126;Parent=HG03009_ch_T0000338;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=start_codon:HG03009_ch_T0000338;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9396456	9397062	.	+	.	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_204.1;transcript_id=HG03009_ch_T0000338;gene_id=HG03009_ch_G0000126;Parent=HG03009_ch_T0000338;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000338:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9397063	9397140	.	+	.	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_204.1;transcript_id=HG03009_ch_T0000338;gene_id=HG03009_ch_G0000126;Parent=HG03009_ch_T0000338;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000338:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9397063	9397140	.	+	0	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_204.1;transcript_id=HG03009_ch_T0000338;gene_id=HG03009_ch_G0000126;Parent=HG03009_ch_T0000338;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000338:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9397141	9397268	.	+	.	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_204.1;transcript_id=HG03009_ch_T0000338;gene_id=HG03009_ch_G0000126;Parent=HG03009_ch_T0000338;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000338:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9397269	9397380	.	+	.	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_204.1;transcript_id=HG03009_ch_T0000338;gene_id=HG03009_ch_G0000126;Parent=HG03009_ch_T0000338;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000338:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9397269	9397380	.	+	0	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_204.1;transcript_id=HG03009_ch_T0000338;gene_id=HG03009_ch_G0000126;Parent=HG03009_ch_T0000338;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000338:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9397381	9397481	.	+	.	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_204.1;transcript_id=HG03009_ch_T0000338;gene_id=HG03009_ch_G0000126;Parent=HG03009_ch_T0000338;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000338:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9397482	9397627	.	+	.	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_204.1;transcript_id=HG03009_ch_T0000338;gene_id=HG03009_ch_G0000126;Parent=HG03009_ch_T0000338;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000338:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9397482	9397627	.	+	2	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_204.1;transcript_id=HG03009_ch_T0000338;gene_id=HG03009_ch_G0000126;Parent=HG03009_ch_T0000338;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000338:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9397628	9397733	.	+	.	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_204.1;transcript_id=HG03009_ch_T0000338;gene_id=HG03009_ch_G0000126;Parent=HG03009_ch_T0000338;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000338:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9397734	9397815	.	+	.	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_204.1;transcript_id=HG03009_ch_T0000338;gene_id=HG03009_ch_G0000126;Parent=HG03009_ch_T0000338;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000338:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9397734	9397815	.	+	0	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_204.1;transcript_id=HG03009_ch_T0000338;gene_id=HG03009_ch_G0000126;Parent=HG03009_ch_T0000338;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000338:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9397816	9398509	.	+	.	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_204.1;transcript_id=HG03009_ch_T0000338;gene_id=HG03009_ch_G0000126;Parent=HG03009_ch_T0000338;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000338:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9398510	9398721	.	+	.	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_204.1;transcript_id=HG03009_ch_T0000338;gene_id=HG03009_ch_G0000126;Parent=HG03009_ch_T0000338;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000338:5;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9398510	9398532	.	+	2	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_204.1;transcript_id=HG03009_ch_T0000338;gene_id=HG03009_ch_G0000126;Parent=HG03009_ch_T0000338;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000338:5;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	9398530	9398532	.	+	0	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_204.1;transcript_id=HG03009_ch_T0000338;gene_id=HG03009_ch_G0000126;Parent=HG03009_ch_T0000338;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=stop_codon:HG03009_ch_T0000338;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	9395924	9398721	100	+	.	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_204.2;transcript_id=HG03009_ch_T0000339;gene_id=HG03009_ch_G0000126;Parent=HG03009_ch_G0000126;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=HG03009_ch_T0000339;Name=TSPY10
HG03009_chrY	CAT	exon	9395924	9396455	.	+	.	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_204.2;transcript_id=HG03009_ch_T0000339;gene_id=HG03009_ch_G0000126;Parent=HG03009_ch_T0000339;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000339:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9395970	9396455	.	+	0	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_204.2;transcript_id=HG03009_ch_T0000339;gene_id=HG03009_ch_G0000126;Parent=HG03009_ch_T0000339;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000339:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	9395970	9395972	.	+	0	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_204.2;transcript_id=HG03009_ch_T0000339;gene_id=HG03009_ch_G0000126;Parent=HG03009_ch_T0000339;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=start_codon:HG03009_ch_T0000339;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9396456	9397062	.	+	.	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_204.2;transcript_id=HG03009_ch_T0000339;gene_id=HG03009_ch_G0000126;Parent=HG03009_ch_T0000339;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000339:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9397063	9397140	.	+	.	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_204.2;transcript_id=HG03009_ch_T0000339;gene_id=HG03009_ch_G0000126;Parent=HG03009_ch_T0000339;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000339:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9397063	9397140	.	+	0	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_204.2;transcript_id=HG03009_ch_T0000339;gene_id=HG03009_ch_G0000126;Parent=HG03009_ch_T0000339;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000339:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9397141	9397268	.	+	.	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_204.2;transcript_id=HG03009_ch_T0000339;gene_id=HG03009_ch_G0000126;Parent=HG03009_ch_T0000339;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000339:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9397269	9397380	.	+	.	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_204.2;transcript_id=HG03009_ch_T0000339;gene_id=HG03009_ch_G0000126;Parent=HG03009_ch_T0000339;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000339:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9397269	9397380	.	+	0	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_204.2;transcript_id=HG03009_ch_T0000339;gene_id=HG03009_ch_G0000126;Parent=HG03009_ch_T0000339;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000339:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9397381	9397481	.	+	.	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_204.2;transcript_id=HG03009_ch_T0000339;gene_id=HG03009_ch_G0000126;Parent=HG03009_ch_T0000339;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000339:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9397482	9397627	.	+	.	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_204.2;transcript_id=HG03009_ch_T0000339;gene_id=HG03009_ch_G0000126;Parent=HG03009_ch_T0000339;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000339:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9397482	9397627	.	+	2	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_204.2;transcript_id=HG03009_ch_T0000339;gene_id=HG03009_ch_G0000126;Parent=HG03009_ch_T0000339;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000339:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9397628	9397722	.	+	.	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_204.2;transcript_id=HG03009_ch_T0000339;gene_id=HG03009_ch_G0000126;Parent=HG03009_ch_T0000339;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000339:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9397723	9397815	.	+	.	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_204.2;transcript_id=HG03009_ch_T0000339;gene_id=HG03009_ch_G0000126;Parent=HG03009_ch_T0000339;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000339:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9397723	9397785	.	+	0	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_204.2;transcript_id=HG03009_ch_T0000339;gene_id=HG03009_ch_G0000126;Parent=HG03009_ch_T0000339;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000339:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	9397783	9397785	.	+	0	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_204.2;transcript_id=HG03009_ch_T0000339;gene_id=HG03009_ch_G0000126;Parent=HG03009_ch_T0000339;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=stop_codon:HG03009_ch_T0000339;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9397816	9398509	.	+	.	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_204.2;transcript_id=HG03009_ch_T0000339;gene_id=HG03009_ch_G0000126;Parent=HG03009_ch_T0000339;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000339:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9398510	9398721	.	+	.	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_204.2;transcript_id=HG03009_ch_T0000339;gene_id=HG03009_ch_G0000126;Parent=HG03009_ch_T0000339;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000339:5;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	9395924	9398721	100	+	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_204.3;transcript_id=HG03009_ch_T0000340;gene_id=HG03009_ch_G0000126;Parent=HG03009_ch_G0000126;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=HG03009_ch_T0000340;Name=TSPY10
HG03009_chrY	CAT	exon	9395924	9396455	.	+	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_204.3;transcript_id=HG03009_ch_T0000340;gene_id=HG03009_ch_G0000126;Parent=HG03009_ch_T0000340;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000340:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9395970	9396455	.	+	0	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_204.3;transcript_id=HG03009_ch_T0000340;gene_id=HG03009_ch_G0000126;Parent=HG03009_ch_T0000340;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000340:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	9395970	9395972	.	+	0	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_204.3;transcript_id=HG03009_ch_T0000340;gene_id=HG03009_ch_G0000126;Parent=HG03009_ch_T0000340;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=start_codon:HG03009_ch_T0000340;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9396456	9397062	.	+	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_204.3;transcript_id=HG03009_ch_T0000340;gene_id=HG03009_ch_G0000126;Parent=HG03009_ch_T0000340;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000340:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9397063	9397140	.	+	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_204.3;transcript_id=HG03009_ch_T0000340;gene_id=HG03009_ch_G0000126;Parent=HG03009_ch_T0000340;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000340:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9397063	9397140	.	+	0	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_204.3;transcript_id=HG03009_ch_T0000340;gene_id=HG03009_ch_G0000126;Parent=HG03009_ch_T0000340;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000340:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9397141	9397268	.	+	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_204.3;transcript_id=HG03009_ch_T0000340;gene_id=HG03009_ch_G0000126;Parent=HG03009_ch_T0000340;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000340:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9397269	9397380	.	+	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_204.3;transcript_id=HG03009_ch_T0000340;gene_id=HG03009_ch_G0000126;Parent=HG03009_ch_T0000340;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000340:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9397269	9397380	.	+	0	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_204.3;transcript_id=HG03009_ch_T0000340;gene_id=HG03009_ch_G0000126;Parent=HG03009_ch_T0000340;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000340:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9397381	9397488	.	+	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_204.3;transcript_id=HG03009_ch_T0000340;gene_id=HG03009_ch_G0000126;Parent=HG03009_ch_T0000340;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000340:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9397489	9397627	.	+	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_204.3;transcript_id=HG03009_ch_T0000340;gene_id=HG03009_ch_G0000126;Parent=HG03009_ch_T0000340;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000340:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9397489	9397627	.	+	2	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_204.3;transcript_id=HG03009_ch_T0000340;gene_id=HG03009_ch_G0000126;Parent=HG03009_ch_T0000340;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000340:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9397628	9397733	.	+	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_204.3;transcript_id=HG03009_ch_T0000340;gene_id=HG03009_ch_G0000126;Parent=HG03009_ch_T0000340;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000340:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9397734	9397815	.	+	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_204.3;transcript_id=HG03009_ch_T0000340;gene_id=HG03009_ch_G0000126;Parent=HG03009_ch_T0000340;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000340:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9397734	9397785	.	+	1	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_204.3;transcript_id=HG03009_ch_T0000340;gene_id=HG03009_ch_G0000126;Parent=HG03009_ch_T0000340;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000340:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	9397783	9397785	.	+	0	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_204.3;transcript_id=HG03009_ch_T0000340;gene_id=HG03009_ch_G0000126;Parent=HG03009_ch_T0000340;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=stop_codon:HG03009_ch_T0000340;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9397816	9398509	.	+	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_204.3;transcript_id=HG03009_ch_T0000340;gene_id=HG03009_ch_G0000126;Parent=HG03009_ch_T0000340;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000340:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9398510	9398721	.	+	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_204.3;transcript_id=HG03009_ch_T0000340;gene_id=HG03009_ch_G0000126;Parent=HG03009_ch_T0000340;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000340:5;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	9395924	9398721	1000	+	.	source_transcript=hg002_chrY_paternal_234.4;source_transcript_name=hg002_chrY_paternal_234.1;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_234.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.4,hg002_chrY_paternal_204.4;transcript_id=HG03009_ch_T0000341;gene_id=HG03009_ch_G0000126;Parent=HG03009_ch_G0000126;transcript_name=hg002_chrY_paternal_234.1;gene_name=TSPY10;ID=HG03009_ch_T0000341;Name=TSPY10
HG03009_chrY	CAT	exon	9395924	9396455	.	+	.	source_transcript=hg002_chrY_paternal_234.4;source_transcript_name=hg002_chrY_paternal_234.1;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_234.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.4,hg002_chrY_paternal_204.4;transcript_id=HG03009_ch_T0000341;gene_id=HG03009_ch_G0000126;Parent=HG03009_ch_T0000341;transcript_name=hg002_chrY_paternal_234.1;gene_name=TSPY10;ID=exon:HG03009_ch_T0000341:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9396456	9397062	.	+	.	source_transcript=hg002_chrY_paternal_234.4;source_transcript_name=hg002_chrY_paternal_234.1;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_234.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.4,hg002_chrY_paternal_204.4;transcript_id=HG03009_ch_T0000341;gene_id=HG03009_ch_G0000126;Parent=HG03009_ch_T0000341;transcript_name=hg002_chrY_paternal_234.1;gene_name=TSPY10;ID=intron:HG03009_ch_T0000341:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9397063	9397140	.	+	.	source_transcript=hg002_chrY_paternal_234.4;source_transcript_name=hg002_chrY_paternal_234.1;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_234.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.4,hg002_chrY_paternal_204.4;transcript_id=HG03009_ch_T0000341;gene_id=HG03009_ch_G0000126;Parent=HG03009_ch_T0000341;transcript_name=hg002_chrY_paternal_234.1;gene_name=TSPY10;ID=exon:HG03009_ch_T0000341:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9397141	9397268	.	+	.	source_transcript=hg002_chrY_paternal_234.4;source_transcript_name=hg002_chrY_paternal_234.1;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_234.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.4,hg002_chrY_paternal_204.4;transcript_id=HG03009_ch_T0000341;gene_id=HG03009_ch_G0000126;Parent=HG03009_ch_T0000341;transcript_name=hg002_chrY_paternal_234.1;gene_name=TSPY10;ID=intron:HG03009_ch_T0000341:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9397269	9397380	.	+	.	source_transcript=hg002_chrY_paternal_234.4;source_transcript_name=hg002_chrY_paternal_234.1;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_234.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.4,hg002_chrY_paternal_204.4;transcript_id=HG03009_ch_T0000341;gene_id=HG03009_ch_G0000126;Parent=HG03009_ch_T0000341;transcript_name=hg002_chrY_paternal_234.1;gene_name=TSPY10;ID=exon:HG03009_ch_T0000341:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9397381	9397488	.	+	.	source_transcript=hg002_chrY_paternal_234.4;source_transcript_name=hg002_chrY_paternal_234.1;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_234.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.4,hg002_chrY_paternal_204.4;transcript_id=HG03009_ch_T0000341;gene_id=HG03009_ch_G0000126;Parent=HG03009_ch_T0000341;transcript_name=hg002_chrY_paternal_234.1;gene_name=TSPY10;ID=intron:HG03009_ch_T0000341:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9397489	9397627	.	+	.	source_transcript=hg002_chrY_paternal_234.4;source_transcript_name=hg002_chrY_paternal_234.1;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_234.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.4,hg002_chrY_paternal_204.4;transcript_id=HG03009_ch_T0000341;gene_id=HG03009_ch_G0000126;Parent=HG03009_ch_T0000341;transcript_name=hg002_chrY_paternal_234.1;gene_name=TSPY10;ID=exon:HG03009_ch_T0000341:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9397628	9397722	.	+	.	source_transcript=hg002_chrY_paternal_234.4;source_transcript_name=hg002_chrY_paternal_234.1;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_234.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.4,hg002_chrY_paternal_204.4;transcript_id=HG03009_ch_T0000341;gene_id=HG03009_ch_G0000126;Parent=HG03009_ch_T0000341;transcript_name=hg002_chrY_paternal_234.1;gene_name=TSPY10;ID=intron:HG03009_ch_T0000341:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9397723	9397815	.	+	.	source_transcript=hg002_chrY_paternal_234.4;source_transcript_name=hg002_chrY_paternal_234.1;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_234.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.4,hg002_chrY_paternal_204.4;transcript_id=HG03009_ch_T0000341;gene_id=HG03009_ch_G0000126;Parent=HG03009_ch_T0000341;transcript_name=hg002_chrY_paternal_234.1;gene_name=TSPY10;ID=exon:HG03009_ch_T0000341:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9397816	9398509	.	+	.	source_transcript=hg002_chrY_paternal_234.4;source_transcript_name=hg002_chrY_paternal_234.1;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_234.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.4,hg002_chrY_paternal_204.4;transcript_id=HG03009_ch_T0000341;gene_id=HG03009_ch_G0000126;Parent=HG03009_ch_T0000341;transcript_name=hg002_chrY_paternal_234.1;gene_name=TSPY10;ID=intron:HG03009_ch_T0000341:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9398510	9398721	.	+	.	source_transcript=hg002_chrY_paternal_234.4;source_transcript_name=hg002_chrY_paternal_234.1;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_234.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.4,hg002_chrY_paternal_204.4;transcript_id=HG03009_ch_T0000341;gene_id=HG03009_ch_G0000126;Parent=HG03009_ch_T0000341;transcript_name=hg002_chrY_paternal_234.1;gene_name=TSPY10;ID=exon:HG03009_ch_T0000341:5;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	9416242	9419038	.	+	.	source_gene_common_name=TSPY1;source_gene=hg002_chrY_paternal_220;alternative_source_transcripts=hg002_chrY_paternal_220.1,hg002_chrY_paternal_222.2;gene_id=HG03009_ch_G0000127;gene_biotype=protein_coding;gene_name=TSPY1;gene_sources=liftoff,augTM;ID=HG03009_ch_G0000127;Name=TSPY1
HG03009_chrY	CAT	transcript	9416242	9419038	100	+	.	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.1,hg002_chrY_paternal_222.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000342;gene_id=HG03009_ch_G0000127;Parent=HG03009_ch_G0000127;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=HG03009_ch_T0000342;Name=TSPY1
HG03009_chrY	CAT	exon	9416242	9416773	.	+	.	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.1,hg002_chrY_paternal_222.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000342;gene_id=HG03009_ch_G0000127;Parent=HG03009_ch_T0000342;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000342:0;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9416288	9416773	.	+	0	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.1,hg002_chrY_paternal_222.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000342;gene_id=HG03009_ch_G0000127;Parent=HG03009_ch_T0000342;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000342:0;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	9416288	9416290	.	+	0	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.1,hg002_chrY_paternal_222.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000342;gene_id=HG03009_ch_G0000127;Parent=HG03009_ch_T0000342;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=start_codon:HG03009_ch_T0000342;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9416774	9417380	.	+	.	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.1,hg002_chrY_paternal_222.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000342;gene_id=HG03009_ch_G0000127;Parent=HG03009_ch_T0000342;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000342:0;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9417381	9417458	.	+	.	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.1,hg002_chrY_paternal_222.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000342;gene_id=HG03009_ch_G0000127;Parent=HG03009_ch_T0000342;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000342:1;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9417381	9417458	.	+	0	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.1,hg002_chrY_paternal_222.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000342;gene_id=HG03009_ch_G0000127;Parent=HG03009_ch_T0000342;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000342:1;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9417459	9417586	.	+	.	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.1,hg002_chrY_paternal_222.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000342;gene_id=HG03009_ch_G0000127;Parent=HG03009_ch_T0000342;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000342:1;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9417587	9417698	.	+	.	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.1,hg002_chrY_paternal_222.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000342;gene_id=HG03009_ch_G0000127;Parent=HG03009_ch_T0000342;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000342:2;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9417587	9417698	.	+	0	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.1,hg002_chrY_paternal_222.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000342;gene_id=HG03009_ch_G0000127;Parent=HG03009_ch_T0000342;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000342:2;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9417699	9417799	.	+	.	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.1,hg002_chrY_paternal_222.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000342;gene_id=HG03009_ch_G0000127;Parent=HG03009_ch_T0000342;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000342:2;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9417800	9417945	.	+	.	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.1,hg002_chrY_paternal_222.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000342;gene_id=HG03009_ch_G0000127;Parent=HG03009_ch_T0000342;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000342:3;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9417800	9417945	.	+	2	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.1,hg002_chrY_paternal_222.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000342;gene_id=HG03009_ch_G0000127;Parent=HG03009_ch_T0000342;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000342:3;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9417946	9418040	.	+	.	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.1,hg002_chrY_paternal_222.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000342;gene_id=HG03009_ch_G0000127;Parent=HG03009_ch_T0000342;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000342:3;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9418041	9418133	.	+	.	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.1,hg002_chrY_paternal_222.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000342;gene_id=HG03009_ch_G0000127;Parent=HG03009_ch_T0000342;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000342:4;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9418041	9418103	.	+	0	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.1,hg002_chrY_paternal_222.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000342;gene_id=HG03009_ch_G0000127;Parent=HG03009_ch_T0000342;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000342:4;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	9418101	9418103	.	+	0	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.1,hg002_chrY_paternal_222.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000342;gene_id=HG03009_ch_G0000127;Parent=HG03009_ch_T0000342;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=stop_codon:HG03009_ch_T0000342;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9418134	9418827	.	+	.	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.1,hg002_chrY_paternal_222.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000342;gene_id=HG03009_ch_G0000127;Parent=HG03009_ch_T0000342;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000342:4;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9418828	9419038	.	+	.	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.1,hg002_chrY_paternal_222.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000342;gene_id=HG03009_ch_G0000127;Parent=HG03009_ch_T0000342;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000342:5;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	9416242	9419038	100	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000343;gene_id=HG03009_ch_G0000127;Parent=HG03009_ch_G0000127;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=HG03009_ch_T0000343;Name=TSPY1
HG03009_chrY	CAT	exon	9416242	9416374	.	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000343;gene_id=HG03009_ch_G0000127;Parent=HG03009_ch_T0000343;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000343:0;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9416288	9416374	.	+	0	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000343;gene_id=HG03009_ch_G0000127;Parent=HG03009_ch_T0000343;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000343:0;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	9416288	9416290	.	+	0	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000343;gene_id=HG03009_ch_G0000127;Parent=HG03009_ch_T0000343;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=start_codon:HG03009_ch_T0000343;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9416375	9416635	.	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000343;gene_id=HG03009_ch_G0000127;Parent=HG03009_ch_T0000343;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000343:0;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9416636	9416773	.	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000343;gene_id=HG03009_ch_G0000127;Parent=HG03009_ch_T0000343;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000343:1;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9416636	9416773	.	+	0	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000343;gene_id=HG03009_ch_G0000127;Parent=HG03009_ch_T0000343;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000343:1;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9416774	9417380	.	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000343;gene_id=HG03009_ch_G0000127;Parent=HG03009_ch_T0000343;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000343:1;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9417381	9417458	.	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000343;gene_id=HG03009_ch_G0000127;Parent=HG03009_ch_T0000343;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000343:2;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9417381	9417458	.	+	0	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000343;gene_id=HG03009_ch_G0000127;Parent=HG03009_ch_T0000343;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000343:2;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9417459	9417586	.	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000343;gene_id=HG03009_ch_G0000127;Parent=HG03009_ch_T0000343;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000343:2;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9417587	9417698	.	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000343;gene_id=HG03009_ch_G0000127;Parent=HG03009_ch_T0000343;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000343:3;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9417587	9417698	.	+	0	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000343;gene_id=HG03009_ch_G0000127;Parent=HG03009_ch_T0000343;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000343:3;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9417699	9417799	.	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000343;gene_id=HG03009_ch_G0000127;Parent=HG03009_ch_T0000343;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000343:3;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9417800	9417945	.	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000343;gene_id=HG03009_ch_G0000127;Parent=HG03009_ch_T0000343;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000343:4;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9417800	9417945	.	+	2	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000343;gene_id=HG03009_ch_G0000127;Parent=HG03009_ch_T0000343;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000343:4;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9417946	9418051	.	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000343;gene_id=HG03009_ch_G0000127;Parent=HG03009_ch_T0000343;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000343:4;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9418052	9418133	.	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000343;gene_id=HG03009_ch_G0000127;Parent=HG03009_ch_T0000343;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000343:5;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9418052	9418133	.	+	0	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000343;gene_id=HG03009_ch_G0000127;Parent=HG03009_ch_T0000343;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000343:5;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9418134	9418827	.	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000343;gene_id=HG03009_ch_G0000127;Parent=HG03009_ch_T0000343;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000343:5;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9418828	9419038	.	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000343;gene_id=HG03009_ch_G0000127;Parent=HG03009_ch_T0000343;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000343:6;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9418828	9418850	.	+	2	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000343;gene_id=HG03009_ch_G0000127;Parent=HG03009_ch_T0000343;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000343:6;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	9418848	9418850	.	+	0	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000343;gene_id=HG03009_ch_G0000127;Parent=HG03009_ch_T0000343;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=stop_codon:HG03009_ch_T0000343;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	9416242	9419038	100	+	.	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.3,hg002_chrY_paternal_222.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000344;gene_id=HG03009_ch_G0000127;Parent=HG03009_ch_G0000127;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=HG03009_ch_T0000344;Name=TSPY1
HG03009_chrY	CAT	exon	9416242	9416773	.	+	.	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.3,hg002_chrY_paternal_222.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000344;gene_id=HG03009_ch_G0000127;Parent=HG03009_ch_T0000344;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000344:0;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9416288	9416773	.	+	0	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.3,hg002_chrY_paternal_222.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000344;gene_id=HG03009_ch_G0000127;Parent=HG03009_ch_T0000344;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000344:0;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	9416288	9416290	.	+	0	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.3,hg002_chrY_paternal_222.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000344;gene_id=HG03009_ch_G0000127;Parent=HG03009_ch_T0000344;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=start_codon:HG03009_ch_T0000344;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9416774	9417380	.	+	.	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.3,hg002_chrY_paternal_222.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000344;gene_id=HG03009_ch_G0000127;Parent=HG03009_ch_T0000344;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000344:0;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9417381	9417458	.	+	.	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.3,hg002_chrY_paternal_222.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000344;gene_id=HG03009_ch_G0000127;Parent=HG03009_ch_T0000344;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000344:1;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9417381	9417458	.	+	0	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.3,hg002_chrY_paternal_222.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000344;gene_id=HG03009_ch_G0000127;Parent=HG03009_ch_T0000344;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000344:1;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9417459	9417586	.	+	.	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.3,hg002_chrY_paternal_222.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000344;gene_id=HG03009_ch_G0000127;Parent=HG03009_ch_T0000344;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000344:1;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9417587	9417698	.	+	.	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.3,hg002_chrY_paternal_222.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000344;gene_id=HG03009_ch_G0000127;Parent=HG03009_ch_T0000344;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000344:2;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9417587	9417698	.	+	0	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.3,hg002_chrY_paternal_222.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000344;gene_id=HG03009_ch_G0000127;Parent=HG03009_ch_T0000344;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000344:2;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9417699	9417799	.	+	.	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.3,hg002_chrY_paternal_222.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000344;gene_id=HG03009_ch_G0000127;Parent=HG03009_ch_T0000344;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000344:2;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9417800	9417945	.	+	.	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.3,hg002_chrY_paternal_222.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000344;gene_id=HG03009_ch_G0000127;Parent=HG03009_ch_T0000344;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000344:3;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9417800	9417945	.	+	2	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.3,hg002_chrY_paternal_222.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000344;gene_id=HG03009_ch_G0000127;Parent=HG03009_ch_T0000344;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000344:3;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9417946	9418051	.	+	.	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.3,hg002_chrY_paternal_222.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000344;gene_id=HG03009_ch_G0000127;Parent=HG03009_ch_T0000344;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000344:3;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9418052	9418133	.	+	.	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.3,hg002_chrY_paternal_222.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000344;gene_id=HG03009_ch_G0000127;Parent=HG03009_ch_T0000344;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000344:4;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9418052	9418133	.	+	0	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.3,hg002_chrY_paternal_222.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000344;gene_id=HG03009_ch_G0000127;Parent=HG03009_ch_T0000344;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000344:4;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9418134	9418827	.	+	.	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.3,hg002_chrY_paternal_222.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000344;gene_id=HG03009_ch_G0000127;Parent=HG03009_ch_T0000344;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000344:4;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9418828	9419038	.	+	.	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.3,hg002_chrY_paternal_222.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000344;gene_id=HG03009_ch_G0000127;Parent=HG03009_ch_T0000344;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000344:5;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9418828	9418850	.	+	2	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.3,hg002_chrY_paternal_222.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000344;gene_id=HG03009_ch_G0000127;Parent=HG03009_ch_T0000344;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000344:5;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	9418848	9418850	.	+	0	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.3,hg002_chrY_paternal_222.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000344;gene_id=HG03009_ch_G0000127;Parent=HG03009_ch_T0000344;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=stop_codon:HG03009_ch_T0000344;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	9416242	9419038	100	+	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.4,hg002_chrY_paternal_222.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000345;gene_id=HG03009_ch_G0000127;Parent=HG03009_ch_G0000127;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=HG03009_ch_T0000345;Name=TSPY1
HG03009_chrY	CAT	exon	9416242	9416773	.	+	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.4,hg002_chrY_paternal_222.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000345;gene_id=HG03009_ch_G0000127;Parent=HG03009_ch_T0000345;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000345:0;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9416288	9416773	.	+	0	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.4,hg002_chrY_paternal_222.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000345;gene_id=HG03009_ch_G0000127;Parent=HG03009_ch_T0000345;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000345:0;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	9416288	9416290	.	+	0	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.4,hg002_chrY_paternal_222.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000345;gene_id=HG03009_ch_G0000127;Parent=HG03009_ch_T0000345;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=start_codon:HG03009_ch_T0000345;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9416774	9417380	.	+	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.4,hg002_chrY_paternal_222.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000345;gene_id=HG03009_ch_G0000127;Parent=HG03009_ch_T0000345;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000345:0;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9417381	9417458	.	+	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.4,hg002_chrY_paternal_222.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000345;gene_id=HG03009_ch_G0000127;Parent=HG03009_ch_T0000345;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000345:1;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9417381	9417458	.	+	0	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.4,hg002_chrY_paternal_222.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000345;gene_id=HG03009_ch_G0000127;Parent=HG03009_ch_T0000345;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000345:1;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9417459	9417586	.	+	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.4,hg002_chrY_paternal_222.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000345;gene_id=HG03009_ch_G0000127;Parent=HG03009_ch_T0000345;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000345:1;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9417587	9417698	.	+	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.4,hg002_chrY_paternal_222.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000345;gene_id=HG03009_ch_G0000127;Parent=HG03009_ch_T0000345;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000345:2;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9417587	9417698	.	+	0	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.4,hg002_chrY_paternal_222.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000345;gene_id=HG03009_ch_G0000127;Parent=HG03009_ch_T0000345;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000345:2;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9417699	9417806	.	+	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.4,hg002_chrY_paternal_222.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000345;gene_id=HG03009_ch_G0000127;Parent=HG03009_ch_T0000345;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000345:2;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9417807	9417945	.	+	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.4,hg002_chrY_paternal_222.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000345;gene_id=HG03009_ch_G0000127;Parent=HG03009_ch_T0000345;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000345:3;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9417807	9417945	.	+	2	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.4,hg002_chrY_paternal_222.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000345;gene_id=HG03009_ch_G0000127;Parent=HG03009_ch_T0000345;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000345:3;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9417946	9418051	.	+	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.4,hg002_chrY_paternal_222.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000345;gene_id=HG03009_ch_G0000127;Parent=HG03009_ch_T0000345;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000345:3;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9418052	9418133	.	+	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.4,hg002_chrY_paternal_222.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000345;gene_id=HG03009_ch_G0000127;Parent=HG03009_ch_T0000345;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000345:4;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9418052	9418103	.	+	1	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.4,hg002_chrY_paternal_222.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000345;gene_id=HG03009_ch_G0000127;Parent=HG03009_ch_T0000345;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000345:4;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	9418101	9418103	.	+	0	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.4,hg002_chrY_paternal_222.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000345;gene_id=HG03009_ch_G0000127;Parent=HG03009_ch_T0000345;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=stop_codon:HG03009_ch_T0000345;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9418134	9418827	.	+	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.4,hg002_chrY_paternal_222.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000345;gene_id=HG03009_ch_G0000127;Parent=HG03009_ch_T0000345;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000345:4;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9418828	9419038	.	+	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.4,hg002_chrY_paternal_222.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000345;gene_id=HG03009_ch_G0000127;Parent=HG03009_ch_T0000345;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000345:5;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	9416242	9419038	1000	+	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_222.4,hg002_chrY_paternal_220.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000346;gene_id=HG03009_ch_G0000127;Parent=HG03009_ch_G0000127;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=HG03009_ch_T0000346;Name=TSPY1
HG03009_chrY	CAT	exon	9416242	9416773	.	+	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_222.4,hg002_chrY_paternal_220.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000346;gene_id=HG03009_ch_G0000127;Parent=HG03009_ch_T0000346;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=exon:HG03009_ch_T0000346:0;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9416774	9417380	.	+	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_222.4,hg002_chrY_paternal_220.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000346;gene_id=HG03009_ch_G0000127;Parent=HG03009_ch_T0000346;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=intron:HG03009_ch_T0000346:0;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9417381	9417458	.	+	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_222.4,hg002_chrY_paternal_220.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000346;gene_id=HG03009_ch_G0000127;Parent=HG03009_ch_T0000346;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=exon:HG03009_ch_T0000346:1;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9417459	9417586	.	+	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_222.4,hg002_chrY_paternal_220.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000346;gene_id=HG03009_ch_G0000127;Parent=HG03009_ch_T0000346;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=intron:HG03009_ch_T0000346:1;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9417587	9417698	.	+	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_222.4,hg002_chrY_paternal_220.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000346;gene_id=HG03009_ch_G0000127;Parent=HG03009_ch_T0000346;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=exon:HG03009_ch_T0000346:2;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9417699	9417806	.	+	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_222.4,hg002_chrY_paternal_220.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000346;gene_id=HG03009_ch_G0000127;Parent=HG03009_ch_T0000346;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=intron:HG03009_ch_T0000346:2;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9417807	9417945	.	+	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_222.4,hg002_chrY_paternal_220.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000346;gene_id=HG03009_ch_G0000127;Parent=HG03009_ch_T0000346;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=exon:HG03009_ch_T0000346:3;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9417946	9418040	.	+	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_222.4,hg002_chrY_paternal_220.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000346;gene_id=HG03009_ch_G0000127;Parent=HG03009_ch_T0000346;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=intron:HG03009_ch_T0000346:3;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9418041	9418133	.	+	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_222.4,hg002_chrY_paternal_220.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000346;gene_id=HG03009_ch_G0000127;Parent=HG03009_ch_T0000346;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=exon:HG03009_ch_T0000346:4;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9418134	9418827	.	+	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_222.4,hg002_chrY_paternal_220.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000346;gene_id=HG03009_ch_G0000127;Parent=HG03009_ch_T0000346;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=intron:HG03009_ch_T0000346:4;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9418828	9419038	.	+	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_222.4,hg002_chrY_paternal_220.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000346;gene_id=HG03009_ch_G0000127;Parent=HG03009_ch_T0000346;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=exon:HG03009_ch_T0000346:5;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	9428329	9433917	.	-	.	source_gene_common_name=FAM197Y4;source_gene=hg002_chrY_paternal_223;gene_id=HG03009_ch_G0000128;gene_biotype=lncRNA;gene_name=FAM197Y4;gene_sources=liftoff,transMap_pairwise;ID=HG03009_ch_G0000128;Name=FAM197Y4
HG03009_chrY	CAT	transcript	9428329	9433917	1000	-	.	source_transcript=hg002_chrY_paternal_223.1;source_transcript_name=hg002_chrY_paternal_223.1;source_gene=hg002_chrY_paternal_223;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_223;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_223.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_223.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;AdditionalSources=liftoff;transcript_id=HG03009_ch_T0000347;gene_id=HG03009_ch_G0000128;Parent=HG03009_ch_G0000128;transcript_name=hg002_chrY_paternal_223.1;gene_name=FAM197Y4;ID=HG03009_ch_T0000347;Name=FAM197Y4
HG03009_chrY	CAT	exon	9428329	9428388	.	-	.	source_transcript=hg002_chrY_paternal_223.1;source_transcript_name=hg002_chrY_paternal_223.1;source_gene=hg002_chrY_paternal_223;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_223;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_223.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_223.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;AdditionalSources=liftoff;transcript_id=HG03009_ch_T0000347;gene_id=HG03009_ch_G0000128;Parent=HG03009_ch_T0000347;transcript_name=hg002_chrY_paternal_223.1;gene_name=FAM197Y4;ID=exon:HG03009_ch_T0000347:0;Name=FAM197Y4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9428389	9431937	.	-	.	source_transcript=hg002_chrY_paternal_223.1;source_transcript_name=hg002_chrY_paternal_223.1;source_gene=hg002_chrY_paternal_223;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_223;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_223.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_223.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;AdditionalSources=liftoff;transcript_id=HG03009_ch_T0000347;gene_id=HG03009_ch_G0000128;Parent=HG03009_ch_T0000347;transcript_name=hg002_chrY_paternal_223.1;gene_name=FAM197Y4;ID=intron:HG03009_ch_T0000347:0;Name=FAM197Y4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9431938	9432096	.	-	.	source_transcript=hg002_chrY_paternal_223.1;source_transcript_name=hg002_chrY_paternal_223.1;source_gene=hg002_chrY_paternal_223;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_223;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_223.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_223.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;AdditionalSources=liftoff;transcript_id=HG03009_ch_T0000347;gene_id=HG03009_ch_G0000128;Parent=HG03009_ch_T0000347;transcript_name=hg002_chrY_paternal_223.1;gene_name=FAM197Y4;ID=exon:HG03009_ch_T0000347:1;Name=FAM197Y4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9432097	9433583	.	-	.	source_transcript=hg002_chrY_paternal_223.1;source_transcript_name=hg002_chrY_paternal_223.1;source_gene=hg002_chrY_paternal_223;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_223;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_223.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_223.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;AdditionalSources=liftoff;transcript_id=HG03009_ch_T0000347;gene_id=HG03009_ch_G0000128;Parent=HG03009_ch_T0000347;transcript_name=hg002_chrY_paternal_223.1;gene_name=FAM197Y4;ID=intron:HG03009_ch_T0000347:1;Name=FAM197Y4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9433584	9433729	.	-	.	source_transcript=hg002_chrY_paternal_223.1;source_transcript_name=hg002_chrY_paternal_223.1;source_gene=hg002_chrY_paternal_223;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_223;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_223.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_223.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;AdditionalSources=liftoff;transcript_id=HG03009_ch_T0000347;gene_id=HG03009_ch_G0000128;Parent=HG03009_ch_T0000347;transcript_name=hg002_chrY_paternal_223.1;gene_name=FAM197Y4;ID=exon:HG03009_ch_T0000347:2;Name=FAM197Y4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9433730	9433815	.	-	.	source_transcript=hg002_chrY_paternal_223.1;source_transcript_name=hg002_chrY_paternal_223.1;source_gene=hg002_chrY_paternal_223;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_223;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_223.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_223.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;AdditionalSources=liftoff;transcript_id=HG03009_ch_T0000347;gene_id=HG03009_ch_G0000128;Parent=HG03009_ch_T0000347;transcript_name=hg002_chrY_paternal_223.1;gene_name=FAM197Y4;ID=intron:HG03009_ch_T0000347:2;Name=FAM197Y4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9433816	9433917	.	-	.	source_transcript=hg002_chrY_paternal_223.1;source_transcript_name=hg002_chrY_paternal_223.1;source_gene=hg002_chrY_paternal_223;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_223;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_223.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_223.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;AdditionalSources=liftoff;transcript_id=HG03009_ch_T0000347;gene_id=HG03009_ch_G0000128;Parent=HG03009_ch_T0000347;transcript_name=hg002_chrY_paternal_223.1;gene_name=FAM197Y4;ID=exon:HG03009_ch_T0000347:3;Name=FAM197Y4;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	9436530	9439344	.	+	.	source_gene_common_name=TSPY4;source_gene=hg002_chrY_paternal_222;gene_id=HG03009_ch_G0000129;gene_biotype=protein_coding;gene_name=TSPY4;gene_sources=augTM,transMap;ID=HG03009_ch_G0000129;Name=TSPY4
HG03009_chrY	CAT	transcript	9436530	9439344	1000	+	.	source_transcript=hg002_chrY_paternal_222.3;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_222.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_222.3;transcript_score=299.744;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000348;gene_id=HG03009_ch_G0000129;Parent=HG03009_ch_G0000129;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=HG03009_ch_T0000348;Name=TSPY4
HG03009_chrY	CAT	exon	9436530	9437079	.	+	.	source_transcript=hg002_chrY_paternal_222.3;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_222.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_222.3;transcript_score=299.744;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000348;gene_id=HG03009_ch_G0000129;Parent=HG03009_ch_T0000348;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000348:0;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9436576	9437079	.	+	0	source_transcript=hg002_chrY_paternal_222.3;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_222.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_222.3;transcript_score=299.744;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000348;gene_id=HG03009_ch_G0000129;Parent=HG03009_ch_T0000348;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=CDS:HG03009_ch_T0000348:0;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	9436576	9436578	.	+	0	source_transcript=hg002_chrY_paternal_222.3;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_222.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_222.3;transcript_score=299.744;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000348;gene_id=HG03009_ch_G0000129;Parent=HG03009_ch_T0000348;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=start_codon:HG03009_ch_T0000348;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9437080	9437686	.	+	.	source_transcript=hg002_chrY_paternal_222.3;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_222.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_222.3;transcript_score=299.744;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000348;gene_id=HG03009_ch_G0000129;Parent=HG03009_ch_T0000348;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=intron:HG03009_ch_T0000348:0;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9437687	9437764	.	+	.	source_transcript=hg002_chrY_paternal_222.3;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_222.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_222.3;transcript_score=299.744;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000348;gene_id=HG03009_ch_G0000129;Parent=HG03009_ch_T0000348;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000348:1;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9437687	9437764	.	+	0	source_transcript=hg002_chrY_paternal_222.3;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_222.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_222.3;transcript_score=299.744;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000348;gene_id=HG03009_ch_G0000129;Parent=HG03009_ch_T0000348;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=CDS:HG03009_ch_T0000348:1;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9437765	9437892	.	+	.	source_transcript=hg002_chrY_paternal_222.3;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_222.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_222.3;transcript_score=299.744;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000348;gene_id=HG03009_ch_G0000129;Parent=HG03009_ch_T0000348;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=intron:HG03009_ch_T0000348:1;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9437893	9438004	.	+	.	source_transcript=hg002_chrY_paternal_222.3;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_222.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_222.3;transcript_score=299.744;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000348;gene_id=HG03009_ch_G0000129;Parent=HG03009_ch_T0000348;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000348:2;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9437893	9438004	.	+	0	source_transcript=hg002_chrY_paternal_222.3;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_222.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_222.3;transcript_score=299.744;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000348;gene_id=HG03009_ch_G0000129;Parent=HG03009_ch_T0000348;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=CDS:HG03009_ch_T0000348:2;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9438005	9438112	.	+	.	source_transcript=hg002_chrY_paternal_222.3;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_222.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_222.3;transcript_score=299.744;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000348;gene_id=HG03009_ch_G0000129;Parent=HG03009_ch_T0000348;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=intron:HG03009_ch_T0000348:2;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9438113	9438251	.	+	.	source_transcript=hg002_chrY_paternal_222.3;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_222.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_222.3;transcript_score=299.744;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000348;gene_id=HG03009_ch_G0000129;Parent=HG03009_ch_T0000348;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000348:3;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9438113	9438251	.	+	2	source_transcript=hg002_chrY_paternal_222.3;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_222.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_222.3;transcript_score=299.744;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000348;gene_id=HG03009_ch_G0000129;Parent=HG03009_ch_T0000348;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=CDS:HG03009_ch_T0000348:3;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9438252	9438357	.	+	.	source_transcript=hg002_chrY_paternal_222.3;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_222.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_222.3;transcript_score=299.744;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000348;gene_id=HG03009_ch_G0000129;Parent=HG03009_ch_T0000348;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=intron:HG03009_ch_T0000348:3;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9438358	9438439	.	+	.	source_transcript=hg002_chrY_paternal_222.3;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_222.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_222.3;transcript_score=299.744;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000348;gene_id=HG03009_ch_G0000129;Parent=HG03009_ch_T0000348;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000348:4;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9438358	9438409	.	+	1	source_transcript=hg002_chrY_paternal_222.3;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_222.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_222.3;transcript_score=299.744;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000348;gene_id=HG03009_ch_G0000129;Parent=HG03009_ch_T0000348;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=CDS:HG03009_ch_T0000348:4;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	9438407	9438409	.	+	0	source_transcript=hg002_chrY_paternal_222.3;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_222.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_222.3;transcript_score=299.744;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000348;gene_id=HG03009_ch_G0000129;Parent=HG03009_ch_T0000348;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=stop_codon:HG03009_ch_T0000348;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9438440	9439133	.	+	.	source_transcript=hg002_chrY_paternal_222.3;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_222.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_222.3;transcript_score=299.744;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000348;gene_id=HG03009_ch_G0000129;Parent=HG03009_ch_T0000348;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=intron:HG03009_ch_T0000348:4;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9439134	9439344	.	+	.	source_transcript=hg002_chrY_paternal_222.3;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_222.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_222.3;transcript_score=299.744;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000348;gene_id=HG03009_ch_G0000129;Parent=HG03009_ch_T0000348;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000348:5;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	9436530	9439344	1000	+	.	source_transcript=hg002_chrY_paternal_222.4;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_222.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_222.4;transcript_score=299.746;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000349;gene_id=HG03009_ch_G0000129;Parent=HG03009_ch_G0000129;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=HG03009_ch_T0000349;Name=TSPY4
HG03009_chrY	CAT	exon	9436530	9437079	.	+	.	source_transcript=hg002_chrY_paternal_222.4;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_222.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_222.4;transcript_score=299.746;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000349;gene_id=HG03009_ch_G0000129;Parent=HG03009_ch_T0000349;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000349:0;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9437080	9437686	.	+	.	source_transcript=hg002_chrY_paternal_222.4;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_222.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_222.4;transcript_score=299.746;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000349;gene_id=HG03009_ch_G0000129;Parent=HG03009_ch_T0000349;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=intron:HG03009_ch_T0000349:0;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9437687	9437764	.	+	.	source_transcript=hg002_chrY_paternal_222.4;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_222.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_222.4;transcript_score=299.746;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000349;gene_id=HG03009_ch_G0000129;Parent=HG03009_ch_T0000349;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000349:1;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9437765	9437892	.	+	.	source_transcript=hg002_chrY_paternal_222.4;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_222.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_222.4;transcript_score=299.746;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000349;gene_id=HG03009_ch_G0000129;Parent=HG03009_ch_T0000349;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=intron:HG03009_ch_T0000349:1;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9437893	9438004	.	+	.	source_transcript=hg002_chrY_paternal_222.4;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_222.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_222.4;transcript_score=299.746;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000349;gene_id=HG03009_ch_G0000129;Parent=HG03009_ch_T0000349;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000349:2;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9438005	9438112	.	+	.	source_transcript=hg002_chrY_paternal_222.4;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_222.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_222.4;transcript_score=299.746;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000349;gene_id=HG03009_ch_G0000129;Parent=HG03009_ch_T0000349;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=intron:HG03009_ch_T0000349:2;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9438113	9438251	.	+	.	source_transcript=hg002_chrY_paternal_222.4;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_222.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_222.4;transcript_score=299.746;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000349;gene_id=HG03009_ch_G0000129;Parent=HG03009_ch_T0000349;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000349:3;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9438252	9438346	.	+	.	source_transcript=hg002_chrY_paternal_222.4;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_222.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_222.4;transcript_score=299.746;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000349;gene_id=HG03009_ch_G0000129;Parent=HG03009_ch_T0000349;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=intron:HG03009_ch_T0000349:3;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9438347	9438439	.	+	.	source_transcript=hg002_chrY_paternal_222.4;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_222.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_222.4;transcript_score=299.746;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000349;gene_id=HG03009_ch_G0000129;Parent=HG03009_ch_T0000349;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000349:4;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9438440	9439133	.	+	.	source_transcript=hg002_chrY_paternal_222.4;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_222.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_222.4;transcript_score=299.746;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000349;gene_id=HG03009_ch_G0000129;Parent=HG03009_ch_T0000349;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=intron:HG03009_ch_T0000349:4;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9439134	9439344	.	+	.	source_transcript=hg002_chrY_paternal_222.4;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_222.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_222.4;transcript_score=299.746;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000349;gene_id=HG03009_ch_G0000129;Parent=HG03009_ch_T0000349;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=exon:HG03009_ch_T0000349:5;Name=TSPY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	9448614	9454221	.	-	.	source_gene_common_name=FAM197Y3;source_gene=hg002_chrY_paternal_187;alternative_source_transcripts=hg002_chrY_paternal_225.1,hg002_chrY_paternal_225.1;gene_id=HG03009_ch_G0000130;gene_biotype=lncRNA;gene_name=FAM197Y3;gene_sources=liftoff;ID=HG03009_ch_G0000130;Name=FAM197Y3
HG03009_chrY	CAT	transcript	9448614	9454221	1000	-	.	source_transcript=hg002_chrY_paternal_187.1;source_transcript_name=hg002_chrY_paternal_187.1;source_gene=hg002_chrY_paternal_187;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_187;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_187.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_187.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_225.1,hg002_chrY_paternal_225.1;transcript_id=HG03009_ch_T0000350;gene_id=HG03009_ch_G0000130;Parent=HG03009_ch_G0000130;transcript_name=hg002_chrY_paternal_187.1;gene_name=FAM197Y3;ID=HG03009_ch_T0000350;Name=FAM197Y3
HG03009_chrY	CAT	exon	9448614	9448673	.	-	.	source_transcript=hg002_chrY_paternal_187.1;source_transcript_name=hg002_chrY_paternal_187.1;source_gene=hg002_chrY_paternal_187;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_187;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_187.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_225.1,hg002_chrY_paternal_225.1;transcript_id=HG03009_ch_T0000350;gene_id=HG03009_ch_G0000130;Parent=HG03009_ch_T0000350;transcript_name=hg002_chrY_paternal_187.1;gene_name=FAM197Y3;ID=exon:HG03009_ch_T0000350:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9448674	9452224	.	-	.	source_transcript=hg002_chrY_paternal_187.1;source_transcript_name=hg002_chrY_paternal_187.1;source_gene=hg002_chrY_paternal_187;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_187;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_187.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_225.1,hg002_chrY_paternal_225.1;transcript_id=HG03009_ch_T0000350;gene_id=HG03009_ch_G0000130;Parent=HG03009_ch_T0000350;transcript_name=hg002_chrY_paternal_187.1;gene_name=FAM197Y3;ID=intron:HG03009_ch_T0000350:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9452225	9452383	.	-	.	source_transcript=hg002_chrY_paternal_187.1;source_transcript_name=hg002_chrY_paternal_187.1;source_gene=hg002_chrY_paternal_187;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_187;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_187.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_225.1,hg002_chrY_paternal_225.1;transcript_id=HG03009_ch_T0000350;gene_id=HG03009_ch_G0000130;Parent=HG03009_ch_T0000350;transcript_name=hg002_chrY_paternal_187.1;gene_name=FAM197Y3;ID=exon:HG03009_ch_T0000350:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9452384	9453887	.	-	.	source_transcript=hg002_chrY_paternal_187.1;source_transcript_name=hg002_chrY_paternal_187.1;source_gene=hg002_chrY_paternal_187;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_187;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_187.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_225.1,hg002_chrY_paternal_225.1;transcript_id=HG03009_ch_T0000350;gene_id=HG03009_ch_G0000130;Parent=HG03009_ch_T0000350;transcript_name=hg002_chrY_paternal_187.1;gene_name=FAM197Y3;ID=intron:HG03009_ch_T0000350:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9453888	9454033	.	-	.	source_transcript=hg002_chrY_paternal_187.1;source_transcript_name=hg002_chrY_paternal_187.1;source_gene=hg002_chrY_paternal_187;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_187;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_187.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_225.1,hg002_chrY_paternal_225.1;transcript_id=HG03009_ch_T0000350;gene_id=HG03009_ch_G0000130;Parent=HG03009_ch_T0000350;transcript_name=hg002_chrY_paternal_187.1;gene_name=FAM197Y3;ID=exon:HG03009_ch_T0000350:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9454034	9454119	.	-	.	source_transcript=hg002_chrY_paternal_187.1;source_transcript_name=hg002_chrY_paternal_187.1;source_gene=hg002_chrY_paternal_187;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_187;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_187.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_225.1,hg002_chrY_paternal_225.1;transcript_id=HG03009_ch_T0000350;gene_id=HG03009_ch_G0000130;Parent=HG03009_ch_T0000350;transcript_name=hg002_chrY_paternal_187.1;gene_name=FAM197Y3;ID=intron:HG03009_ch_T0000350:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9454120	9454221	.	-	.	source_transcript=hg002_chrY_paternal_187.1;source_transcript_name=hg002_chrY_paternal_187.1;source_gene=hg002_chrY_paternal_187;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_187;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_187.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_225.1,hg002_chrY_paternal_225.1;transcript_id=HG03009_ch_T0000350;gene_id=HG03009_ch_G0000130;Parent=HG03009_ch_T0000350;transcript_name=hg002_chrY_paternal_187.1;gene_name=FAM197Y3;ID=exon:HG03009_ch_T0000350:3;Name=FAM197Y3;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	9456830	9459644	.	+	.	source_gene_common_name=TSPY10;source_gene=hg002_chrY_paternal_226;alternative_source_transcripts=hg002_chrY_paternal_226.3;gene_id=HG03009_ch_G0000131;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=augTM,transMap;ID=HG03009_ch_G0000131;Name=TSPY10
HG03009_chrY	CAT	transcript	9456830	9459644	9910	+	.	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=297.966;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_226.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000351;gene_id=HG03009_ch_G0000131;Parent=HG03009_ch_G0000131;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=HG03009_ch_T0000351;Name=TSPY10
HG03009_chrY	CAT	exon	9456830	9457379	.	+	.	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=297.966;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_226.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000351;gene_id=HG03009_ch_G0000131;Parent=HG03009_ch_T0000351;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000351:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9456876	9457379	.	+	0	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=297.966;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_226.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000351;gene_id=HG03009_ch_G0000131;Parent=HG03009_ch_T0000351;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000351:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	9456876	9456878	.	+	0	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=297.966;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_226.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000351;gene_id=HG03009_ch_G0000131;Parent=HG03009_ch_T0000351;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=start_codon:HG03009_ch_T0000351;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9457380	9457986	.	+	.	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=297.966;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_226.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000351;gene_id=HG03009_ch_G0000131;Parent=HG03009_ch_T0000351;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000351:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9457987	9458064	.	+	.	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=297.966;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_226.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000351;gene_id=HG03009_ch_G0000131;Parent=HG03009_ch_T0000351;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000351:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9457987	9458064	.	+	0	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=297.966;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_226.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000351;gene_id=HG03009_ch_G0000131;Parent=HG03009_ch_T0000351;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000351:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9458065	9458192	.	+	.	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=297.966;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_226.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000351;gene_id=HG03009_ch_G0000131;Parent=HG03009_ch_T0000351;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000351:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9458193	9458304	.	+	.	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=297.966;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_226.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000351;gene_id=HG03009_ch_G0000131;Parent=HG03009_ch_T0000351;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000351:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9458193	9458304	.	+	0	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=297.966;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_226.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000351;gene_id=HG03009_ch_G0000131;Parent=HG03009_ch_T0000351;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000351:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9458305	9458412	.	+	.	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=297.966;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_226.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000351;gene_id=HG03009_ch_G0000131;Parent=HG03009_ch_T0000351;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000351:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9458413	9458551	.	+	.	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=297.966;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_226.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000351;gene_id=HG03009_ch_G0000131;Parent=HG03009_ch_T0000351;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000351:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9458413	9458551	.	+	2	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=297.966;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_226.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000351;gene_id=HG03009_ch_G0000131;Parent=HG03009_ch_T0000351;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000351:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9458552	9458657	.	+	.	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=297.966;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_226.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000351;gene_id=HG03009_ch_G0000131;Parent=HG03009_ch_T0000351;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000351:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9458658	9458739	.	+	.	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=297.966;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_226.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000351;gene_id=HG03009_ch_G0000131;Parent=HG03009_ch_T0000351;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000351:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9458658	9458709	.	+	1	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=297.966;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_226.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000351;gene_id=HG03009_ch_G0000131;Parent=HG03009_ch_T0000351;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000351:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	9458707	9458709	.	+	0	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=297.966;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_226.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000351;gene_id=HG03009_ch_G0000131;Parent=HG03009_ch_T0000351;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=stop_codon:HG03009_ch_T0000351;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9458740	9459433	.	+	.	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=297.966;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_226.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000351;gene_id=HG03009_ch_G0000131;Parent=HG03009_ch_T0000351;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000351:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9459434	9459644	.	+	.	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=297.966;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_226.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000351;gene_id=HG03009_ch_G0000131;Parent=HG03009_ch_T0000351;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000351:5;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	9456830	9459644	1000	+	.	source_transcript=hg002_chrY_paternal_226.4;source_transcript_name=hg002_chrY_paternal_226.1;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_226.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_226.4;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_226.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000352;gene_id=HG03009_ch_G0000131;Parent=HG03009_ch_G0000131;transcript_name=hg002_chrY_paternal_226.1;gene_name=TSPY10;ID=HG03009_ch_T0000352;Name=TSPY10
HG03009_chrY	CAT	exon	9456830	9457379	.	+	.	source_transcript=hg002_chrY_paternal_226.4;source_transcript_name=hg002_chrY_paternal_226.1;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_226.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_226.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_226.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000352;gene_id=HG03009_ch_G0000131;Parent=HG03009_ch_T0000352;transcript_name=hg002_chrY_paternal_226.1;gene_name=TSPY10;ID=exon:HG03009_ch_T0000352:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9457380	9457986	.	+	.	source_transcript=hg002_chrY_paternal_226.4;source_transcript_name=hg002_chrY_paternal_226.1;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_226.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_226.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_226.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000352;gene_id=HG03009_ch_G0000131;Parent=HG03009_ch_T0000352;transcript_name=hg002_chrY_paternal_226.1;gene_name=TSPY10;ID=intron:HG03009_ch_T0000352:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9457987	9458064	.	+	.	source_transcript=hg002_chrY_paternal_226.4;source_transcript_name=hg002_chrY_paternal_226.1;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_226.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_226.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_226.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000352;gene_id=HG03009_ch_G0000131;Parent=HG03009_ch_T0000352;transcript_name=hg002_chrY_paternal_226.1;gene_name=TSPY10;ID=exon:HG03009_ch_T0000352:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9458065	9458192	.	+	.	source_transcript=hg002_chrY_paternal_226.4;source_transcript_name=hg002_chrY_paternal_226.1;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_226.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_226.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_226.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000352;gene_id=HG03009_ch_G0000131;Parent=HG03009_ch_T0000352;transcript_name=hg002_chrY_paternal_226.1;gene_name=TSPY10;ID=intron:HG03009_ch_T0000352:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9458193	9458304	.	+	.	source_transcript=hg002_chrY_paternal_226.4;source_transcript_name=hg002_chrY_paternal_226.1;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_226.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_226.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_226.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000352;gene_id=HG03009_ch_G0000131;Parent=HG03009_ch_T0000352;transcript_name=hg002_chrY_paternal_226.1;gene_name=TSPY10;ID=exon:HG03009_ch_T0000352:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9458305	9458412	.	+	.	source_transcript=hg002_chrY_paternal_226.4;source_transcript_name=hg002_chrY_paternal_226.1;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_226.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_226.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_226.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000352;gene_id=HG03009_ch_G0000131;Parent=HG03009_ch_T0000352;transcript_name=hg002_chrY_paternal_226.1;gene_name=TSPY10;ID=intron:HG03009_ch_T0000352:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9458413	9458551	.	+	.	source_transcript=hg002_chrY_paternal_226.4;source_transcript_name=hg002_chrY_paternal_226.1;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_226.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_226.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_226.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000352;gene_id=HG03009_ch_G0000131;Parent=HG03009_ch_T0000352;transcript_name=hg002_chrY_paternal_226.1;gene_name=TSPY10;ID=exon:HG03009_ch_T0000352:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9458552	9458646	.	+	.	source_transcript=hg002_chrY_paternal_226.4;source_transcript_name=hg002_chrY_paternal_226.1;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_226.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_226.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_226.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000352;gene_id=HG03009_ch_G0000131;Parent=HG03009_ch_T0000352;transcript_name=hg002_chrY_paternal_226.1;gene_name=TSPY10;ID=intron:HG03009_ch_T0000352:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9458647	9458739	.	+	.	source_transcript=hg002_chrY_paternal_226.4;source_transcript_name=hg002_chrY_paternal_226.1;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_226.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_226.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_226.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000352;gene_id=HG03009_ch_G0000131;Parent=HG03009_ch_T0000352;transcript_name=hg002_chrY_paternal_226.1;gene_name=TSPY10;ID=exon:HG03009_ch_T0000352:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9458740	9459433	.	+	.	source_transcript=hg002_chrY_paternal_226.4;source_transcript_name=hg002_chrY_paternal_226.1;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_226.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_226.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_226.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000352;gene_id=HG03009_ch_G0000131;Parent=HG03009_ch_T0000352;transcript_name=hg002_chrY_paternal_226.1;gene_name=TSPY10;ID=intron:HG03009_ch_T0000352:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9459434	9459644	.	+	.	source_transcript=hg002_chrY_paternal_226.4;source_transcript_name=hg002_chrY_paternal_226.1;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_226.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_226.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_226.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000352;gene_id=HG03009_ch_G0000131;Parent=HG03009_ch_T0000352;transcript_name=hg002_chrY_paternal_226.1;gene_name=TSPY10;ID=exon:HG03009_ch_T0000352:5;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	9468914	9474521	.	-	.	source_gene_common_name=FAM197Y3;source_gene=hg002_chrY_paternal_211;gene_id=HG03009_ch_G0000132;gene_biotype=lncRNA;gene_name=FAM197Y3;gene_sources=liftoff;ID=HG03009_ch_G0000132;Name=FAM197Y3
HG03009_chrY	CAT	transcript	9468914	9474521	1000	-	.	source_transcript=hg002_chrY_paternal_211.1;source_transcript_name=hg002_chrY_paternal_211.1;source_gene=hg002_chrY_paternal_211;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_211;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_211.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_211.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG03009_ch_T0000353;gene_id=HG03009_ch_G0000132;Parent=HG03009_ch_G0000132;transcript_name=hg002_chrY_paternal_211.1;gene_name=FAM197Y3;ID=HG03009_ch_T0000353;Name=FAM197Y3
HG03009_chrY	CAT	exon	9468914	9468973	.	-	.	source_transcript=hg002_chrY_paternal_211.1;source_transcript_name=hg002_chrY_paternal_211.1;source_gene=hg002_chrY_paternal_211;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_211;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_211.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_211.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG03009_ch_T0000353;gene_id=HG03009_ch_G0000132;Parent=HG03009_ch_T0000353;transcript_name=hg002_chrY_paternal_211.1;gene_name=FAM197Y3;ID=exon:HG03009_ch_T0000353:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9468974	9472524	.	-	.	source_transcript=hg002_chrY_paternal_211.1;source_transcript_name=hg002_chrY_paternal_211.1;source_gene=hg002_chrY_paternal_211;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_211;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_211.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_211.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG03009_ch_T0000353;gene_id=HG03009_ch_G0000132;Parent=HG03009_ch_T0000353;transcript_name=hg002_chrY_paternal_211.1;gene_name=FAM197Y3;ID=intron:HG03009_ch_T0000353:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9472525	9472683	.	-	.	source_transcript=hg002_chrY_paternal_211.1;source_transcript_name=hg002_chrY_paternal_211.1;source_gene=hg002_chrY_paternal_211;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_211;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_211.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_211.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG03009_ch_T0000353;gene_id=HG03009_ch_G0000132;Parent=HG03009_ch_T0000353;transcript_name=hg002_chrY_paternal_211.1;gene_name=FAM197Y3;ID=exon:HG03009_ch_T0000353:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9472684	9474187	.	-	.	source_transcript=hg002_chrY_paternal_211.1;source_transcript_name=hg002_chrY_paternal_211.1;source_gene=hg002_chrY_paternal_211;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_211;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_211.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_211.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG03009_ch_T0000353;gene_id=HG03009_ch_G0000132;Parent=HG03009_ch_T0000353;transcript_name=hg002_chrY_paternal_211.1;gene_name=FAM197Y3;ID=intron:HG03009_ch_T0000353:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9474188	9474333	.	-	.	source_transcript=hg002_chrY_paternal_211.1;source_transcript_name=hg002_chrY_paternal_211.1;source_gene=hg002_chrY_paternal_211;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_211;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_211.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_211.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG03009_ch_T0000353;gene_id=HG03009_ch_G0000132;Parent=HG03009_ch_T0000353;transcript_name=hg002_chrY_paternal_211.1;gene_name=FAM197Y3;ID=exon:HG03009_ch_T0000353:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9474334	9474419	.	-	.	source_transcript=hg002_chrY_paternal_211.1;source_transcript_name=hg002_chrY_paternal_211.1;source_gene=hg002_chrY_paternal_211;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_211;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_211.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_211.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG03009_ch_T0000353;gene_id=HG03009_ch_G0000132;Parent=HG03009_ch_T0000353;transcript_name=hg002_chrY_paternal_211.1;gene_name=FAM197Y3;ID=intron:HG03009_ch_T0000353:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9474420	9474521	.	-	.	source_transcript=hg002_chrY_paternal_211.1;source_transcript_name=hg002_chrY_paternal_211.1;source_gene=hg002_chrY_paternal_211;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_211;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_211.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_211.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG03009_ch_T0000353;gene_id=HG03009_ch_G0000132;Parent=HG03009_ch_T0000353;transcript_name=hg002_chrY_paternal_211.1;gene_name=FAM197Y3;ID=exon:HG03009_ch_T0000353:3;Name=FAM197Y3;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	9477130	9479926	.	+	.	source_gene_common_name=TSPY3;source_gene=hg002_chrY_paternal_204;alternative_source_transcripts=hg002_chrY_paternal_228.1,hg002_chrY_paternal_228.1;gene_id=HG03009_ch_G0000133;gene_biotype=protein_coding;gene_name=TSPY3;gene_sources=liftoff;ID=HG03009_ch_G0000133;Name=TSPY3
HG03009_chrY	CAT	transcript	9477130	9479926	100	+	.	source_transcript=hg002_chrY_paternal_204.1;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_228.1,hg002_chrY_paternal_228.1;transcript_id=HG03009_ch_T0000354;gene_id=HG03009_ch_G0000133;Parent=HG03009_ch_G0000133;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=HG03009_ch_T0000354;Name=TSPY3
HG03009_chrY	CAT	exon	9477130	9477661	.	+	.	source_transcript=hg002_chrY_paternal_204.1;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_228.1,hg002_chrY_paternal_228.1;transcript_id=HG03009_ch_T0000354;gene_id=HG03009_ch_G0000133;Parent=HG03009_ch_T0000354;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=exon:HG03009_ch_T0000354:0;Name=TSPY3;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9477176	9477661	.	+	0	source_transcript=hg002_chrY_paternal_204.1;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_228.1,hg002_chrY_paternal_228.1;transcript_id=HG03009_ch_T0000354;gene_id=HG03009_ch_G0000133;Parent=HG03009_ch_T0000354;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=CDS:HG03009_ch_T0000354:0;Name=TSPY3;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	9477176	9477178	.	+	0	source_transcript=hg002_chrY_paternal_204.1;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_228.1,hg002_chrY_paternal_228.1;transcript_id=HG03009_ch_T0000354;gene_id=HG03009_ch_G0000133;Parent=HG03009_ch_T0000354;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=start_codon:HG03009_ch_T0000354;Name=TSPY3;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9477662	9478268	.	+	.	source_transcript=hg002_chrY_paternal_204.1;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_228.1,hg002_chrY_paternal_228.1;transcript_id=HG03009_ch_T0000354;gene_id=HG03009_ch_G0000133;Parent=HG03009_ch_T0000354;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=intron:HG03009_ch_T0000354:0;Name=TSPY3;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9478269	9478346	.	+	.	source_transcript=hg002_chrY_paternal_204.1;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_228.1,hg002_chrY_paternal_228.1;transcript_id=HG03009_ch_T0000354;gene_id=HG03009_ch_G0000133;Parent=HG03009_ch_T0000354;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=exon:HG03009_ch_T0000354:1;Name=TSPY3;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9478269	9478346	.	+	0	source_transcript=hg002_chrY_paternal_204.1;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_228.1,hg002_chrY_paternal_228.1;transcript_id=HG03009_ch_T0000354;gene_id=HG03009_ch_G0000133;Parent=HG03009_ch_T0000354;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=CDS:HG03009_ch_T0000354:1;Name=TSPY3;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9478347	9478474	.	+	.	source_transcript=hg002_chrY_paternal_204.1;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_228.1,hg002_chrY_paternal_228.1;transcript_id=HG03009_ch_T0000354;gene_id=HG03009_ch_G0000133;Parent=HG03009_ch_T0000354;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=intron:HG03009_ch_T0000354:1;Name=TSPY3;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9478475	9478586	.	+	.	source_transcript=hg002_chrY_paternal_204.1;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_228.1,hg002_chrY_paternal_228.1;transcript_id=HG03009_ch_T0000354;gene_id=HG03009_ch_G0000133;Parent=HG03009_ch_T0000354;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=exon:HG03009_ch_T0000354:2;Name=TSPY3;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9478475	9478586	.	+	0	source_transcript=hg002_chrY_paternal_204.1;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_228.1,hg002_chrY_paternal_228.1;transcript_id=HG03009_ch_T0000354;gene_id=HG03009_ch_G0000133;Parent=HG03009_ch_T0000354;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=CDS:HG03009_ch_T0000354:2;Name=TSPY3;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9478587	9478687	.	+	.	source_transcript=hg002_chrY_paternal_204.1;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_228.1,hg002_chrY_paternal_228.1;transcript_id=HG03009_ch_T0000354;gene_id=HG03009_ch_G0000133;Parent=HG03009_ch_T0000354;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=intron:HG03009_ch_T0000354:2;Name=TSPY3;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9478688	9478833	.	+	.	source_transcript=hg002_chrY_paternal_204.1;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_228.1,hg002_chrY_paternal_228.1;transcript_id=HG03009_ch_T0000354;gene_id=HG03009_ch_G0000133;Parent=HG03009_ch_T0000354;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=exon:HG03009_ch_T0000354:3;Name=TSPY3;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9478688	9478833	.	+	2	source_transcript=hg002_chrY_paternal_204.1;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_228.1,hg002_chrY_paternal_228.1;transcript_id=HG03009_ch_T0000354;gene_id=HG03009_ch_G0000133;Parent=HG03009_ch_T0000354;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=CDS:HG03009_ch_T0000354:3;Name=TSPY3;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9478834	9478939	.	+	.	source_transcript=hg002_chrY_paternal_204.1;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_228.1,hg002_chrY_paternal_228.1;transcript_id=HG03009_ch_T0000354;gene_id=HG03009_ch_G0000133;Parent=HG03009_ch_T0000354;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=intron:HG03009_ch_T0000354:3;Name=TSPY3;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9478940	9479021	.	+	.	source_transcript=hg002_chrY_paternal_204.1;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_228.1,hg002_chrY_paternal_228.1;transcript_id=HG03009_ch_T0000354;gene_id=HG03009_ch_G0000133;Parent=HG03009_ch_T0000354;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=exon:HG03009_ch_T0000354:4;Name=TSPY3;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9478940	9479021	.	+	0	source_transcript=hg002_chrY_paternal_204.1;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_228.1,hg002_chrY_paternal_228.1;transcript_id=HG03009_ch_T0000354;gene_id=HG03009_ch_G0000133;Parent=HG03009_ch_T0000354;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=CDS:HG03009_ch_T0000354:4;Name=TSPY3;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9479022	9479715	.	+	.	source_transcript=hg002_chrY_paternal_204.1;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_228.1,hg002_chrY_paternal_228.1;transcript_id=HG03009_ch_T0000354;gene_id=HG03009_ch_G0000133;Parent=HG03009_ch_T0000354;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=intron:HG03009_ch_T0000354:4;Name=TSPY3;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9479716	9479926	.	+	.	source_transcript=hg002_chrY_paternal_204.1;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_228.1,hg002_chrY_paternal_228.1;transcript_id=HG03009_ch_T0000354;gene_id=HG03009_ch_G0000133;Parent=HG03009_ch_T0000354;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=exon:HG03009_ch_T0000354:5;Name=TSPY3;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9479716	9479738	.	+	2	source_transcript=hg002_chrY_paternal_204.1;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_228.1,hg002_chrY_paternal_228.1;transcript_id=HG03009_ch_T0000354;gene_id=HG03009_ch_G0000133;Parent=HG03009_ch_T0000354;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=CDS:HG03009_ch_T0000354:5;Name=TSPY3;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	9479736	9479738	.	+	0	source_transcript=hg002_chrY_paternal_204.1;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_228.1,hg002_chrY_paternal_228.1;transcript_id=HG03009_ch_T0000354;gene_id=HG03009_ch_G0000133;Parent=HG03009_ch_T0000354;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=stop_codon:HG03009_ch_T0000354;Name=TSPY3;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	9477130	9479926	100	+	.	source_transcript=hg002_chrY_paternal_204.2;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_228.2,hg002_chrY_paternal_228.2;transcript_id=HG03009_ch_T0000355;gene_id=HG03009_ch_G0000133;Parent=HG03009_ch_G0000133;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=HG03009_ch_T0000355;Name=TSPY3
HG03009_chrY	CAT	exon	9477130	9477661	.	+	.	source_transcript=hg002_chrY_paternal_204.2;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_228.2,hg002_chrY_paternal_228.2;transcript_id=HG03009_ch_T0000355;gene_id=HG03009_ch_G0000133;Parent=HG03009_ch_T0000355;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=exon:HG03009_ch_T0000355:0;Name=TSPY3;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9477176	9477661	.	+	0	source_transcript=hg002_chrY_paternal_204.2;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_228.2,hg002_chrY_paternal_228.2;transcript_id=HG03009_ch_T0000355;gene_id=HG03009_ch_G0000133;Parent=HG03009_ch_T0000355;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=CDS:HG03009_ch_T0000355:0;Name=TSPY3;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	9477176	9477178	.	+	0	source_transcript=hg002_chrY_paternal_204.2;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_228.2,hg002_chrY_paternal_228.2;transcript_id=HG03009_ch_T0000355;gene_id=HG03009_ch_G0000133;Parent=HG03009_ch_T0000355;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=start_codon:HG03009_ch_T0000355;Name=TSPY3;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9477662	9478268	.	+	.	source_transcript=hg002_chrY_paternal_204.2;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_228.2,hg002_chrY_paternal_228.2;transcript_id=HG03009_ch_T0000355;gene_id=HG03009_ch_G0000133;Parent=HG03009_ch_T0000355;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=intron:HG03009_ch_T0000355:0;Name=TSPY3;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9478269	9478346	.	+	.	source_transcript=hg002_chrY_paternal_204.2;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_228.2,hg002_chrY_paternal_228.2;transcript_id=HG03009_ch_T0000355;gene_id=HG03009_ch_G0000133;Parent=HG03009_ch_T0000355;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=exon:HG03009_ch_T0000355:1;Name=TSPY3;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9478269	9478346	.	+	0	source_transcript=hg002_chrY_paternal_204.2;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_228.2,hg002_chrY_paternal_228.2;transcript_id=HG03009_ch_T0000355;gene_id=HG03009_ch_G0000133;Parent=HG03009_ch_T0000355;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=CDS:HG03009_ch_T0000355:1;Name=TSPY3;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9478347	9478474	.	+	.	source_transcript=hg002_chrY_paternal_204.2;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_228.2,hg002_chrY_paternal_228.2;transcript_id=HG03009_ch_T0000355;gene_id=HG03009_ch_G0000133;Parent=HG03009_ch_T0000355;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=intron:HG03009_ch_T0000355:1;Name=TSPY3;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9478475	9478586	.	+	.	source_transcript=hg002_chrY_paternal_204.2;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_228.2,hg002_chrY_paternal_228.2;transcript_id=HG03009_ch_T0000355;gene_id=HG03009_ch_G0000133;Parent=HG03009_ch_T0000355;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=exon:HG03009_ch_T0000355:2;Name=TSPY3;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9478475	9478586	.	+	0	source_transcript=hg002_chrY_paternal_204.2;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_228.2,hg002_chrY_paternal_228.2;transcript_id=HG03009_ch_T0000355;gene_id=HG03009_ch_G0000133;Parent=HG03009_ch_T0000355;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=CDS:HG03009_ch_T0000355:2;Name=TSPY3;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9478587	9478687	.	+	.	source_transcript=hg002_chrY_paternal_204.2;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_228.2,hg002_chrY_paternal_228.2;transcript_id=HG03009_ch_T0000355;gene_id=HG03009_ch_G0000133;Parent=HG03009_ch_T0000355;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=intron:HG03009_ch_T0000355:2;Name=TSPY3;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9478688	9478833	.	+	.	source_transcript=hg002_chrY_paternal_204.2;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_228.2,hg002_chrY_paternal_228.2;transcript_id=HG03009_ch_T0000355;gene_id=HG03009_ch_G0000133;Parent=HG03009_ch_T0000355;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=exon:HG03009_ch_T0000355:3;Name=TSPY3;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9478688	9478833	.	+	2	source_transcript=hg002_chrY_paternal_204.2;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_228.2,hg002_chrY_paternal_228.2;transcript_id=HG03009_ch_T0000355;gene_id=HG03009_ch_G0000133;Parent=HG03009_ch_T0000355;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=CDS:HG03009_ch_T0000355:3;Name=TSPY3;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9478834	9478928	.	+	.	source_transcript=hg002_chrY_paternal_204.2;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_228.2,hg002_chrY_paternal_228.2;transcript_id=HG03009_ch_T0000355;gene_id=HG03009_ch_G0000133;Parent=HG03009_ch_T0000355;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=intron:HG03009_ch_T0000355:3;Name=TSPY3;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9478929	9479021	.	+	.	source_transcript=hg002_chrY_paternal_204.2;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_228.2,hg002_chrY_paternal_228.2;transcript_id=HG03009_ch_T0000355;gene_id=HG03009_ch_G0000133;Parent=HG03009_ch_T0000355;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=exon:HG03009_ch_T0000355:4;Name=TSPY3;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9478929	9478991	.	+	0	source_transcript=hg002_chrY_paternal_204.2;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_228.2,hg002_chrY_paternal_228.2;transcript_id=HG03009_ch_T0000355;gene_id=HG03009_ch_G0000133;Parent=HG03009_ch_T0000355;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=CDS:HG03009_ch_T0000355:4;Name=TSPY3;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	9478989	9478991	.	+	0	source_transcript=hg002_chrY_paternal_204.2;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_228.2,hg002_chrY_paternal_228.2;transcript_id=HG03009_ch_T0000355;gene_id=HG03009_ch_G0000133;Parent=HG03009_ch_T0000355;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=stop_codon:HG03009_ch_T0000355;Name=TSPY3;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9479022	9479715	.	+	.	source_transcript=hg002_chrY_paternal_204.2;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_228.2,hg002_chrY_paternal_228.2;transcript_id=HG03009_ch_T0000355;gene_id=HG03009_ch_G0000133;Parent=HG03009_ch_T0000355;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=intron:HG03009_ch_T0000355:4;Name=TSPY3;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9479716	9479926	.	+	.	source_transcript=hg002_chrY_paternal_204.2;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_228.2,hg002_chrY_paternal_228.2;transcript_id=HG03009_ch_T0000355;gene_id=HG03009_ch_G0000133;Parent=HG03009_ch_T0000355;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=exon:HG03009_ch_T0000355:5;Name=TSPY3;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	9477130	9479926	100	+	.	source_transcript=hg002_chrY_paternal_204.3;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_228.3,hg002_chrY_paternal_228.3;transcript_id=HG03009_ch_T0000356;gene_id=HG03009_ch_G0000133;Parent=HG03009_ch_G0000133;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=HG03009_ch_T0000356;Name=TSPY3
HG03009_chrY	CAT	exon	9477130	9477661	.	+	.	source_transcript=hg002_chrY_paternal_204.3;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_228.3,hg002_chrY_paternal_228.3;transcript_id=HG03009_ch_T0000356;gene_id=HG03009_ch_G0000133;Parent=HG03009_ch_T0000356;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=exon:HG03009_ch_T0000356:0;Name=TSPY3;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9477176	9477661	.	+	0	source_transcript=hg002_chrY_paternal_204.3;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_228.3,hg002_chrY_paternal_228.3;transcript_id=HG03009_ch_T0000356;gene_id=HG03009_ch_G0000133;Parent=HG03009_ch_T0000356;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=CDS:HG03009_ch_T0000356:0;Name=TSPY3;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	9477176	9477178	.	+	0	source_transcript=hg002_chrY_paternal_204.3;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_228.3,hg002_chrY_paternal_228.3;transcript_id=HG03009_ch_T0000356;gene_id=HG03009_ch_G0000133;Parent=HG03009_ch_T0000356;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=start_codon:HG03009_ch_T0000356;Name=TSPY3;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9477662	9478268	.	+	.	source_transcript=hg002_chrY_paternal_204.3;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_228.3,hg002_chrY_paternal_228.3;transcript_id=HG03009_ch_T0000356;gene_id=HG03009_ch_G0000133;Parent=HG03009_ch_T0000356;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=intron:HG03009_ch_T0000356:0;Name=TSPY3;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9478269	9478346	.	+	.	source_transcript=hg002_chrY_paternal_204.3;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_228.3,hg002_chrY_paternal_228.3;transcript_id=HG03009_ch_T0000356;gene_id=HG03009_ch_G0000133;Parent=HG03009_ch_T0000356;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=exon:HG03009_ch_T0000356:1;Name=TSPY3;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9478269	9478346	.	+	0	source_transcript=hg002_chrY_paternal_204.3;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_228.3,hg002_chrY_paternal_228.3;transcript_id=HG03009_ch_T0000356;gene_id=HG03009_ch_G0000133;Parent=HG03009_ch_T0000356;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=CDS:HG03009_ch_T0000356:1;Name=TSPY3;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9478347	9478474	.	+	.	source_transcript=hg002_chrY_paternal_204.3;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_228.3,hg002_chrY_paternal_228.3;transcript_id=HG03009_ch_T0000356;gene_id=HG03009_ch_G0000133;Parent=HG03009_ch_T0000356;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=intron:HG03009_ch_T0000356:1;Name=TSPY3;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9478475	9478586	.	+	.	source_transcript=hg002_chrY_paternal_204.3;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_228.3,hg002_chrY_paternal_228.3;transcript_id=HG03009_ch_T0000356;gene_id=HG03009_ch_G0000133;Parent=HG03009_ch_T0000356;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=exon:HG03009_ch_T0000356:2;Name=TSPY3;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9478475	9478586	.	+	0	source_transcript=hg002_chrY_paternal_204.3;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_228.3,hg002_chrY_paternal_228.3;transcript_id=HG03009_ch_T0000356;gene_id=HG03009_ch_G0000133;Parent=HG03009_ch_T0000356;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=CDS:HG03009_ch_T0000356:2;Name=TSPY3;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9478587	9478694	.	+	.	source_transcript=hg002_chrY_paternal_204.3;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_228.3,hg002_chrY_paternal_228.3;transcript_id=HG03009_ch_T0000356;gene_id=HG03009_ch_G0000133;Parent=HG03009_ch_T0000356;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=intron:HG03009_ch_T0000356:2;Name=TSPY3;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9478695	9478833	.	+	.	source_transcript=hg002_chrY_paternal_204.3;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_228.3,hg002_chrY_paternal_228.3;transcript_id=HG03009_ch_T0000356;gene_id=HG03009_ch_G0000133;Parent=HG03009_ch_T0000356;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=exon:HG03009_ch_T0000356:3;Name=TSPY3;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9478695	9478833	.	+	2	source_transcript=hg002_chrY_paternal_204.3;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_228.3,hg002_chrY_paternal_228.3;transcript_id=HG03009_ch_T0000356;gene_id=HG03009_ch_G0000133;Parent=HG03009_ch_T0000356;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=CDS:HG03009_ch_T0000356:3;Name=TSPY3;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9478834	9478939	.	+	.	source_transcript=hg002_chrY_paternal_204.3;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_228.3,hg002_chrY_paternal_228.3;transcript_id=HG03009_ch_T0000356;gene_id=HG03009_ch_G0000133;Parent=HG03009_ch_T0000356;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=intron:HG03009_ch_T0000356:3;Name=TSPY3;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9478940	9479021	.	+	.	source_transcript=hg002_chrY_paternal_204.3;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_228.3,hg002_chrY_paternal_228.3;transcript_id=HG03009_ch_T0000356;gene_id=HG03009_ch_G0000133;Parent=HG03009_ch_T0000356;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=exon:HG03009_ch_T0000356:4;Name=TSPY3;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9478940	9478991	.	+	1	source_transcript=hg002_chrY_paternal_204.3;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_228.3,hg002_chrY_paternal_228.3;transcript_id=HG03009_ch_T0000356;gene_id=HG03009_ch_G0000133;Parent=HG03009_ch_T0000356;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=CDS:HG03009_ch_T0000356:4;Name=TSPY3;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	9478989	9478991	.	+	0	source_transcript=hg002_chrY_paternal_204.3;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_228.3,hg002_chrY_paternal_228.3;transcript_id=HG03009_ch_T0000356;gene_id=HG03009_ch_G0000133;Parent=HG03009_ch_T0000356;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=stop_codon:HG03009_ch_T0000356;Name=TSPY3;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9479022	9479715	.	+	.	source_transcript=hg002_chrY_paternal_204.3;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_228.3,hg002_chrY_paternal_228.3;transcript_id=HG03009_ch_T0000356;gene_id=HG03009_ch_G0000133;Parent=HG03009_ch_T0000356;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=intron:HG03009_ch_T0000356:4;Name=TSPY3;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9479716	9479926	.	+	.	source_transcript=hg002_chrY_paternal_204.3;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_228.3,hg002_chrY_paternal_228.3;transcript_id=HG03009_ch_T0000356;gene_id=HG03009_ch_G0000133;Parent=HG03009_ch_T0000356;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=exon:HG03009_ch_T0000356:5;Name=TSPY3;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	9477130	9479926	1000	+	.	source_transcript=hg002_chrY_paternal_204.4;source_transcript_name=hg002_chrY_paternal_204.1;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_204.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_228.4,hg002_chrY_paternal_228.4;transcript_id=HG03009_ch_T0000357;gene_id=HG03009_ch_G0000133;Parent=HG03009_ch_G0000133;transcript_name=hg002_chrY_paternal_204.1;gene_name=TSPY3;ID=HG03009_ch_T0000357;Name=TSPY3
HG03009_chrY	CAT	exon	9477130	9477661	.	+	.	source_transcript=hg002_chrY_paternal_204.4;source_transcript_name=hg002_chrY_paternal_204.1;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_204.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_228.4,hg002_chrY_paternal_228.4;transcript_id=HG03009_ch_T0000357;gene_id=HG03009_ch_G0000133;Parent=HG03009_ch_T0000357;transcript_name=hg002_chrY_paternal_204.1;gene_name=TSPY3;ID=exon:HG03009_ch_T0000357:0;Name=TSPY3;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9477662	9478268	.	+	.	source_transcript=hg002_chrY_paternal_204.4;source_transcript_name=hg002_chrY_paternal_204.1;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_204.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_228.4,hg002_chrY_paternal_228.4;transcript_id=HG03009_ch_T0000357;gene_id=HG03009_ch_G0000133;Parent=HG03009_ch_T0000357;transcript_name=hg002_chrY_paternal_204.1;gene_name=TSPY3;ID=intron:HG03009_ch_T0000357:0;Name=TSPY3;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9478269	9478346	.	+	.	source_transcript=hg002_chrY_paternal_204.4;source_transcript_name=hg002_chrY_paternal_204.1;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_204.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_228.4,hg002_chrY_paternal_228.4;transcript_id=HG03009_ch_T0000357;gene_id=HG03009_ch_G0000133;Parent=HG03009_ch_T0000357;transcript_name=hg002_chrY_paternal_204.1;gene_name=TSPY3;ID=exon:HG03009_ch_T0000357:1;Name=TSPY3;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9478347	9478474	.	+	.	source_transcript=hg002_chrY_paternal_204.4;source_transcript_name=hg002_chrY_paternal_204.1;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_204.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_228.4,hg002_chrY_paternal_228.4;transcript_id=HG03009_ch_T0000357;gene_id=HG03009_ch_G0000133;Parent=HG03009_ch_T0000357;transcript_name=hg002_chrY_paternal_204.1;gene_name=TSPY3;ID=intron:HG03009_ch_T0000357:1;Name=TSPY3;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9478475	9478586	.	+	.	source_transcript=hg002_chrY_paternal_204.4;source_transcript_name=hg002_chrY_paternal_204.1;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_204.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_228.4,hg002_chrY_paternal_228.4;transcript_id=HG03009_ch_T0000357;gene_id=HG03009_ch_G0000133;Parent=HG03009_ch_T0000357;transcript_name=hg002_chrY_paternal_204.1;gene_name=TSPY3;ID=exon:HG03009_ch_T0000357:2;Name=TSPY3;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9478587	9478694	.	+	.	source_transcript=hg002_chrY_paternal_204.4;source_transcript_name=hg002_chrY_paternal_204.1;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_204.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_228.4,hg002_chrY_paternal_228.4;transcript_id=HG03009_ch_T0000357;gene_id=HG03009_ch_G0000133;Parent=HG03009_ch_T0000357;transcript_name=hg002_chrY_paternal_204.1;gene_name=TSPY3;ID=intron:HG03009_ch_T0000357:2;Name=TSPY3;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9478695	9478833	.	+	.	source_transcript=hg002_chrY_paternal_204.4;source_transcript_name=hg002_chrY_paternal_204.1;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_204.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_228.4,hg002_chrY_paternal_228.4;transcript_id=HG03009_ch_T0000357;gene_id=HG03009_ch_G0000133;Parent=HG03009_ch_T0000357;transcript_name=hg002_chrY_paternal_204.1;gene_name=TSPY3;ID=exon:HG03009_ch_T0000357:3;Name=TSPY3;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9478834	9478928	.	+	.	source_transcript=hg002_chrY_paternal_204.4;source_transcript_name=hg002_chrY_paternal_204.1;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_204.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_228.4,hg002_chrY_paternal_228.4;transcript_id=HG03009_ch_T0000357;gene_id=HG03009_ch_G0000133;Parent=HG03009_ch_T0000357;transcript_name=hg002_chrY_paternal_204.1;gene_name=TSPY3;ID=intron:HG03009_ch_T0000357:3;Name=TSPY3;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9478929	9479021	.	+	.	source_transcript=hg002_chrY_paternal_204.4;source_transcript_name=hg002_chrY_paternal_204.1;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_204.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_228.4,hg002_chrY_paternal_228.4;transcript_id=HG03009_ch_T0000357;gene_id=HG03009_ch_G0000133;Parent=HG03009_ch_T0000357;transcript_name=hg002_chrY_paternal_204.1;gene_name=TSPY3;ID=exon:HG03009_ch_T0000357:4;Name=TSPY3;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9479022	9479715	.	+	.	source_transcript=hg002_chrY_paternal_204.4;source_transcript_name=hg002_chrY_paternal_204.1;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_204.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_228.4,hg002_chrY_paternal_228.4;transcript_id=HG03009_ch_T0000357;gene_id=HG03009_ch_G0000133;Parent=HG03009_ch_T0000357;transcript_name=hg002_chrY_paternal_204.1;gene_name=TSPY3;ID=intron:HG03009_ch_T0000357:4;Name=TSPY3;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9479716	9479926	.	+	.	source_transcript=hg002_chrY_paternal_204.4;source_transcript_name=hg002_chrY_paternal_204.1;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_204.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_228.4,hg002_chrY_paternal_228.4;transcript_id=HG03009_ch_T0000357;gene_id=HG03009_ch_G0000133;Parent=HG03009_ch_T0000357;transcript_name=hg002_chrY_paternal_204.1;gene_name=TSPY3;ID=exon:HG03009_ch_T0000357:5;Name=TSPY3;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	9489196	9494877	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_185;alternative_source_transcripts=hg002_chrY_paternal_229.1,hg002_chrY_paternal_229.1;gene_id=HG03009_ch_G0000134;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=HG03009_ch_G0000134;Name=FAM197Y2
HG03009_chrY	CAT	transcript	9489196	9494877	1000	-	.	source_transcript=hg002_chrY_paternal_185.1;source_transcript_name=hg002_chrY_paternal_185.1;source_gene=hg002_chrY_paternal_185;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_185;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_185.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_185.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_229.1,hg002_chrY_paternal_229.1;transcript_id=HG03009_ch_T0000358;gene_id=HG03009_ch_G0000134;Parent=HG03009_ch_G0000134;transcript_name=hg002_chrY_paternal_185.1;gene_name=FAM197Y2;ID=HG03009_ch_T0000358;Name=FAM197Y2
HG03009_chrY	CAT	exon	9489196	9489255	.	-	.	source_transcript=hg002_chrY_paternal_185.1;source_transcript_name=hg002_chrY_paternal_185.1;source_gene=hg002_chrY_paternal_185;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_185;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_185.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_185.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_229.1,hg002_chrY_paternal_229.1;transcript_id=HG03009_ch_T0000358;gene_id=HG03009_ch_G0000134;Parent=HG03009_ch_T0000358;transcript_name=hg002_chrY_paternal_185.1;gene_name=FAM197Y2;ID=exon:HG03009_ch_T0000358:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9489256	9492803	.	-	.	source_transcript=hg002_chrY_paternal_185.1;source_transcript_name=hg002_chrY_paternal_185.1;source_gene=hg002_chrY_paternal_185;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_185;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_185.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_185.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_229.1,hg002_chrY_paternal_229.1;transcript_id=HG03009_ch_T0000358;gene_id=HG03009_ch_G0000134;Parent=HG03009_ch_T0000358;transcript_name=hg002_chrY_paternal_185.1;gene_name=FAM197Y2;ID=intron:HG03009_ch_T0000358:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9492804	9492962	.	-	.	source_transcript=hg002_chrY_paternal_185.1;source_transcript_name=hg002_chrY_paternal_185.1;source_gene=hg002_chrY_paternal_185;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_185;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_185.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_185.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_229.1,hg002_chrY_paternal_229.1;transcript_id=HG03009_ch_T0000358;gene_id=HG03009_ch_G0000134;Parent=HG03009_ch_T0000358;transcript_name=hg002_chrY_paternal_185.1;gene_name=FAM197Y2;ID=exon:HG03009_ch_T0000358:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9492963	9494454	.	-	.	source_transcript=hg002_chrY_paternal_185.1;source_transcript_name=hg002_chrY_paternal_185.1;source_gene=hg002_chrY_paternal_185;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_185;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_185.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_185.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_229.1,hg002_chrY_paternal_229.1;transcript_id=HG03009_ch_T0000358;gene_id=HG03009_ch_G0000134;Parent=HG03009_ch_T0000358;transcript_name=hg002_chrY_paternal_185.1;gene_name=FAM197Y2;ID=intron:HG03009_ch_T0000358:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9494455	9494600	.	-	.	source_transcript=hg002_chrY_paternal_185.1;source_transcript_name=hg002_chrY_paternal_185.1;source_gene=hg002_chrY_paternal_185;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_185;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_185.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_185.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_229.1,hg002_chrY_paternal_229.1;transcript_id=HG03009_ch_T0000358;gene_id=HG03009_ch_G0000134;Parent=HG03009_ch_T0000358;transcript_name=hg002_chrY_paternal_185.1;gene_name=FAM197Y2;ID=exon:HG03009_ch_T0000358:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9494601	9494686	.	-	.	source_transcript=hg002_chrY_paternal_185.1;source_transcript_name=hg002_chrY_paternal_185.1;source_gene=hg002_chrY_paternal_185;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_185;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_185.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_185.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_229.1,hg002_chrY_paternal_229.1;transcript_id=HG03009_ch_T0000358;gene_id=HG03009_ch_G0000134;Parent=HG03009_ch_T0000358;transcript_name=hg002_chrY_paternal_185.1;gene_name=FAM197Y2;ID=intron:HG03009_ch_T0000358:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9494687	9494877	.	-	.	source_transcript=hg002_chrY_paternal_185.1;source_transcript_name=hg002_chrY_paternal_185.1;source_gene=hg002_chrY_paternal_185;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_185;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_185.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_185.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_229.1,hg002_chrY_paternal_229.1;transcript_id=HG03009_ch_T0000358;gene_id=HG03009_ch_G0000134;Parent=HG03009_ch_T0000358;transcript_name=hg002_chrY_paternal_185.1;gene_name=FAM197Y2;ID=exon:HG03009_ch_T0000358:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	9497402	9500198	.	+	.	source_gene_common_name=TSPY1;source_gene=hg002_chrY_paternal_230;alternative_source_transcripts=hg002_chrY_paternal_230.1,hg002_chrY_paternal_230.1;gene_id=HG03009_ch_G0000135;gene_biotype=protein_coding;gene_name=TSPY1;gene_sources=liftoff,augTM;ID=HG03009_ch_G0000135;Name=TSPY1
HG03009_chrY	CAT	transcript	9497402	9500198	100	+	.	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.1,hg002_chrY_paternal_230.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000359;gene_id=HG03009_ch_G0000135;Parent=HG03009_ch_G0000135;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=HG03009_ch_T0000359;Name=TSPY1
HG03009_chrY	CAT	exon	9497402	9497933	.	+	.	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.1,hg002_chrY_paternal_230.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000359;gene_id=HG03009_ch_G0000135;Parent=HG03009_ch_T0000359;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000359:0;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9497448	9497933	.	+	0	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.1,hg002_chrY_paternal_230.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000359;gene_id=HG03009_ch_G0000135;Parent=HG03009_ch_T0000359;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000359:0;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	9497448	9497450	.	+	0	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.1,hg002_chrY_paternal_230.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000359;gene_id=HG03009_ch_G0000135;Parent=HG03009_ch_T0000359;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=start_codon:HG03009_ch_T0000359;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9497934	9498540	.	+	.	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.1,hg002_chrY_paternal_230.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000359;gene_id=HG03009_ch_G0000135;Parent=HG03009_ch_T0000359;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000359:0;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9498541	9498618	.	+	.	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.1,hg002_chrY_paternal_230.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000359;gene_id=HG03009_ch_G0000135;Parent=HG03009_ch_T0000359;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000359:1;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9498541	9498618	.	+	0	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.1,hg002_chrY_paternal_230.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000359;gene_id=HG03009_ch_G0000135;Parent=HG03009_ch_T0000359;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000359:1;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9498619	9498746	.	+	.	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.1,hg002_chrY_paternal_230.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000359;gene_id=HG03009_ch_G0000135;Parent=HG03009_ch_T0000359;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000359:1;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9498747	9498858	.	+	.	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.1,hg002_chrY_paternal_230.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000359;gene_id=HG03009_ch_G0000135;Parent=HG03009_ch_T0000359;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000359:2;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9498747	9498858	.	+	0	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.1,hg002_chrY_paternal_230.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000359;gene_id=HG03009_ch_G0000135;Parent=HG03009_ch_T0000359;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000359:2;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9498859	9498959	.	+	.	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.1,hg002_chrY_paternal_230.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000359;gene_id=HG03009_ch_G0000135;Parent=HG03009_ch_T0000359;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000359:2;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9498960	9499105	.	+	.	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.1,hg002_chrY_paternal_230.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000359;gene_id=HG03009_ch_G0000135;Parent=HG03009_ch_T0000359;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000359:3;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9498960	9499105	.	+	2	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.1,hg002_chrY_paternal_230.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000359;gene_id=HG03009_ch_G0000135;Parent=HG03009_ch_T0000359;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000359:3;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9499106	9499200	.	+	.	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.1,hg002_chrY_paternal_230.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000359;gene_id=HG03009_ch_G0000135;Parent=HG03009_ch_T0000359;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000359:3;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9499201	9499293	.	+	.	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.1,hg002_chrY_paternal_230.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000359;gene_id=HG03009_ch_G0000135;Parent=HG03009_ch_T0000359;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000359:4;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9499201	9499263	.	+	0	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.1,hg002_chrY_paternal_230.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000359;gene_id=HG03009_ch_G0000135;Parent=HG03009_ch_T0000359;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000359:4;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	9499261	9499263	.	+	0	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.1,hg002_chrY_paternal_230.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000359;gene_id=HG03009_ch_G0000135;Parent=HG03009_ch_T0000359;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=stop_codon:HG03009_ch_T0000359;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9499294	9499987	.	+	.	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.1,hg002_chrY_paternal_230.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000359;gene_id=HG03009_ch_G0000135;Parent=HG03009_ch_T0000359;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000359:4;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9499988	9500198	.	+	.	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.1,hg002_chrY_paternal_230.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000359;gene_id=HG03009_ch_G0000135;Parent=HG03009_ch_T0000359;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000359:5;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	9497402	9500198	100	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2,hg002_chrY_paternal_230.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000360;gene_id=HG03009_ch_G0000135;Parent=HG03009_ch_G0000135;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=HG03009_ch_T0000360;Name=TSPY1
HG03009_chrY	CAT	exon	9497402	9497534	.	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2,hg002_chrY_paternal_230.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000360;gene_id=HG03009_ch_G0000135;Parent=HG03009_ch_T0000360;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000360:0;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9497448	9497534	.	+	0	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2,hg002_chrY_paternal_230.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000360;gene_id=HG03009_ch_G0000135;Parent=HG03009_ch_T0000360;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000360:0;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	9497448	9497450	.	+	0	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2,hg002_chrY_paternal_230.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000360;gene_id=HG03009_ch_G0000135;Parent=HG03009_ch_T0000360;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=start_codon:HG03009_ch_T0000360;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9497535	9497795	.	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2,hg002_chrY_paternal_230.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000360;gene_id=HG03009_ch_G0000135;Parent=HG03009_ch_T0000360;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000360:0;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9497796	9497933	.	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2,hg002_chrY_paternal_230.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000360;gene_id=HG03009_ch_G0000135;Parent=HG03009_ch_T0000360;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000360:1;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9497796	9497933	.	+	0	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2,hg002_chrY_paternal_230.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000360;gene_id=HG03009_ch_G0000135;Parent=HG03009_ch_T0000360;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000360:1;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9497934	9498540	.	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2,hg002_chrY_paternal_230.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000360;gene_id=HG03009_ch_G0000135;Parent=HG03009_ch_T0000360;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000360:1;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9498541	9498618	.	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2,hg002_chrY_paternal_230.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000360;gene_id=HG03009_ch_G0000135;Parent=HG03009_ch_T0000360;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000360:2;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9498541	9498618	.	+	0	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2,hg002_chrY_paternal_230.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000360;gene_id=HG03009_ch_G0000135;Parent=HG03009_ch_T0000360;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000360:2;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9498619	9498746	.	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2,hg002_chrY_paternal_230.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000360;gene_id=HG03009_ch_G0000135;Parent=HG03009_ch_T0000360;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000360:2;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9498747	9498858	.	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2,hg002_chrY_paternal_230.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000360;gene_id=HG03009_ch_G0000135;Parent=HG03009_ch_T0000360;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000360:3;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9498747	9498858	.	+	0	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2,hg002_chrY_paternal_230.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000360;gene_id=HG03009_ch_G0000135;Parent=HG03009_ch_T0000360;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000360:3;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9498859	9498959	.	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2,hg002_chrY_paternal_230.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000360;gene_id=HG03009_ch_G0000135;Parent=HG03009_ch_T0000360;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000360:3;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9498960	9499105	.	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2,hg002_chrY_paternal_230.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000360;gene_id=HG03009_ch_G0000135;Parent=HG03009_ch_T0000360;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000360:4;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9498960	9499105	.	+	2	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2,hg002_chrY_paternal_230.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000360;gene_id=HG03009_ch_G0000135;Parent=HG03009_ch_T0000360;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000360:4;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9499106	9499211	.	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2,hg002_chrY_paternal_230.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000360;gene_id=HG03009_ch_G0000135;Parent=HG03009_ch_T0000360;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000360:4;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9499212	9499293	.	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2,hg002_chrY_paternal_230.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000360;gene_id=HG03009_ch_G0000135;Parent=HG03009_ch_T0000360;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000360:5;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9499212	9499293	.	+	0	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2,hg002_chrY_paternal_230.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000360;gene_id=HG03009_ch_G0000135;Parent=HG03009_ch_T0000360;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000360:5;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9499294	9499987	.	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2,hg002_chrY_paternal_230.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000360;gene_id=HG03009_ch_G0000135;Parent=HG03009_ch_T0000360;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000360:5;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9499988	9500198	.	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2,hg002_chrY_paternal_230.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000360;gene_id=HG03009_ch_G0000135;Parent=HG03009_ch_T0000360;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000360:6;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9499988	9500010	.	+	2	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2,hg002_chrY_paternal_230.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000360;gene_id=HG03009_ch_G0000135;Parent=HG03009_ch_T0000360;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000360:6;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	9500008	9500010	.	+	0	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2,hg002_chrY_paternal_230.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000360;gene_id=HG03009_ch_G0000135;Parent=HG03009_ch_T0000360;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=stop_codon:HG03009_ch_T0000360;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	9497402	9500198	100	+	.	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.3,hg002_chrY_paternal_230.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000361;gene_id=HG03009_ch_G0000135;Parent=HG03009_ch_G0000135;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=HG03009_ch_T0000361;Name=TSPY1
HG03009_chrY	CAT	exon	9497402	9497933	.	+	.	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.3,hg002_chrY_paternal_230.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000361;gene_id=HG03009_ch_G0000135;Parent=HG03009_ch_T0000361;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000361:0;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9497448	9497933	.	+	0	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.3,hg002_chrY_paternal_230.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000361;gene_id=HG03009_ch_G0000135;Parent=HG03009_ch_T0000361;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000361:0;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	9497448	9497450	.	+	0	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.3,hg002_chrY_paternal_230.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000361;gene_id=HG03009_ch_G0000135;Parent=HG03009_ch_T0000361;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=start_codon:HG03009_ch_T0000361;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9497934	9498540	.	+	.	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.3,hg002_chrY_paternal_230.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000361;gene_id=HG03009_ch_G0000135;Parent=HG03009_ch_T0000361;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000361:0;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9498541	9498618	.	+	.	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.3,hg002_chrY_paternal_230.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000361;gene_id=HG03009_ch_G0000135;Parent=HG03009_ch_T0000361;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000361:1;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9498541	9498618	.	+	0	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.3,hg002_chrY_paternal_230.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000361;gene_id=HG03009_ch_G0000135;Parent=HG03009_ch_T0000361;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000361:1;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9498619	9498746	.	+	.	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.3,hg002_chrY_paternal_230.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000361;gene_id=HG03009_ch_G0000135;Parent=HG03009_ch_T0000361;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000361:1;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9498747	9498858	.	+	.	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.3,hg002_chrY_paternal_230.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000361;gene_id=HG03009_ch_G0000135;Parent=HG03009_ch_T0000361;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000361:2;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9498747	9498858	.	+	0	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.3,hg002_chrY_paternal_230.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000361;gene_id=HG03009_ch_G0000135;Parent=HG03009_ch_T0000361;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000361:2;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9498859	9498959	.	+	.	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.3,hg002_chrY_paternal_230.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000361;gene_id=HG03009_ch_G0000135;Parent=HG03009_ch_T0000361;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000361:2;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9498960	9499105	.	+	.	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.3,hg002_chrY_paternal_230.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000361;gene_id=HG03009_ch_G0000135;Parent=HG03009_ch_T0000361;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000361:3;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9498960	9499105	.	+	2	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.3,hg002_chrY_paternal_230.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000361;gene_id=HG03009_ch_G0000135;Parent=HG03009_ch_T0000361;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000361:3;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9499106	9499211	.	+	.	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.3,hg002_chrY_paternal_230.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000361;gene_id=HG03009_ch_G0000135;Parent=HG03009_ch_T0000361;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000361:3;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9499212	9499293	.	+	.	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.3,hg002_chrY_paternal_230.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000361;gene_id=HG03009_ch_G0000135;Parent=HG03009_ch_T0000361;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000361:4;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9499212	9499293	.	+	0	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.3,hg002_chrY_paternal_230.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000361;gene_id=HG03009_ch_G0000135;Parent=HG03009_ch_T0000361;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000361:4;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9499294	9499987	.	+	.	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.3,hg002_chrY_paternal_230.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000361;gene_id=HG03009_ch_G0000135;Parent=HG03009_ch_T0000361;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000361:4;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9499988	9500198	.	+	.	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.3,hg002_chrY_paternal_230.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000361;gene_id=HG03009_ch_G0000135;Parent=HG03009_ch_T0000361;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000361:5;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9499988	9500010	.	+	2	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.3,hg002_chrY_paternal_230.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000361;gene_id=HG03009_ch_G0000135;Parent=HG03009_ch_T0000361;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000361:5;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	9500008	9500010	.	+	0	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.3,hg002_chrY_paternal_230.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000361;gene_id=HG03009_ch_G0000135;Parent=HG03009_ch_T0000361;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=stop_codon:HG03009_ch_T0000361;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	9497402	9500198	100	+	.	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.4,hg002_chrY_paternal_230.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000362;gene_id=HG03009_ch_G0000135;Parent=HG03009_ch_G0000135;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=HG03009_ch_T0000362;Name=TSPY1
HG03009_chrY	CAT	exon	9497402	9497933	.	+	.	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.4,hg002_chrY_paternal_230.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000362;gene_id=HG03009_ch_G0000135;Parent=HG03009_ch_T0000362;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000362:0;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9497448	9497933	.	+	0	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.4,hg002_chrY_paternal_230.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000362;gene_id=HG03009_ch_G0000135;Parent=HG03009_ch_T0000362;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000362:0;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	9497448	9497450	.	+	0	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.4,hg002_chrY_paternal_230.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000362;gene_id=HG03009_ch_G0000135;Parent=HG03009_ch_T0000362;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=start_codon:HG03009_ch_T0000362;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9497934	9498540	.	+	.	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.4,hg002_chrY_paternal_230.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000362;gene_id=HG03009_ch_G0000135;Parent=HG03009_ch_T0000362;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000362:0;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9498541	9498618	.	+	.	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.4,hg002_chrY_paternal_230.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000362;gene_id=HG03009_ch_G0000135;Parent=HG03009_ch_T0000362;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000362:1;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9498541	9498618	.	+	0	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.4,hg002_chrY_paternal_230.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000362;gene_id=HG03009_ch_G0000135;Parent=HG03009_ch_T0000362;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000362:1;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9498619	9498746	.	+	.	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.4,hg002_chrY_paternal_230.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000362;gene_id=HG03009_ch_G0000135;Parent=HG03009_ch_T0000362;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000362:1;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9498747	9498858	.	+	.	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.4,hg002_chrY_paternal_230.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000362;gene_id=HG03009_ch_G0000135;Parent=HG03009_ch_T0000362;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000362:2;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9498747	9498858	.	+	0	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.4,hg002_chrY_paternal_230.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000362;gene_id=HG03009_ch_G0000135;Parent=HG03009_ch_T0000362;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000362:2;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9498859	9498966	.	+	.	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.4,hg002_chrY_paternal_230.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000362;gene_id=HG03009_ch_G0000135;Parent=HG03009_ch_T0000362;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000362:2;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9498967	9499105	.	+	.	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.4,hg002_chrY_paternal_230.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000362;gene_id=HG03009_ch_G0000135;Parent=HG03009_ch_T0000362;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000362:3;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9498967	9499105	.	+	2	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.4,hg002_chrY_paternal_230.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000362;gene_id=HG03009_ch_G0000135;Parent=HG03009_ch_T0000362;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000362:3;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9499106	9499211	.	+	.	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.4,hg002_chrY_paternal_230.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000362;gene_id=HG03009_ch_G0000135;Parent=HG03009_ch_T0000362;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000362:3;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9499212	9499293	.	+	.	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.4,hg002_chrY_paternal_230.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000362;gene_id=HG03009_ch_G0000135;Parent=HG03009_ch_T0000362;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000362:4;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9499212	9499263	.	+	1	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.4,hg002_chrY_paternal_230.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000362;gene_id=HG03009_ch_G0000135;Parent=HG03009_ch_T0000362;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000362:4;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	9499261	9499263	.	+	0	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.4,hg002_chrY_paternal_230.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000362;gene_id=HG03009_ch_G0000135;Parent=HG03009_ch_T0000362;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=stop_codon:HG03009_ch_T0000362;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9499294	9499987	.	+	.	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.4,hg002_chrY_paternal_230.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000362;gene_id=HG03009_ch_G0000135;Parent=HG03009_ch_T0000362;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000362:4;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9499988	9500198	.	+	.	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.4,hg002_chrY_paternal_230.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000362;gene_id=HG03009_ch_G0000135;Parent=HG03009_ch_T0000362;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000362:5;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	9497402	9500198	1000	+	.	source_transcript=hg002_chrY_paternal_230.5;source_transcript_name=hg002_chrY_paternal_230.1;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_230.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.5,hg002_chrY_paternal_230.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000363;gene_id=HG03009_ch_G0000135;Parent=HG03009_ch_G0000135;transcript_name=hg002_chrY_paternal_230.1;gene_name=TSPY1;ID=HG03009_ch_T0000363;Name=TSPY1
HG03009_chrY	CAT	exon	9497402	9497933	.	+	.	source_transcript=hg002_chrY_paternal_230.5;source_transcript_name=hg002_chrY_paternal_230.1;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_230.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.5,hg002_chrY_paternal_230.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000363;gene_id=HG03009_ch_G0000135;Parent=HG03009_ch_T0000363;transcript_name=hg002_chrY_paternal_230.1;gene_name=TSPY1;ID=exon:HG03009_ch_T0000363:0;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9497934	9498540	.	+	.	source_transcript=hg002_chrY_paternal_230.5;source_transcript_name=hg002_chrY_paternal_230.1;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_230.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.5,hg002_chrY_paternal_230.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000363;gene_id=HG03009_ch_G0000135;Parent=HG03009_ch_T0000363;transcript_name=hg002_chrY_paternal_230.1;gene_name=TSPY1;ID=intron:HG03009_ch_T0000363:0;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9498541	9498618	.	+	.	source_transcript=hg002_chrY_paternal_230.5;source_transcript_name=hg002_chrY_paternal_230.1;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_230.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.5,hg002_chrY_paternal_230.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000363;gene_id=HG03009_ch_G0000135;Parent=HG03009_ch_T0000363;transcript_name=hg002_chrY_paternal_230.1;gene_name=TSPY1;ID=exon:HG03009_ch_T0000363:1;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9498619	9498746	.	+	.	source_transcript=hg002_chrY_paternal_230.5;source_transcript_name=hg002_chrY_paternal_230.1;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_230.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.5,hg002_chrY_paternal_230.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000363;gene_id=HG03009_ch_G0000135;Parent=HG03009_ch_T0000363;transcript_name=hg002_chrY_paternal_230.1;gene_name=TSPY1;ID=intron:HG03009_ch_T0000363:1;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9498747	9498858	.	+	.	source_transcript=hg002_chrY_paternal_230.5;source_transcript_name=hg002_chrY_paternal_230.1;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_230.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.5,hg002_chrY_paternal_230.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000363;gene_id=HG03009_ch_G0000135;Parent=HG03009_ch_T0000363;transcript_name=hg002_chrY_paternal_230.1;gene_name=TSPY1;ID=exon:HG03009_ch_T0000363:2;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9498859	9498966	.	+	.	source_transcript=hg002_chrY_paternal_230.5;source_transcript_name=hg002_chrY_paternal_230.1;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_230.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.5,hg002_chrY_paternal_230.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000363;gene_id=HG03009_ch_G0000135;Parent=HG03009_ch_T0000363;transcript_name=hg002_chrY_paternal_230.1;gene_name=TSPY1;ID=intron:HG03009_ch_T0000363:2;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9498967	9499105	.	+	.	source_transcript=hg002_chrY_paternal_230.5;source_transcript_name=hg002_chrY_paternal_230.1;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_230.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.5,hg002_chrY_paternal_230.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000363;gene_id=HG03009_ch_G0000135;Parent=HG03009_ch_T0000363;transcript_name=hg002_chrY_paternal_230.1;gene_name=TSPY1;ID=exon:HG03009_ch_T0000363:3;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9499106	9499200	.	+	.	source_transcript=hg002_chrY_paternal_230.5;source_transcript_name=hg002_chrY_paternal_230.1;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_230.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.5,hg002_chrY_paternal_230.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000363;gene_id=HG03009_ch_G0000135;Parent=HG03009_ch_T0000363;transcript_name=hg002_chrY_paternal_230.1;gene_name=TSPY1;ID=intron:HG03009_ch_T0000363:3;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9499201	9499293	.	+	.	source_transcript=hg002_chrY_paternal_230.5;source_transcript_name=hg002_chrY_paternal_230.1;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_230.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.5,hg002_chrY_paternal_230.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000363;gene_id=HG03009_ch_G0000135;Parent=HG03009_ch_T0000363;transcript_name=hg002_chrY_paternal_230.1;gene_name=TSPY1;ID=exon:HG03009_ch_T0000363:4;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9499294	9499987	.	+	.	source_transcript=hg002_chrY_paternal_230.5;source_transcript_name=hg002_chrY_paternal_230.1;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_230.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.5,hg002_chrY_paternal_230.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000363;gene_id=HG03009_ch_G0000135;Parent=HG03009_ch_T0000363;transcript_name=hg002_chrY_paternal_230.1;gene_name=TSPY1;ID=intron:HG03009_ch_T0000363:4;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9499988	9500198	.	+	.	source_transcript=hg002_chrY_paternal_230.5;source_transcript_name=hg002_chrY_paternal_230.1;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_230.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.5,hg002_chrY_paternal_230.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000363;gene_id=HG03009_ch_G0000135;Parent=HG03009_ch_T0000363;transcript_name=hg002_chrY_paternal_230.1;gene_name=TSPY1;ID=exon:HG03009_ch_T0000363:5;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	9509487	9515169	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_231;alternative_source_transcripts=hg002_chrY_paternal_231.1,hg002_chrY_paternal_231.1;gene_id=HG03009_ch_G0000136;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=HG03009_ch_G0000136;Name=FAM197Y2
HG03009_chrY	CAT	transcript	9509487	9515169	1000	-	.	source_transcript=hg002_chrY_paternal_231.1;source_transcript_name=hg002_chrY_paternal_231.1;source_gene=hg002_chrY_paternal_231;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_231;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_231.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_231.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_231.1,hg002_chrY_paternal_231.1;transcript_id=HG03009_ch_T0000364;gene_id=HG03009_ch_G0000136;Parent=HG03009_ch_G0000136;transcript_name=hg002_chrY_paternal_231.1;gene_name=FAM197Y2;ID=HG03009_ch_T0000364;Name=FAM197Y2
HG03009_chrY	CAT	exon	9509487	9509546	.	-	.	source_transcript=hg002_chrY_paternal_231.1;source_transcript_name=hg002_chrY_paternal_231.1;source_gene=hg002_chrY_paternal_231;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_231;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_231.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_231.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_231.1,hg002_chrY_paternal_231.1;transcript_id=HG03009_ch_T0000364;gene_id=HG03009_ch_G0000136;Parent=HG03009_ch_T0000364;transcript_name=hg002_chrY_paternal_231.1;gene_name=FAM197Y2;ID=exon:HG03009_ch_T0000364:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9509547	9513095	.	-	.	source_transcript=hg002_chrY_paternal_231.1;source_transcript_name=hg002_chrY_paternal_231.1;source_gene=hg002_chrY_paternal_231;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_231;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_231.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_231.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_231.1,hg002_chrY_paternal_231.1;transcript_id=HG03009_ch_T0000364;gene_id=HG03009_ch_G0000136;Parent=HG03009_ch_T0000364;transcript_name=hg002_chrY_paternal_231.1;gene_name=FAM197Y2;ID=intron:HG03009_ch_T0000364:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9513096	9513254	.	-	.	source_transcript=hg002_chrY_paternal_231.1;source_transcript_name=hg002_chrY_paternal_231.1;source_gene=hg002_chrY_paternal_231;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_231;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_231.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_231.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_231.1,hg002_chrY_paternal_231.1;transcript_id=HG03009_ch_T0000364;gene_id=HG03009_ch_G0000136;Parent=HG03009_ch_T0000364;transcript_name=hg002_chrY_paternal_231.1;gene_name=FAM197Y2;ID=exon:HG03009_ch_T0000364:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9513255	9514746	.	-	.	source_transcript=hg002_chrY_paternal_231.1;source_transcript_name=hg002_chrY_paternal_231.1;source_gene=hg002_chrY_paternal_231;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_231;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_231.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_231.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_231.1,hg002_chrY_paternal_231.1;transcript_id=HG03009_ch_T0000364;gene_id=HG03009_ch_G0000136;Parent=HG03009_ch_T0000364;transcript_name=hg002_chrY_paternal_231.1;gene_name=FAM197Y2;ID=intron:HG03009_ch_T0000364:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9514747	9514892	.	-	.	source_transcript=hg002_chrY_paternal_231.1;source_transcript_name=hg002_chrY_paternal_231.1;source_gene=hg002_chrY_paternal_231;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_231;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_231.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_231.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_231.1,hg002_chrY_paternal_231.1;transcript_id=HG03009_ch_T0000364;gene_id=HG03009_ch_G0000136;Parent=HG03009_ch_T0000364;transcript_name=hg002_chrY_paternal_231.1;gene_name=FAM197Y2;ID=exon:HG03009_ch_T0000364:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9514893	9514978	.	-	.	source_transcript=hg002_chrY_paternal_231.1;source_transcript_name=hg002_chrY_paternal_231.1;source_gene=hg002_chrY_paternal_231;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_231;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_231.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_231.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_231.1,hg002_chrY_paternal_231.1;transcript_id=HG03009_ch_T0000364;gene_id=HG03009_ch_G0000136;Parent=HG03009_ch_T0000364;transcript_name=hg002_chrY_paternal_231.1;gene_name=FAM197Y2;ID=intron:HG03009_ch_T0000364:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9514979	9515169	.	-	.	source_transcript=hg002_chrY_paternal_231.1;source_transcript_name=hg002_chrY_paternal_231.1;source_gene=hg002_chrY_paternal_231;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_231;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_231.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_231.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_231.1,hg002_chrY_paternal_231.1;transcript_id=HG03009_ch_T0000364;gene_id=HG03009_ch_G0000136;Parent=HG03009_ch_T0000364;transcript_name=hg002_chrY_paternal_231.1;gene_name=FAM197Y2;ID=exon:HG03009_ch_T0000364:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	9517693	9520489	.	+	.	source_gene_common_name=TSPY1;source_gene=hg002_chrY_paternal_232;alternative_source_transcripts=hg002_chrY_paternal_232.1,hg002_chrY_paternal_232.1;gene_id=HG03009_ch_G0000137;gene_biotype=protein_coding;gene_name=TSPY1;gene_sources=liftoff,augTM;ID=HG03009_ch_G0000137;Name=TSPY1
HG03009_chrY	CAT	transcript	9517693	9520489	100	+	.	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.1,hg002_chrY_paternal_232.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000365;gene_id=HG03009_ch_G0000137;Parent=HG03009_ch_G0000137;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=HG03009_ch_T0000365;Name=TSPY1
HG03009_chrY	CAT	exon	9517693	9518224	.	+	.	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.1,hg002_chrY_paternal_232.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000365;gene_id=HG03009_ch_G0000137;Parent=HG03009_ch_T0000365;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000365:0;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9517739	9518224	.	+	0	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.1,hg002_chrY_paternal_232.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000365;gene_id=HG03009_ch_G0000137;Parent=HG03009_ch_T0000365;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000365:0;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	9517739	9517741	.	+	0	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.1,hg002_chrY_paternal_232.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000365;gene_id=HG03009_ch_G0000137;Parent=HG03009_ch_T0000365;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=start_codon:HG03009_ch_T0000365;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9518225	9518831	.	+	.	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.1,hg002_chrY_paternal_232.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000365;gene_id=HG03009_ch_G0000137;Parent=HG03009_ch_T0000365;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000365:0;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9518832	9518909	.	+	.	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.1,hg002_chrY_paternal_232.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000365;gene_id=HG03009_ch_G0000137;Parent=HG03009_ch_T0000365;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000365:1;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9518832	9518909	.	+	0	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.1,hg002_chrY_paternal_232.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000365;gene_id=HG03009_ch_G0000137;Parent=HG03009_ch_T0000365;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000365:1;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9518910	9519037	.	+	.	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.1,hg002_chrY_paternal_232.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000365;gene_id=HG03009_ch_G0000137;Parent=HG03009_ch_T0000365;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000365:1;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9519038	9519149	.	+	.	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.1,hg002_chrY_paternal_232.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000365;gene_id=HG03009_ch_G0000137;Parent=HG03009_ch_T0000365;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000365:2;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9519038	9519149	.	+	0	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.1,hg002_chrY_paternal_232.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000365;gene_id=HG03009_ch_G0000137;Parent=HG03009_ch_T0000365;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000365:2;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9519150	9519250	.	+	.	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.1,hg002_chrY_paternal_232.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000365;gene_id=HG03009_ch_G0000137;Parent=HG03009_ch_T0000365;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000365:2;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9519251	9519396	.	+	.	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.1,hg002_chrY_paternal_232.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000365;gene_id=HG03009_ch_G0000137;Parent=HG03009_ch_T0000365;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000365:3;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9519251	9519396	.	+	2	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.1,hg002_chrY_paternal_232.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000365;gene_id=HG03009_ch_G0000137;Parent=HG03009_ch_T0000365;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000365:3;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9519397	9519491	.	+	.	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.1,hg002_chrY_paternal_232.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000365;gene_id=HG03009_ch_G0000137;Parent=HG03009_ch_T0000365;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000365:3;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9519492	9519584	.	+	.	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.1,hg002_chrY_paternal_232.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000365;gene_id=HG03009_ch_G0000137;Parent=HG03009_ch_T0000365;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000365:4;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9519492	9519554	.	+	0	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.1,hg002_chrY_paternal_232.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000365;gene_id=HG03009_ch_G0000137;Parent=HG03009_ch_T0000365;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000365:4;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	9519552	9519554	.	+	0	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.1,hg002_chrY_paternal_232.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000365;gene_id=HG03009_ch_G0000137;Parent=HG03009_ch_T0000365;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=stop_codon:HG03009_ch_T0000365;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9519585	9520278	.	+	.	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.1,hg002_chrY_paternal_232.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000365;gene_id=HG03009_ch_G0000137;Parent=HG03009_ch_T0000365;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000365:4;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9520279	9520489	.	+	.	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.1,hg002_chrY_paternal_232.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000365;gene_id=HG03009_ch_G0000137;Parent=HG03009_ch_T0000365;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000365:5;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	9517693	9520489	100	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2,hg002_chrY_paternal_232.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000366;gene_id=HG03009_ch_G0000137;Parent=HG03009_ch_G0000137;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=HG03009_ch_T0000366;Name=TSPY1
HG03009_chrY	CAT	exon	9517693	9517825	.	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2,hg002_chrY_paternal_232.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000366;gene_id=HG03009_ch_G0000137;Parent=HG03009_ch_T0000366;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000366:0;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9517739	9517825	.	+	0	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2,hg002_chrY_paternal_232.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000366;gene_id=HG03009_ch_G0000137;Parent=HG03009_ch_T0000366;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000366:0;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	9517739	9517741	.	+	0	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2,hg002_chrY_paternal_232.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000366;gene_id=HG03009_ch_G0000137;Parent=HG03009_ch_T0000366;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=start_codon:HG03009_ch_T0000366;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9517826	9518086	.	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2,hg002_chrY_paternal_232.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000366;gene_id=HG03009_ch_G0000137;Parent=HG03009_ch_T0000366;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000366:0;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9518087	9518224	.	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2,hg002_chrY_paternal_232.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000366;gene_id=HG03009_ch_G0000137;Parent=HG03009_ch_T0000366;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000366:1;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9518087	9518224	.	+	0	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2,hg002_chrY_paternal_232.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000366;gene_id=HG03009_ch_G0000137;Parent=HG03009_ch_T0000366;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000366:1;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9518225	9518831	.	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2,hg002_chrY_paternal_232.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000366;gene_id=HG03009_ch_G0000137;Parent=HG03009_ch_T0000366;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000366:1;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9518832	9518909	.	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2,hg002_chrY_paternal_232.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000366;gene_id=HG03009_ch_G0000137;Parent=HG03009_ch_T0000366;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000366:2;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9518832	9518909	.	+	0	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2,hg002_chrY_paternal_232.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000366;gene_id=HG03009_ch_G0000137;Parent=HG03009_ch_T0000366;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000366:2;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9518910	9519037	.	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2,hg002_chrY_paternal_232.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000366;gene_id=HG03009_ch_G0000137;Parent=HG03009_ch_T0000366;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000366:2;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9519038	9519149	.	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2,hg002_chrY_paternal_232.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000366;gene_id=HG03009_ch_G0000137;Parent=HG03009_ch_T0000366;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000366:3;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9519038	9519149	.	+	0	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2,hg002_chrY_paternal_232.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000366;gene_id=HG03009_ch_G0000137;Parent=HG03009_ch_T0000366;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000366:3;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9519150	9519250	.	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2,hg002_chrY_paternal_232.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000366;gene_id=HG03009_ch_G0000137;Parent=HG03009_ch_T0000366;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000366:3;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9519251	9519396	.	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2,hg002_chrY_paternal_232.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000366;gene_id=HG03009_ch_G0000137;Parent=HG03009_ch_T0000366;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000366:4;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9519251	9519396	.	+	2	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2,hg002_chrY_paternal_232.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000366;gene_id=HG03009_ch_G0000137;Parent=HG03009_ch_T0000366;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000366:4;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9519397	9519502	.	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2,hg002_chrY_paternal_232.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000366;gene_id=HG03009_ch_G0000137;Parent=HG03009_ch_T0000366;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000366:4;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9519503	9519584	.	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2,hg002_chrY_paternal_232.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000366;gene_id=HG03009_ch_G0000137;Parent=HG03009_ch_T0000366;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000366:5;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9519503	9519584	.	+	0	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2,hg002_chrY_paternal_232.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000366;gene_id=HG03009_ch_G0000137;Parent=HG03009_ch_T0000366;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000366:5;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9519585	9520278	.	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2,hg002_chrY_paternal_232.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000366;gene_id=HG03009_ch_G0000137;Parent=HG03009_ch_T0000366;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000366:5;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9520279	9520489	.	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2,hg002_chrY_paternal_232.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000366;gene_id=HG03009_ch_G0000137;Parent=HG03009_ch_T0000366;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000366:6;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9520279	9520301	.	+	2	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2,hg002_chrY_paternal_232.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000366;gene_id=HG03009_ch_G0000137;Parent=HG03009_ch_T0000366;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000366:6;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	9520299	9520301	.	+	0	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2,hg002_chrY_paternal_232.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000366;gene_id=HG03009_ch_G0000137;Parent=HG03009_ch_T0000366;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=stop_codon:HG03009_ch_T0000366;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	9517693	9520489	100	+	.	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.3,hg002_chrY_paternal_232.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000367;gene_id=HG03009_ch_G0000137;Parent=HG03009_ch_G0000137;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=HG03009_ch_T0000367;Name=TSPY1
HG03009_chrY	CAT	exon	9517693	9518224	.	+	.	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.3,hg002_chrY_paternal_232.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000367;gene_id=HG03009_ch_G0000137;Parent=HG03009_ch_T0000367;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000367:0;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9517739	9518224	.	+	0	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.3,hg002_chrY_paternal_232.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000367;gene_id=HG03009_ch_G0000137;Parent=HG03009_ch_T0000367;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000367:0;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	9517739	9517741	.	+	0	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.3,hg002_chrY_paternal_232.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000367;gene_id=HG03009_ch_G0000137;Parent=HG03009_ch_T0000367;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=start_codon:HG03009_ch_T0000367;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9518225	9518831	.	+	.	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.3,hg002_chrY_paternal_232.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000367;gene_id=HG03009_ch_G0000137;Parent=HG03009_ch_T0000367;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000367:0;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9518832	9518909	.	+	.	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.3,hg002_chrY_paternal_232.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000367;gene_id=HG03009_ch_G0000137;Parent=HG03009_ch_T0000367;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000367:1;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9518832	9518909	.	+	0	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.3,hg002_chrY_paternal_232.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000367;gene_id=HG03009_ch_G0000137;Parent=HG03009_ch_T0000367;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000367:1;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9518910	9519037	.	+	.	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.3,hg002_chrY_paternal_232.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000367;gene_id=HG03009_ch_G0000137;Parent=HG03009_ch_T0000367;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000367:1;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9519038	9519149	.	+	.	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.3,hg002_chrY_paternal_232.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000367;gene_id=HG03009_ch_G0000137;Parent=HG03009_ch_T0000367;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000367:2;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9519038	9519149	.	+	0	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.3,hg002_chrY_paternal_232.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000367;gene_id=HG03009_ch_G0000137;Parent=HG03009_ch_T0000367;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000367:2;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9519150	9519250	.	+	.	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.3,hg002_chrY_paternal_232.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000367;gene_id=HG03009_ch_G0000137;Parent=HG03009_ch_T0000367;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000367:2;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9519251	9519396	.	+	.	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.3,hg002_chrY_paternal_232.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000367;gene_id=HG03009_ch_G0000137;Parent=HG03009_ch_T0000367;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000367:3;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9519251	9519396	.	+	2	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.3,hg002_chrY_paternal_232.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000367;gene_id=HG03009_ch_G0000137;Parent=HG03009_ch_T0000367;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000367:3;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9519397	9519502	.	+	.	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.3,hg002_chrY_paternal_232.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000367;gene_id=HG03009_ch_G0000137;Parent=HG03009_ch_T0000367;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000367:3;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9519503	9519584	.	+	.	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.3,hg002_chrY_paternal_232.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000367;gene_id=HG03009_ch_G0000137;Parent=HG03009_ch_T0000367;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000367:4;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9519503	9519584	.	+	0	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.3,hg002_chrY_paternal_232.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000367;gene_id=HG03009_ch_G0000137;Parent=HG03009_ch_T0000367;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000367:4;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9519585	9520278	.	+	.	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.3,hg002_chrY_paternal_232.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000367;gene_id=HG03009_ch_G0000137;Parent=HG03009_ch_T0000367;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000367:4;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9520279	9520489	.	+	.	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.3,hg002_chrY_paternal_232.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000367;gene_id=HG03009_ch_G0000137;Parent=HG03009_ch_T0000367;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000367:5;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9520279	9520301	.	+	2	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.3,hg002_chrY_paternal_232.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000367;gene_id=HG03009_ch_G0000137;Parent=HG03009_ch_T0000367;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000367:5;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	9520299	9520301	.	+	0	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.3,hg002_chrY_paternal_232.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000367;gene_id=HG03009_ch_G0000137;Parent=HG03009_ch_T0000367;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=stop_codon:HG03009_ch_T0000367;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	9517693	9520489	100	+	.	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.4,hg002_chrY_paternal_232.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000368;gene_id=HG03009_ch_G0000137;Parent=HG03009_ch_G0000137;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=HG03009_ch_T0000368;Name=TSPY1
HG03009_chrY	CAT	exon	9517693	9518224	.	+	.	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.4,hg002_chrY_paternal_232.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000368;gene_id=HG03009_ch_G0000137;Parent=HG03009_ch_T0000368;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000368:0;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9517739	9518224	.	+	0	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.4,hg002_chrY_paternal_232.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000368;gene_id=HG03009_ch_G0000137;Parent=HG03009_ch_T0000368;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000368:0;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	9517739	9517741	.	+	0	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.4,hg002_chrY_paternal_232.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000368;gene_id=HG03009_ch_G0000137;Parent=HG03009_ch_T0000368;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=start_codon:HG03009_ch_T0000368;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9518225	9518831	.	+	.	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.4,hg002_chrY_paternal_232.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000368;gene_id=HG03009_ch_G0000137;Parent=HG03009_ch_T0000368;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000368:0;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9518832	9518909	.	+	.	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.4,hg002_chrY_paternal_232.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000368;gene_id=HG03009_ch_G0000137;Parent=HG03009_ch_T0000368;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000368:1;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9518832	9518909	.	+	0	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.4,hg002_chrY_paternal_232.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000368;gene_id=HG03009_ch_G0000137;Parent=HG03009_ch_T0000368;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000368:1;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9518910	9519037	.	+	.	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.4,hg002_chrY_paternal_232.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000368;gene_id=HG03009_ch_G0000137;Parent=HG03009_ch_T0000368;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000368:1;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9519038	9519149	.	+	.	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.4,hg002_chrY_paternal_232.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000368;gene_id=HG03009_ch_G0000137;Parent=HG03009_ch_T0000368;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000368:2;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9519038	9519149	.	+	0	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.4,hg002_chrY_paternal_232.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000368;gene_id=HG03009_ch_G0000137;Parent=HG03009_ch_T0000368;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000368:2;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9519150	9519257	.	+	.	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.4,hg002_chrY_paternal_232.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000368;gene_id=HG03009_ch_G0000137;Parent=HG03009_ch_T0000368;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000368:2;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9519258	9519396	.	+	.	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.4,hg002_chrY_paternal_232.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000368;gene_id=HG03009_ch_G0000137;Parent=HG03009_ch_T0000368;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000368:3;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9519258	9519396	.	+	2	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.4,hg002_chrY_paternal_232.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000368;gene_id=HG03009_ch_G0000137;Parent=HG03009_ch_T0000368;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000368:3;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9519397	9519502	.	+	.	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.4,hg002_chrY_paternal_232.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000368;gene_id=HG03009_ch_G0000137;Parent=HG03009_ch_T0000368;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000368:3;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9519503	9519584	.	+	.	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.4,hg002_chrY_paternal_232.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000368;gene_id=HG03009_ch_G0000137;Parent=HG03009_ch_T0000368;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000368:4;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9519503	9519554	.	+	1	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.4,hg002_chrY_paternal_232.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000368;gene_id=HG03009_ch_G0000137;Parent=HG03009_ch_T0000368;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG03009_ch_T0000368:4;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	9519552	9519554	.	+	0	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.4,hg002_chrY_paternal_232.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000368;gene_id=HG03009_ch_G0000137;Parent=HG03009_ch_T0000368;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=stop_codon:HG03009_ch_T0000368;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9519585	9520278	.	+	.	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.4,hg002_chrY_paternal_232.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000368;gene_id=HG03009_ch_G0000137;Parent=HG03009_ch_T0000368;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG03009_ch_T0000368:4;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9520279	9520489	.	+	.	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.4,hg002_chrY_paternal_232.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000368;gene_id=HG03009_ch_G0000137;Parent=HG03009_ch_T0000368;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG03009_ch_T0000368:5;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	9517693	9520489	1000	+	.	source_transcript=hg002_chrY_paternal_232.5;source_transcript_name=hg002_chrY_paternal_232.1;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.5,hg002_chrY_paternal_232.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000369;gene_id=HG03009_ch_G0000137;Parent=HG03009_ch_G0000137;transcript_name=hg002_chrY_paternal_232.1;gene_name=TSPY1;ID=HG03009_ch_T0000369;Name=TSPY1
HG03009_chrY	CAT	exon	9517693	9518224	.	+	.	source_transcript=hg002_chrY_paternal_232.5;source_transcript_name=hg002_chrY_paternal_232.1;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.5,hg002_chrY_paternal_232.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000369;gene_id=HG03009_ch_G0000137;Parent=HG03009_ch_T0000369;transcript_name=hg002_chrY_paternal_232.1;gene_name=TSPY1;ID=exon:HG03009_ch_T0000369:0;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9518225	9518831	.	+	.	source_transcript=hg002_chrY_paternal_232.5;source_transcript_name=hg002_chrY_paternal_232.1;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.5,hg002_chrY_paternal_232.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000369;gene_id=HG03009_ch_G0000137;Parent=HG03009_ch_T0000369;transcript_name=hg002_chrY_paternal_232.1;gene_name=TSPY1;ID=intron:HG03009_ch_T0000369:0;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9518832	9518909	.	+	.	source_transcript=hg002_chrY_paternal_232.5;source_transcript_name=hg002_chrY_paternal_232.1;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.5,hg002_chrY_paternal_232.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000369;gene_id=HG03009_ch_G0000137;Parent=HG03009_ch_T0000369;transcript_name=hg002_chrY_paternal_232.1;gene_name=TSPY1;ID=exon:HG03009_ch_T0000369:1;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9518910	9519037	.	+	.	source_transcript=hg002_chrY_paternal_232.5;source_transcript_name=hg002_chrY_paternal_232.1;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.5,hg002_chrY_paternal_232.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000369;gene_id=HG03009_ch_G0000137;Parent=HG03009_ch_T0000369;transcript_name=hg002_chrY_paternal_232.1;gene_name=TSPY1;ID=intron:HG03009_ch_T0000369:1;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9519038	9519149	.	+	.	source_transcript=hg002_chrY_paternal_232.5;source_transcript_name=hg002_chrY_paternal_232.1;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.5,hg002_chrY_paternal_232.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000369;gene_id=HG03009_ch_G0000137;Parent=HG03009_ch_T0000369;transcript_name=hg002_chrY_paternal_232.1;gene_name=TSPY1;ID=exon:HG03009_ch_T0000369:2;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9519150	9519257	.	+	.	source_transcript=hg002_chrY_paternal_232.5;source_transcript_name=hg002_chrY_paternal_232.1;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.5,hg002_chrY_paternal_232.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000369;gene_id=HG03009_ch_G0000137;Parent=HG03009_ch_T0000369;transcript_name=hg002_chrY_paternal_232.1;gene_name=TSPY1;ID=intron:HG03009_ch_T0000369:2;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9519258	9519396	.	+	.	source_transcript=hg002_chrY_paternal_232.5;source_transcript_name=hg002_chrY_paternal_232.1;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.5,hg002_chrY_paternal_232.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000369;gene_id=HG03009_ch_G0000137;Parent=HG03009_ch_T0000369;transcript_name=hg002_chrY_paternal_232.1;gene_name=TSPY1;ID=exon:HG03009_ch_T0000369:3;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9519397	9519491	.	+	.	source_transcript=hg002_chrY_paternal_232.5;source_transcript_name=hg002_chrY_paternal_232.1;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.5,hg002_chrY_paternal_232.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000369;gene_id=HG03009_ch_G0000137;Parent=HG03009_ch_T0000369;transcript_name=hg002_chrY_paternal_232.1;gene_name=TSPY1;ID=intron:HG03009_ch_T0000369:3;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9519492	9519584	.	+	.	source_transcript=hg002_chrY_paternal_232.5;source_transcript_name=hg002_chrY_paternal_232.1;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.5,hg002_chrY_paternal_232.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000369;gene_id=HG03009_ch_G0000137;Parent=HG03009_ch_T0000369;transcript_name=hg002_chrY_paternal_232.1;gene_name=TSPY1;ID=exon:HG03009_ch_T0000369:4;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9519585	9520278	.	+	.	source_transcript=hg002_chrY_paternal_232.5;source_transcript_name=hg002_chrY_paternal_232.1;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.5,hg002_chrY_paternal_232.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000369;gene_id=HG03009_ch_G0000137;Parent=HG03009_ch_T0000369;transcript_name=hg002_chrY_paternal_232.1;gene_name=TSPY1;ID=intron:HG03009_ch_T0000369:4;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9520279	9520489	.	+	.	source_transcript=hg002_chrY_paternal_232.5;source_transcript_name=hg002_chrY_paternal_232.1;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.5,hg002_chrY_paternal_232.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000369;gene_id=HG03009_ch_G0000137;Parent=HG03009_ch_T0000369;transcript_name=hg002_chrY_paternal_232.1;gene_name=TSPY1;ID=exon:HG03009_ch_T0000369:5;Name=TSPY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	9529760	9535451	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_233;alternative_source_transcripts=hg002_chrY_paternal_233.1,hg002_chrY_paternal_233.1;gene_id=HG03009_ch_G0000138;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=HG03009_ch_G0000138;Name=FAM197Y2
HG03009_chrY	CAT	transcript	9529760	9535451	1000	-	.	source_transcript=hg002_chrY_paternal_233.1;source_transcript_name=hg002_chrY_paternal_233.1;source_gene=hg002_chrY_paternal_233;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_233;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_233.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_233.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_233.1,hg002_chrY_paternal_233.1;transcript_id=HG03009_ch_T0000370;gene_id=HG03009_ch_G0000138;Parent=HG03009_ch_G0000138;transcript_name=hg002_chrY_paternal_233.1;gene_name=FAM197Y2;ID=HG03009_ch_T0000370;Name=FAM197Y2
HG03009_chrY	CAT	exon	9529760	9529819	.	-	.	source_transcript=hg002_chrY_paternal_233.1;source_transcript_name=hg002_chrY_paternal_233.1;source_gene=hg002_chrY_paternal_233;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_233;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_233.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_233.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_233.1,hg002_chrY_paternal_233.1;transcript_id=HG03009_ch_T0000370;gene_id=HG03009_ch_G0000138;Parent=HG03009_ch_T0000370;transcript_name=hg002_chrY_paternal_233.1;gene_name=FAM197Y2;ID=exon:HG03009_ch_T0000370:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9529820	9533369	.	-	.	source_transcript=hg002_chrY_paternal_233.1;source_transcript_name=hg002_chrY_paternal_233.1;source_gene=hg002_chrY_paternal_233;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_233;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_233.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_233.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_233.1,hg002_chrY_paternal_233.1;transcript_id=HG03009_ch_T0000370;gene_id=HG03009_ch_G0000138;Parent=HG03009_ch_T0000370;transcript_name=hg002_chrY_paternal_233.1;gene_name=FAM197Y2;ID=intron:HG03009_ch_T0000370:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9533370	9533528	.	-	.	source_transcript=hg002_chrY_paternal_233.1;source_transcript_name=hg002_chrY_paternal_233.1;source_gene=hg002_chrY_paternal_233;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_233;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_233.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_233.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_233.1,hg002_chrY_paternal_233.1;transcript_id=HG03009_ch_T0000370;gene_id=HG03009_ch_G0000138;Parent=HG03009_ch_T0000370;transcript_name=hg002_chrY_paternal_233.1;gene_name=FAM197Y2;ID=exon:HG03009_ch_T0000370:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9533529	9535028	.	-	.	source_transcript=hg002_chrY_paternal_233.1;source_transcript_name=hg002_chrY_paternal_233.1;source_gene=hg002_chrY_paternal_233;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_233;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_233.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_233.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_233.1,hg002_chrY_paternal_233.1;transcript_id=HG03009_ch_T0000370;gene_id=HG03009_ch_G0000138;Parent=HG03009_ch_T0000370;transcript_name=hg002_chrY_paternal_233.1;gene_name=FAM197Y2;ID=intron:HG03009_ch_T0000370:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9535029	9535174	.	-	.	source_transcript=hg002_chrY_paternal_233.1;source_transcript_name=hg002_chrY_paternal_233.1;source_gene=hg002_chrY_paternal_233;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_233;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_233.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_233.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_233.1,hg002_chrY_paternal_233.1;transcript_id=HG03009_ch_T0000370;gene_id=HG03009_ch_G0000138;Parent=HG03009_ch_T0000370;transcript_name=hg002_chrY_paternal_233.1;gene_name=FAM197Y2;ID=exon:HG03009_ch_T0000370:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9535175	9535260	.	-	.	source_transcript=hg002_chrY_paternal_233.1;source_transcript_name=hg002_chrY_paternal_233.1;source_gene=hg002_chrY_paternal_233;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_233;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_233.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_233.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_233.1,hg002_chrY_paternal_233.1;transcript_id=HG03009_ch_T0000370;gene_id=HG03009_ch_G0000138;Parent=HG03009_ch_T0000370;transcript_name=hg002_chrY_paternal_233.1;gene_name=FAM197Y2;ID=intron:HG03009_ch_T0000370:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9535261	9535451	.	-	.	source_transcript=hg002_chrY_paternal_233.1;source_transcript_name=hg002_chrY_paternal_233.1;source_gene=hg002_chrY_paternal_233;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_233;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_233.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_233.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_233.1,hg002_chrY_paternal_233.1;transcript_id=HG03009_ch_T0000370;gene_id=HG03009_ch_G0000138;Parent=HG03009_ch_T0000370;transcript_name=hg002_chrY_paternal_233.1;gene_name=FAM197Y2;ID=exon:HG03009_ch_T0000370:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	9537975	9540772	.	+	.	source_gene_common_name=TSPY10;source_gene=hg002_chrY_paternal_218;alternative_source_transcripts=hg002_chrY_paternal_234.1,hg002_chrY_paternal_234.1;gene_id=HG03009_ch_G0000139;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff;ID=HG03009_ch_G0000139;Name=TSPY10
HG03009_chrY	CAT	transcript	9537975	9540772	10000	+	.	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.1,hg002_chrY_paternal_234.1;transcript_id=HG03009_ch_T0000371;gene_id=HG03009_ch_G0000139;Parent=HG03009_ch_G0000139;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=HG03009_ch_T0000371;Name=TSPY10
HG03009_chrY	CAT	exon	9537975	9538506	.	+	.	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.1,hg002_chrY_paternal_234.1;transcript_id=HG03009_ch_T0000371;gene_id=HG03009_ch_G0000139;Parent=HG03009_ch_T0000371;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000371:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9538021	9538506	.	+	0	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.1,hg002_chrY_paternal_234.1;transcript_id=HG03009_ch_T0000371;gene_id=HG03009_ch_G0000139;Parent=HG03009_ch_T0000371;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000371:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	9538021	9538023	.	+	0	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.1,hg002_chrY_paternal_234.1;transcript_id=HG03009_ch_T0000371;gene_id=HG03009_ch_G0000139;Parent=HG03009_ch_T0000371;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=start_codon:HG03009_ch_T0000371;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9538507	9539113	.	+	.	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.1,hg002_chrY_paternal_234.1;transcript_id=HG03009_ch_T0000371;gene_id=HG03009_ch_G0000139;Parent=HG03009_ch_T0000371;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000371:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9539114	9539191	.	+	.	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.1,hg002_chrY_paternal_234.1;transcript_id=HG03009_ch_T0000371;gene_id=HG03009_ch_G0000139;Parent=HG03009_ch_T0000371;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000371:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9539114	9539191	.	+	0	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.1,hg002_chrY_paternal_234.1;transcript_id=HG03009_ch_T0000371;gene_id=HG03009_ch_G0000139;Parent=HG03009_ch_T0000371;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000371:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9539192	9539319	.	+	.	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.1,hg002_chrY_paternal_234.1;transcript_id=HG03009_ch_T0000371;gene_id=HG03009_ch_G0000139;Parent=HG03009_ch_T0000371;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000371:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9539320	9539431	.	+	.	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.1,hg002_chrY_paternal_234.1;transcript_id=HG03009_ch_T0000371;gene_id=HG03009_ch_G0000139;Parent=HG03009_ch_T0000371;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000371:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9539320	9539431	.	+	0	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.1,hg002_chrY_paternal_234.1;transcript_id=HG03009_ch_T0000371;gene_id=HG03009_ch_G0000139;Parent=HG03009_ch_T0000371;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000371:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9539432	9539532	.	+	.	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.1,hg002_chrY_paternal_234.1;transcript_id=HG03009_ch_T0000371;gene_id=HG03009_ch_G0000139;Parent=HG03009_ch_T0000371;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000371:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9539533	9539678	.	+	.	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.1,hg002_chrY_paternal_234.1;transcript_id=HG03009_ch_T0000371;gene_id=HG03009_ch_G0000139;Parent=HG03009_ch_T0000371;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000371:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9539533	9539678	.	+	2	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.1,hg002_chrY_paternal_234.1;transcript_id=HG03009_ch_T0000371;gene_id=HG03009_ch_G0000139;Parent=HG03009_ch_T0000371;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000371:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9539679	9539784	.	+	.	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.1,hg002_chrY_paternal_234.1;transcript_id=HG03009_ch_T0000371;gene_id=HG03009_ch_G0000139;Parent=HG03009_ch_T0000371;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000371:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9539785	9539866	.	+	.	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.1,hg002_chrY_paternal_234.1;transcript_id=HG03009_ch_T0000371;gene_id=HG03009_ch_G0000139;Parent=HG03009_ch_T0000371;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000371:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9539785	9539866	.	+	0	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.1,hg002_chrY_paternal_234.1;transcript_id=HG03009_ch_T0000371;gene_id=HG03009_ch_G0000139;Parent=HG03009_ch_T0000371;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000371:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9539867	9540560	.	+	.	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.1,hg002_chrY_paternal_234.1;transcript_id=HG03009_ch_T0000371;gene_id=HG03009_ch_G0000139;Parent=HG03009_ch_T0000371;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000371:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9540561	9540772	.	+	.	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.1,hg002_chrY_paternal_234.1;transcript_id=HG03009_ch_T0000371;gene_id=HG03009_ch_G0000139;Parent=HG03009_ch_T0000371;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000371:5;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9540561	9540583	.	+	2	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.1,hg002_chrY_paternal_234.1;transcript_id=HG03009_ch_T0000371;gene_id=HG03009_ch_G0000139;Parent=HG03009_ch_T0000371;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000371:5;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	9540581	9540583	.	+	0	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.1,hg002_chrY_paternal_234.1;transcript_id=HG03009_ch_T0000371;gene_id=HG03009_ch_G0000139;Parent=HG03009_ch_T0000371;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=stop_codon:HG03009_ch_T0000371;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	9537975	9540772	10000	+	.	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.2,hg002_chrY_paternal_234.2;transcript_id=HG03009_ch_T0000372;gene_id=HG03009_ch_G0000139;Parent=HG03009_ch_G0000139;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=HG03009_ch_T0000372;Name=TSPY10
HG03009_chrY	CAT	exon	9537975	9538506	.	+	.	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.2,hg002_chrY_paternal_234.2;transcript_id=HG03009_ch_T0000372;gene_id=HG03009_ch_G0000139;Parent=HG03009_ch_T0000372;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000372:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9538021	9538506	.	+	0	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.2,hg002_chrY_paternal_234.2;transcript_id=HG03009_ch_T0000372;gene_id=HG03009_ch_G0000139;Parent=HG03009_ch_T0000372;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000372:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	9538021	9538023	.	+	0	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.2,hg002_chrY_paternal_234.2;transcript_id=HG03009_ch_T0000372;gene_id=HG03009_ch_G0000139;Parent=HG03009_ch_T0000372;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=start_codon:HG03009_ch_T0000372;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9538507	9539113	.	+	.	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.2,hg002_chrY_paternal_234.2;transcript_id=HG03009_ch_T0000372;gene_id=HG03009_ch_G0000139;Parent=HG03009_ch_T0000372;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000372:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9539114	9539191	.	+	.	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.2,hg002_chrY_paternal_234.2;transcript_id=HG03009_ch_T0000372;gene_id=HG03009_ch_G0000139;Parent=HG03009_ch_T0000372;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000372:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9539114	9539191	.	+	0	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.2,hg002_chrY_paternal_234.2;transcript_id=HG03009_ch_T0000372;gene_id=HG03009_ch_G0000139;Parent=HG03009_ch_T0000372;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000372:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9539192	9539319	.	+	.	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.2,hg002_chrY_paternal_234.2;transcript_id=HG03009_ch_T0000372;gene_id=HG03009_ch_G0000139;Parent=HG03009_ch_T0000372;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000372:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9539320	9539431	.	+	.	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.2,hg002_chrY_paternal_234.2;transcript_id=HG03009_ch_T0000372;gene_id=HG03009_ch_G0000139;Parent=HG03009_ch_T0000372;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000372:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9539320	9539431	.	+	0	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.2,hg002_chrY_paternal_234.2;transcript_id=HG03009_ch_T0000372;gene_id=HG03009_ch_G0000139;Parent=HG03009_ch_T0000372;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000372:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9539432	9539532	.	+	.	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.2,hg002_chrY_paternal_234.2;transcript_id=HG03009_ch_T0000372;gene_id=HG03009_ch_G0000139;Parent=HG03009_ch_T0000372;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000372:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9539533	9539678	.	+	.	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.2,hg002_chrY_paternal_234.2;transcript_id=HG03009_ch_T0000372;gene_id=HG03009_ch_G0000139;Parent=HG03009_ch_T0000372;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000372:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9539533	9539678	.	+	2	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.2,hg002_chrY_paternal_234.2;transcript_id=HG03009_ch_T0000372;gene_id=HG03009_ch_G0000139;Parent=HG03009_ch_T0000372;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000372:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9539679	9539773	.	+	.	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.2,hg002_chrY_paternal_234.2;transcript_id=HG03009_ch_T0000372;gene_id=HG03009_ch_G0000139;Parent=HG03009_ch_T0000372;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000372:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9539774	9539866	.	+	.	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.2,hg002_chrY_paternal_234.2;transcript_id=HG03009_ch_T0000372;gene_id=HG03009_ch_G0000139;Parent=HG03009_ch_T0000372;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000372:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9539774	9539836	.	+	0	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.2,hg002_chrY_paternal_234.2;transcript_id=HG03009_ch_T0000372;gene_id=HG03009_ch_G0000139;Parent=HG03009_ch_T0000372;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000372:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	9539834	9539836	.	+	0	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.2,hg002_chrY_paternal_234.2;transcript_id=HG03009_ch_T0000372;gene_id=HG03009_ch_G0000139;Parent=HG03009_ch_T0000372;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=stop_codon:HG03009_ch_T0000372;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9539867	9540560	.	+	.	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.2,hg002_chrY_paternal_234.2;transcript_id=HG03009_ch_T0000372;gene_id=HG03009_ch_G0000139;Parent=HG03009_ch_T0000372;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000372:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9540561	9540772	.	+	.	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.2,hg002_chrY_paternal_234.2;transcript_id=HG03009_ch_T0000372;gene_id=HG03009_ch_G0000139;Parent=HG03009_ch_T0000372;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000372:5;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	9537975	9540772	10000	+	.	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.3,hg002_chrY_paternal_234.3;transcript_id=HG03009_ch_T0000373;gene_id=HG03009_ch_G0000139;Parent=HG03009_ch_G0000139;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=HG03009_ch_T0000373;Name=TSPY10
HG03009_chrY	CAT	exon	9537975	9538506	.	+	.	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.3,hg002_chrY_paternal_234.3;transcript_id=HG03009_ch_T0000373;gene_id=HG03009_ch_G0000139;Parent=HG03009_ch_T0000373;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000373:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9538021	9538506	.	+	0	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.3,hg002_chrY_paternal_234.3;transcript_id=HG03009_ch_T0000373;gene_id=HG03009_ch_G0000139;Parent=HG03009_ch_T0000373;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000373:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	9538021	9538023	.	+	0	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.3,hg002_chrY_paternal_234.3;transcript_id=HG03009_ch_T0000373;gene_id=HG03009_ch_G0000139;Parent=HG03009_ch_T0000373;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=start_codon:HG03009_ch_T0000373;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9538507	9539113	.	+	.	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.3,hg002_chrY_paternal_234.3;transcript_id=HG03009_ch_T0000373;gene_id=HG03009_ch_G0000139;Parent=HG03009_ch_T0000373;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000373:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9539114	9539191	.	+	.	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.3,hg002_chrY_paternal_234.3;transcript_id=HG03009_ch_T0000373;gene_id=HG03009_ch_G0000139;Parent=HG03009_ch_T0000373;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000373:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9539114	9539191	.	+	0	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.3,hg002_chrY_paternal_234.3;transcript_id=HG03009_ch_T0000373;gene_id=HG03009_ch_G0000139;Parent=HG03009_ch_T0000373;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000373:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9539192	9539319	.	+	.	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.3,hg002_chrY_paternal_234.3;transcript_id=HG03009_ch_T0000373;gene_id=HG03009_ch_G0000139;Parent=HG03009_ch_T0000373;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000373:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9539320	9539431	.	+	.	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.3,hg002_chrY_paternal_234.3;transcript_id=HG03009_ch_T0000373;gene_id=HG03009_ch_G0000139;Parent=HG03009_ch_T0000373;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000373:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9539320	9539431	.	+	0	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.3,hg002_chrY_paternal_234.3;transcript_id=HG03009_ch_T0000373;gene_id=HG03009_ch_G0000139;Parent=HG03009_ch_T0000373;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000373:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9539432	9539539	.	+	.	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.3,hg002_chrY_paternal_234.3;transcript_id=HG03009_ch_T0000373;gene_id=HG03009_ch_G0000139;Parent=HG03009_ch_T0000373;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000373:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9539540	9539678	.	+	.	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.3,hg002_chrY_paternal_234.3;transcript_id=HG03009_ch_T0000373;gene_id=HG03009_ch_G0000139;Parent=HG03009_ch_T0000373;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000373:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9539540	9539678	.	+	2	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.3,hg002_chrY_paternal_234.3;transcript_id=HG03009_ch_T0000373;gene_id=HG03009_ch_G0000139;Parent=HG03009_ch_T0000373;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000373:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9539679	9539784	.	+	.	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.3,hg002_chrY_paternal_234.3;transcript_id=HG03009_ch_T0000373;gene_id=HG03009_ch_G0000139;Parent=HG03009_ch_T0000373;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000373:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9539785	9539866	.	+	.	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.3,hg002_chrY_paternal_234.3;transcript_id=HG03009_ch_T0000373;gene_id=HG03009_ch_G0000139;Parent=HG03009_ch_T0000373;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000373:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9539785	9539836	.	+	1	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.3,hg002_chrY_paternal_234.3;transcript_id=HG03009_ch_T0000373;gene_id=HG03009_ch_G0000139;Parent=HG03009_ch_T0000373;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000373:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	9539834	9539836	.	+	0	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.3,hg002_chrY_paternal_234.3;transcript_id=HG03009_ch_T0000373;gene_id=HG03009_ch_G0000139;Parent=HG03009_ch_T0000373;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=stop_codon:HG03009_ch_T0000373;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9539867	9540560	.	+	.	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.3,hg002_chrY_paternal_234.3;transcript_id=HG03009_ch_T0000373;gene_id=HG03009_ch_G0000139;Parent=HG03009_ch_T0000373;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000373:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9540561	9540772	.	+	.	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.3,hg002_chrY_paternal_234.3;transcript_id=HG03009_ch_T0000373;gene_id=HG03009_ch_G0000139;Parent=HG03009_ch_T0000373;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000373:5;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	9537975	9540772	1000	+	.	source_transcript=hg002_chrY_paternal_218.4;source_transcript_name=hg002_chrY_paternal_218.1;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_218.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.4,hg002_chrY_paternal_234.4;transcript_id=HG03009_ch_T0000374;gene_id=HG03009_ch_G0000139;Parent=HG03009_ch_G0000139;transcript_name=hg002_chrY_paternal_218.1;gene_name=TSPY10;ID=HG03009_ch_T0000374;Name=TSPY10
HG03009_chrY	CAT	exon	9537975	9538506	.	+	.	source_transcript=hg002_chrY_paternal_218.4;source_transcript_name=hg002_chrY_paternal_218.1;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_218.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.4,hg002_chrY_paternal_234.4;transcript_id=HG03009_ch_T0000374;gene_id=HG03009_ch_G0000139;Parent=HG03009_ch_T0000374;transcript_name=hg002_chrY_paternal_218.1;gene_name=TSPY10;ID=exon:HG03009_ch_T0000374:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9538507	9539113	.	+	.	source_transcript=hg002_chrY_paternal_218.4;source_transcript_name=hg002_chrY_paternal_218.1;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_218.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.4,hg002_chrY_paternal_234.4;transcript_id=HG03009_ch_T0000374;gene_id=HG03009_ch_G0000139;Parent=HG03009_ch_T0000374;transcript_name=hg002_chrY_paternal_218.1;gene_name=TSPY10;ID=intron:HG03009_ch_T0000374:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9539114	9539191	.	+	.	source_transcript=hg002_chrY_paternal_218.4;source_transcript_name=hg002_chrY_paternal_218.1;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_218.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.4,hg002_chrY_paternal_234.4;transcript_id=HG03009_ch_T0000374;gene_id=HG03009_ch_G0000139;Parent=HG03009_ch_T0000374;transcript_name=hg002_chrY_paternal_218.1;gene_name=TSPY10;ID=exon:HG03009_ch_T0000374:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9539192	9539319	.	+	.	source_transcript=hg002_chrY_paternal_218.4;source_transcript_name=hg002_chrY_paternal_218.1;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_218.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.4,hg002_chrY_paternal_234.4;transcript_id=HG03009_ch_T0000374;gene_id=HG03009_ch_G0000139;Parent=HG03009_ch_T0000374;transcript_name=hg002_chrY_paternal_218.1;gene_name=TSPY10;ID=intron:HG03009_ch_T0000374:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9539320	9539431	.	+	.	source_transcript=hg002_chrY_paternal_218.4;source_transcript_name=hg002_chrY_paternal_218.1;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_218.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.4,hg002_chrY_paternal_234.4;transcript_id=HG03009_ch_T0000374;gene_id=HG03009_ch_G0000139;Parent=HG03009_ch_T0000374;transcript_name=hg002_chrY_paternal_218.1;gene_name=TSPY10;ID=exon:HG03009_ch_T0000374:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9539432	9539539	.	+	.	source_transcript=hg002_chrY_paternal_218.4;source_transcript_name=hg002_chrY_paternal_218.1;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_218.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.4,hg002_chrY_paternal_234.4;transcript_id=HG03009_ch_T0000374;gene_id=HG03009_ch_G0000139;Parent=HG03009_ch_T0000374;transcript_name=hg002_chrY_paternal_218.1;gene_name=TSPY10;ID=intron:HG03009_ch_T0000374:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9539540	9539678	.	+	.	source_transcript=hg002_chrY_paternal_218.4;source_transcript_name=hg002_chrY_paternal_218.1;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_218.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.4,hg002_chrY_paternal_234.4;transcript_id=HG03009_ch_T0000374;gene_id=HG03009_ch_G0000139;Parent=HG03009_ch_T0000374;transcript_name=hg002_chrY_paternal_218.1;gene_name=TSPY10;ID=exon:HG03009_ch_T0000374:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9539679	9539773	.	+	.	source_transcript=hg002_chrY_paternal_218.4;source_transcript_name=hg002_chrY_paternal_218.1;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_218.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.4,hg002_chrY_paternal_234.4;transcript_id=HG03009_ch_T0000374;gene_id=HG03009_ch_G0000139;Parent=HG03009_ch_T0000374;transcript_name=hg002_chrY_paternal_218.1;gene_name=TSPY10;ID=intron:HG03009_ch_T0000374:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9539774	9539866	.	+	.	source_transcript=hg002_chrY_paternal_218.4;source_transcript_name=hg002_chrY_paternal_218.1;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_218.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.4,hg002_chrY_paternal_234.4;transcript_id=HG03009_ch_T0000374;gene_id=HG03009_ch_G0000139;Parent=HG03009_ch_T0000374;transcript_name=hg002_chrY_paternal_218.1;gene_name=TSPY10;ID=exon:HG03009_ch_T0000374:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9539867	9540560	.	+	.	source_transcript=hg002_chrY_paternal_218.4;source_transcript_name=hg002_chrY_paternal_218.1;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_218.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.4,hg002_chrY_paternal_234.4;transcript_id=HG03009_ch_T0000374;gene_id=HG03009_ch_G0000139;Parent=HG03009_ch_T0000374;transcript_name=hg002_chrY_paternal_218.1;gene_name=TSPY10;ID=intron:HG03009_ch_T0000374:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9540561	9540772	.	+	.	source_transcript=hg002_chrY_paternal_218.4;source_transcript_name=hg002_chrY_paternal_218.1;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_218.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.4,hg002_chrY_paternal_234.4;transcript_id=HG03009_ch_T0000374;gene_id=HG03009_ch_G0000139;Parent=HG03009_ch_T0000374;transcript_name=hg002_chrY_paternal_218.1;gene_name=TSPY10;ID=exon:HG03009_ch_T0000374:5;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	9550070	9555765	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_235;alternative_source_transcripts=hg002_chrY_paternal_235.1,hg002_chrY_paternal_235.1;gene_id=HG03009_ch_G0000140;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=HG03009_ch_G0000140;Name=FAM197Y2
HG03009_chrY	CAT	transcript	9550070	9555765	1000	-	.	source_transcript=hg002_chrY_paternal_235.1;source_transcript_name=hg002_chrY_paternal_235.1;source_gene=hg002_chrY_paternal_235;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_235;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_235.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_235.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_235.1,hg002_chrY_paternal_235.1;transcript_id=HG03009_ch_T0000375;gene_id=HG03009_ch_G0000140;Parent=HG03009_ch_G0000140;transcript_name=hg002_chrY_paternal_235.1;gene_name=FAM197Y2;ID=HG03009_ch_T0000375;Name=FAM197Y2
HG03009_chrY	CAT	exon	9550070	9550129	.	-	.	source_transcript=hg002_chrY_paternal_235.1;source_transcript_name=hg002_chrY_paternal_235.1;source_gene=hg002_chrY_paternal_235;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_235;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_235.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_235.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_235.1,hg002_chrY_paternal_235.1;transcript_id=HG03009_ch_T0000375;gene_id=HG03009_ch_G0000140;Parent=HG03009_ch_T0000375;transcript_name=hg002_chrY_paternal_235.1;gene_name=FAM197Y2;ID=exon:HG03009_ch_T0000375:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9550130	9553679	.	-	.	source_transcript=hg002_chrY_paternal_235.1;source_transcript_name=hg002_chrY_paternal_235.1;source_gene=hg002_chrY_paternal_235;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_235;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_235.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_235.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_235.1,hg002_chrY_paternal_235.1;transcript_id=HG03009_ch_T0000375;gene_id=HG03009_ch_G0000140;Parent=HG03009_ch_T0000375;transcript_name=hg002_chrY_paternal_235.1;gene_name=FAM197Y2;ID=intron:HG03009_ch_T0000375:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9553680	9553838	.	-	.	source_transcript=hg002_chrY_paternal_235.1;source_transcript_name=hg002_chrY_paternal_235.1;source_gene=hg002_chrY_paternal_235;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_235;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_235.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_235.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_235.1,hg002_chrY_paternal_235.1;transcript_id=HG03009_ch_T0000375;gene_id=HG03009_ch_G0000140;Parent=HG03009_ch_T0000375;transcript_name=hg002_chrY_paternal_235.1;gene_name=FAM197Y2;ID=exon:HG03009_ch_T0000375:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9553839	9555342	.	-	.	source_transcript=hg002_chrY_paternal_235.1;source_transcript_name=hg002_chrY_paternal_235.1;source_gene=hg002_chrY_paternal_235;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_235;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_235.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_235.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_235.1,hg002_chrY_paternal_235.1;transcript_id=HG03009_ch_T0000375;gene_id=HG03009_ch_G0000140;Parent=HG03009_ch_T0000375;transcript_name=hg002_chrY_paternal_235.1;gene_name=FAM197Y2;ID=intron:HG03009_ch_T0000375:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9555343	9555488	.	-	.	source_transcript=hg002_chrY_paternal_235.1;source_transcript_name=hg002_chrY_paternal_235.1;source_gene=hg002_chrY_paternal_235;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_235;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_235.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_235.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_235.1,hg002_chrY_paternal_235.1;transcript_id=HG03009_ch_T0000375;gene_id=HG03009_ch_G0000140;Parent=HG03009_ch_T0000375;transcript_name=hg002_chrY_paternal_235.1;gene_name=FAM197Y2;ID=exon:HG03009_ch_T0000375:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9555489	9555574	.	-	.	source_transcript=hg002_chrY_paternal_235.1;source_transcript_name=hg002_chrY_paternal_235.1;source_gene=hg002_chrY_paternal_235;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_235;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_235.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_235.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_235.1,hg002_chrY_paternal_235.1;transcript_id=HG03009_ch_T0000375;gene_id=HG03009_ch_G0000140;Parent=HG03009_ch_T0000375;transcript_name=hg002_chrY_paternal_235.1;gene_name=FAM197Y2;ID=intron:HG03009_ch_T0000375:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9555575	9555765	.	-	.	source_transcript=hg002_chrY_paternal_235.1;source_transcript_name=hg002_chrY_paternal_235.1;source_gene=hg002_chrY_paternal_235;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_235;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_235.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_235.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_235.1,hg002_chrY_paternal_235.1;transcript_id=HG03009_ch_T0000375;gene_id=HG03009_ch_G0000140;Parent=HG03009_ch_T0000375;transcript_name=hg002_chrY_paternal_235.1;gene_name=FAM197Y2;ID=exon:HG03009_ch_T0000375:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	9558289	9561085	.	+	.	source_gene_common_name=TSPY10P;source_gene=hg002_chrY_paternal_236;alternative_source_transcripts=hg002_chrY_paternal_236.1,hg002_chrY_paternal_236.1;gene_id=HG03009_ch_G0000141;gene_biotype=pseudogene;gene_name=TSPY10P;gene_sources=liftoff,augTM;ID=HG03009_ch_G0000141;Name=TSPY10P
HG03009_chrY	CAT	transcript	9558289	9561085	1000	+	.	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1,hg002_chrY_paternal_236.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000376;gene_id=HG03009_ch_G0000141;Parent=HG03009_ch_G0000141;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=HG03009_ch_T0000376;Name=TSPY10P
HG03009_chrY	CAT	exon	9558289	9558820	.	+	.	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1,hg002_chrY_paternal_236.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000376;gene_id=HG03009_ch_G0000141;Parent=HG03009_ch_T0000376;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG03009_ch_T0000376:0;Name=TSPY10P;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9558335	9558820	.	+	0	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1,hg002_chrY_paternal_236.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000376;gene_id=HG03009_ch_G0000141;Parent=HG03009_ch_T0000376;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=CDS:HG03009_ch_T0000376:0;Name=TSPY10P;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	9558335	9558337	.	+	0	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1,hg002_chrY_paternal_236.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000376;gene_id=HG03009_ch_G0000141;Parent=HG03009_ch_T0000376;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=start_codon:HG03009_ch_T0000376;Name=TSPY10P;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9558821	9559427	.	+	.	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1,hg002_chrY_paternal_236.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000376;gene_id=HG03009_ch_G0000141;Parent=HG03009_ch_T0000376;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:HG03009_ch_T0000376:0;Name=TSPY10P;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9559428	9559505	.	+	.	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1,hg002_chrY_paternal_236.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000376;gene_id=HG03009_ch_G0000141;Parent=HG03009_ch_T0000376;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG03009_ch_T0000376:1;Name=TSPY10P;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9559428	9559505	.	+	0	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1,hg002_chrY_paternal_236.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000376;gene_id=HG03009_ch_G0000141;Parent=HG03009_ch_T0000376;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=CDS:HG03009_ch_T0000376:1;Name=TSPY10P;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9559506	9559633	.	+	.	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1,hg002_chrY_paternal_236.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000376;gene_id=HG03009_ch_G0000141;Parent=HG03009_ch_T0000376;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:HG03009_ch_T0000376:1;Name=TSPY10P;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9559634	9559745	.	+	.	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1,hg002_chrY_paternal_236.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000376;gene_id=HG03009_ch_G0000141;Parent=HG03009_ch_T0000376;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG03009_ch_T0000376:2;Name=TSPY10P;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9559634	9559745	.	+	0	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1,hg002_chrY_paternal_236.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000376;gene_id=HG03009_ch_G0000141;Parent=HG03009_ch_T0000376;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=CDS:HG03009_ch_T0000376:2;Name=TSPY10P;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9559746	9559846	.	+	.	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1,hg002_chrY_paternal_236.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000376;gene_id=HG03009_ch_G0000141;Parent=HG03009_ch_T0000376;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:HG03009_ch_T0000376:2;Name=TSPY10P;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9559847	9559992	.	+	.	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1,hg002_chrY_paternal_236.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000376;gene_id=HG03009_ch_G0000141;Parent=HG03009_ch_T0000376;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG03009_ch_T0000376:3;Name=TSPY10P;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9559847	9559881	.	+	2	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1,hg002_chrY_paternal_236.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000376;gene_id=HG03009_ch_G0000141;Parent=HG03009_ch_T0000376;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=CDS:HG03009_ch_T0000376:3;Name=TSPY10P;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	9559879	9559881	.	+	0	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1,hg002_chrY_paternal_236.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000376;gene_id=HG03009_ch_G0000141;Parent=HG03009_ch_T0000376;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=stop_codon:HG03009_ch_T0000376;Name=TSPY10P;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9559993	9560098	.	+	.	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1,hg002_chrY_paternal_236.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000376;gene_id=HG03009_ch_G0000141;Parent=HG03009_ch_T0000376;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:HG03009_ch_T0000376:3;Name=TSPY10P;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9560099	9560180	.	+	.	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1,hg002_chrY_paternal_236.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000376;gene_id=HG03009_ch_G0000141;Parent=HG03009_ch_T0000376;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG03009_ch_T0000376:4;Name=TSPY10P;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9560181	9560874	.	+	.	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1,hg002_chrY_paternal_236.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000376;gene_id=HG03009_ch_G0000141;Parent=HG03009_ch_T0000376;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:HG03009_ch_T0000376:4;Name=TSPY10P;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9560875	9561085	.	+	.	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1,hg002_chrY_paternal_236.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000376;gene_id=HG03009_ch_G0000141;Parent=HG03009_ch_T0000376;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG03009_ch_T0000376:5;Name=TSPY10P;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	9558289	9561085	1000	+	.	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2,hg002_chrY_paternal_236.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000377;gene_id=HG03009_ch_G0000141;Parent=HG03009_ch_G0000141;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=HG03009_ch_T0000377;Name=TSPY10P
HG03009_chrY	CAT	exon	9558289	9558820	.	+	.	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2,hg002_chrY_paternal_236.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000377;gene_id=HG03009_ch_G0000141;Parent=HG03009_ch_T0000377;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG03009_ch_T0000377:0;Name=TSPY10P;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9558335	9558820	.	+	0	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2,hg002_chrY_paternal_236.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000377;gene_id=HG03009_ch_G0000141;Parent=HG03009_ch_T0000377;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=CDS:HG03009_ch_T0000377:0;Name=TSPY10P;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	9558335	9558337	.	+	0	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2,hg002_chrY_paternal_236.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000377;gene_id=HG03009_ch_G0000141;Parent=HG03009_ch_T0000377;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=start_codon:HG03009_ch_T0000377;Name=TSPY10P;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9558821	9559427	.	+	.	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2,hg002_chrY_paternal_236.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000377;gene_id=HG03009_ch_G0000141;Parent=HG03009_ch_T0000377;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:HG03009_ch_T0000377:0;Name=TSPY10P;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9559428	9559505	.	+	.	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2,hg002_chrY_paternal_236.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000377;gene_id=HG03009_ch_G0000141;Parent=HG03009_ch_T0000377;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG03009_ch_T0000377:1;Name=TSPY10P;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9559428	9559505	.	+	0	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2,hg002_chrY_paternal_236.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000377;gene_id=HG03009_ch_G0000141;Parent=HG03009_ch_T0000377;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=CDS:HG03009_ch_T0000377:1;Name=TSPY10P;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9559506	9559633	.	+	.	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2,hg002_chrY_paternal_236.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000377;gene_id=HG03009_ch_G0000141;Parent=HG03009_ch_T0000377;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:HG03009_ch_T0000377:1;Name=TSPY10P;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9559634	9559745	.	+	.	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2,hg002_chrY_paternal_236.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000377;gene_id=HG03009_ch_G0000141;Parent=HG03009_ch_T0000377;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG03009_ch_T0000377:2;Name=TSPY10P;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9559634	9559745	.	+	0	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2,hg002_chrY_paternal_236.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000377;gene_id=HG03009_ch_G0000141;Parent=HG03009_ch_T0000377;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=CDS:HG03009_ch_T0000377:2;Name=TSPY10P;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9559746	9559846	.	+	.	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2,hg002_chrY_paternal_236.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000377;gene_id=HG03009_ch_G0000141;Parent=HG03009_ch_T0000377;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:HG03009_ch_T0000377:2;Name=TSPY10P;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9559847	9559992	.	+	.	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2,hg002_chrY_paternal_236.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000377;gene_id=HG03009_ch_G0000141;Parent=HG03009_ch_T0000377;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG03009_ch_T0000377:3;Name=TSPY10P;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9559847	9559881	.	+	2	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2,hg002_chrY_paternal_236.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000377;gene_id=HG03009_ch_G0000141;Parent=HG03009_ch_T0000377;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=CDS:HG03009_ch_T0000377:3;Name=TSPY10P;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	9559879	9559881	.	+	0	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2,hg002_chrY_paternal_236.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000377;gene_id=HG03009_ch_G0000141;Parent=HG03009_ch_T0000377;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=stop_codon:HG03009_ch_T0000377;Name=TSPY10P;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9559993	9560087	.	+	.	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2,hg002_chrY_paternal_236.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000377;gene_id=HG03009_ch_G0000141;Parent=HG03009_ch_T0000377;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:HG03009_ch_T0000377:3;Name=TSPY10P;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9560088	9560180	.	+	.	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2,hg002_chrY_paternal_236.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000377;gene_id=HG03009_ch_G0000141;Parent=HG03009_ch_T0000377;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG03009_ch_T0000377:4;Name=TSPY10P;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9560181	9560874	.	+	.	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2,hg002_chrY_paternal_236.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000377;gene_id=HG03009_ch_G0000141;Parent=HG03009_ch_T0000377;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:HG03009_ch_T0000377:4;Name=TSPY10P;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9560875	9561085	.	+	.	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2,hg002_chrY_paternal_236.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000377;gene_id=HG03009_ch_G0000141;Parent=HG03009_ch_T0000377;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG03009_ch_T0000377:5;Name=TSPY10P;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	9558289	9561085	1000	+	.	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3,hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000378;gene_id=HG03009_ch_G0000141;Parent=HG03009_ch_G0000141;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=HG03009_ch_T0000378;Name=TSPY10P
HG03009_chrY	CAT	exon	9558289	9558820	.	+	.	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3,hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000378;gene_id=HG03009_ch_G0000141;Parent=HG03009_ch_T0000378;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG03009_ch_T0000378:0;Name=TSPY10P;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9558335	9558820	.	+	0	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3,hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000378;gene_id=HG03009_ch_G0000141;Parent=HG03009_ch_T0000378;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=CDS:HG03009_ch_T0000378:0;Name=TSPY10P;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	9558335	9558337	.	+	0	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3,hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000378;gene_id=HG03009_ch_G0000141;Parent=HG03009_ch_T0000378;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=start_codon:HG03009_ch_T0000378;Name=TSPY10P;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9558821	9559427	.	+	.	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3,hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000378;gene_id=HG03009_ch_G0000141;Parent=HG03009_ch_T0000378;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:HG03009_ch_T0000378:0;Name=TSPY10P;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9559428	9559505	.	+	.	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3,hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000378;gene_id=HG03009_ch_G0000141;Parent=HG03009_ch_T0000378;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG03009_ch_T0000378:1;Name=TSPY10P;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9559428	9559505	.	+	0	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3,hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000378;gene_id=HG03009_ch_G0000141;Parent=HG03009_ch_T0000378;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=CDS:HG03009_ch_T0000378:1;Name=TSPY10P;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9559506	9559633	.	+	.	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3,hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000378;gene_id=HG03009_ch_G0000141;Parent=HG03009_ch_T0000378;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:HG03009_ch_T0000378:1;Name=TSPY10P;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9559634	9559745	.	+	.	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3,hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000378;gene_id=HG03009_ch_G0000141;Parent=HG03009_ch_T0000378;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG03009_ch_T0000378:2;Name=TSPY10P;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9559634	9559745	.	+	0	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3,hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000378;gene_id=HG03009_ch_G0000141;Parent=HG03009_ch_T0000378;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=CDS:HG03009_ch_T0000378:2;Name=TSPY10P;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9559746	9559853	.	+	.	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3,hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000378;gene_id=HG03009_ch_G0000141;Parent=HG03009_ch_T0000378;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:HG03009_ch_T0000378:2;Name=TSPY10P;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9559854	9559992	.	+	.	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3,hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000378;gene_id=HG03009_ch_G0000141;Parent=HG03009_ch_T0000378;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG03009_ch_T0000378:3;Name=TSPY10P;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9559854	9559992	.	+	2	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3,hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000378;gene_id=HG03009_ch_G0000141;Parent=HG03009_ch_T0000378;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=CDS:HG03009_ch_T0000378:3;Name=TSPY10P;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9559993	9560098	.	+	.	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3,hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000378;gene_id=HG03009_ch_G0000141;Parent=HG03009_ch_T0000378;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:HG03009_ch_T0000378:3;Name=TSPY10P;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9560099	9560180	.	+	.	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3,hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000378;gene_id=HG03009_ch_G0000141;Parent=HG03009_ch_T0000378;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG03009_ch_T0000378:4;Name=TSPY10P;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9560099	9560150	.	+	1	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3,hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000378;gene_id=HG03009_ch_G0000141;Parent=HG03009_ch_T0000378;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=CDS:HG03009_ch_T0000378:4;Name=TSPY10P;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	9560148	9560150	.	+	0	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3,hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000378;gene_id=HG03009_ch_G0000141;Parent=HG03009_ch_T0000378;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=stop_codon:HG03009_ch_T0000378;Name=TSPY10P;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9560181	9560874	.	+	.	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3,hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000378;gene_id=HG03009_ch_G0000141;Parent=HG03009_ch_T0000378;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:HG03009_ch_T0000378:4;Name=TSPY10P;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9560875	9561085	.	+	.	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3,hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000378;gene_id=HG03009_ch_G0000141;Parent=HG03009_ch_T0000378;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG03009_ch_T0000378:5;Name=TSPY10P;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	9558289	9561085	1000	+	.	source_transcript=hg002_chrY_paternal_236.4;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.4,hg002_chrY_paternal_236.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000379;gene_id=HG03009_ch_G0000141;Parent=HG03009_ch_G0000141;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=HG03009_ch_T0000379;Name=TSPY10P
HG03009_chrY	CAT	exon	9558289	9558820	.	+	.	source_transcript=hg002_chrY_paternal_236.4;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.4,hg002_chrY_paternal_236.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000379;gene_id=HG03009_ch_G0000141;Parent=HG03009_ch_T0000379;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG03009_ch_T0000379:0;Name=TSPY10P;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9558821	9559427	.	+	.	source_transcript=hg002_chrY_paternal_236.4;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.4,hg002_chrY_paternal_236.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000379;gene_id=HG03009_ch_G0000141;Parent=HG03009_ch_T0000379;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:HG03009_ch_T0000379:0;Name=TSPY10P;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9559428	9559505	.	+	.	source_transcript=hg002_chrY_paternal_236.4;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.4,hg002_chrY_paternal_236.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000379;gene_id=HG03009_ch_G0000141;Parent=HG03009_ch_T0000379;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG03009_ch_T0000379:1;Name=TSPY10P;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9559506	9559633	.	+	.	source_transcript=hg002_chrY_paternal_236.4;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.4,hg002_chrY_paternal_236.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000379;gene_id=HG03009_ch_G0000141;Parent=HG03009_ch_T0000379;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:HG03009_ch_T0000379:1;Name=TSPY10P;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9559634	9559745	.	+	.	source_transcript=hg002_chrY_paternal_236.4;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.4,hg002_chrY_paternal_236.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000379;gene_id=HG03009_ch_G0000141;Parent=HG03009_ch_T0000379;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG03009_ch_T0000379:2;Name=TSPY10P;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9559746	9559853	.	+	.	source_transcript=hg002_chrY_paternal_236.4;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.4,hg002_chrY_paternal_236.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000379;gene_id=HG03009_ch_G0000141;Parent=HG03009_ch_T0000379;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:HG03009_ch_T0000379:2;Name=TSPY10P;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9559854	9559992	.	+	.	source_transcript=hg002_chrY_paternal_236.4;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.4,hg002_chrY_paternal_236.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000379;gene_id=HG03009_ch_G0000141;Parent=HG03009_ch_T0000379;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG03009_ch_T0000379:3;Name=TSPY10P;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9559993	9560087	.	+	.	source_transcript=hg002_chrY_paternal_236.4;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.4,hg002_chrY_paternal_236.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000379;gene_id=HG03009_ch_G0000141;Parent=HG03009_ch_T0000379;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:HG03009_ch_T0000379:3;Name=TSPY10P;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9560088	9560180	.	+	.	source_transcript=hg002_chrY_paternal_236.4;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.4,hg002_chrY_paternal_236.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000379;gene_id=HG03009_ch_G0000141;Parent=HG03009_ch_T0000379;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG03009_ch_T0000379:4;Name=TSPY10P;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9560181	9560874	.	+	.	source_transcript=hg002_chrY_paternal_236.4;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.4,hg002_chrY_paternal_236.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000379;gene_id=HG03009_ch_G0000141;Parent=HG03009_ch_T0000379;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:HG03009_ch_T0000379:4;Name=TSPY10P;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9560875	9561085	.	+	.	source_transcript=hg002_chrY_paternal_236.4;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.4,hg002_chrY_paternal_236.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000379;gene_id=HG03009_ch_G0000141;Parent=HG03009_ch_T0000379;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG03009_ch_T0000379:5;Name=TSPY10P;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	9570403	9575995	.	-	.	source_gene_common_name=FAM197Y3;source_gene=hg002_chrY_paternal_237;alternative_source_transcripts=hg002_chrY_paternal_237.1,hg002_chrY_paternal_237.1;gene_id=HG03009_ch_G0000142;gene_biotype=lncRNA;gene_name=FAM197Y3;gene_sources=liftoff;ID=HG03009_ch_G0000142;Name=FAM197Y3
HG03009_chrY	CAT	transcript	9570403	9575995	1000	-	.	source_transcript=hg002_chrY_paternal_237.1;source_transcript_name=hg002_chrY_paternal_237.1;source_gene=hg002_chrY_paternal_237;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_237;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_237.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_237.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_237.1,hg002_chrY_paternal_237.1;transcript_id=HG03009_ch_T0000380;gene_id=HG03009_ch_G0000142;Parent=HG03009_ch_G0000142;transcript_name=hg002_chrY_paternal_237.1;gene_name=FAM197Y3;ID=HG03009_ch_T0000380;Name=FAM197Y3
HG03009_chrY	CAT	exon	9570403	9570462	.	-	.	source_transcript=hg002_chrY_paternal_237.1;source_transcript_name=hg002_chrY_paternal_237.1;source_gene=hg002_chrY_paternal_237;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_237;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_237.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_237.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_237.1,hg002_chrY_paternal_237.1;transcript_id=HG03009_ch_T0000380;gene_id=HG03009_ch_G0000142;Parent=HG03009_ch_T0000380;transcript_name=hg002_chrY_paternal_237.1;gene_name=FAM197Y3;ID=exon:HG03009_ch_T0000380:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9570463	9574011	.	-	.	source_transcript=hg002_chrY_paternal_237.1;source_transcript_name=hg002_chrY_paternal_237.1;source_gene=hg002_chrY_paternal_237;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_237;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_237.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_237.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_237.1,hg002_chrY_paternal_237.1;transcript_id=HG03009_ch_T0000380;gene_id=HG03009_ch_G0000142;Parent=HG03009_ch_T0000380;transcript_name=hg002_chrY_paternal_237.1;gene_name=FAM197Y3;ID=intron:HG03009_ch_T0000380:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9574012	9574170	.	-	.	source_transcript=hg002_chrY_paternal_237.1;source_transcript_name=hg002_chrY_paternal_237.1;source_gene=hg002_chrY_paternal_237;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_237;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_237.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_237.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_237.1,hg002_chrY_paternal_237.1;transcript_id=HG03009_ch_T0000380;gene_id=HG03009_ch_G0000142;Parent=HG03009_ch_T0000380;transcript_name=hg002_chrY_paternal_237.1;gene_name=FAM197Y3;ID=exon:HG03009_ch_T0000380:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9574171	9575661	.	-	.	source_transcript=hg002_chrY_paternal_237.1;source_transcript_name=hg002_chrY_paternal_237.1;source_gene=hg002_chrY_paternal_237;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_237;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_237.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_237.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_237.1,hg002_chrY_paternal_237.1;transcript_id=HG03009_ch_T0000380;gene_id=HG03009_ch_G0000142;Parent=HG03009_ch_T0000380;transcript_name=hg002_chrY_paternal_237.1;gene_name=FAM197Y3;ID=intron:HG03009_ch_T0000380:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9575662	9575807	.	-	.	source_transcript=hg002_chrY_paternal_237.1;source_transcript_name=hg002_chrY_paternal_237.1;source_gene=hg002_chrY_paternal_237;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_237;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_237.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_237.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_237.1,hg002_chrY_paternal_237.1;transcript_id=HG03009_ch_T0000380;gene_id=HG03009_ch_G0000142;Parent=HG03009_ch_T0000380;transcript_name=hg002_chrY_paternal_237.1;gene_name=FAM197Y3;ID=exon:HG03009_ch_T0000380:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9575808	9575893	.	-	.	source_transcript=hg002_chrY_paternal_237.1;source_transcript_name=hg002_chrY_paternal_237.1;source_gene=hg002_chrY_paternal_237;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_237;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_237.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_237.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_237.1,hg002_chrY_paternal_237.1;transcript_id=HG03009_ch_T0000380;gene_id=HG03009_ch_G0000142;Parent=HG03009_ch_T0000380;transcript_name=hg002_chrY_paternal_237.1;gene_name=FAM197Y3;ID=intron:HG03009_ch_T0000380:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9575894	9575995	.	-	.	source_transcript=hg002_chrY_paternal_237.1;source_transcript_name=hg002_chrY_paternal_237.1;source_gene=hg002_chrY_paternal_237;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_237;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_237.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_237.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_237.1,hg002_chrY_paternal_237.1;transcript_id=HG03009_ch_T0000380;gene_id=HG03009_ch_G0000142;Parent=HG03009_ch_T0000380;transcript_name=hg002_chrY_paternal_237.1;gene_name=FAM197Y3;ID=exon:HG03009_ch_T0000380:3;Name=FAM197Y3;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	9578605	9581401	.	+	.	source_gene_common_name=TSPY10;source_gene=hg002_chrY_paternal_212;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_238.1;gene_id=HG03009_ch_G0000143;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff;ID=HG03009_ch_G0000143;Name=TSPY10
HG03009_chrY	CAT	transcript	9578605	9581401	10000	+	.	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_238.1;transcript_id=HG03009_ch_T0000381;gene_id=HG03009_ch_G0000143;Parent=HG03009_ch_G0000143;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=HG03009_ch_T0000381;Name=TSPY10
HG03009_chrY	CAT	exon	9578605	9579136	.	+	.	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_238.1;transcript_id=HG03009_ch_T0000381;gene_id=HG03009_ch_G0000143;Parent=HG03009_ch_T0000381;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000381:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9578651	9579136	.	+	0	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_238.1;transcript_id=HG03009_ch_T0000381;gene_id=HG03009_ch_G0000143;Parent=HG03009_ch_T0000381;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000381:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	9578651	9578653	.	+	0	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_238.1;transcript_id=HG03009_ch_T0000381;gene_id=HG03009_ch_G0000143;Parent=HG03009_ch_T0000381;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=start_codon:HG03009_ch_T0000381;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9579137	9579743	.	+	.	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_238.1;transcript_id=HG03009_ch_T0000381;gene_id=HG03009_ch_G0000143;Parent=HG03009_ch_T0000381;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000381:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9579744	9579821	.	+	.	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_238.1;transcript_id=HG03009_ch_T0000381;gene_id=HG03009_ch_G0000143;Parent=HG03009_ch_T0000381;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000381:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9579744	9579821	.	+	0	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_238.1;transcript_id=HG03009_ch_T0000381;gene_id=HG03009_ch_G0000143;Parent=HG03009_ch_T0000381;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000381:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9579822	9579949	.	+	.	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_238.1;transcript_id=HG03009_ch_T0000381;gene_id=HG03009_ch_G0000143;Parent=HG03009_ch_T0000381;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000381:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9579950	9580061	.	+	.	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_238.1;transcript_id=HG03009_ch_T0000381;gene_id=HG03009_ch_G0000143;Parent=HG03009_ch_T0000381;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000381:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9579950	9580061	.	+	0	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_238.1;transcript_id=HG03009_ch_T0000381;gene_id=HG03009_ch_G0000143;Parent=HG03009_ch_T0000381;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000381:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9580062	9580162	.	+	.	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_238.1;transcript_id=HG03009_ch_T0000381;gene_id=HG03009_ch_G0000143;Parent=HG03009_ch_T0000381;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000381:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9580163	9580308	.	+	.	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_238.1;transcript_id=HG03009_ch_T0000381;gene_id=HG03009_ch_G0000143;Parent=HG03009_ch_T0000381;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000381:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9580163	9580308	.	+	2	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_238.1;transcript_id=HG03009_ch_T0000381;gene_id=HG03009_ch_G0000143;Parent=HG03009_ch_T0000381;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000381:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9580309	9580414	.	+	.	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_238.1;transcript_id=HG03009_ch_T0000381;gene_id=HG03009_ch_G0000143;Parent=HG03009_ch_T0000381;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000381:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9580415	9580496	.	+	.	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_238.1;transcript_id=HG03009_ch_T0000381;gene_id=HG03009_ch_G0000143;Parent=HG03009_ch_T0000381;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000381:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9580415	9580496	.	+	0	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_238.1;transcript_id=HG03009_ch_T0000381;gene_id=HG03009_ch_G0000143;Parent=HG03009_ch_T0000381;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000381:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9580497	9581190	.	+	.	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_238.1;transcript_id=HG03009_ch_T0000381;gene_id=HG03009_ch_G0000143;Parent=HG03009_ch_T0000381;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000381:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9581191	9581401	.	+	.	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_238.1;transcript_id=HG03009_ch_T0000381;gene_id=HG03009_ch_G0000143;Parent=HG03009_ch_T0000381;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000381:5;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9581191	9581213	.	+	2	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_238.1;transcript_id=HG03009_ch_T0000381;gene_id=HG03009_ch_G0000143;Parent=HG03009_ch_T0000381;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000381:5;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	9581211	9581213	.	+	0	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_238.1;transcript_id=HG03009_ch_T0000381;gene_id=HG03009_ch_G0000143;Parent=HG03009_ch_T0000381;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=stop_codon:HG03009_ch_T0000381;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	9578605	9581401	10000	+	.	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_238.2;transcript_id=HG03009_ch_T0000382;gene_id=HG03009_ch_G0000143;Parent=HG03009_ch_G0000143;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=HG03009_ch_T0000382;Name=TSPY10
HG03009_chrY	CAT	exon	9578605	9579136	.	+	.	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_238.2;transcript_id=HG03009_ch_T0000382;gene_id=HG03009_ch_G0000143;Parent=HG03009_ch_T0000382;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000382:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9578651	9579136	.	+	0	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_238.2;transcript_id=HG03009_ch_T0000382;gene_id=HG03009_ch_G0000143;Parent=HG03009_ch_T0000382;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000382:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	9578651	9578653	.	+	0	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_238.2;transcript_id=HG03009_ch_T0000382;gene_id=HG03009_ch_G0000143;Parent=HG03009_ch_T0000382;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=start_codon:HG03009_ch_T0000382;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9579137	9579743	.	+	.	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_238.2;transcript_id=HG03009_ch_T0000382;gene_id=HG03009_ch_G0000143;Parent=HG03009_ch_T0000382;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000382:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9579744	9579821	.	+	.	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_238.2;transcript_id=HG03009_ch_T0000382;gene_id=HG03009_ch_G0000143;Parent=HG03009_ch_T0000382;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000382:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9579744	9579821	.	+	0	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_238.2;transcript_id=HG03009_ch_T0000382;gene_id=HG03009_ch_G0000143;Parent=HG03009_ch_T0000382;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000382:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9579822	9579949	.	+	.	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_238.2;transcript_id=HG03009_ch_T0000382;gene_id=HG03009_ch_G0000143;Parent=HG03009_ch_T0000382;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000382:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9579950	9580061	.	+	.	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_238.2;transcript_id=HG03009_ch_T0000382;gene_id=HG03009_ch_G0000143;Parent=HG03009_ch_T0000382;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000382:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9579950	9580061	.	+	0	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_238.2;transcript_id=HG03009_ch_T0000382;gene_id=HG03009_ch_G0000143;Parent=HG03009_ch_T0000382;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000382:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9580062	9580162	.	+	.	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_238.2;transcript_id=HG03009_ch_T0000382;gene_id=HG03009_ch_G0000143;Parent=HG03009_ch_T0000382;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000382:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9580163	9580308	.	+	.	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_238.2;transcript_id=HG03009_ch_T0000382;gene_id=HG03009_ch_G0000143;Parent=HG03009_ch_T0000382;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000382:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9580163	9580308	.	+	2	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_238.2;transcript_id=HG03009_ch_T0000382;gene_id=HG03009_ch_G0000143;Parent=HG03009_ch_T0000382;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000382:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9580309	9580403	.	+	.	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_238.2;transcript_id=HG03009_ch_T0000382;gene_id=HG03009_ch_G0000143;Parent=HG03009_ch_T0000382;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000382:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9580404	9580496	.	+	.	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_238.2;transcript_id=HG03009_ch_T0000382;gene_id=HG03009_ch_G0000143;Parent=HG03009_ch_T0000382;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000382:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9580404	9580466	.	+	0	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_238.2;transcript_id=HG03009_ch_T0000382;gene_id=HG03009_ch_G0000143;Parent=HG03009_ch_T0000382;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000382:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	9580464	9580466	.	+	0	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_238.2;transcript_id=HG03009_ch_T0000382;gene_id=HG03009_ch_G0000143;Parent=HG03009_ch_T0000382;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=stop_codon:HG03009_ch_T0000382;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9580497	9581190	.	+	.	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_238.2;transcript_id=HG03009_ch_T0000382;gene_id=HG03009_ch_G0000143;Parent=HG03009_ch_T0000382;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000382:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9581191	9581401	.	+	.	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_238.2;transcript_id=HG03009_ch_T0000382;gene_id=HG03009_ch_G0000143;Parent=HG03009_ch_T0000382;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000382:5;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	9578605	9581401	10000	+	.	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_238.3;transcript_id=HG03009_ch_T0000383;gene_id=HG03009_ch_G0000143;Parent=HG03009_ch_G0000143;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=HG03009_ch_T0000383;Name=TSPY10
HG03009_chrY	CAT	exon	9578605	9579136	.	+	.	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_238.3;transcript_id=HG03009_ch_T0000383;gene_id=HG03009_ch_G0000143;Parent=HG03009_ch_T0000383;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000383:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9578651	9579136	.	+	0	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_238.3;transcript_id=HG03009_ch_T0000383;gene_id=HG03009_ch_G0000143;Parent=HG03009_ch_T0000383;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000383:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	9578651	9578653	.	+	0	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_238.3;transcript_id=HG03009_ch_T0000383;gene_id=HG03009_ch_G0000143;Parent=HG03009_ch_T0000383;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=start_codon:HG03009_ch_T0000383;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9579137	9579743	.	+	.	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_238.3;transcript_id=HG03009_ch_T0000383;gene_id=HG03009_ch_G0000143;Parent=HG03009_ch_T0000383;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000383:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9579744	9579821	.	+	.	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_238.3;transcript_id=HG03009_ch_T0000383;gene_id=HG03009_ch_G0000143;Parent=HG03009_ch_T0000383;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000383:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9579744	9579821	.	+	0	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_238.3;transcript_id=HG03009_ch_T0000383;gene_id=HG03009_ch_G0000143;Parent=HG03009_ch_T0000383;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000383:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9579822	9579949	.	+	.	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_238.3;transcript_id=HG03009_ch_T0000383;gene_id=HG03009_ch_G0000143;Parent=HG03009_ch_T0000383;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000383:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9579950	9580061	.	+	.	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_238.3;transcript_id=HG03009_ch_T0000383;gene_id=HG03009_ch_G0000143;Parent=HG03009_ch_T0000383;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000383:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9579950	9580061	.	+	0	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_238.3;transcript_id=HG03009_ch_T0000383;gene_id=HG03009_ch_G0000143;Parent=HG03009_ch_T0000383;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000383:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9580062	9580169	.	+	.	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_238.3;transcript_id=HG03009_ch_T0000383;gene_id=HG03009_ch_G0000143;Parent=HG03009_ch_T0000383;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000383:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9580170	9580308	.	+	.	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_238.3;transcript_id=HG03009_ch_T0000383;gene_id=HG03009_ch_G0000143;Parent=HG03009_ch_T0000383;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000383:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9580170	9580308	.	+	2	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_238.3;transcript_id=HG03009_ch_T0000383;gene_id=HG03009_ch_G0000143;Parent=HG03009_ch_T0000383;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000383:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9580309	9580414	.	+	.	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_238.3;transcript_id=HG03009_ch_T0000383;gene_id=HG03009_ch_G0000143;Parent=HG03009_ch_T0000383;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000383:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9580415	9580496	.	+	.	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_238.3;transcript_id=HG03009_ch_T0000383;gene_id=HG03009_ch_G0000143;Parent=HG03009_ch_T0000383;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000383:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9580415	9580466	.	+	1	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_238.3;transcript_id=HG03009_ch_T0000383;gene_id=HG03009_ch_G0000143;Parent=HG03009_ch_T0000383;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=CDS:HG03009_ch_T0000383:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	9580464	9580466	.	+	0	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_238.3;transcript_id=HG03009_ch_T0000383;gene_id=HG03009_ch_G0000143;Parent=HG03009_ch_T0000383;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=stop_codon:HG03009_ch_T0000383;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9580497	9581190	.	+	.	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_238.3;transcript_id=HG03009_ch_T0000383;gene_id=HG03009_ch_G0000143;Parent=HG03009_ch_T0000383;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=intron:HG03009_ch_T0000383:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9581191	9581401	.	+	.	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_238.3;transcript_id=HG03009_ch_T0000383;gene_id=HG03009_ch_G0000143;Parent=HG03009_ch_T0000383;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:HG03009_ch_T0000383:5;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	9578605	9581401	1000	+	.	source_transcript=hg002_chrY_paternal_212.4;source_transcript_name=hg002_chrY_paternal_212.1;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_212.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.4,hg002_chrY_paternal_238.4;transcript_id=HG03009_ch_T0000384;gene_id=HG03009_ch_G0000143;Parent=HG03009_ch_G0000143;transcript_name=hg002_chrY_paternal_212.1;gene_name=TSPY10;ID=HG03009_ch_T0000384;Name=TSPY10
HG03009_chrY	CAT	exon	9578605	9579136	.	+	.	source_transcript=hg002_chrY_paternal_212.4;source_transcript_name=hg002_chrY_paternal_212.1;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_212.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.4,hg002_chrY_paternal_238.4;transcript_id=HG03009_ch_T0000384;gene_id=HG03009_ch_G0000143;Parent=HG03009_ch_T0000384;transcript_name=hg002_chrY_paternal_212.1;gene_name=TSPY10;ID=exon:HG03009_ch_T0000384:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9579137	9579743	.	+	.	source_transcript=hg002_chrY_paternal_212.4;source_transcript_name=hg002_chrY_paternal_212.1;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_212.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.4,hg002_chrY_paternal_238.4;transcript_id=HG03009_ch_T0000384;gene_id=HG03009_ch_G0000143;Parent=HG03009_ch_T0000384;transcript_name=hg002_chrY_paternal_212.1;gene_name=TSPY10;ID=intron:HG03009_ch_T0000384:0;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9579744	9579821	.	+	.	source_transcript=hg002_chrY_paternal_212.4;source_transcript_name=hg002_chrY_paternal_212.1;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_212.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.4,hg002_chrY_paternal_238.4;transcript_id=HG03009_ch_T0000384;gene_id=HG03009_ch_G0000143;Parent=HG03009_ch_T0000384;transcript_name=hg002_chrY_paternal_212.1;gene_name=TSPY10;ID=exon:HG03009_ch_T0000384:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9579822	9579949	.	+	.	source_transcript=hg002_chrY_paternal_212.4;source_transcript_name=hg002_chrY_paternal_212.1;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_212.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.4,hg002_chrY_paternal_238.4;transcript_id=HG03009_ch_T0000384;gene_id=HG03009_ch_G0000143;Parent=HG03009_ch_T0000384;transcript_name=hg002_chrY_paternal_212.1;gene_name=TSPY10;ID=intron:HG03009_ch_T0000384:1;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9579950	9580061	.	+	.	source_transcript=hg002_chrY_paternal_212.4;source_transcript_name=hg002_chrY_paternal_212.1;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_212.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.4,hg002_chrY_paternal_238.4;transcript_id=HG03009_ch_T0000384;gene_id=HG03009_ch_G0000143;Parent=HG03009_ch_T0000384;transcript_name=hg002_chrY_paternal_212.1;gene_name=TSPY10;ID=exon:HG03009_ch_T0000384:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9580062	9580169	.	+	.	source_transcript=hg002_chrY_paternal_212.4;source_transcript_name=hg002_chrY_paternal_212.1;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_212.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.4,hg002_chrY_paternal_238.4;transcript_id=HG03009_ch_T0000384;gene_id=HG03009_ch_G0000143;Parent=HG03009_ch_T0000384;transcript_name=hg002_chrY_paternal_212.1;gene_name=TSPY10;ID=intron:HG03009_ch_T0000384:2;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9580170	9580308	.	+	.	source_transcript=hg002_chrY_paternal_212.4;source_transcript_name=hg002_chrY_paternal_212.1;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_212.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.4,hg002_chrY_paternal_238.4;transcript_id=HG03009_ch_T0000384;gene_id=HG03009_ch_G0000143;Parent=HG03009_ch_T0000384;transcript_name=hg002_chrY_paternal_212.1;gene_name=TSPY10;ID=exon:HG03009_ch_T0000384:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9580309	9580403	.	+	.	source_transcript=hg002_chrY_paternal_212.4;source_transcript_name=hg002_chrY_paternal_212.1;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_212.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.4,hg002_chrY_paternal_238.4;transcript_id=HG03009_ch_T0000384;gene_id=HG03009_ch_G0000143;Parent=HG03009_ch_T0000384;transcript_name=hg002_chrY_paternal_212.1;gene_name=TSPY10;ID=intron:HG03009_ch_T0000384:3;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9580404	9580496	.	+	.	source_transcript=hg002_chrY_paternal_212.4;source_transcript_name=hg002_chrY_paternal_212.1;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_212.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.4,hg002_chrY_paternal_238.4;transcript_id=HG03009_ch_T0000384;gene_id=HG03009_ch_G0000143;Parent=HG03009_ch_T0000384;transcript_name=hg002_chrY_paternal_212.1;gene_name=TSPY10;ID=exon:HG03009_ch_T0000384:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9580497	9581190	.	+	.	source_transcript=hg002_chrY_paternal_212.4;source_transcript_name=hg002_chrY_paternal_212.1;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_212.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.4,hg002_chrY_paternal_238.4;transcript_id=HG03009_ch_T0000384;gene_id=HG03009_ch_G0000143;Parent=HG03009_ch_T0000384;transcript_name=hg002_chrY_paternal_212.1;gene_name=TSPY10;ID=intron:HG03009_ch_T0000384:4;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9581191	9581401	.	+	.	source_transcript=hg002_chrY_paternal_212.4;source_transcript_name=hg002_chrY_paternal_212.1;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_212.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.4,hg002_chrY_paternal_238.4;transcript_id=HG03009_ch_T0000384;gene_id=HG03009_ch_G0000143;Parent=HG03009_ch_T0000384;transcript_name=hg002_chrY_paternal_212.1;gene_name=TSPY10;ID=exon:HG03009_ch_T0000384:5;Name=TSPY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	9590719	9596305	.	-	.	source_gene_common_name=FAM197Y3;source_gene=hg002_chrY_paternal_239;alternative_source_transcripts=hg002_chrY_paternal_239.1,hg002_chrY_paternal_239.1;gene_id=HG03009_ch_G0000144;gene_biotype=lncRNA;gene_name=FAM197Y3;gene_sources=liftoff;ID=HG03009_ch_G0000144;Name=FAM197Y3
HG03009_chrY	CAT	transcript	9590719	9596305	1000	-	.	source_transcript=hg002_chrY_paternal_239.1;source_transcript_name=hg002_chrY_paternal_239.1;source_gene=hg002_chrY_paternal_239;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_239;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_239.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_239.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_239.1,hg002_chrY_paternal_239.1;transcript_id=HG03009_ch_T0000385;gene_id=HG03009_ch_G0000144;Parent=HG03009_ch_G0000144;transcript_name=hg002_chrY_paternal_239.1;gene_name=FAM197Y3;ID=HG03009_ch_T0000385;Name=FAM197Y3
HG03009_chrY	CAT	exon	9590719	9590778	.	-	.	source_transcript=hg002_chrY_paternal_239.1;source_transcript_name=hg002_chrY_paternal_239.1;source_gene=hg002_chrY_paternal_239;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_239;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_239.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_239.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_239.1,hg002_chrY_paternal_239.1;transcript_id=HG03009_ch_T0000385;gene_id=HG03009_ch_G0000144;Parent=HG03009_ch_T0000385;transcript_name=hg002_chrY_paternal_239.1;gene_name=FAM197Y3;ID=exon:HG03009_ch_T0000385:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9590779	9594325	.	-	.	source_transcript=hg002_chrY_paternal_239.1;source_transcript_name=hg002_chrY_paternal_239.1;source_gene=hg002_chrY_paternal_239;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_239;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_239.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_239.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_239.1,hg002_chrY_paternal_239.1;transcript_id=HG03009_ch_T0000385;gene_id=HG03009_ch_G0000144;Parent=HG03009_ch_T0000385;transcript_name=hg002_chrY_paternal_239.1;gene_name=FAM197Y3;ID=intron:HG03009_ch_T0000385:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9594326	9594484	.	-	.	source_transcript=hg002_chrY_paternal_239.1;source_transcript_name=hg002_chrY_paternal_239.1;source_gene=hg002_chrY_paternal_239;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_239;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_239.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_239.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_239.1,hg002_chrY_paternal_239.1;transcript_id=HG03009_ch_T0000385;gene_id=HG03009_ch_G0000144;Parent=HG03009_ch_T0000385;transcript_name=hg002_chrY_paternal_239.1;gene_name=FAM197Y3;ID=exon:HG03009_ch_T0000385:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9594485	9595971	.	-	.	source_transcript=hg002_chrY_paternal_239.1;source_transcript_name=hg002_chrY_paternal_239.1;source_gene=hg002_chrY_paternal_239;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_239;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_239.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_239.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_239.1,hg002_chrY_paternal_239.1;transcript_id=HG03009_ch_T0000385;gene_id=HG03009_ch_G0000144;Parent=HG03009_ch_T0000385;transcript_name=hg002_chrY_paternal_239.1;gene_name=FAM197Y3;ID=intron:HG03009_ch_T0000385:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9595972	9596117	.	-	.	source_transcript=hg002_chrY_paternal_239.1;source_transcript_name=hg002_chrY_paternal_239.1;source_gene=hg002_chrY_paternal_239;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_239;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_239.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_239.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_239.1,hg002_chrY_paternal_239.1;transcript_id=HG03009_ch_T0000385;gene_id=HG03009_ch_G0000144;Parent=HG03009_ch_T0000385;transcript_name=hg002_chrY_paternal_239.1;gene_name=FAM197Y3;ID=exon:HG03009_ch_T0000385:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9596118	9596203	.	-	.	source_transcript=hg002_chrY_paternal_239.1;source_transcript_name=hg002_chrY_paternal_239.1;source_gene=hg002_chrY_paternal_239;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_239;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_239.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_239.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_239.1,hg002_chrY_paternal_239.1;transcript_id=HG03009_ch_T0000385;gene_id=HG03009_ch_G0000144;Parent=HG03009_ch_T0000385;transcript_name=hg002_chrY_paternal_239.1;gene_name=FAM197Y3;ID=intron:HG03009_ch_T0000385:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9596204	9596305	.	-	.	source_transcript=hg002_chrY_paternal_239.1;source_transcript_name=hg002_chrY_paternal_239.1;source_gene=hg002_chrY_paternal_239;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_239;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_239.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_239.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_239.1,hg002_chrY_paternal_239.1;transcript_id=HG03009_ch_T0000385;gene_id=HG03009_ch_G0000144;Parent=HG03009_ch_T0000385;transcript_name=hg002_chrY_paternal_239.1;gene_name=FAM197Y3;ID=exon:HG03009_ch_T0000385:3;Name=FAM197Y3;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	9598918	9601730	.	+	.	source_gene_common_name=TSPY9;source_gene=hg002_chrY_paternal_240;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;gene_id=HG03009_ch_G0000145;gene_biotype=protein_coding;gene_name=TSPY9;gene_sources=liftoff,augTM;ID=HG03009_ch_G0000145;Name=TSPY9
HG03009_chrY	CAT	transcript	9598918	9601730	100	+	.	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000386;gene_id=HG03009_ch_G0000145;Parent=HG03009_ch_G0000145;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=HG03009_ch_T0000386;Name=TSPY9
HG03009_chrY	CAT	exon	9598918	9599467	.	+	.	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000386;gene_id=HG03009_ch_G0000145;Parent=HG03009_ch_T0000386;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=exon:HG03009_ch_T0000386:0;Name=TSPY9;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9598964	9599467	.	+	0	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000386;gene_id=HG03009_ch_G0000145;Parent=HG03009_ch_T0000386;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=CDS:HG03009_ch_T0000386:0;Name=TSPY9;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	9598964	9598966	.	+	0	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000386;gene_id=HG03009_ch_G0000145;Parent=HG03009_ch_T0000386;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=start_codon:HG03009_ch_T0000386;Name=TSPY9;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9599468	9600074	.	+	.	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000386;gene_id=HG03009_ch_G0000145;Parent=HG03009_ch_T0000386;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=intron:HG03009_ch_T0000386:0;Name=TSPY9;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9600075	9600152	.	+	.	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000386;gene_id=HG03009_ch_G0000145;Parent=HG03009_ch_T0000386;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=exon:HG03009_ch_T0000386:1;Name=TSPY9;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9600075	9600152	.	+	0	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000386;gene_id=HG03009_ch_G0000145;Parent=HG03009_ch_T0000386;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=CDS:HG03009_ch_T0000386:1;Name=TSPY9;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9600153	9600280	.	+	.	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000386;gene_id=HG03009_ch_G0000145;Parent=HG03009_ch_T0000386;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=intron:HG03009_ch_T0000386:1;Name=TSPY9;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9600281	9600392	.	+	.	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000386;gene_id=HG03009_ch_G0000145;Parent=HG03009_ch_T0000386;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=exon:HG03009_ch_T0000386:2;Name=TSPY9;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9600281	9600392	.	+	0	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000386;gene_id=HG03009_ch_G0000145;Parent=HG03009_ch_T0000386;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=CDS:HG03009_ch_T0000386:2;Name=TSPY9;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9600393	9600493	.	+	.	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000386;gene_id=HG03009_ch_G0000145;Parent=HG03009_ch_T0000386;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=intron:HG03009_ch_T0000386:2;Name=TSPY9;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9600494	9600639	.	+	.	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000386;gene_id=HG03009_ch_G0000145;Parent=HG03009_ch_T0000386;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=exon:HG03009_ch_T0000386:3;Name=TSPY9;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9600494	9600639	.	+	2	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000386;gene_id=HG03009_ch_G0000145;Parent=HG03009_ch_T0000386;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=CDS:HG03009_ch_T0000386:3;Name=TSPY9;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9600640	9600745	.	+	.	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000386;gene_id=HG03009_ch_G0000145;Parent=HG03009_ch_T0000386;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=intron:HG03009_ch_T0000386:3;Name=TSPY9;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9600746	9600827	.	+	.	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000386;gene_id=HG03009_ch_G0000145;Parent=HG03009_ch_T0000386;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=exon:HG03009_ch_T0000386:4;Name=TSPY9;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9600746	9600827	.	+	0	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000386;gene_id=HG03009_ch_G0000145;Parent=HG03009_ch_T0000386;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=CDS:HG03009_ch_T0000386:4;Name=TSPY9;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9600828	9601519	.	+	.	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000386;gene_id=HG03009_ch_G0000145;Parent=HG03009_ch_T0000386;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=intron:HG03009_ch_T0000386:4;Name=TSPY9;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9601520	9601730	.	+	.	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000386;gene_id=HG03009_ch_G0000145;Parent=HG03009_ch_T0000386;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=exon:HG03009_ch_T0000386:5;Name=TSPY9;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9601520	9601542	.	+	2	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000386;gene_id=HG03009_ch_G0000145;Parent=HG03009_ch_T0000386;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=CDS:HG03009_ch_T0000386:5;Name=TSPY9;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	9601540	9601542	.	+	0	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000386;gene_id=HG03009_ch_G0000145;Parent=HG03009_ch_T0000386;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=stop_codon:HG03009_ch_T0000386;Name=TSPY9;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	9598918	9601730	100	+	.	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000387;gene_id=HG03009_ch_G0000145;Parent=HG03009_ch_G0000145;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=HG03009_ch_T0000387;Name=TSPY9
HG03009_chrY	CAT	exon	9598918	9599467	.	+	.	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000387;gene_id=HG03009_ch_G0000145;Parent=HG03009_ch_T0000387;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=exon:HG03009_ch_T0000387:0;Name=TSPY9;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9598964	9599467	.	+	0	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000387;gene_id=HG03009_ch_G0000145;Parent=HG03009_ch_T0000387;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=CDS:HG03009_ch_T0000387:0;Name=TSPY9;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	9598964	9598966	.	+	0	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000387;gene_id=HG03009_ch_G0000145;Parent=HG03009_ch_T0000387;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=start_codon:HG03009_ch_T0000387;Name=TSPY9;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9599468	9600074	.	+	.	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000387;gene_id=HG03009_ch_G0000145;Parent=HG03009_ch_T0000387;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=intron:HG03009_ch_T0000387:0;Name=TSPY9;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9600075	9600152	.	+	.	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000387;gene_id=HG03009_ch_G0000145;Parent=HG03009_ch_T0000387;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=exon:HG03009_ch_T0000387:1;Name=TSPY9;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9600075	9600152	.	+	0	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000387;gene_id=HG03009_ch_G0000145;Parent=HG03009_ch_T0000387;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=CDS:HG03009_ch_T0000387:1;Name=TSPY9;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9600153	9600280	.	+	.	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000387;gene_id=HG03009_ch_G0000145;Parent=HG03009_ch_T0000387;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=intron:HG03009_ch_T0000387:1;Name=TSPY9;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9600281	9600392	.	+	.	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000387;gene_id=HG03009_ch_G0000145;Parent=HG03009_ch_T0000387;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=exon:HG03009_ch_T0000387:2;Name=TSPY9;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9600281	9600392	.	+	0	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000387;gene_id=HG03009_ch_G0000145;Parent=HG03009_ch_T0000387;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=CDS:HG03009_ch_T0000387:2;Name=TSPY9;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9600393	9600493	.	+	.	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000387;gene_id=HG03009_ch_G0000145;Parent=HG03009_ch_T0000387;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=intron:HG03009_ch_T0000387:2;Name=TSPY9;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9600494	9600639	.	+	.	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000387;gene_id=HG03009_ch_G0000145;Parent=HG03009_ch_T0000387;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=exon:HG03009_ch_T0000387:3;Name=TSPY9;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9600494	9600639	.	+	2	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000387;gene_id=HG03009_ch_G0000145;Parent=HG03009_ch_T0000387;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=CDS:HG03009_ch_T0000387:3;Name=TSPY9;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9600640	9600734	.	+	.	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000387;gene_id=HG03009_ch_G0000145;Parent=HG03009_ch_T0000387;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=intron:HG03009_ch_T0000387:3;Name=TSPY9;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9600735	9600827	.	+	.	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000387;gene_id=HG03009_ch_G0000145;Parent=HG03009_ch_T0000387;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=exon:HG03009_ch_T0000387:4;Name=TSPY9;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9600735	9600797	.	+	0	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000387;gene_id=HG03009_ch_G0000145;Parent=HG03009_ch_T0000387;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=CDS:HG03009_ch_T0000387:4;Name=TSPY9;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	9600795	9600797	.	+	0	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000387;gene_id=HG03009_ch_G0000145;Parent=HG03009_ch_T0000387;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=stop_codon:HG03009_ch_T0000387;Name=TSPY9;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9600828	9601519	.	+	.	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000387;gene_id=HG03009_ch_G0000145;Parent=HG03009_ch_T0000387;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=intron:HG03009_ch_T0000387:4;Name=TSPY9;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9601520	9601730	.	+	.	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000387;gene_id=HG03009_ch_G0000145;Parent=HG03009_ch_T0000387;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=exon:HG03009_ch_T0000387:5;Name=TSPY9;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	9681777	9686209	.	-	.	source_gene_common_name=RBMY3AP;source_gene=hg002_chrY_paternal_242;alternative_source_transcripts=hg002_chrY_paternal_242.1,hg002_chrY_paternal_242.1;gene_id=HG03009_ch_G0000146;gene_biotype=transcribed_pseudogene;gene_name=RBMY3AP;gene_sources=liftoff;ID=HG03009_ch_G0000146;Name=RBMY3AP
HG03009_chrY	CAT	transcript	9681777	9686209	1000	-	.	source_transcript=hg002_chrY_paternal_242.1;source_transcript_name=hg002_chrY_paternal_242.1;source_gene=hg002_chrY_paternal_242;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_242;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_242.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_242.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;alternative_source_transcripts=hg002_chrY_paternal_242.1,hg002_chrY_paternal_242.1;transcript_id=HG03009_ch_T0000388;gene_id=HG03009_ch_G0000146;Parent=HG03009_ch_G0000146;transcript_name=hg002_chrY_paternal_242.1;gene_name=RBMY3AP;ID=HG03009_ch_T0000388;Name=RBMY3AP
HG03009_chrY	CAT	exon	9681777	9681927	.	-	.	source_transcript=hg002_chrY_paternal_242.1;source_transcript_name=hg002_chrY_paternal_242.1;source_gene=hg002_chrY_paternal_242;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_242;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_242.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;alternative_source_transcripts=hg002_chrY_paternal_242.1,hg002_chrY_paternal_242.1;transcript_id=HG03009_ch_T0000388;gene_id=HG03009_ch_G0000146;Parent=HG03009_ch_T0000388;transcript_name=hg002_chrY_paternal_242.1;gene_name=RBMY3AP;ID=exon:HG03009_ch_T0000388:0;Name=RBMY3AP;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9681928	9685837	.	-	.	source_transcript=hg002_chrY_paternal_242.1;source_transcript_name=hg002_chrY_paternal_242.1;source_gene=hg002_chrY_paternal_242;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_242;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_242.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;alternative_source_transcripts=hg002_chrY_paternal_242.1,hg002_chrY_paternal_242.1;transcript_id=HG03009_ch_T0000388;gene_id=HG03009_ch_G0000146;Parent=HG03009_ch_T0000388;transcript_name=hg002_chrY_paternal_242.1;gene_name=RBMY3AP;ID=intron:HG03009_ch_T0000388:0;Name=RBMY3AP;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9685838	9685939	.	-	.	source_transcript=hg002_chrY_paternal_242.1;source_transcript_name=hg002_chrY_paternal_242.1;source_gene=hg002_chrY_paternal_242;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_242;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_242.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;alternative_source_transcripts=hg002_chrY_paternal_242.1,hg002_chrY_paternal_242.1;transcript_id=HG03009_ch_T0000388;gene_id=HG03009_ch_G0000146;Parent=HG03009_ch_T0000388;transcript_name=hg002_chrY_paternal_242.1;gene_name=RBMY3AP;ID=exon:HG03009_ch_T0000388:1;Name=RBMY3AP;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9685940	9686145	.	-	.	source_transcript=hg002_chrY_paternal_242.1;source_transcript_name=hg002_chrY_paternal_242.1;source_gene=hg002_chrY_paternal_242;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_242;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_242.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;alternative_source_transcripts=hg002_chrY_paternal_242.1,hg002_chrY_paternal_242.1;transcript_id=HG03009_ch_T0000388;gene_id=HG03009_ch_G0000146;Parent=HG03009_ch_T0000388;transcript_name=hg002_chrY_paternal_242.1;gene_name=RBMY3AP;ID=intron:HG03009_ch_T0000388:1;Name=RBMY3AP;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9686146	9686209	.	-	.	source_transcript=hg002_chrY_paternal_242.1;source_transcript_name=hg002_chrY_paternal_242.1;source_gene=hg002_chrY_paternal_242;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_242;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_242.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;alternative_source_transcripts=hg002_chrY_paternal_242.1,hg002_chrY_paternal_242.1;transcript_id=HG03009_ch_T0000388;gene_id=HG03009_ch_G0000146;Parent=HG03009_ch_T0000388;transcript_name=hg002_chrY_paternal_242.1;gene_name=RBMY3AP;ID=exon:HG03009_ch_T0000388:2;Name=RBMY3AP;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	9762149	9764748	.	+	.	source_gene_common_name=TTTY8;source_gene=hg002_chrY_paternal_245;alternative_source_transcripts=hg002_chrY_paternal_245.1,hg002_chrY_paternal_245.1;gene_id=HG03009_ch_G0000147;gene_biotype=lncRNA;gene_name=TTTY8;gene_sources=liftoff;ID=HG03009_ch_G0000147;Name=TTTY8
HG03009_chrY	CAT	transcript	9762149	9764748	1000	+	.	source_transcript=hg002_chrY_paternal_245.1;source_transcript_name=hg002_chrY_paternal_245.1;source_gene=hg002_chrY_paternal_245;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_245;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_245.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_245.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=hg002_chrY_paternal_245.1,hg002_chrY_paternal_245.1;transcript_id=HG03009_ch_T0000389;gene_id=HG03009_ch_G0000147;Parent=HG03009_ch_G0000147;transcript_name=hg002_chrY_paternal_245.1;gene_name=TTTY8;ID=HG03009_ch_T0000389;Name=TTTY8
HG03009_chrY	CAT	exon	9762149	9762284	.	+	.	source_transcript=hg002_chrY_paternal_245.1;source_transcript_name=hg002_chrY_paternal_245.1;source_gene=hg002_chrY_paternal_245;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_245;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_245.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=hg002_chrY_paternal_245.1,hg002_chrY_paternal_245.1;transcript_id=HG03009_ch_T0000389;gene_id=HG03009_ch_G0000147;Parent=HG03009_ch_T0000389;transcript_name=hg002_chrY_paternal_245.1;gene_name=TTTY8;ID=exon:HG03009_ch_T0000389:0;Name=TTTY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9762285	9762761	.	+	.	source_transcript=hg002_chrY_paternal_245.1;source_transcript_name=hg002_chrY_paternal_245.1;source_gene=hg002_chrY_paternal_245;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_245;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_245.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=hg002_chrY_paternal_245.1,hg002_chrY_paternal_245.1;transcript_id=HG03009_ch_T0000389;gene_id=HG03009_ch_G0000147;Parent=HG03009_ch_T0000389;transcript_name=hg002_chrY_paternal_245.1;gene_name=TTTY8;ID=intron:HG03009_ch_T0000389:0;Name=TTTY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9762762	9762966	.	+	.	source_transcript=hg002_chrY_paternal_245.1;source_transcript_name=hg002_chrY_paternal_245.1;source_gene=hg002_chrY_paternal_245;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_245;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_245.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=hg002_chrY_paternal_245.1,hg002_chrY_paternal_245.1;transcript_id=HG03009_ch_T0000389;gene_id=HG03009_ch_G0000147;Parent=HG03009_ch_T0000389;transcript_name=hg002_chrY_paternal_245.1;gene_name=TTTY8;ID=exon:HG03009_ch_T0000389:1;Name=TTTY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9762967	9764558	.	+	.	source_transcript=hg002_chrY_paternal_245.1;source_transcript_name=hg002_chrY_paternal_245.1;source_gene=hg002_chrY_paternal_245;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_245;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_245.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=hg002_chrY_paternal_245.1,hg002_chrY_paternal_245.1;transcript_id=HG03009_ch_T0000389;gene_id=HG03009_ch_G0000147;Parent=HG03009_ch_T0000389;transcript_name=hg002_chrY_paternal_245.1;gene_name=TTTY8;ID=intron:HG03009_ch_T0000389:1;Name=TTTY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9764559	9764748	.	+	.	source_transcript=hg002_chrY_paternal_245.1;source_transcript_name=hg002_chrY_paternal_245.1;source_gene=hg002_chrY_paternal_245;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_245;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_245.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=hg002_chrY_paternal_245.1,hg002_chrY_paternal_245.1;transcript_id=HG03009_ch_T0000389;gene_id=HG03009_ch_G0000147;Parent=HG03009_ch_T0000389;transcript_name=hg002_chrY_paternal_245.1;gene_name=TTTY8;ID=exon:HG03009_ch_T0000389:2;Name=TTTY8;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	9777874	9786312	.	-	.	source_gene_common_name=TTTY7B;source_gene=hg002_chrY_paternal_246;alternative_source_transcripts=hg002_chrY_paternal_246.1,hg002_chrY_paternal_246.1;gene_id=HG03009_ch_G0000148;gene_biotype=lncRNA;gene_name=TTTY7B;gene_sources=liftoff;ID=HG03009_ch_G0000148;Name=TTTY7B
HG03009_chrY	CAT	transcript	9777874	9786312	1000	-	.	source_transcript=hg002_chrY_paternal_246.1;source_transcript_name=hg002_chrY_paternal_246.1;source_gene=hg002_chrY_paternal_246;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_246;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_246.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_246.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=hg002_chrY_paternal_246.1,hg002_chrY_paternal_246.1;transcript_id=HG03009_ch_T0000390;gene_id=HG03009_ch_G0000148;Parent=HG03009_ch_G0000148;transcript_name=hg002_chrY_paternal_246.1;gene_name=TTTY7B;ID=HG03009_ch_T0000390;Name=TTTY7B
HG03009_chrY	CAT	exon	9777874	9778119	.	-	.	source_transcript=hg002_chrY_paternal_246.1;source_transcript_name=hg002_chrY_paternal_246.1;source_gene=hg002_chrY_paternal_246;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_246;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_246.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=hg002_chrY_paternal_246.1,hg002_chrY_paternal_246.1;transcript_id=HG03009_ch_T0000390;gene_id=HG03009_ch_G0000148;Parent=HG03009_ch_T0000390;transcript_name=hg002_chrY_paternal_246.1;gene_name=TTTY7B;ID=exon:HG03009_ch_T0000390:0;Name=TTTY7B;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9778120	9779594	.	-	.	source_transcript=hg002_chrY_paternal_246.1;source_transcript_name=hg002_chrY_paternal_246.1;source_gene=hg002_chrY_paternal_246;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_246;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_246.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=hg002_chrY_paternal_246.1,hg002_chrY_paternal_246.1;transcript_id=HG03009_ch_T0000390;gene_id=HG03009_ch_G0000148;Parent=HG03009_ch_T0000390;transcript_name=hg002_chrY_paternal_246.1;gene_name=TTTY7B;ID=intron:HG03009_ch_T0000390:0;Name=TTTY7B;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9779595	9779708	.	-	.	source_transcript=hg002_chrY_paternal_246.1;source_transcript_name=hg002_chrY_paternal_246.1;source_gene=hg002_chrY_paternal_246;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_246;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_246.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=hg002_chrY_paternal_246.1,hg002_chrY_paternal_246.1;transcript_id=HG03009_ch_T0000390;gene_id=HG03009_ch_G0000148;Parent=HG03009_ch_T0000390;transcript_name=hg002_chrY_paternal_246.1;gene_name=TTTY7B;ID=exon:HG03009_ch_T0000390:1;Name=TTTY7B;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9779709	9781625	.	-	.	source_transcript=hg002_chrY_paternal_246.1;source_transcript_name=hg002_chrY_paternal_246.1;source_gene=hg002_chrY_paternal_246;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_246;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_246.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=hg002_chrY_paternal_246.1,hg002_chrY_paternal_246.1;transcript_id=HG03009_ch_T0000390;gene_id=HG03009_ch_G0000148;Parent=HG03009_ch_T0000390;transcript_name=hg002_chrY_paternal_246.1;gene_name=TTTY7B;ID=intron:HG03009_ch_T0000390:1;Name=TTTY7B;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9781626	9782102	.	-	.	source_transcript=hg002_chrY_paternal_246.1;source_transcript_name=hg002_chrY_paternal_246.1;source_gene=hg002_chrY_paternal_246;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_246;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_246.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=hg002_chrY_paternal_246.1,hg002_chrY_paternal_246.1;transcript_id=HG03009_ch_T0000390;gene_id=HG03009_ch_G0000148;Parent=HG03009_ch_T0000390;transcript_name=hg002_chrY_paternal_246.1;gene_name=TTTY7B;ID=exon:HG03009_ch_T0000390:2;Name=TTTY7B;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9782103	9782790	.	-	.	source_transcript=hg002_chrY_paternal_246.1;source_transcript_name=hg002_chrY_paternal_246.1;source_gene=hg002_chrY_paternal_246;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_246;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_246.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=hg002_chrY_paternal_246.1,hg002_chrY_paternal_246.1;transcript_id=HG03009_ch_T0000390;gene_id=HG03009_ch_G0000148;Parent=HG03009_ch_T0000390;transcript_name=hg002_chrY_paternal_246.1;gene_name=TTTY7B;ID=intron:HG03009_ch_T0000390:2;Name=TTTY7B;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9782791	9782865	.	-	.	source_transcript=hg002_chrY_paternal_246.1;source_transcript_name=hg002_chrY_paternal_246.1;source_gene=hg002_chrY_paternal_246;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_246;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_246.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=hg002_chrY_paternal_246.1,hg002_chrY_paternal_246.1;transcript_id=HG03009_ch_T0000390;gene_id=HG03009_ch_G0000148;Parent=HG03009_ch_T0000390;transcript_name=hg002_chrY_paternal_246.1;gene_name=TTTY7B;ID=exon:HG03009_ch_T0000390:3;Name=TTTY7B;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9782866	9785172	.	-	.	source_transcript=hg002_chrY_paternal_246.1;source_transcript_name=hg002_chrY_paternal_246.1;source_gene=hg002_chrY_paternal_246;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_246;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_246.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=hg002_chrY_paternal_246.1,hg002_chrY_paternal_246.1;transcript_id=HG03009_ch_T0000390;gene_id=HG03009_ch_G0000148;Parent=HG03009_ch_T0000390;transcript_name=hg002_chrY_paternal_246.1;gene_name=TTTY7B;ID=intron:HG03009_ch_T0000390:3;Name=TTTY7B;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9785173	9785334	.	-	.	source_transcript=hg002_chrY_paternal_246.1;source_transcript_name=hg002_chrY_paternal_246.1;source_gene=hg002_chrY_paternal_246;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_246;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_246.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=hg002_chrY_paternal_246.1,hg002_chrY_paternal_246.1;transcript_id=HG03009_ch_T0000390;gene_id=HG03009_ch_G0000148;Parent=HG03009_ch_T0000390;transcript_name=hg002_chrY_paternal_246.1;gene_name=TTTY7B;ID=exon:HG03009_ch_T0000390:4;Name=TTTY7B;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9785335	9786275	.	-	.	source_transcript=hg002_chrY_paternal_246.1;source_transcript_name=hg002_chrY_paternal_246.1;source_gene=hg002_chrY_paternal_246;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_246;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_246.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=hg002_chrY_paternal_246.1,hg002_chrY_paternal_246.1;transcript_id=HG03009_ch_T0000390;gene_id=HG03009_ch_G0000148;Parent=HG03009_ch_T0000390;transcript_name=hg002_chrY_paternal_246.1;gene_name=TTTY7B;ID=intron:HG03009_ch_T0000390:4;Name=TTTY7B;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9786276	9786312	.	-	.	source_transcript=hg002_chrY_paternal_246.1;source_transcript_name=hg002_chrY_paternal_246.1;source_gene=hg002_chrY_paternal_246;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_246;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_246.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=hg002_chrY_paternal_246.1,hg002_chrY_paternal_246.1;transcript_id=HG03009_ch_T0000390;gene_id=HG03009_ch_G0000148;Parent=HG03009_ch_T0000390;transcript_name=hg002_chrY_paternal_246.1;gene_name=TTTY7B;ID=exon:HG03009_ch_T0000390:5;Name=TTTY7B;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	9788703	9792346	.	-	.	source_gene_common_name=TTTY21;source_gene=hg002_chrY_paternal_247;alternative_source_transcripts=hg002_chrY_paternal_247.1,hg002_chrY_paternal_247.1;gene_id=HG03009_ch_G0000149;gene_biotype=lncRNA;gene_name=TTTY21;gene_sources=liftoff;ID=HG03009_ch_G0000149;Name=TTTY21
HG03009_chrY	CAT	transcript	9788703	9792346	1000	-	.	source_transcript=hg002_chrY_paternal_247.1;source_transcript_name=hg002_chrY_paternal_247.1;source_gene=hg002_chrY_paternal_247;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_247;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_247.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_247.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY21;alternative_source_transcripts=hg002_chrY_paternal_247.1,hg002_chrY_paternal_247.1;transcript_id=HG03009_ch_T0000391;gene_id=HG03009_ch_G0000149;Parent=HG03009_ch_G0000149;transcript_name=hg002_chrY_paternal_247.1;gene_name=TTTY21;ID=HG03009_ch_T0000391;Name=TTTY21
HG03009_chrY	CAT	exon	9788703	9788807	.	-	.	source_transcript=hg002_chrY_paternal_247.1;source_transcript_name=hg002_chrY_paternal_247.1;source_gene=hg002_chrY_paternal_247;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_247;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_247.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_247.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY21;alternative_source_transcripts=hg002_chrY_paternal_247.1,hg002_chrY_paternal_247.1;transcript_id=HG03009_ch_T0000391;gene_id=HG03009_ch_G0000149;Parent=HG03009_ch_T0000391;transcript_name=hg002_chrY_paternal_247.1;gene_name=TTTY21;ID=exon:HG03009_ch_T0000391:0;Name=TTTY21;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9788808	9792144	.	-	.	source_transcript=hg002_chrY_paternal_247.1;source_transcript_name=hg002_chrY_paternal_247.1;source_gene=hg002_chrY_paternal_247;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_247;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_247.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_247.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY21;alternative_source_transcripts=hg002_chrY_paternal_247.1,hg002_chrY_paternal_247.1;transcript_id=HG03009_ch_T0000391;gene_id=HG03009_ch_G0000149;Parent=HG03009_ch_T0000391;transcript_name=hg002_chrY_paternal_247.1;gene_name=TTTY21;ID=intron:HG03009_ch_T0000391:0;Name=TTTY21;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9792145	9792346	.	-	.	source_transcript=hg002_chrY_paternal_247.1;source_transcript_name=hg002_chrY_paternal_247.1;source_gene=hg002_chrY_paternal_247;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_247;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_247.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_247.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY21;alternative_source_transcripts=hg002_chrY_paternal_247.1,hg002_chrY_paternal_247.1;transcript_id=HG03009_ch_T0000391;gene_id=HG03009_ch_G0000149;Parent=HG03009_ch_T0000391;transcript_name=hg002_chrY_paternal_247.1;gene_name=TTTY21;ID=exon:HG03009_ch_T0000391:1;Name=TTTY21;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	9807338	9829539	.	+	.	source_gene_common_name=TTTY2;source_gene=hg002_chrY_paternal_248;alternative_source_transcripts=hg002_chrY_paternal_248.1,hg002_chrY_paternal_248.1;gene_id=HG03009_ch_G0000150;gene_biotype=lncRNA;gene_name=TTTY2;gene_sources=liftoff;ID=HG03009_ch_G0000150;Name=TTTY2
HG03009_chrY	CAT	transcript	9807338	9829539	1000	+	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=hg002_chrY_paternal_248.1,hg002_chrY_paternal_248.1;transcript_id=HG03009_ch_T0000392;gene_id=HG03009_ch_G0000150;Parent=HG03009_ch_G0000150;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=HG03009_ch_T0000392;Name=TTTY2
HG03009_chrY	CAT	exon	9807338	9807542	.	+	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=hg002_chrY_paternal_248.1,hg002_chrY_paternal_248.1;transcript_id=HG03009_ch_T0000392;gene_id=HG03009_ch_G0000150;Parent=HG03009_ch_T0000392;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=exon:HG03009_ch_T0000392:0;Name=TTTY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9807543	9813376	.	+	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=hg002_chrY_paternal_248.1,hg002_chrY_paternal_248.1;transcript_id=HG03009_ch_T0000392;gene_id=HG03009_ch_G0000150;Parent=HG03009_ch_T0000392;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=intron:HG03009_ch_T0000392:0;Name=TTTY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9813377	9813454	.	+	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=hg002_chrY_paternal_248.1,hg002_chrY_paternal_248.1;transcript_id=HG03009_ch_T0000392;gene_id=HG03009_ch_G0000150;Parent=HG03009_ch_T0000392;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=exon:HG03009_ch_T0000392:1;Name=TTTY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9813455	9815930	.	+	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=hg002_chrY_paternal_248.1,hg002_chrY_paternal_248.1;transcript_id=HG03009_ch_T0000392;gene_id=HG03009_ch_G0000150;Parent=HG03009_ch_T0000392;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=intron:HG03009_ch_T0000392:1;Name=TTTY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9815931	9816017	.	+	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=hg002_chrY_paternal_248.1,hg002_chrY_paternal_248.1;transcript_id=HG03009_ch_T0000392;gene_id=HG03009_ch_G0000150;Parent=HG03009_ch_T0000392;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=exon:HG03009_ch_T0000392:2;Name=TTTY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9816018	9823411	.	+	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=hg002_chrY_paternal_248.1,hg002_chrY_paternal_248.1;transcript_id=HG03009_ch_T0000392;gene_id=HG03009_ch_G0000150;Parent=HG03009_ch_T0000392;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=intron:HG03009_ch_T0000392:2;Name=TTTY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9823412	9823560	.	+	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=hg002_chrY_paternal_248.1,hg002_chrY_paternal_248.1;transcript_id=HG03009_ch_T0000392;gene_id=HG03009_ch_G0000150;Parent=HG03009_ch_T0000392;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=exon:HG03009_ch_T0000392:3;Name=TTTY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9823561	9824252	.	+	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=hg002_chrY_paternal_248.1,hg002_chrY_paternal_248.1;transcript_id=HG03009_ch_T0000392;gene_id=HG03009_ch_G0000150;Parent=HG03009_ch_T0000392;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=intron:HG03009_ch_T0000392:3;Name=TTTY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9824253	9824409	.	+	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=hg002_chrY_paternal_248.1,hg002_chrY_paternal_248.1;transcript_id=HG03009_ch_T0000392;gene_id=HG03009_ch_G0000150;Parent=HG03009_ch_T0000392;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=exon:HG03009_ch_T0000392:4;Name=TTTY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9824410	9827239	.	+	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=hg002_chrY_paternal_248.1,hg002_chrY_paternal_248.1;transcript_id=HG03009_ch_T0000392;gene_id=HG03009_ch_G0000150;Parent=HG03009_ch_T0000392;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=intron:HG03009_ch_T0000392:4;Name=TTTY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9827240	9827318	.	+	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=hg002_chrY_paternal_248.1,hg002_chrY_paternal_248.1;transcript_id=HG03009_ch_T0000392;gene_id=HG03009_ch_G0000150;Parent=HG03009_ch_T0000392;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=exon:HG03009_ch_T0000392:5;Name=TTTY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9827319	9827438	.	+	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=hg002_chrY_paternal_248.1,hg002_chrY_paternal_248.1;transcript_id=HG03009_ch_T0000392;gene_id=HG03009_ch_G0000150;Parent=HG03009_ch_T0000392;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=intron:HG03009_ch_T0000392:5;Name=TTTY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9827439	9827636	.	+	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=hg002_chrY_paternal_248.1,hg002_chrY_paternal_248.1;transcript_id=HG03009_ch_T0000392;gene_id=HG03009_ch_G0000150;Parent=HG03009_ch_T0000392;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=exon:HG03009_ch_T0000392:6;Name=TTTY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9827637	9828859	.	+	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=hg002_chrY_paternal_248.1,hg002_chrY_paternal_248.1;transcript_id=HG03009_ch_T0000392;gene_id=HG03009_ch_G0000150;Parent=HG03009_ch_T0000392;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=intron:HG03009_ch_T0000392:6;Name=TTTY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9828860	9829539	.	+	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=hg002_chrY_paternal_248.1,hg002_chrY_paternal_248.1;transcript_id=HG03009_ch_T0000392;gene_id=HG03009_ch_G0000150;Parent=HG03009_ch_T0000392;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=exon:HG03009_ch_T0000392:7;Name=TTTY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	9824219	9845382	.	-	.	source_gene_common_name=TTTY1B;source_gene=hg002_chrY_paternal_249;alternative_source_transcripts=hg002_chrY_paternal_249.1,hg002_chrY_paternal_249.1;gene_id=HG03009_ch_G0000151;gene_biotype=lncRNA;gene_name=TTTY1B;gene_sources=liftoff;ID=HG03009_ch_G0000151;Name=TTTY1B
HG03009_chrY	CAT	transcript	9824219	9845382	1000	-	.	source_transcript=hg002_chrY_paternal_249.1;source_transcript_name=hg002_chrY_paternal_249.1;source_gene=hg002_chrY_paternal_249;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_249;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_249.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_249.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=hg002_chrY_paternal_249.1,hg002_chrY_paternal_249.1;transcript_id=HG03009_ch_T0000393;gene_id=HG03009_ch_G0000151;Parent=HG03009_ch_G0000151;transcript_name=hg002_chrY_paternal_249.1;gene_name=TTTY1B;ID=HG03009_ch_T0000393;Name=TTTY1B
HG03009_chrY	CAT	exon	9824219	9824476	.	-	.	source_transcript=hg002_chrY_paternal_249.1;source_transcript_name=hg002_chrY_paternal_249.1;source_gene=hg002_chrY_paternal_249;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_249;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_249.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_249.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=hg002_chrY_paternal_249.1,hg002_chrY_paternal_249.1;transcript_id=HG03009_ch_T0000393;gene_id=HG03009_ch_G0000151;Parent=HG03009_ch_T0000393;transcript_name=hg002_chrY_paternal_249.1;gene_name=TTTY1B;ID=exon:HG03009_ch_T0000393:0;Name=TTTY1B;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9824477	9832057	.	-	.	source_transcript=hg002_chrY_paternal_249.1;source_transcript_name=hg002_chrY_paternal_249.1;source_gene=hg002_chrY_paternal_249;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_249;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_249.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_249.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=hg002_chrY_paternal_249.1,hg002_chrY_paternal_249.1;transcript_id=HG03009_ch_T0000393;gene_id=HG03009_ch_G0000151;Parent=HG03009_ch_T0000393;transcript_name=hg002_chrY_paternal_249.1;gene_name=TTTY1B;ID=intron:HG03009_ch_T0000393:0;Name=TTTY1B;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9832058	9832195	.	-	.	source_transcript=hg002_chrY_paternal_249.1;source_transcript_name=hg002_chrY_paternal_249.1;source_gene=hg002_chrY_paternal_249;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_249;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_249.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_249.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=hg002_chrY_paternal_249.1,hg002_chrY_paternal_249.1;transcript_id=HG03009_ch_T0000393;gene_id=HG03009_ch_G0000151;Parent=HG03009_ch_T0000393;transcript_name=hg002_chrY_paternal_249.1;gene_name=TTTY1B;ID=exon:HG03009_ch_T0000393:1;Name=TTTY1B;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9832196	9834551	.	-	.	source_transcript=hg002_chrY_paternal_249.1;source_transcript_name=hg002_chrY_paternal_249.1;source_gene=hg002_chrY_paternal_249;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_249;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_249.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_249.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=hg002_chrY_paternal_249.1,hg002_chrY_paternal_249.1;transcript_id=HG03009_ch_T0000393;gene_id=HG03009_ch_G0000151;Parent=HG03009_ch_T0000393;transcript_name=hg002_chrY_paternal_249.1;gene_name=TTTY1B;ID=intron:HG03009_ch_T0000393:1;Name=TTTY1B;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9834552	9834660	.	-	.	source_transcript=hg002_chrY_paternal_249.1;source_transcript_name=hg002_chrY_paternal_249.1;source_gene=hg002_chrY_paternal_249;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_249;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_249.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_249.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=hg002_chrY_paternal_249.1,hg002_chrY_paternal_249.1;transcript_id=HG03009_ch_T0000393;gene_id=HG03009_ch_G0000151;Parent=HG03009_ch_T0000393;transcript_name=hg002_chrY_paternal_249.1;gene_name=TTTY1B;ID=exon:HG03009_ch_T0000393:2;Name=TTTY1B;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9834661	9841523	.	-	.	source_transcript=hg002_chrY_paternal_249.1;source_transcript_name=hg002_chrY_paternal_249.1;source_gene=hg002_chrY_paternal_249;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_249;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_249.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_249.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=hg002_chrY_paternal_249.1,hg002_chrY_paternal_249.1;transcript_id=HG03009_ch_T0000393;gene_id=HG03009_ch_G0000151;Parent=HG03009_ch_T0000393;transcript_name=hg002_chrY_paternal_249.1;gene_name=TTTY1B;ID=intron:HG03009_ch_T0000393:2;Name=TTTY1B;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9841524	9841683	.	-	.	source_transcript=hg002_chrY_paternal_249.1;source_transcript_name=hg002_chrY_paternal_249.1;source_gene=hg002_chrY_paternal_249;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_249;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_249.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_249.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=hg002_chrY_paternal_249.1,hg002_chrY_paternal_249.1;transcript_id=HG03009_ch_T0000393;gene_id=HG03009_ch_G0000151;Parent=HG03009_ch_T0000393;transcript_name=hg002_chrY_paternal_249.1;gene_name=TTTY1B;ID=exon:HG03009_ch_T0000393:3;Name=TTTY1B;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9841684	9845107	.	-	.	source_transcript=hg002_chrY_paternal_249.1;source_transcript_name=hg002_chrY_paternal_249.1;source_gene=hg002_chrY_paternal_249;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_249;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_249.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_249.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=hg002_chrY_paternal_249.1,hg002_chrY_paternal_249.1;transcript_id=HG03009_ch_T0000393;gene_id=HG03009_ch_G0000151;Parent=HG03009_ch_T0000393;transcript_name=hg002_chrY_paternal_249.1;gene_name=TTTY1B;ID=intron:HG03009_ch_T0000393:3;Name=TTTY1B;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9845108	9845382	.	-	.	source_transcript=hg002_chrY_paternal_249.1;source_transcript_name=hg002_chrY_paternal_249.1;source_gene=hg002_chrY_paternal_249;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_249;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_249.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_249.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=hg002_chrY_paternal_249.1,hg002_chrY_paternal_249.1;transcript_id=HG03009_ch_T0000393;gene_id=HG03009_ch_G0000151;Parent=HG03009_ch_T0000393;transcript_name=hg002_chrY_paternal_249.1;gene_name=TTTY1B;ID=exon:HG03009_ch_T0000393:4;Name=TTTY1B;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	9865863	9869274	.	+	.	source_gene_common_name=LOC107987353;source_gene=hg002_chrY_paternal_250;alternative_source_transcripts=hg002_chrY_paternal_250.1,hg002_chrY_paternal_250.1;gene_id=HG03009_ch_G0000152;gene_biotype=lncRNA;gene_name=LOC107987353;gene_sources=liftoff;ID=HG03009_ch_G0000152;Name=LOC107987353
HG03009_chrY	CAT	transcript	9865863	9869274	1000	+	.	source_transcript=hg002_chrY_paternal_250.1;source_transcript_name=hg002_chrY_paternal_250.1;source_gene=hg002_chrY_paternal_250;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_250;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_250.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_250.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987353;alternative_source_transcripts=hg002_chrY_paternal_250.1,hg002_chrY_paternal_250.1;transcript_id=HG03009_ch_T0000394;gene_id=HG03009_ch_G0000152;Parent=HG03009_ch_G0000152;transcript_name=hg002_chrY_paternal_250.1;gene_name=LOC107987353;ID=HG03009_ch_T0000394;Name=LOC107987353
HG03009_chrY	CAT	exon	9865863	9866031	.	+	.	source_transcript=hg002_chrY_paternal_250.1;source_transcript_name=hg002_chrY_paternal_250.1;source_gene=hg002_chrY_paternal_250;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_250;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_250.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_250.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987353;alternative_source_transcripts=hg002_chrY_paternal_250.1,hg002_chrY_paternal_250.1;transcript_id=HG03009_ch_T0000394;gene_id=HG03009_ch_G0000152;Parent=HG03009_ch_T0000394;transcript_name=hg002_chrY_paternal_250.1;gene_name=LOC107987353;ID=exon:HG03009_ch_T0000394:0;Name=LOC107987353;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9866032	9866407	.	+	.	source_transcript=hg002_chrY_paternal_250.1;source_transcript_name=hg002_chrY_paternal_250.1;source_gene=hg002_chrY_paternal_250;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_250;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_250.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_250.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987353;alternative_source_transcripts=hg002_chrY_paternal_250.1,hg002_chrY_paternal_250.1;transcript_id=HG03009_ch_T0000394;gene_id=HG03009_ch_G0000152;Parent=HG03009_ch_T0000394;transcript_name=hg002_chrY_paternal_250.1;gene_name=LOC107987353;ID=intron:HG03009_ch_T0000394:0;Name=LOC107987353;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9866408	9866480	.	+	.	source_transcript=hg002_chrY_paternal_250.1;source_transcript_name=hg002_chrY_paternal_250.1;source_gene=hg002_chrY_paternal_250;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_250;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_250.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_250.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987353;alternative_source_transcripts=hg002_chrY_paternal_250.1,hg002_chrY_paternal_250.1;transcript_id=HG03009_ch_T0000394;gene_id=HG03009_ch_G0000152;Parent=HG03009_ch_T0000394;transcript_name=hg002_chrY_paternal_250.1;gene_name=LOC107987353;ID=exon:HG03009_ch_T0000394:1;Name=LOC107987353;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9866481	9869011	.	+	.	source_transcript=hg002_chrY_paternal_250.1;source_transcript_name=hg002_chrY_paternal_250.1;source_gene=hg002_chrY_paternal_250;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_250;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_250.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_250.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987353;alternative_source_transcripts=hg002_chrY_paternal_250.1,hg002_chrY_paternal_250.1;transcript_id=HG03009_ch_T0000394;gene_id=HG03009_ch_G0000152;Parent=HG03009_ch_T0000394;transcript_name=hg002_chrY_paternal_250.1;gene_name=LOC107987353;ID=intron:HG03009_ch_T0000394:1;Name=LOC107987353;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9869012	9869274	.	+	.	source_transcript=hg002_chrY_paternal_250.1;source_transcript_name=hg002_chrY_paternal_250.1;source_gene=hg002_chrY_paternal_250;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_250;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_250.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_250.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987353;alternative_source_transcripts=hg002_chrY_paternal_250.1,hg002_chrY_paternal_250.1;transcript_id=HG03009_ch_T0000394;gene_id=HG03009_ch_G0000152;Parent=HG03009_ch_T0000394;transcript_name=hg002_chrY_paternal_250.1;gene_name=LOC107987353;ID=exon:HG03009_ch_T0000394:2;Name=LOC107987353;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	9874372	9878590	.	+	.	source_gene_common_name=LINC00280;source_gene=hg002_chrY_paternal_251;alternative_source_transcripts=hg002_chrY_paternal_251.1,hg002_chrY_paternal_251.1;gene_id=HG03009_ch_G0000153;gene_biotype=lncRNA;gene_name=LINC00280;gene_sources=liftoff;ID=HG03009_ch_G0000153;Name=LINC00280
HG03009_chrY	CAT	transcript	9874372	9878590	1000	+	.	source_transcript=hg002_chrY_paternal_251.1;source_transcript_name=hg002_chrY_paternal_251.1;source_gene=hg002_chrY_paternal_251;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_251;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_251.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_251.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=hg002_chrY_paternal_251.1,hg002_chrY_paternal_251.1;transcript_id=HG03009_ch_T0000395;gene_id=HG03009_ch_G0000153;Parent=HG03009_ch_G0000153;transcript_name=hg002_chrY_paternal_251.1;gene_name=LINC00280;ID=HG03009_ch_T0000395;Name=LINC00280
HG03009_chrY	CAT	exon	9874372	9874457	.	+	.	source_transcript=hg002_chrY_paternal_251.1;source_transcript_name=hg002_chrY_paternal_251.1;source_gene=hg002_chrY_paternal_251;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_251;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_251.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_251.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=hg002_chrY_paternal_251.1,hg002_chrY_paternal_251.1;transcript_id=HG03009_ch_T0000395;gene_id=HG03009_ch_G0000153;Parent=HG03009_ch_T0000395;transcript_name=hg002_chrY_paternal_251.1;gene_name=LINC00280;ID=exon:HG03009_ch_T0000395:0;Name=LINC00280;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9874458	9876958	.	+	.	source_transcript=hg002_chrY_paternal_251.1;source_transcript_name=hg002_chrY_paternal_251.1;source_gene=hg002_chrY_paternal_251;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_251;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_251.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_251.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=hg002_chrY_paternal_251.1,hg002_chrY_paternal_251.1;transcript_id=HG03009_ch_T0000395;gene_id=HG03009_ch_G0000153;Parent=HG03009_ch_T0000395;transcript_name=hg002_chrY_paternal_251.1;gene_name=LINC00280;ID=intron:HG03009_ch_T0000395:0;Name=LINC00280;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9876959	9877101	.	+	.	source_transcript=hg002_chrY_paternal_251.1;source_transcript_name=hg002_chrY_paternal_251.1;source_gene=hg002_chrY_paternal_251;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_251;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_251.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_251.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=hg002_chrY_paternal_251.1,hg002_chrY_paternal_251.1;transcript_id=HG03009_ch_T0000395;gene_id=HG03009_ch_G0000153;Parent=HG03009_ch_T0000395;transcript_name=hg002_chrY_paternal_251.1;gene_name=LINC00280;ID=exon:HG03009_ch_T0000395:1;Name=LINC00280;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9877102	9878371	.	+	.	source_transcript=hg002_chrY_paternal_251.1;source_transcript_name=hg002_chrY_paternal_251.1;source_gene=hg002_chrY_paternal_251;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_251;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_251.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_251.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=hg002_chrY_paternal_251.1,hg002_chrY_paternal_251.1;transcript_id=HG03009_ch_T0000395;gene_id=HG03009_ch_G0000153;Parent=HG03009_ch_T0000395;transcript_name=hg002_chrY_paternal_251.1;gene_name=LINC00280;ID=intron:HG03009_ch_T0000395:1;Name=LINC00280;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9878372	9878590	.	+	.	source_transcript=hg002_chrY_paternal_251.1;source_transcript_name=hg002_chrY_paternal_251.1;source_gene=hg002_chrY_paternal_251;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_251;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_251.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_251.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=hg002_chrY_paternal_251.1,hg002_chrY_paternal_251.1;transcript_id=HG03009_ch_T0000395;gene_id=HG03009_ch_G0000153;Parent=HG03009_ch_T0000395;transcript_name=hg002_chrY_paternal_251.1;gene_name=LINC00280;ID=exon:HG03009_ch_T0000395:2;Name=LINC00280;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	9971911	9977514	.	+	.	source_gene_common_name=FAM197Y9;source_gene=hg002_chrY_paternal_255;alternative_source_transcripts=hg002_chrY_paternal_255.1,hg002_chrY_paternal_255.1;gene_id=HG03009_ch_G0000154;gene_biotype=lncRNA;gene_name=FAM197Y9;gene_sources=liftoff;ID=HG03009_ch_G0000154;Name=FAM197Y9
HG03009_chrY	CAT	transcript	9971911	9977514	1000	+	.	source_transcript=hg002_chrY_paternal_255.1;source_transcript_name=hg002_chrY_paternal_255.1;source_gene=hg002_chrY_paternal_255;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_255;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_255.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_255.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;alternative_source_transcripts=hg002_chrY_paternal_255.1,hg002_chrY_paternal_255.1;transcript_id=HG03009_ch_T0000396;gene_id=HG03009_ch_G0000154;Parent=HG03009_ch_G0000154;transcript_name=hg002_chrY_paternal_255.1;gene_name=FAM197Y9;ID=HG03009_ch_T0000396;Name=FAM197Y9
HG03009_chrY	CAT	exon	9971911	9972012	.	+	.	source_transcript=hg002_chrY_paternal_255.1;source_transcript_name=hg002_chrY_paternal_255.1;source_gene=hg002_chrY_paternal_255;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_255;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_255.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_255.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;alternative_source_transcripts=hg002_chrY_paternal_255.1,hg002_chrY_paternal_255.1;transcript_id=HG03009_ch_T0000396;gene_id=HG03009_ch_G0000154;Parent=HG03009_ch_T0000396;transcript_name=hg002_chrY_paternal_255.1;gene_name=FAM197Y9;ID=exon:HG03009_ch_T0000396:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9972013	9972098	.	+	.	source_transcript=hg002_chrY_paternal_255.1;source_transcript_name=hg002_chrY_paternal_255.1;source_gene=hg002_chrY_paternal_255;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_255;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_255.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_255.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;alternative_source_transcripts=hg002_chrY_paternal_255.1,hg002_chrY_paternal_255.1;transcript_id=HG03009_ch_T0000396;gene_id=HG03009_ch_G0000154;Parent=HG03009_ch_T0000396;transcript_name=hg002_chrY_paternal_255.1;gene_name=FAM197Y9;ID=intron:HG03009_ch_T0000396:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9972099	9972244	.	+	.	source_transcript=hg002_chrY_paternal_255.1;source_transcript_name=hg002_chrY_paternal_255.1;source_gene=hg002_chrY_paternal_255;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_255;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_255.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_255.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;alternative_source_transcripts=hg002_chrY_paternal_255.1,hg002_chrY_paternal_255.1;transcript_id=HG03009_ch_T0000396;gene_id=HG03009_ch_G0000154;Parent=HG03009_ch_T0000396;transcript_name=hg002_chrY_paternal_255.1;gene_name=FAM197Y9;ID=exon:HG03009_ch_T0000396:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9972245	9973744	.	+	.	source_transcript=hg002_chrY_paternal_255.1;source_transcript_name=hg002_chrY_paternal_255.1;source_gene=hg002_chrY_paternal_255;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_255;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_255.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_255.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;alternative_source_transcripts=hg002_chrY_paternal_255.1,hg002_chrY_paternal_255.1;transcript_id=HG03009_ch_T0000396;gene_id=HG03009_ch_G0000154;Parent=HG03009_ch_T0000396;transcript_name=hg002_chrY_paternal_255.1;gene_name=FAM197Y9;ID=intron:HG03009_ch_T0000396:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9973745	9973903	.	+	.	source_transcript=hg002_chrY_paternal_255.1;source_transcript_name=hg002_chrY_paternal_255.1;source_gene=hg002_chrY_paternal_255;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_255;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_255.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_255.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;alternative_source_transcripts=hg002_chrY_paternal_255.1,hg002_chrY_paternal_255.1;transcript_id=HG03009_ch_T0000396;gene_id=HG03009_ch_G0000154;Parent=HG03009_ch_T0000396;transcript_name=hg002_chrY_paternal_255.1;gene_name=FAM197Y9;ID=exon:HG03009_ch_T0000396:2;Name=FAM197Y9;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9973904	9977454	.	+	.	source_transcript=hg002_chrY_paternal_255.1;source_transcript_name=hg002_chrY_paternal_255.1;source_gene=hg002_chrY_paternal_255;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_255;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_255.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_255.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;alternative_source_transcripts=hg002_chrY_paternal_255.1,hg002_chrY_paternal_255.1;transcript_id=HG03009_ch_T0000396;gene_id=HG03009_ch_G0000154;Parent=HG03009_ch_T0000396;transcript_name=hg002_chrY_paternal_255.1;gene_name=FAM197Y9;ID=intron:HG03009_ch_T0000396:2;Name=FAM197Y9;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9977455	9977514	.	+	.	source_transcript=hg002_chrY_paternal_255.1;source_transcript_name=hg002_chrY_paternal_255.1;source_gene=hg002_chrY_paternal_255;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_255;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_255.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_255.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;alternative_source_transcripts=hg002_chrY_paternal_255.1,hg002_chrY_paternal_255.1;transcript_id=HG03009_ch_T0000396;gene_id=HG03009_ch_G0000154;Parent=HG03009_ch_T0000396;transcript_name=hg002_chrY_paternal_255.1;gene_name=FAM197Y9;ID=exon:HG03009_ch_T0000396:3;Name=FAM197Y9;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	9986829	9989624	.	-	.	source_gene_common_name=TSPY2;source_gene=hg002_chrY_paternal_256;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.1;gene_id=HG03009_ch_G0000155;gene_biotype=protein_coding;gene_name=TSPY2;gene_sources=liftoff,augTM;ID=HG03009_ch_G0000155;Name=TSPY2
HG03009_chrY	CAT	transcript	9986829	9989624	100	-	.	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000397;gene_id=HG03009_ch_G0000155;Parent=HG03009_ch_G0000155;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=HG03009_ch_T0000397;Name=TSPY2
HG03009_chrY	CAT	exon	9986829	9987044	.	-	.	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000397;gene_id=HG03009_ch_G0000155;Parent=HG03009_ch_T0000397;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG03009_ch_T0000397:0;Name=TSPY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9987022	9987044	.	-	2	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000397;gene_id=HG03009_ch_G0000155;Parent=HG03009_ch_T0000397;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:HG03009_ch_T0000397:0;Name=TSPY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	9987022	9987024	.	-	0	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000397;gene_id=HG03009_ch_G0000155;Parent=HG03009_ch_T0000397;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=stop_codon:HG03009_ch_T0000397;Name=TSPY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9987045	9987738	.	-	.	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000397;gene_id=HG03009_ch_G0000155;Parent=HG03009_ch_T0000397;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:HG03009_ch_T0000397:0;Name=TSPY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9987739	9987820	.	-	.	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000397;gene_id=HG03009_ch_G0000155;Parent=HG03009_ch_T0000397;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG03009_ch_T0000397:1;Name=TSPY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9987739	9987820	.	-	0	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000397;gene_id=HG03009_ch_G0000155;Parent=HG03009_ch_T0000397;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:HG03009_ch_T0000397:1;Name=TSPY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9987821	9987926	.	-	.	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000397;gene_id=HG03009_ch_G0000155;Parent=HG03009_ch_T0000397;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:HG03009_ch_T0000397:1;Name=TSPY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9987927	9988072	.	-	.	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000397;gene_id=HG03009_ch_G0000155;Parent=HG03009_ch_T0000397;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG03009_ch_T0000397:2;Name=TSPY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9987927	9988072	.	-	2	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000397;gene_id=HG03009_ch_G0000155;Parent=HG03009_ch_T0000397;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:HG03009_ch_T0000397:2;Name=TSPY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9988073	9988173	.	-	.	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000397;gene_id=HG03009_ch_G0000155;Parent=HG03009_ch_T0000397;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:HG03009_ch_T0000397:2;Name=TSPY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9988174	9988285	.	-	.	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000397;gene_id=HG03009_ch_G0000155;Parent=HG03009_ch_T0000397;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG03009_ch_T0000397:3;Name=TSPY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9988174	9988285	.	-	0	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000397;gene_id=HG03009_ch_G0000155;Parent=HG03009_ch_T0000397;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:HG03009_ch_T0000397:3;Name=TSPY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9988286	9988413	.	-	.	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000397;gene_id=HG03009_ch_G0000155;Parent=HG03009_ch_T0000397;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:HG03009_ch_T0000397:3;Name=TSPY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9988414	9988491	.	-	.	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000397;gene_id=HG03009_ch_G0000155;Parent=HG03009_ch_T0000397;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG03009_ch_T0000397:4;Name=TSPY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9988414	9988491	.	-	0	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000397;gene_id=HG03009_ch_G0000155;Parent=HG03009_ch_T0000397;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:HG03009_ch_T0000397:4;Name=TSPY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9988492	9989092	.	-	.	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000397;gene_id=HG03009_ch_G0000155;Parent=HG03009_ch_T0000397;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:HG03009_ch_T0000397:4;Name=TSPY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9989093	9989624	.	-	.	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000397;gene_id=HG03009_ch_G0000155;Parent=HG03009_ch_T0000397;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG03009_ch_T0000397:5;Name=TSPY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9989093	9989578	.	-	0	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000397;gene_id=HG03009_ch_G0000155;Parent=HG03009_ch_T0000397;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:HG03009_ch_T0000397:5;Name=TSPY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	9989576	9989578	.	-	0	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000397;gene_id=HG03009_ch_G0000155;Parent=HG03009_ch_T0000397;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=start_codon:HG03009_ch_T0000397;Name=TSPY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	9986829	9989624	100	-	.	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.2,hg002_chrY_paternal_256.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000398;gene_id=HG03009_ch_G0000155;Parent=HG03009_ch_G0000155;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=HG03009_ch_T0000398;Name=TSPY2
HG03009_chrY	CAT	exon	9986829	9987044	.	-	.	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.2,hg002_chrY_paternal_256.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000398;gene_id=HG03009_ch_G0000155;Parent=HG03009_ch_T0000398;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG03009_ch_T0000398:0;Name=TSPY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9987045	9987738	.	-	.	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.2,hg002_chrY_paternal_256.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000398;gene_id=HG03009_ch_G0000155;Parent=HG03009_ch_T0000398;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:HG03009_ch_T0000398:0;Name=TSPY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9987739	9987831	.	-	.	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.2,hg002_chrY_paternal_256.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000398;gene_id=HG03009_ch_G0000155;Parent=HG03009_ch_T0000398;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG03009_ch_T0000398:1;Name=TSPY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9987769	9987831	.	-	0	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.2,hg002_chrY_paternal_256.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000398;gene_id=HG03009_ch_G0000155;Parent=HG03009_ch_T0000398;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:HG03009_ch_T0000398:0;Name=TSPY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	9987769	9987771	.	-	0	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.2,hg002_chrY_paternal_256.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000398;gene_id=HG03009_ch_G0000155;Parent=HG03009_ch_T0000398;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=stop_codon:HG03009_ch_T0000398;Name=TSPY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9987832	9987926	.	-	.	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.2,hg002_chrY_paternal_256.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000398;gene_id=HG03009_ch_G0000155;Parent=HG03009_ch_T0000398;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:HG03009_ch_T0000398:1;Name=TSPY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9987927	9988072	.	-	.	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.2,hg002_chrY_paternal_256.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000398;gene_id=HG03009_ch_G0000155;Parent=HG03009_ch_T0000398;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG03009_ch_T0000398:2;Name=TSPY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9987927	9988072	.	-	2	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.2,hg002_chrY_paternal_256.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000398;gene_id=HG03009_ch_G0000155;Parent=HG03009_ch_T0000398;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:HG03009_ch_T0000398:1;Name=TSPY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9988073	9988173	.	-	.	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.2,hg002_chrY_paternal_256.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000398;gene_id=HG03009_ch_G0000155;Parent=HG03009_ch_T0000398;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:HG03009_ch_T0000398:2;Name=TSPY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9988174	9988285	.	-	.	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.2,hg002_chrY_paternal_256.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000398;gene_id=HG03009_ch_G0000155;Parent=HG03009_ch_T0000398;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG03009_ch_T0000398:3;Name=TSPY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9988174	9988285	.	-	0	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.2,hg002_chrY_paternal_256.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000398;gene_id=HG03009_ch_G0000155;Parent=HG03009_ch_T0000398;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:HG03009_ch_T0000398:2;Name=TSPY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9988286	9988413	.	-	.	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.2,hg002_chrY_paternal_256.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000398;gene_id=HG03009_ch_G0000155;Parent=HG03009_ch_T0000398;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:HG03009_ch_T0000398:3;Name=TSPY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9988414	9988491	.	-	.	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.2,hg002_chrY_paternal_256.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000398;gene_id=HG03009_ch_G0000155;Parent=HG03009_ch_T0000398;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG03009_ch_T0000398:4;Name=TSPY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9988414	9988491	.	-	0	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.2,hg002_chrY_paternal_256.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000398;gene_id=HG03009_ch_G0000155;Parent=HG03009_ch_T0000398;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:HG03009_ch_T0000398:3;Name=TSPY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9988492	9989092	.	-	.	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.2,hg002_chrY_paternal_256.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000398;gene_id=HG03009_ch_G0000155;Parent=HG03009_ch_T0000398;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:HG03009_ch_T0000398:4;Name=TSPY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9989093	9989624	.	-	.	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.2,hg002_chrY_paternal_256.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000398;gene_id=HG03009_ch_G0000155;Parent=HG03009_ch_T0000398;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG03009_ch_T0000398:5;Name=TSPY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9989093	9989578	.	-	0	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.2,hg002_chrY_paternal_256.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000398;gene_id=HG03009_ch_G0000155;Parent=HG03009_ch_T0000398;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:HG03009_ch_T0000398:4;Name=TSPY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	9989576	9989578	.	-	0	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.2,hg002_chrY_paternal_256.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000398;gene_id=HG03009_ch_G0000155;Parent=HG03009_ch_T0000398;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=start_codon:HG03009_ch_T0000398;Name=TSPY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	9986829	9989624	100	-	.	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.3,hg002_chrY_paternal_256.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000399;gene_id=HG03009_ch_G0000155;Parent=HG03009_ch_G0000155;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=HG03009_ch_T0000399;Name=TSPY2
HG03009_chrY	CAT	exon	9986829	9987044	.	-	.	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.3,hg002_chrY_paternal_256.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000399;gene_id=HG03009_ch_G0000155;Parent=HG03009_ch_T0000399;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG03009_ch_T0000399:0;Name=TSPY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9987045	9987738	.	-	.	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.3,hg002_chrY_paternal_256.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000399;gene_id=HG03009_ch_G0000155;Parent=HG03009_ch_T0000399;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:HG03009_ch_T0000399:0;Name=TSPY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9987739	9987820	.	-	.	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.3,hg002_chrY_paternal_256.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000399;gene_id=HG03009_ch_G0000155;Parent=HG03009_ch_T0000399;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG03009_ch_T0000399:1;Name=TSPY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9987769	9987820	.	-	1	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.3,hg002_chrY_paternal_256.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000399;gene_id=HG03009_ch_G0000155;Parent=HG03009_ch_T0000399;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:HG03009_ch_T0000399:0;Name=TSPY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	9987769	9987771	.	-	0	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.3,hg002_chrY_paternal_256.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000399;gene_id=HG03009_ch_G0000155;Parent=HG03009_ch_T0000399;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=stop_codon:HG03009_ch_T0000399;Name=TSPY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9987821	9987926	.	-	.	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.3,hg002_chrY_paternal_256.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000399;gene_id=HG03009_ch_G0000155;Parent=HG03009_ch_T0000399;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:HG03009_ch_T0000399:1;Name=TSPY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9987927	9988065	.	-	.	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.3,hg002_chrY_paternal_256.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000399;gene_id=HG03009_ch_G0000155;Parent=HG03009_ch_T0000399;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG03009_ch_T0000399:2;Name=TSPY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9987927	9988065	.	-	2	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.3,hg002_chrY_paternal_256.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000399;gene_id=HG03009_ch_G0000155;Parent=HG03009_ch_T0000399;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:HG03009_ch_T0000399:1;Name=TSPY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9988066	9988173	.	-	.	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.3,hg002_chrY_paternal_256.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000399;gene_id=HG03009_ch_G0000155;Parent=HG03009_ch_T0000399;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:HG03009_ch_T0000399:2;Name=TSPY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9988174	9988285	.	-	.	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.3,hg002_chrY_paternal_256.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000399;gene_id=HG03009_ch_G0000155;Parent=HG03009_ch_T0000399;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG03009_ch_T0000399:3;Name=TSPY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9988174	9988285	.	-	0	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.3,hg002_chrY_paternal_256.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000399;gene_id=HG03009_ch_G0000155;Parent=HG03009_ch_T0000399;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:HG03009_ch_T0000399:2;Name=TSPY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9988286	9988413	.	-	.	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.3,hg002_chrY_paternal_256.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000399;gene_id=HG03009_ch_G0000155;Parent=HG03009_ch_T0000399;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:HG03009_ch_T0000399:3;Name=TSPY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9988414	9988491	.	-	.	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.3,hg002_chrY_paternal_256.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000399;gene_id=HG03009_ch_G0000155;Parent=HG03009_ch_T0000399;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG03009_ch_T0000399:4;Name=TSPY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9988414	9988491	.	-	0	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.3,hg002_chrY_paternal_256.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000399;gene_id=HG03009_ch_G0000155;Parent=HG03009_ch_T0000399;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:HG03009_ch_T0000399:3;Name=TSPY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9988492	9989092	.	-	.	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.3,hg002_chrY_paternal_256.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000399;gene_id=HG03009_ch_G0000155;Parent=HG03009_ch_T0000399;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:HG03009_ch_T0000399:4;Name=TSPY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9989093	9989624	.	-	.	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.3,hg002_chrY_paternal_256.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000399;gene_id=HG03009_ch_G0000155;Parent=HG03009_ch_T0000399;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG03009_ch_T0000399:5;Name=TSPY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	9989093	9989578	.	-	0	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.3,hg002_chrY_paternal_256.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000399;gene_id=HG03009_ch_G0000155;Parent=HG03009_ch_T0000399;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:HG03009_ch_T0000399:4;Name=TSPY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	9989576	9989578	.	-	0	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.3,hg002_chrY_paternal_256.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000399;gene_id=HG03009_ch_G0000155;Parent=HG03009_ch_T0000399;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=start_codon:HG03009_ch_T0000399;Name=TSPY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	9986829	9989624	1000	-	.	source_transcript=hg002_chrY_paternal_256.4;source_transcript_name=hg002_chrY_paternal_256.1;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_256.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.4,hg002_chrY_paternal_256.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000400;gene_id=HG03009_ch_G0000155;Parent=HG03009_ch_G0000155;transcript_name=hg002_chrY_paternal_256.1;gene_name=TSPY2;ID=HG03009_ch_T0000400;Name=TSPY2
HG03009_chrY	CAT	exon	9986829	9987044	.	-	.	source_transcript=hg002_chrY_paternal_256.4;source_transcript_name=hg002_chrY_paternal_256.1;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_256.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.4,hg002_chrY_paternal_256.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000400;gene_id=HG03009_ch_G0000155;Parent=HG03009_ch_T0000400;transcript_name=hg002_chrY_paternal_256.1;gene_name=TSPY2;ID=exon:HG03009_ch_T0000400:0;Name=TSPY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9987045	9987738	.	-	.	source_transcript=hg002_chrY_paternal_256.4;source_transcript_name=hg002_chrY_paternal_256.1;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_256.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.4,hg002_chrY_paternal_256.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000400;gene_id=HG03009_ch_G0000155;Parent=HG03009_ch_T0000400;transcript_name=hg002_chrY_paternal_256.1;gene_name=TSPY2;ID=intron:HG03009_ch_T0000400:0;Name=TSPY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9987739	9987831	.	-	.	source_transcript=hg002_chrY_paternal_256.4;source_transcript_name=hg002_chrY_paternal_256.1;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_256.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.4,hg002_chrY_paternal_256.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000400;gene_id=HG03009_ch_G0000155;Parent=HG03009_ch_T0000400;transcript_name=hg002_chrY_paternal_256.1;gene_name=TSPY2;ID=exon:HG03009_ch_T0000400:1;Name=TSPY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9987832	9987926	.	-	.	source_transcript=hg002_chrY_paternal_256.4;source_transcript_name=hg002_chrY_paternal_256.1;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_256.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.4,hg002_chrY_paternal_256.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000400;gene_id=HG03009_ch_G0000155;Parent=HG03009_ch_T0000400;transcript_name=hg002_chrY_paternal_256.1;gene_name=TSPY2;ID=intron:HG03009_ch_T0000400:1;Name=TSPY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9987927	9988065	.	-	.	source_transcript=hg002_chrY_paternal_256.4;source_transcript_name=hg002_chrY_paternal_256.1;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_256.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.4,hg002_chrY_paternal_256.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000400;gene_id=HG03009_ch_G0000155;Parent=HG03009_ch_T0000400;transcript_name=hg002_chrY_paternal_256.1;gene_name=TSPY2;ID=exon:HG03009_ch_T0000400:2;Name=TSPY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9988066	9988173	.	-	.	source_transcript=hg002_chrY_paternal_256.4;source_transcript_name=hg002_chrY_paternal_256.1;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_256.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.4,hg002_chrY_paternal_256.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000400;gene_id=HG03009_ch_G0000155;Parent=HG03009_ch_T0000400;transcript_name=hg002_chrY_paternal_256.1;gene_name=TSPY2;ID=intron:HG03009_ch_T0000400:2;Name=TSPY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9988174	9988285	.	-	.	source_transcript=hg002_chrY_paternal_256.4;source_transcript_name=hg002_chrY_paternal_256.1;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_256.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.4,hg002_chrY_paternal_256.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000400;gene_id=HG03009_ch_G0000155;Parent=HG03009_ch_T0000400;transcript_name=hg002_chrY_paternal_256.1;gene_name=TSPY2;ID=exon:HG03009_ch_T0000400:3;Name=TSPY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9988286	9988413	.	-	.	source_transcript=hg002_chrY_paternal_256.4;source_transcript_name=hg002_chrY_paternal_256.1;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_256.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.4,hg002_chrY_paternal_256.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000400;gene_id=HG03009_ch_G0000155;Parent=HG03009_ch_T0000400;transcript_name=hg002_chrY_paternal_256.1;gene_name=TSPY2;ID=intron:HG03009_ch_T0000400:3;Name=TSPY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9988414	9988491	.	-	.	source_transcript=hg002_chrY_paternal_256.4;source_transcript_name=hg002_chrY_paternal_256.1;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_256.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.4,hg002_chrY_paternal_256.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000400;gene_id=HG03009_ch_G0000155;Parent=HG03009_ch_T0000400;transcript_name=hg002_chrY_paternal_256.1;gene_name=TSPY2;ID=exon:HG03009_ch_T0000400:4;Name=TSPY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9988492	9989092	.	-	.	source_transcript=hg002_chrY_paternal_256.4;source_transcript_name=hg002_chrY_paternal_256.1;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_256.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.4,hg002_chrY_paternal_256.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000400;gene_id=HG03009_ch_G0000155;Parent=HG03009_ch_T0000400;transcript_name=hg002_chrY_paternal_256.1;gene_name=TSPY2;ID=intron:HG03009_ch_T0000400:4;Name=TSPY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9989093	9989624	.	-	.	source_transcript=hg002_chrY_paternal_256.4;source_transcript_name=hg002_chrY_paternal_256.1;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_256.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.4,hg002_chrY_paternal_256.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000400;gene_id=HG03009_ch_G0000155;Parent=HG03009_ch_T0000400;transcript_name=hg002_chrY_paternal_256.1;gene_name=TSPY2;ID=exon:HG03009_ch_T0000400:5;Name=TSPY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	9992237	9993401	.	+	.	source_gene_common_name=TTTY23B;source_gene=hg002_chrY_paternal_257;alternative_source_transcripts=hg002_chrY_paternal_257.1,hg002_chrY_paternal_257.1;gene_id=HG03009_ch_G0000156;gene_biotype=lncRNA;gene_name=TTTY23B;gene_sources=liftoff;ID=HG03009_ch_G0000156;Name=TTTY23B
HG03009_chrY	CAT	transcript	9992237	9993401	1000	+	.	source_transcript=hg002_chrY_paternal_257.1;source_transcript_name=hg002_chrY_paternal_257.1;source_gene=hg002_chrY_paternal_257;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_257;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_257.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_257.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23B;alternative_source_transcripts=hg002_chrY_paternal_257.1,hg002_chrY_paternal_257.1;transcript_id=HG03009_ch_T0000401;gene_id=HG03009_ch_G0000156;Parent=HG03009_ch_G0000156;transcript_name=hg002_chrY_paternal_257.1;gene_name=TTTY23B;ID=HG03009_ch_T0000401;Name=TTTY23B
HG03009_chrY	CAT	exon	9992237	9992293	.	+	.	source_transcript=hg002_chrY_paternal_257.1;source_transcript_name=hg002_chrY_paternal_257.1;source_gene=hg002_chrY_paternal_257;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_257;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_257.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_257.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23B;alternative_source_transcripts=hg002_chrY_paternal_257.1,hg002_chrY_paternal_257.1;transcript_id=HG03009_ch_T0000401;gene_id=HG03009_ch_G0000156;Parent=HG03009_ch_T0000401;transcript_name=hg002_chrY_paternal_257.1;gene_name=TTTY23B;ID=exon:HG03009_ch_T0000401:0;Name=TTTY23B;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9992294	9992406	.	+	.	source_transcript=hg002_chrY_paternal_257.1;source_transcript_name=hg002_chrY_paternal_257.1;source_gene=hg002_chrY_paternal_257;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_257;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_257.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_257.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23B;alternative_source_transcripts=hg002_chrY_paternal_257.1,hg002_chrY_paternal_257.1;transcript_id=HG03009_ch_T0000401;gene_id=HG03009_ch_G0000156;Parent=HG03009_ch_T0000401;transcript_name=hg002_chrY_paternal_257.1;gene_name=TTTY23B;ID=intron:HG03009_ch_T0000401:0;Name=TTTY23B;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9992407	9992552	.	+	.	source_transcript=hg002_chrY_paternal_257.1;source_transcript_name=hg002_chrY_paternal_257.1;source_gene=hg002_chrY_paternal_257;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_257;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_257.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_257.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23B;alternative_source_transcripts=hg002_chrY_paternal_257.1,hg002_chrY_paternal_257.1;transcript_id=HG03009_ch_T0000401;gene_id=HG03009_ch_G0000156;Parent=HG03009_ch_T0000401;transcript_name=hg002_chrY_paternal_257.1;gene_name=TTTY23B;ID=exon:HG03009_ch_T0000401:1;Name=TTTY23B;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	9992553	9993092	.	+	.	source_transcript=hg002_chrY_paternal_257.1;source_transcript_name=hg002_chrY_paternal_257.1;source_gene=hg002_chrY_paternal_257;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_257;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_257.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_257.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23B;alternative_source_transcripts=hg002_chrY_paternal_257.1,hg002_chrY_paternal_257.1;transcript_id=HG03009_ch_T0000401;gene_id=HG03009_ch_G0000156;Parent=HG03009_ch_T0000401;transcript_name=hg002_chrY_paternal_257.1;gene_name=TTTY23B;ID=intron:HG03009_ch_T0000401:1;Name=TTTY23B;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	9993093	9993401	.	+	.	source_transcript=hg002_chrY_paternal_257.1;source_transcript_name=hg002_chrY_paternal_257.1;source_gene=hg002_chrY_paternal_257;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_257;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_257.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_257.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23B;alternative_source_transcripts=hg002_chrY_paternal_257.1,hg002_chrY_paternal_257.1;transcript_id=HG03009_ch_T0000401;gene_id=HG03009_ch_G0000156;Parent=HG03009_ch_T0000401;transcript_name=hg002_chrY_paternal_257.1;gene_name=TTTY23B;ID=exon:HG03009_ch_T0000401:2;Name=TTTY23B;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	12361882	12364896	.	-	.	source_gene_common_name=LOC124904996;source_gene=hg002_chrY_paternal_275;alternative_source_transcripts=hg002_chrY_paternal_275.1,hg002_chrY_paternal_275.1;gene_id=HG03009_ch_G0000157;gene_biotype=lncRNA;gene_name=LOC124904996;gene_sources=liftoff;ID=HG03009_ch_G0000157;Name=LOC124904996
HG03009_chrY	CAT	transcript	12361882	12364896	1000	-	.	source_transcript=hg002_chrY_paternal_275.1;source_transcript_name=hg002_chrY_paternal_275.1;source_gene=hg002_chrY_paternal_275;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_275;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_275.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_275.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124904996;alternative_source_transcripts=hg002_chrY_paternal_275.1,hg002_chrY_paternal_275.1;transcript_id=HG03009_ch_T0000402;gene_id=HG03009_ch_G0000157;Parent=HG03009_ch_G0000157;transcript_name=hg002_chrY_paternal_275.1;gene_name=LOC124904996;ID=HG03009_ch_T0000402;Name=LOC124904996
HG03009_chrY	CAT	exon	12361882	12363147	.	-	.	source_transcript=hg002_chrY_paternal_275.1;source_transcript_name=hg002_chrY_paternal_275.1;source_gene=hg002_chrY_paternal_275;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_275;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_275.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_275.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124904996;alternative_source_transcripts=hg002_chrY_paternal_275.1,hg002_chrY_paternal_275.1;transcript_id=HG03009_ch_T0000402;gene_id=HG03009_ch_G0000157;Parent=HG03009_ch_T0000402;transcript_name=hg002_chrY_paternal_275.1;gene_name=LOC124904996;ID=exon:HG03009_ch_T0000402:0;Name=LOC124904996;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	12363148	12364474	.	-	.	source_transcript=hg002_chrY_paternal_275.1;source_transcript_name=hg002_chrY_paternal_275.1;source_gene=hg002_chrY_paternal_275;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_275;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_275.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_275.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124904996;alternative_source_transcripts=hg002_chrY_paternal_275.1,hg002_chrY_paternal_275.1;transcript_id=HG03009_ch_T0000402;gene_id=HG03009_ch_G0000157;Parent=HG03009_ch_T0000402;transcript_name=hg002_chrY_paternal_275.1;gene_name=LOC124904996;ID=intron:HG03009_ch_T0000402:0;Name=LOC124904996;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	12364475	12364896	.	-	.	source_transcript=hg002_chrY_paternal_275.1;source_transcript_name=hg002_chrY_paternal_275.1;source_gene=hg002_chrY_paternal_275;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_275;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_275.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_275.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124904996;alternative_source_transcripts=hg002_chrY_paternal_275.1,hg002_chrY_paternal_275.1;transcript_id=HG03009_ch_T0000402;gene_id=HG03009_ch_G0000157;Parent=HG03009_ch_T0000402;transcript_name=hg002_chrY_paternal_275.1;gene_name=LOC124904996;ID=exon:HG03009_ch_T0000402:1;Name=LOC124904996;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	12447414	12455771	.	-	.	source_gene_common_name=LOC105379273;source_gene=hg002_chrY_paternal_284;alternative_source_transcripts=hg002_chrY_paternal_284.1,hg002_chrY_paternal_284.1;gene_id=HG03009_ch_G0000158;gene_biotype=lncRNA;gene_name=LOC105379273;gene_sources=liftoff;ID=HG03009_ch_G0000158;Name=LOC105379273
HG03009_chrY	CAT	transcript	12447414	12455771	1000	-	.	source_transcript=hg002_chrY_paternal_284.1;source_transcript_name=hg002_chrY_paternal_284.1;source_gene=hg002_chrY_paternal_284;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_284;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_284.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_284.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379273;alternative_source_transcripts=hg002_chrY_paternal_284.1,hg002_chrY_paternal_284.1;transcript_id=HG03009_ch_T0000403;gene_id=HG03009_ch_G0000158;Parent=HG03009_ch_G0000158;transcript_name=hg002_chrY_paternal_284.1;gene_name=LOC105379273;ID=HG03009_ch_T0000403;Name=LOC105379273
HG03009_chrY	CAT	exon	12447414	12447455	.	-	.	source_transcript=hg002_chrY_paternal_284.1;source_transcript_name=hg002_chrY_paternal_284.1;source_gene=hg002_chrY_paternal_284;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_284;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_284.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_284.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379273;alternative_source_transcripts=hg002_chrY_paternal_284.1,hg002_chrY_paternal_284.1;transcript_id=HG03009_ch_T0000403;gene_id=HG03009_ch_G0000158;Parent=HG03009_ch_T0000403;transcript_name=hg002_chrY_paternal_284.1;gene_name=LOC105379273;ID=exon:HG03009_ch_T0000403:0;Name=LOC105379273;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	12447456	12453517	.	-	.	source_transcript=hg002_chrY_paternal_284.1;source_transcript_name=hg002_chrY_paternal_284.1;source_gene=hg002_chrY_paternal_284;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_284;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_284.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_284.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379273;alternative_source_transcripts=hg002_chrY_paternal_284.1,hg002_chrY_paternal_284.1;transcript_id=HG03009_ch_T0000403;gene_id=HG03009_ch_G0000158;Parent=HG03009_ch_T0000403;transcript_name=hg002_chrY_paternal_284.1;gene_name=LOC105379273;ID=intron:HG03009_ch_T0000403:0;Name=LOC105379273;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	12453518	12453576	.	-	.	source_transcript=hg002_chrY_paternal_284.1;source_transcript_name=hg002_chrY_paternal_284.1;source_gene=hg002_chrY_paternal_284;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_284;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_284.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_284.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379273;alternative_source_transcripts=hg002_chrY_paternal_284.1,hg002_chrY_paternal_284.1;transcript_id=HG03009_ch_T0000403;gene_id=HG03009_ch_G0000158;Parent=HG03009_ch_T0000403;transcript_name=hg002_chrY_paternal_284.1;gene_name=LOC105379273;ID=exon:HG03009_ch_T0000403:1;Name=LOC105379273;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	12453577	12455711	.	-	.	source_transcript=hg002_chrY_paternal_284.1;source_transcript_name=hg002_chrY_paternal_284.1;source_gene=hg002_chrY_paternal_284;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_284;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_284.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_284.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379273;alternative_source_transcripts=hg002_chrY_paternal_284.1,hg002_chrY_paternal_284.1;transcript_id=HG03009_ch_T0000403;gene_id=HG03009_ch_G0000158;Parent=HG03009_ch_T0000403;transcript_name=hg002_chrY_paternal_284.1;gene_name=LOC105379273;ID=intron:HG03009_ch_T0000403:1;Name=LOC105379273;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	12455712	12455771	.	-	.	source_transcript=hg002_chrY_paternal_284.1;source_transcript_name=hg002_chrY_paternal_284.1;source_gene=hg002_chrY_paternal_284;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_284;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_284.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_284.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379273;alternative_source_transcripts=hg002_chrY_paternal_284.1,hg002_chrY_paternal_284.1;transcript_id=HG03009_ch_T0000403;gene_id=HG03009_ch_G0000158;Parent=HG03009_ch_T0000403;transcript_name=hg002_chrY_paternal_284.1;gene_name=LOC105379273;ID=exon:HG03009_ch_T0000403:2;Name=LOC105379273;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	14333532	14341146	.	+	.	source_gene_common_name=LOC112268312;source_gene=hg002_chrY_paternal_318;gene_id=HG03009_ch_G0000159;gene_biotype=lncRNA;gene_name=LOC112268312;gene_sources=liftoff;ID=HG03009_ch_G0000159;Name=LOC112268312
HG03009_chrY	CAT	transcript	14333532	14341146	1000	+	.	source_transcript=hg002_chrY_paternal_318.1;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=HG03009_ch_T0000404;gene_id=HG03009_ch_G0000159;Parent=HG03009_ch_G0000159;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=HG03009_ch_T0000404;Name=LOC112268312
HG03009_chrY	CAT	exon	14333532	14333621	.	+	.	source_transcript=hg002_chrY_paternal_318.1;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=HG03009_ch_T0000404;gene_id=HG03009_ch_G0000159;Parent=HG03009_ch_T0000404;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:HG03009_ch_T0000404:0;Name=LOC112268312;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14333622	14333807	.	+	.	source_transcript=hg002_chrY_paternal_318.1;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=HG03009_ch_T0000404;gene_id=HG03009_ch_G0000159;Parent=HG03009_ch_T0000404;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=intron:HG03009_ch_T0000404:0;Name=LOC112268312;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14333808	14333969	.	+	.	source_transcript=hg002_chrY_paternal_318.1;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=HG03009_ch_T0000404;gene_id=HG03009_ch_G0000159;Parent=HG03009_ch_T0000404;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:HG03009_ch_T0000404:1;Name=LOC112268312;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14333970	14339947	.	+	.	source_transcript=hg002_chrY_paternal_318.1;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=HG03009_ch_T0000404;gene_id=HG03009_ch_G0000159;Parent=HG03009_ch_T0000404;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=intron:HG03009_ch_T0000404:1;Name=LOC112268312;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14339948	14341146	.	+	.	source_transcript=hg002_chrY_paternal_318.1;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=HG03009_ch_T0000404;gene_id=HG03009_ch_G0000159;Parent=HG03009_ch_T0000404;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:HG03009_ch_T0000404:2;Name=LOC112268312;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	14333532	14340083	1000	+	.	source_transcript=hg002_chrY_paternal_318.2;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=HG03009_ch_T0000405;gene_id=HG03009_ch_G0000159;Parent=HG03009_ch_G0000159;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=HG03009_ch_T0000405;Name=LOC112268312
HG03009_chrY	CAT	exon	14333532	14333621	.	+	.	source_transcript=hg002_chrY_paternal_318.2;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=HG03009_ch_T0000405;gene_id=HG03009_ch_G0000159;Parent=HG03009_ch_T0000405;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:HG03009_ch_T0000405:0;Name=LOC112268312;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14333622	14333807	.	+	.	source_transcript=hg002_chrY_paternal_318.2;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=HG03009_ch_T0000405;gene_id=HG03009_ch_G0000159;Parent=HG03009_ch_T0000405;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=intron:HG03009_ch_T0000405:0;Name=LOC112268312;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14333808	14333969	.	+	.	source_transcript=hg002_chrY_paternal_318.2;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=HG03009_ch_T0000405;gene_id=HG03009_ch_G0000159;Parent=HG03009_ch_T0000405;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:HG03009_ch_T0000405:1;Name=LOC112268312;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14333970	14339947	.	+	.	source_transcript=hg002_chrY_paternal_318.2;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=HG03009_ch_T0000405;gene_id=HG03009_ch_G0000159;Parent=HG03009_ch_T0000405;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=intron:HG03009_ch_T0000405:1;Name=LOC112268312;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14339948	14340083	.	+	.	source_transcript=hg002_chrY_paternal_318.2;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=HG03009_ch_T0000405;gene_id=HG03009_ch_G0000159;Parent=HG03009_ch_T0000405;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:HG03009_ch_T0000405:2;Name=LOC112268312;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	14333655	14341146	1000	+	.	source_transcript=hg002_chrY_paternal_318.3;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=HG03009_ch_T0000406;gene_id=HG03009_ch_G0000159;Parent=HG03009_ch_G0000159;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=HG03009_ch_T0000406;Name=LOC112268312
HG03009_chrY	CAT	exon	14333655	14333673	.	+	.	source_transcript=hg002_chrY_paternal_318.3;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=HG03009_ch_T0000406;gene_id=HG03009_ch_G0000159;Parent=HG03009_ch_T0000406;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:HG03009_ch_T0000406:0;Name=LOC112268312;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14333674	14333807	.	+	.	source_transcript=hg002_chrY_paternal_318.3;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=HG03009_ch_T0000406;gene_id=HG03009_ch_G0000159;Parent=HG03009_ch_T0000406;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=intron:HG03009_ch_T0000406:0;Name=LOC112268312;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14333808	14333969	.	+	.	source_transcript=hg002_chrY_paternal_318.3;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=HG03009_ch_T0000406;gene_id=HG03009_ch_G0000159;Parent=HG03009_ch_T0000406;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:HG03009_ch_T0000406:1;Name=LOC112268312;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14333970	14339947	.	+	.	source_transcript=hg002_chrY_paternal_318.3;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=HG03009_ch_T0000406;gene_id=HG03009_ch_G0000159;Parent=HG03009_ch_T0000406;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=intron:HG03009_ch_T0000406:1;Name=LOC112268312;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14339948	14341146	.	+	.	source_transcript=hg002_chrY_paternal_318.3;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=HG03009_ch_T0000406;gene_id=HG03009_ch_G0000159;Parent=HG03009_ch_T0000406;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:HG03009_ch_T0000406:2;Name=LOC112268312;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	14376326	14385260	.	-	.	source_gene_common_name=LOC107987343;source_gene=hg002_chrY_paternal_305;alternative_source_transcripts=hg002_chrY_paternal_305.1,hg002_chrY_paternal_305.1;gene_id=HG03009_ch_G0000160;gene_biotype=lncRNA;gene_name=LOC107987343;gene_sources=liftoff;ID=HG03009_ch_G0000160;Name=LOC107987343
HG03009_chrY	CAT	transcript	14376326	14385260	1000	-	.	source_transcript=hg002_chrY_paternal_305.1;source_transcript_name=hg002_chrY_paternal_305.1;source_gene=hg002_chrY_paternal_305;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_305;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_305.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_305.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987343;alternative_source_transcripts=hg002_chrY_paternal_305.1,hg002_chrY_paternal_305.1;transcript_id=HG03009_ch_T0000407;gene_id=HG03009_ch_G0000160;Parent=HG03009_ch_G0000160;transcript_name=hg002_chrY_paternal_305.1;gene_name=LOC107987343;ID=HG03009_ch_T0000407;Name=LOC107987343
HG03009_chrY	CAT	exon	14376326	14377718	.	-	.	source_transcript=hg002_chrY_paternal_305.1;source_transcript_name=hg002_chrY_paternal_305.1;source_gene=hg002_chrY_paternal_305;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_305;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_305.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_305.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987343;alternative_source_transcripts=hg002_chrY_paternal_305.1,hg002_chrY_paternal_305.1;transcript_id=HG03009_ch_T0000407;gene_id=HG03009_ch_G0000160;Parent=HG03009_ch_T0000407;transcript_name=hg002_chrY_paternal_305.1;gene_name=LOC107987343;ID=exon:HG03009_ch_T0000407:0;Name=LOC107987343;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14377719	14380280	.	-	.	source_transcript=hg002_chrY_paternal_305.1;source_transcript_name=hg002_chrY_paternal_305.1;source_gene=hg002_chrY_paternal_305;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_305;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_305.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_305.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987343;alternative_source_transcripts=hg002_chrY_paternal_305.1,hg002_chrY_paternal_305.1;transcript_id=HG03009_ch_T0000407;gene_id=HG03009_ch_G0000160;Parent=HG03009_ch_T0000407;transcript_name=hg002_chrY_paternal_305.1;gene_name=LOC107987343;ID=intron:HG03009_ch_T0000407:0;Name=LOC107987343;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14380281	14380407	.	-	.	source_transcript=hg002_chrY_paternal_305.1;source_transcript_name=hg002_chrY_paternal_305.1;source_gene=hg002_chrY_paternal_305;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_305;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_305.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_305.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987343;alternative_source_transcripts=hg002_chrY_paternal_305.1,hg002_chrY_paternal_305.1;transcript_id=HG03009_ch_T0000407;gene_id=HG03009_ch_G0000160;Parent=HG03009_ch_T0000407;transcript_name=hg002_chrY_paternal_305.1;gene_name=LOC107987343;ID=exon:HG03009_ch_T0000407:1;Name=LOC107987343;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14380408	14383364	.	-	.	source_transcript=hg002_chrY_paternal_305.1;source_transcript_name=hg002_chrY_paternal_305.1;source_gene=hg002_chrY_paternal_305;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_305;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_305.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_305.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987343;alternative_source_transcripts=hg002_chrY_paternal_305.1,hg002_chrY_paternal_305.1;transcript_id=HG03009_ch_T0000407;gene_id=HG03009_ch_G0000160;Parent=HG03009_ch_T0000407;transcript_name=hg002_chrY_paternal_305.1;gene_name=LOC107987343;ID=intron:HG03009_ch_T0000407:1;Name=LOC107987343;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14383365	14385260	.	-	.	source_transcript=hg002_chrY_paternal_305.1;source_transcript_name=hg002_chrY_paternal_305.1;source_gene=hg002_chrY_paternal_305;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_305;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_305.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_305.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987343;alternative_source_transcripts=hg002_chrY_paternal_305.1,hg002_chrY_paternal_305.1;transcript_id=HG03009_ch_T0000407;gene_id=HG03009_ch_G0000160;Parent=HG03009_ch_T0000407;transcript_name=hg002_chrY_paternal_305.1;gene_name=LOC107987343;ID=exon:HG03009_ch_T0000407:2;Name=LOC107987343;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	14427861	14443335	.	-	.	source_gene_common_name=GYG2P1;source_gene=hg002_chrY_paternal_306;alternative_source_transcripts=hg002_chrY_paternal_306.1,hg002_chrY_paternal_306.1;gene_id=HG03009_ch_G0000161;gene_biotype=transcribed_pseudogene;gene_name=GYG2P1;gene_sources=liftoff;ID=HG03009_ch_G0000161;Name=GYG2P1
HG03009_chrY	CAT	transcript	14427861	14443335	1000	-	.	source_transcript=hg002_chrY_paternal_306.1;source_transcript_name=hg002_chrY_paternal_306.1;source_gene=hg002_chrY_paternal_306;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_306;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_306.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_306.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GYG2P1;alternative_source_transcripts=hg002_chrY_paternal_306.1,hg002_chrY_paternal_306.1;transcript_id=HG03009_ch_T0000408;gene_id=HG03009_ch_G0000161;Parent=HG03009_ch_G0000161;transcript_name=hg002_chrY_paternal_306.1;gene_name=GYG2P1;ID=HG03009_ch_T0000408;Name=GYG2P1
HG03009_chrY	CAT	exon	14427861	14428245	.	-	.	source_transcript=hg002_chrY_paternal_306.1;source_transcript_name=hg002_chrY_paternal_306.1;source_gene=hg002_chrY_paternal_306;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_306;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_306.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_306.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GYG2P1;alternative_source_transcripts=hg002_chrY_paternal_306.1,hg002_chrY_paternal_306.1;transcript_id=HG03009_ch_T0000408;gene_id=HG03009_ch_G0000161;Parent=HG03009_ch_T0000408;transcript_name=hg002_chrY_paternal_306.1;gene_name=GYG2P1;ID=exon:HG03009_ch_T0000408:0;Name=GYG2P1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14428246	14428540	.	-	.	source_transcript=hg002_chrY_paternal_306.1;source_transcript_name=hg002_chrY_paternal_306.1;source_gene=hg002_chrY_paternal_306;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_306;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_306.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_306.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GYG2P1;alternative_source_transcripts=hg002_chrY_paternal_306.1,hg002_chrY_paternal_306.1;transcript_id=HG03009_ch_T0000408;gene_id=HG03009_ch_G0000161;Parent=HG03009_ch_T0000408;transcript_name=hg002_chrY_paternal_306.1;gene_name=GYG2P1;ID=intron:HG03009_ch_T0000408:0;Name=GYG2P1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14428541	14428682	.	-	.	source_transcript=hg002_chrY_paternal_306.1;source_transcript_name=hg002_chrY_paternal_306.1;source_gene=hg002_chrY_paternal_306;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_306;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_306.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_306.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GYG2P1;alternative_source_transcripts=hg002_chrY_paternal_306.1,hg002_chrY_paternal_306.1;transcript_id=HG03009_ch_T0000408;gene_id=HG03009_ch_G0000161;Parent=HG03009_ch_T0000408;transcript_name=hg002_chrY_paternal_306.1;gene_name=GYG2P1;ID=exon:HG03009_ch_T0000408:1;Name=GYG2P1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14428683	14428937	.	-	.	source_transcript=hg002_chrY_paternal_306.1;source_transcript_name=hg002_chrY_paternal_306.1;source_gene=hg002_chrY_paternal_306;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_306;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_306.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_306.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GYG2P1;alternative_source_transcripts=hg002_chrY_paternal_306.1,hg002_chrY_paternal_306.1;transcript_id=HG03009_ch_T0000408;gene_id=HG03009_ch_G0000161;Parent=HG03009_ch_T0000408;transcript_name=hg002_chrY_paternal_306.1;gene_name=GYG2P1;ID=intron:HG03009_ch_T0000408:1;Name=GYG2P1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14428938	14429054	.	-	.	source_transcript=hg002_chrY_paternal_306.1;source_transcript_name=hg002_chrY_paternal_306.1;source_gene=hg002_chrY_paternal_306;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_306;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_306.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_306.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GYG2P1;alternative_source_transcripts=hg002_chrY_paternal_306.1,hg002_chrY_paternal_306.1;transcript_id=HG03009_ch_T0000408;gene_id=HG03009_ch_G0000161;Parent=HG03009_ch_T0000408;transcript_name=hg002_chrY_paternal_306.1;gene_name=GYG2P1;ID=exon:HG03009_ch_T0000408:2;Name=GYG2P1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14429055	14442060	.	-	.	source_transcript=hg002_chrY_paternal_306.1;source_transcript_name=hg002_chrY_paternal_306.1;source_gene=hg002_chrY_paternal_306;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_306;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_306.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_306.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GYG2P1;alternative_source_transcripts=hg002_chrY_paternal_306.1,hg002_chrY_paternal_306.1;transcript_id=HG03009_ch_T0000408;gene_id=HG03009_ch_G0000161;Parent=HG03009_ch_T0000408;transcript_name=hg002_chrY_paternal_306.1;gene_name=GYG2P1;ID=intron:HG03009_ch_T0000408:2;Name=GYG2P1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14442061	14442199	.	-	.	source_transcript=hg002_chrY_paternal_306.1;source_transcript_name=hg002_chrY_paternal_306.1;source_gene=hg002_chrY_paternal_306;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_306;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_306.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_306.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GYG2P1;alternative_source_transcripts=hg002_chrY_paternal_306.1,hg002_chrY_paternal_306.1;transcript_id=HG03009_ch_T0000408;gene_id=HG03009_ch_G0000161;Parent=HG03009_ch_T0000408;transcript_name=hg002_chrY_paternal_306.1;gene_name=GYG2P1;ID=exon:HG03009_ch_T0000408:3;Name=GYG2P1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14442200	14443294	.	-	.	source_transcript=hg002_chrY_paternal_306.1;source_transcript_name=hg002_chrY_paternal_306.1;source_gene=hg002_chrY_paternal_306;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_306;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_306.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_306.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GYG2P1;alternative_source_transcripts=hg002_chrY_paternal_306.1,hg002_chrY_paternal_306.1;transcript_id=HG03009_ch_T0000408;gene_id=HG03009_ch_G0000161;Parent=HG03009_ch_T0000408;transcript_name=hg002_chrY_paternal_306.1;gene_name=GYG2P1;ID=intron:HG03009_ch_T0000408:3;Name=GYG2P1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14443295	14443335	.	-	.	source_transcript=hg002_chrY_paternal_306.1;source_transcript_name=hg002_chrY_paternal_306.1;source_gene=hg002_chrY_paternal_306;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_306;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_306.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_306.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GYG2P1;alternative_source_transcripts=hg002_chrY_paternal_306.1,hg002_chrY_paternal_306.1;transcript_id=HG03009_ch_T0000408;gene_id=HG03009_ch_G0000161;Parent=HG03009_ch_T0000408;transcript_name=hg002_chrY_paternal_306.1;gene_name=GYG2P1;ID=exon:HG03009_ch_T0000408:4;Name=GYG2P1;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	14683276	14685443	.	-	.	source_gene_common_name=LOC112268311;source_gene=hg002_chrY_paternal_311;alternative_source_transcripts=hg002_chrY_paternal_311.1,hg002_chrY_paternal_311.1;gene_id=HG03009_ch_G0000162;gene_biotype=lncRNA;gene_name=LOC112268311;gene_sources=liftoff;ID=HG03009_ch_G0000162;Name=LOC112268311
HG03009_chrY	CAT	transcript	14683276	14685443	1000	-	.	source_transcript=hg002_chrY_paternal_311.1;source_transcript_name=hg002_chrY_paternal_311.1;source_gene=hg002_chrY_paternal_311;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_311;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_311.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_311.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268311;alternative_source_transcripts=hg002_chrY_paternal_311.1,hg002_chrY_paternal_311.1;transcript_id=HG03009_ch_T0000409;gene_id=HG03009_ch_G0000162;Parent=HG03009_ch_G0000162;transcript_name=hg002_chrY_paternal_311.1;gene_name=LOC112268311;ID=HG03009_ch_T0000409;Name=LOC112268311
HG03009_chrY	CAT	exon	14683276	14684711	.	-	.	source_transcript=hg002_chrY_paternal_311.1;source_transcript_name=hg002_chrY_paternal_311.1;source_gene=hg002_chrY_paternal_311;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_311;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_311.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_311.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268311;alternative_source_transcripts=hg002_chrY_paternal_311.1,hg002_chrY_paternal_311.1;transcript_id=HG03009_ch_T0000409;gene_id=HG03009_ch_G0000162;Parent=HG03009_ch_T0000409;transcript_name=hg002_chrY_paternal_311.1;gene_name=LOC112268311;ID=exon:HG03009_ch_T0000409:0;Name=LOC112268311;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14684712	14685320	.	-	.	source_transcript=hg002_chrY_paternal_311.1;source_transcript_name=hg002_chrY_paternal_311.1;source_gene=hg002_chrY_paternal_311;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_311;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_311.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_311.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268311;alternative_source_transcripts=hg002_chrY_paternal_311.1,hg002_chrY_paternal_311.1;transcript_id=HG03009_ch_T0000409;gene_id=HG03009_ch_G0000162;Parent=HG03009_ch_T0000409;transcript_name=hg002_chrY_paternal_311.1;gene_name=LOC112268311;ID=intron:HG03009_ch_T0000409:0;Name=LOC112268311;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14685321	14685443	.	-	.	source_transcript=hg002_chrY_paternal_311.1;source_transcript_name=hg002_chrY_paternal_311.1;source_gene=hg002_chrY_paternal_311;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_311;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_311.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_311.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268311;alternative_source_transcripts=hg002_chrY_paternal_311.1,hg002_chrY_paternal_311.1;transcript_id=HG03009_ch_T0000409;gene_id=HG03009_ch_G0000162;Parent=HG03009_ch_T0000409;transcript_name=hg002_chrY_paternal_311.1;gene_name=LOC112268311;ID=exon:HG03009_ch_T0000409:1;Name=LOC112268311;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	14683276	14685452	1000	-	.	source_transcript=hg002_chrY_paternal_311.2;source_transcript_name=hg002_chrY_paternal_311.1;source_gene=hg002_chrY_paternal_311;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_311;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_311.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_311.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268311;alternative_source_transcripts=hg002_chrY_paternal_311.2,hg002_chrY_paternal_311.2;transcript_id=HG03009_ch_T0000410;gene_id=HG03009_ch_G0000162;Parent=HG03009_ch_G0000162;transcript_name=hg002_chrY_paternal_311.1;gene_name=LOC112268311;ID=HG03009_ch_T0000410;Name=LOC112268311
HG03009_chrY	CAT	exon	14683276	14684711	.	-	.	source_transcript=hg002_chrY_paternal_311.2;source_transcript_name=hg002_chrY_paternal_311.1;source_gene=hg002_chrY_paternal_311;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_311;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_311.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_311.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268311;alternative_source_transcripts=hg002_chrY_paternal_311.2,hg002_chrY_paternal_311.2;transcript_id=HG03009_ch_T0000410;gene_id=HG03009_ch_G0000162;Parent=HG03009_ch_T0000410;transcript_name=hg002_chrY_paternal_311.1;gene_name=LOC112268311;ID=exon:HG03009_ch_T0000410:0;Name=LOC112268311;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14684712	14685263	.	-	.	source_transcript=hg002_chrY_paternal_311.2;source_transcript_name=hg002_chrY_paternal_311.1;source_gene=hg002_chrY_paternal_311;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_311;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_311.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_311.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268311;alternative_source_transcripts=hg002_chrY_paternal_311.2,hg002_chrY_paternal_311.2;transcript_id=HG03009_ch_T0000410;gene_id=HG03009_ch_G0000162;Parent=HG03009_ch_T0000410;transcript_name=hg002_chrY_paternal_311.1;gene_name=LOC112268311;ID=intron:HG03009_ch_T0000410:0;Name=LOC112268311;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14685264	14685452	.	-	.	source_transcript=hg002_chrY_paternal_311.2;source_transcript_name=hg002_chrY_paternal_311.1;source_gene=hg002_chrY_paternal_311;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_311;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_311.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_311.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268311;alternative_source_transcripts=hg002_chrY_paternal_311.2,hg002_chrY_paternal_311.2;transcript_id=HG03009_ch_T0000410;gene_id=HG03009_ch_G0000162;Parent=HG03009_ch_T0000410;transcript_name=hg002_chrY_paternal_311.1;gene_name=LOC112268311;ID=exon:HG03009_ch_T0000410:1;Name=LOC112268311;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	14684312	14714192	.	+	.	source_gene_common_name=TTTY15;source_gene=hg002_chrY_paternal_312;alternative_source_transcripts=hg002_chrY_paternal_312.1,hg002_chrY_paternal_312.1;gene_id=HG03009_ch_G0000163;gene_biotype=lncRNA;gene_name=TTTY15;gene_sources=liftoff;ID=HG03009_ch_G0000163;Name=TTTY15
HG03009_chrY	CAT	transcript	14684312	14714192	1000	+	.	source_transcript=hg002_chrY_paternal_312.1;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.1,hg002_chrY_paternal_312.1;transcript_id=HG03009_ch_T0000411;gene_id=HG03009_ch_G0000163;Parent=HG03009_ch_G0000163;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=HG03009_ch_T0000411;Name=TTTY15
HG03009_chrY	CAT	exon	14684312	14684666	.	+	.	source_transcript=hg002_chrY_paternal_312.1;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.1,hg002_chrY_paternal_312.1;transcript_id=HG03009_ch_T0000411;gene_id=HG03009_ch_G0000163;Parent=HG03009_ch_T0000411;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG03009_ch_T0000411:0;Name=TTTY15;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14684667	14686599	.	+	.	source_transcript=hg002_chrY_paternal_312.1;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.1,hg002_chrY_paternal_312.1;transcript_id=HG03009_ch_T0000411;gene_id=HG03009_ch_G0000163;Parent=HG03009_ch_T0000411;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=intron:HG03009_ch_T0000411:0;Name=TTTY15;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14686600	14686646	.	+	.	source_transcript=hg002_chrY_paternal_312.1;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.1,hg002_chrY_paternal_312.1;transcript_id=HG03009_ch_T0000411;gene_id=HG03009_ch_G0000163;Parent=HG03009_ch_T0000411;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG03009_ch_T0000411:1;Name=TTTY15;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14686647	14708471	.	+	.	source_transcript=hg002_chrY_paternal_312.1;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.1,hg002_chrY_paternal_312.1;transcript_id=HG03009_ch_T0000411;gene_id=HG03009_ch_G0000163;Parent=HG03009_ch_T0000411;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=intron:HG03009_ch_T0000411:1;Name=TTTY15;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14708472	14708565	.	+	.	source_transcript=hg002_chrY_paternal_312.1;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.1,hg002_chrY_paternal_312.1;transcript_id=HG03009_ch_T0000411;gene_id=HG03009_ch_G0000163;Parent=HG03009_ch_T0000411;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG03009_ch_T0000411:2;Name=TTTY15;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14708566	14709422	.	+	.	source_transcript=hg002_chrY_paternal_312.1;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.1,hg002_chrY_paternal_312.1;transcript_id=HG03009_ch_T0000411;gene_id=HG03009_ch_G0000163;Parent=HG03009_ch_T0000411;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=intron:HG03009_ch_T0000411:2;Name=TTTY15;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14709423	14714192	.	+	.	source_transcript=hg002_chrY_paternal_312.1;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.1,hg002_chrY_paternal_312.1;transcript_id=HG03009_ch_T0000411;gene_id=HG03009_ch_G0000163;Parent=HG03009_ch_T0000411;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG03009_ch_T0000411:3;Name=TTTY15;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	14684312	14714192	1000	+	.	source_transcript=hg002_chrY_paternal_312.2;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.2,hg002_chrY_paternal_312.2;transcript_id=HG03009_ch_T0000412;gene_id=HG03009_ch_G0000163;Parent=HG03009_ch_G0000163;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=HG03009_ch_T0000412;Name=TTTY15
HG03009_chrY	CAT	exon	14684312	14684666	.	+	.	source_transcript=hg002_chrY_paternal_312.2;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.2,hg002_chrY_paternal_312.2;transcript_id=HG03009_ch_T0000412;gene_id=HG03009_ch_G0000163;Parent=HG03009_ch_T0000412;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG03009_ch_T0000412:0;Name=TTTY15;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14684667	14708471	.	+	.	source_transcript=hg002_chrY_paternal_312.2;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.2,hg002_chrY_paternal_312.2;transcript_id=HG03009_ch_T0000412;gene_id=HG03009_ch_G0000163;Parent=HG03009_ch_T0000412;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=intron:HG03009_ch_T0000412:0;Name=TTTY15;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14708472	14708565	.	+	.	source_transcript=hg002_chrY_paternal_312.2;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.2,hg002_chrY_paternal_312.2;transcript_id=HG03009_ch_T0000412;gene_id=HG03009_ch_G0000163;Parent=HG03009_ch_T0000412;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG03009_ch_T0000412:1;Name=TTTY15;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14708566	14709422	.	+	.	source_transcript=hg002_chrY_paternal_312.2;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.2,hg002_chrY_paternal_312.2;transcript_id=HG03009_ch_T0000412;gene_id=HG03009_ch_G0000163;Parent=HG03009_ch_T0000412;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=intron:HG03009_ch_T0000412:1;Name=TTTY15;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14709423	14714192	.	+	.	source_transcript=hg002_chrY_paternal_312.2;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.2,hg002_chrY_paternal_312.2;transcript_id=HG03009_ch_T0000412;gene_id=HG03009_ch_G0000163;Parent=HG03009_ch_T0000412;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG03009_ch_T0000412:2;Name=TTTY15;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	14684312	14714192	1000	+	.	source_transcript=hg002_chrY_paternal_312.3;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.3,hg002_chrY_paternal_312.3;transcript_id=HG03009_ch_T0000413;gene_id=HG03009_ch_G0000163;Parent=HG03009_ch_G0000163;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=HG03009_ch_T0000413;Name=TTTY15
HG03009_chrY	CAT	exon	14684312	14684666	.	+	.	source_transcript=hg002_chrY_paternal_312.3;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.3,hg002_chrY_paternal_312.3;transcript_id=HG03009_ch_T0000413;gene_id=HG03009_ch_G0000163;Parent=HG03009_ch_T0000413;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG03009_ch_T0000413:0;Name=TTTY15;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14684667	14708471	.	+	.	source_transcript=hg002_chrY_paternal_312.3;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.3,hg002_chrY_paternal_312.3;transcript_id=HG03009_ch_T0000413;gene_id=HG03009_ch_G0000163;Parent=HG03009_ch_T0000413;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=intron:HG03009_ch_T0000413:0;Name=TTTY15;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14708472	14708565	.	+	.	source_transcript=hg002_chrY_paternal_312.3;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.3,hg002_chrY_paternal_312.3;transcript_id=HG03009_ch_T0000413;gene_id=HG03009_ch_G0000163;Parent=HG03009_ch_T0000413;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG03009_ch_T0000413:1;Name=TTTY15;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14708566	14709643	.	+	.	source_transcript=hg002_chrY_paternal_312.3;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.3,hg002_chrY_paternal_312.3;transcript_id=HG03009_ch_T0000413;gene_id=HG03009_ch_G0000163;Parent=HG03009_ch_T0000413;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=intron:HG03009_ch_T0000413:1;Name=TTTY15;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14709644	14714192	.	+	.	source_transcript=hg002_chrY_paternal_312.3;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.3,hg002_chrY_paternal_312.3;transcript_id=HG03009_ch_T0000413;gene_id=HG03009_ch_G0000163;Parent=HG03009_ch_T0000413;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG03009_ch_T0000413:2;Name=TTTY15;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	14684312	14714192	1000	+	.	source_transcript=hg002_chrY_paternal_312.4;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.4,hg002_chrY_paternal_312.4;transcript_id=HG03009_ch_T0000414;gene_id=HG03009_ch_G0000163;Parent=HG03009_ch_G0000163;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=HG03009_ch_T0000414;Name=TTTY15
HG03009_chrY	CAT	exon	14684312	14684666	.	+	.	source_transcript=hg002_chrY_paternal_312.4;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.4,hg002_chrY_paternal_312.4;transcript_id=HG03009_ch_T0000414;gene_id=HG03009_ch_G0000163;Parent=HG03009_ch_T0000414;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG03009_ch_T0000414:0;Name=TTTY15;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14684667	14686599	.	+	.	source_transcript=hg002_chrY_paternal_312.4;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.4,hg002_chrY_paternal_312.4;transcript_id=HG03009_ch_T0000414;gene_id=HG03009_ch_G0000163;Parent=HG03009_ch_T0000414;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=intron:HG03009_ch_T0000414:0;Name=TTTY15;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14686600	14686646	.	+	.	source_transcript=hg002_chrY_paternal_312.4;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.4,hg002_chrY_paternal_312.4;transcript_id=HG03009_ch_T0000414;gene_id=HG03009_ch_G0000163;Parent=HG03009_ch_T0000414;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG03009_ch_T0000414:1;Name=TTTY15;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14686647	14708471	.	+	.	source_transcript=hg002_chrY_paternal_312.4;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.4,hg002_chrY_paternal_312.4;transcript_id=HG03009_ch_T0000414;gene_id=HG03009_ch_G0000163;Parent=HG03009_ch_T0000414;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=intron:HG03009_ch_T0000414:1;Name=TTTY15;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14708472	14708565	.	+	.	source_transcript=hg002_chrY_paternal_312.4;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.4,hg002_chrY_paternal_312.4;transcript_id=HG03009_ch_T0000414;gene_id=HG03009_ch_G0000163;Parent=HG03009_ch_T0000414;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG03009_ch_T0000414:2;Name=TTTY15;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14708566	14709643	.	+	.	source_transcript=hg002_chrY_paternal_312.4;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.4,hg002_chrY_paternal_312.4;transcript_id=HG03009_ch_T0000414;gene_id=HG03009_ch_G0000163;Parent=HG03009_ch_T0000414;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=intron:HG03009_ch_T0000414:2;Name=TTTY15;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14709644	14714192	.	+	.	source_transcript=hg002_chrY_paternal_312.4;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.4,hg002_chrY_paternal_312.4;transcript_id=HG03009_ch_T0000414;gene_id=HG03009_ch_G0000163;Parent=HG03009_ch_T0000414;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG03009_ch_T0000414:3;Name=TTTY15;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	14684312	14714192	1000	+	.	source_transcript=hg002_chrY_paternal_312.5;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.5,hg002_chrY_paternal_312.5;transcript_id=HG03009_ch_T0000415;gene_id=HG03009_ch_G0000163;Parent=HG03009_ch_G0000163;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=HG03009_ch_T0000415;Name=TTTY15
HG03009_chrY	CAT	exon	14684312	14684666	.	+	.	source_transcript=hg002_chrY_paternal_312.5;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.5,hg002_chrY_paternal_312.5;transcript_id=HG03009_ch_T0000415;gene_id=HG03009_ch_G0000163;Parent=HG03009_ch_T0000415;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG03009_ch_T0000415:0;Name=TTTY15;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14684667	14686599	.	+	.	source_transcript=hg002_chrY_paternal_312.5;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.5,hg002_chrY_paternal_312.5;transcript_id=HG03009_ch_T0000415;gene_id=HG03009_ch_G0000163;Parent=HG03009_ch_T0000415;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=intron:HG03009_ch_T0000415:0;Name=TTTY15;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14686600	14686646	.	+	.	source_transcript=hg002_chrY_paternal_312.5;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.5,hg002_chrY_paternal_312.5;transcript_id=HG03009_ch_T0000415;gene_id=HG03009_ch_G0000163;Parent=HG03009_ch_T0000415;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG03009_ch_T0000415:1;Name=TTTY15;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14686647	14708471	.	+	.	source_transcript=hg002_chrY_paternal_312.5;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.5,hg002_chrY_paternal_312.5;transcript_id=HG03009_ch_T0000415;gene_id=HG03009_ch_G0000163;Parent=HG03009_ch_T0000415;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=intron:HG03009_ch_T0000415:1;Name=TTTY15;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14708472	14708565	.	+	.	source_transcript=hg002_chrY_paternal_312.5;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.5,hg002_chrY_paternal_312.5;transcript_id=HG03009_ch_T0000415;gene_id=HG03009_ch_G0000163;Parent=HG03009_ch_T0000415;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG03009_ch_T0000415:2;Name=TTTY15;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14708566	14712284	.	+	.	source_transcript=hg002_chrY_paternal_312.5;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.5,hg002_chrY_paternal_312.5;transcript_id=HG03009_ch_T0000415;gene_id=HG03009_ch_G0000163;Parent=HG03009_ch_T0000415;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=intron:HG03009_ch_T0000415:2;Name=TTTY15;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14712285	14714192	.	+	.	source_transcript=hg002_chrY_paternal_312.5;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.5,hg002_chrY_paternal_312.5;transcript_id=HG03009_ch_T0000415;gene_id=HG03009_ch_G0000163;Parent=HG03009_ch_T0000415;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG03009_ch_T0000415:3;Name=TTTY15;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	14723190	14882785	.	+	.	source_gene_common_name=USP9Y;source_gene=hg002_chrY_paternal_313;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;gene_id=HG03009_ch_G0000164;gene_biotype=protein_coding;gene_name=USP9Y;gene_sources=liftoff,augTM;ID=HG03009_ch_G0000164;Name=USP9Y
HG03009_chrY	CAT	transcript	14723190	14882785	100	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_G0000164;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=HG03009_ch_T0000416;Name=USP9Y
HG03009_chrY	CAT	exon	14723190	14724014	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000416:0;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14724015	14730596	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000416:0;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14730597	14730656	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000416:1;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14730657	14731350	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000416:1;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14731351	14731506	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000416:2;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14731411	14731506	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000416:0;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	14731411	14731413	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=start_codon:HG03009_ch_T0000416;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14731507	14742551	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000416:2;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14742552	14742700	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000416:3;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14742552	14742700	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000416:1;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14742701	14744069	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000416:3;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14744070	14744149	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000416:4;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14744070	14744149	.	+	1	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000416:2;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14744150	14747074	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000416:4;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14747075	14747187	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000416:5;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14747075	14747187	.	+	2	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000416:3;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14747188	14748536	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000416:5;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14748537	14748755	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000416:6;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14748537	14748755	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000416:4;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14748756	14757573	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000416:6;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14757574	14757689	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000416:7;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14757574	14757689	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000416:5;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14757690	14757959	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000416:7;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14757960	14758211	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000416:8;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14757960	14758211	.	+	1	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000416:6;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14758212	14758372	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000416:8;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14758373	14758511	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000416:9;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14758373	14758511	.	+	1	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000416:7;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14758512	14760118	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000416:9;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14760119	14760271	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000416:10;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14760119	14760271	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000416:8;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14760272	14761486	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000416:10;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14761487	14761591	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000416:11;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14761487	14761591	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000416:9;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14761592	14779153	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000416:11;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14779154	14779360	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000416:12;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14779154	14779360	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000416:10;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14779361	14780467	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000416:12;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14780468	14780604	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000416:13;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14780468	14780604	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000416:11;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14780605	14782445	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000416:13;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14782446	14782579	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000416:14;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14782446	14782579	.	+	1	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000416:12;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14782580	14793029	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000416:14;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14793030	14793117	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000416:15;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14793030	14793117	.	+	2	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000416:13;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14793118	14795544	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000416:15;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14795545	14795887	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000416:16;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14795545	14795887	.	+	1	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000416:14;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14795888	14797432	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000416:16;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14797433	14797528	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000416:17;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14797433	14797528	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000416:15;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14797529	14798610	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000416:17;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14798611	14798822	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000416:18;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14798611	14798822	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000416:16;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14798823	14799980	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000416:18;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14799981	14800221	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000416:19;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14799981	14800221	.	+	1	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000416:17;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14800222	14800567	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000416:19;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14800568	14800717	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000416:20;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14800568	14800717	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000416:18;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14800718	14801487	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000416:20;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14801488	14801608	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000416:21;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14801488	14801608	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000416:19;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14801609	14808164	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000416:21;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14808165	14808295	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000416:22;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14808165	14808295	.	+	2	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000416:20;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14808296	14808482	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000416:22;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14808483	14808761	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000416:23;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14808483	14808761	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000416:21;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14808762	14812367	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000416:23;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14812368	14812493	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000416:24;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14812368	14812493	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000416:22;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14812494	14813459	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000416:24;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14813460	14813585	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000416:25;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14813460	14813585	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000416:23;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14813586	14814992	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000416:25;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14814993	14815162	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000416:26;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14814993	14815162	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000416:24;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14815163	14832138	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000416:26;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14832139	14832247	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000416:27;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14832139	14832247	.	+	1	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000416:25;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14832248	14832631	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000416:27;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14832632	14832778	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000416:28;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14832632	14832778	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000416:26;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14832779	14833594	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000416:28;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14833595	14833741	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000416:29;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14833595	14833741	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000416:27;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14833742	14834789	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000416:29;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14834790	14835012	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000416:30;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14834790	14835012	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000416:28;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14835013	14838083	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000416:30;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14838084	14838304	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000416:31;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14838084	14838304	.	+	2	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000416:29;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14838305	14840379	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000416:31;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14840380	14840570	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000416:32;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14840380	14840570	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000416:30;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14840571	14855633	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000416:32;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14855634	14855807	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000416:33;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14855634	14855807	.	+	1	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000416:31;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14855808	14859856	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000416:33;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14859857	14859998	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000416:34;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14859857	14859998	.	+	1	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000416:32;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14859999	14861809	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000416:34;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14861810	14862560	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000416:35;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14861810	14862560	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000416:33;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14862561	14862955	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000416:35;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14862956	14863079	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000416:36;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14862956	14863079	.	+	2	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000416:34;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14863080	14864185	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000416:36;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14864186	14864411	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000416:37;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14864186	14864411	.	+	1	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000416:35;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14864412	14865009	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000416:37;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14865010	14865139	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000416:38;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14865010	14865139	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000416:36;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14865140	14868278	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000416:38;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14868279	14868464	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000416:39;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14868279	14868464	.	+	2	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000416:37;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14868465	14868878	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000416:39;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14868879	14869099	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000416:40;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14868879	14869099	.	+	2	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000416:38;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14869100	14869184	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000416:40;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14869185	14869273	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000416:41;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14869185	14869273	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000416:39;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14869274	14878285	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000416:41;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14878286	14878442	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000416:42;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14878286	14878442	.	+	1	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000416:40;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14878443	14878578	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000416:42;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14878579	14878791	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000416:43;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14878579	14878791	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000416:41;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14878792	14879511	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000416:43;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14879512	14879607	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000416:44;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14879512	14879607	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000416:42;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14879608	14881224	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000416:44;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14881225	14882785	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000416:45;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14881225	14881362	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000416:43;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	14881360	14881362	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000416;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000416;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=stop_codon:HG03009_ch_T0000416;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	14729816	14882785	100	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_G0000164;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=HG03009_ch_T0000417;Name=USP9Y
HG03009_chrY	CAT	exon	14729816	14729844	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000417:0;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14729845	14730596	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000417:0;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14730597	14730656	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000417:1;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14730657	14731350	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000417:1;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14731351	14731506	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000417:2;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14731411	14731506	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000417:0;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	14731411	14731413	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=start_codon:HG03009_ch_T0000417;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14731507	14742551	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000417:2;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14742552	14742700	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000417:3;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14742552	14742700	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000417:1;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14742701	14744069	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000417:3;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14744070	14744149	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000417:4;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14744070	14744149	.	+	1	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000417:2;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14744150	14747074	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000417:4;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14747075	14747187	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000417:5;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14747075	14747187	.	+	2	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000417:3;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14747188	14748536	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000417:5;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14748537	14748755	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000417:6;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14748537	14748755	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000417:4;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14748756	14757573	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000417:6;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14757574	14757689	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000417:7;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14757574	14757689	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000417:5;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14757690	14757959	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000417:7;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14757960	14758211	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000417:8;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14757960	14758211	.	+	1	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000417:6;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14758212	14758372	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000417:8;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14758373	14758511	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000417:9;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14758373	14758511	.	+	1	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000417:7;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14758512	14760118	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000417:9;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14760119	14760271	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000417:10;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14760119	14760271	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000417:8;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14760272	14761486	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000417:10;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14761487	14761591	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000417:11;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14761487	14761591	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000417:9;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14761592	14779153	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000417:11;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14779154	14779360	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000417:12;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14779154	14779360	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000417:10;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14779361	14780467	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000417:12;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14780468	14780604	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000417:13;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14780468	14780604	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000417:11;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14780605	14782445	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000417:13;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14782446	14782579	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000417:14;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14782446	14782579	.	+	1	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000417:12;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14782580	14793029	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000417:14;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14793030	14793117	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000417:15;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14793030	14793117	.	+	2	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000417:13;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14793118	14795544	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000417:15;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14795545	14795887	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000417:16;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14795545	14795887	.	+	1	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000417:14;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14795888	14797432	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000417:16;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14797433	14797528	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000417:17;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14797433	14797528	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000417:15;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14797529	14798610	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000417:17;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14798611	14798822	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000417:18;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14798611	14798822	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000417:16;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14798823	14799980	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000417:18;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14799981	14800221	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000417:19;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14799981	14800221	.	+	1	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000417:17;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14800222	14800567	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000417:19;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14800568	14800717	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000417:20;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14800568	14800717	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000417:18;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14800718	14801487	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000417:20;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14801488	14801608	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000417:21;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14801488	14801608	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000417:19;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14801609	14808164	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000417:21;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14808165	14808295	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000417:22;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14808165	14808295	.	+	2	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000417:20;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14808296	14808482	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000417:22;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14808483	14808761	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000417:23;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14808483	14808761	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000417:21;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14808762	14812367	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000417:23;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14812368	14812493	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000417:24;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14812368	14812493	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000417:22;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14812494	14813459	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000417:24;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14813460	14813585	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000417:25;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14813460	14813585	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000417:23;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14813586	14814992	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000417:25;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14814993	14815162	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000417:26;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14814993	14815162	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000417:24;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14815163	14832138	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000417:26;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14832139	14832247	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000417:27;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14832139	14832247	.	+	1	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000417:25;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14832248	14832631	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000417:27;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14832632	14832778	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000417:28;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14832632	14832778	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000417:26;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14832779	14833594	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000417:28;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14833595	14833741	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000417:29;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14833595	14833741	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000417:27;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14833742	14834789	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000417:29;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14834790	14835012	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000417:30;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14834790	14835012	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000417:28;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14835013	14838083	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000417:30;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14838084	14838304	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000417:31;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14838084	14838304	.	+	2	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000417:29;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14838305	14840379	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000417:31;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14840380	14840570	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000417:32;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14840380	14840570	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000417:30;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14840571	14855633	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000417:32;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14855634	14855807	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000417:33;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14855634	14855807	.	+	1	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000417:31;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14855808	14859856	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000417:33;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14859857	14859998	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000417:34;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14859857	14859998	.	+	1	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000417:32;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14859999	14861809	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000417:34;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14861810	14862560	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000417:35;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14861810	14862560	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000417:33;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14862561	14862955	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000417:35;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14862956	14863079	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000417:36;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14862956	14863079	.	+	2	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000417:34;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14863080	14864185	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000417:36;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14864186	14864411	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000417:37;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14864186	14864411	.	+	1	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000417:35;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14864412	14865009	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000417:37;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14865010	14865139	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000417:38;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14865010	14865139	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000417:36;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14865140	14868278	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000417:38;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14868279	14868464	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000417:39;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14868279	14868464	.	+	2	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000417:37;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14868465	14868878	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000417:39;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14868879	14869099	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000417:40;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14868879	14869099	.	+	2	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000417:38;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14869100	14869184	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000417:40;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14869185	14869273	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000417:41;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14869185	14869273	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000417:39;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14869274	14878285	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000417:41;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14878286	14878442	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000417:42;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14878286	14878442	.	+	1	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000417:40;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14878443	14878578	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000417:42;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14878579	14878791	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000417:43;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14878579	14878791	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000417:41;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14878792	14879511	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000417:43;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14879512	14879607	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000417:44;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14879512	14879607	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000417:42;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14879608	14881224	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000417:44;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14881225	14882785	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000417:45;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14881225	14881362	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000417:43;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	14881360	14881362	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000417;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000417;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=stop_codon:HG03009_ch_T0000417;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	14731419	14882785	100	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_G0000164;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=HG03009_ch_T0000418;Name=USP9Y
HG03009_chrY	CAT	exon	14731419	14731506	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000418:0;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14731507	14736601	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000418:0;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14736602	14736752	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000418:1;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14736753	14742551	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000418:1;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14742552	14742700	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000418:2;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14742690	14742700	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000418:0;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	14742690	14742692	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=start_codon:HG03009_ch_T0000418;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14742701	14744069	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000418:2;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14744070	14744149	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000418:3;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14744070	14744149	.	+	1	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000418:1;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14744150	14747074	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000418:3;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14747075	14747187	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000418:4;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14747075	14747187	.	+	2	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000418:2;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14747188	14748536	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000418:4;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14748537	14748755	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000418:5;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14748537	14748755	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000418:3;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14748756	14757573	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000418:5;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14757574	14757689	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000418:6;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14757574	14757689	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000418:4;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14757690	14757959	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000418:6;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14757960	14758211	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000418:7;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14757960	14758211	.	+	1	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000418:5;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14758212	14758372	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000418:7;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14758373	14758511	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000418:8;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14758373	14758511	.	+	1	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000418:6;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14758512	14760118	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000418:8;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14760119	14760271	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000418:9;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14760119	14760271	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000418:7;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14760272	14761486	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000418:9;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14761487	14761591	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000418:10;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14761487	14761591	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000418:8;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14761592	14779153	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000418:10;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14779154	14779360	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000418:11;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14779154	14779360	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000418:9;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14779361	14780467	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000418:11;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14780468	14780604	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000418:12;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14780468	14780604	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000418:10;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14780605	14782445	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000418:12;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14782446	14782579	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000418:13;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14782446	14782579	.	+	1	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000418:11;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14782580	14793029	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000418:13;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14793030	14793117	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000418:14;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14793030	14793117	.	+	2	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000418:12;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14793118	14795544	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000418:14;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14795545	14795887	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000418:15;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14795545	14795887	.	+	1	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000418:13;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14795888	14797432	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000418:15;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14797433	14797528	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000418:16;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14797433	14797528	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000418:14;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14797529	14798610	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000418:16;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14798611	14798822	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000418:17;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14798611	14798822	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000418:15;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14798823	14799980	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000418:17;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14799981	14800221	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000418:18;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14799981	14800221	.	+	1	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000418:16;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14800222	14800567	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000418:18;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14800568	14800717	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000418:19;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14800568	14800717	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000418:17;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14800718	14801487	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000418:19;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14801488	14801608	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000418:20;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14801488	14801608	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000418:18;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14801609	14808164	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000418:20;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14808165	14808295	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000418:21;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14808165	14808295	.	+	2	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000418:19;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14808296	14808482	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000418:21;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14808483	14808761	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000418:22;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14808483	14808761	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000418:20;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14808762	14812367	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000418:22;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14812368	14812493	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000418:23;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14812368	14812493	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000418:21;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14812494	14813459	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000418:23;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14813460	14813585	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000418:24;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14813460	14813585	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000418:22;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14813586	14814992	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000418:24;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14814993	14815162	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000418:25;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14814993	14815162	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000418:23;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14815163	14832138	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000418:25;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14832139	14832247	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000418:26;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14832139	14832247	.	+	1	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000418:24;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14832248	14832631	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000418:26;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14832632	14832778	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000418:27;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14832632	14832778	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000418:25;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14832779	14833594	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000418:27;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14833595	14833741	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000418:28;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14833595	14833741	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000418:26;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14833742	14834789	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000418:28;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14834790	14835012	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000418:29;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14834790	14835012	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000418:27;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14835013	14838083	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000418:29;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14838084	14838304	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000418:30;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14838084	14838304	.	+	2	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000418:28;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14838305	14840379	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000418:30;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14840380	14840570	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000418:31;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14840380	14840570	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000418:29;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14840571	14855633	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000418:31;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14855634	14855807	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000418:32;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14855634	14855807	.	+	1	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000418:30;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14855808	14859856	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000418:32;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14859857	14859998	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000418:33;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14859857	14859998	.	+	1	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000418:31;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14859999	14861809	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000418:33;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14861810	14862560	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000418:34;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14861810	14862560	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000418:32;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14862561	14862955	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000418:34;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14862956	14863079	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000418:35;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14862956	14863079	.	+	2	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000418:33;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14863080	14864185	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000418:35;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14864186	14864411	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000418:36;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14864186	14864411	.	+	1	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000418:34;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14864412	14865009	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000418:36;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14865010	14865139	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000418:37;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14865010	14865139	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000418:35;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14865140	14868278	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000418:37;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14868279	14868464	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000418:38;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14868279	14868464	.	+	2	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000418:36;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14868465	14868878	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000418:38;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14868879	14869099	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000418:39;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14868879	14869099	.	+	2	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000418:37;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14869100	14869184	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000418:39;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14869185	14869273	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000418:40;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14869185	14869273	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000418:38;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14869274	14878285	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000418:40;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14878286	14878442	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000418:41;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14878286	14878442	.	+	1	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000418:39;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14878443	14878578	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000418:41;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14878579	14878791	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000418:42;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14878579	14878791	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000418:40;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14878792	14879511	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000418:42;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14879512	14879607	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000418:43;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14879512	14879607	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000418:41;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14879608	14881224	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03009_ch_T0000418:43;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14881225	14882785	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03009_ch_T0000418:44;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14881225	14881362	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03009_ch_T0000418:42;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	14881360	14881362	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000418;gene_id=HG03009_ch_G0000164;Parent=HG03009_ch_T0000418;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=stop_codon:HG03009_ch_T0000418;Name=USP9Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	14926819	14942429	.	+	.	source_gene_common_name=DDX3Y;source_gene=hg002_chrY_paternal_315;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;gene_id=HG03009_ch_G0000165;gene_biotype=protein_coding;gene_name=DDX3Y;gene_sources=liftoff,augTM,transMap;ID=HG03009_ch_G0000165;Name=DDX3Y
HG03009_chrY	CAT	transcript	14926819	14942429	1000	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000419;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_G0000165;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=HG03009_ch_T0000419;Name=DDX3Y
HG03009_chrY	CAT	exon	14926819	14926932	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000419;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000419:0;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14926933	14929487	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000419;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03009_ch_T0000419:0;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14929488	14929545	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000419;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000419:1;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14929546	14931310	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000419;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03009_ch_T0000419:1;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14931311	14931358	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000419;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000419:2;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14931359	14933789	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000419;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03009_ch_T0000419:2;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14933790	14933919	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000419;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000419:3;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14933920	14934677	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000419;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03009_ch_T0000419:3;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14934678	14935013	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000419;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000419:4;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14935014	14935668	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000419;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03009_ch_T0000419:4;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14935669	14935804	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000419;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000419:5;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14935805	14936514	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000419;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03009_ch_T0000419:5;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14936515	14937178	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000419;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000419:6;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14937179	14937580	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000419;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03009_ch_T0000419:6;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14937581	14937725	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000419;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000419:7;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14937726	14937833	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000419;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03009_ch_T0000419:7;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14937834	14937978	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000419;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000419:8;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14937979	14938211	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000419;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03009_ch_T0000419:8;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14938212	14938585	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000419;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000419:9;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14938586	14938857	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000419;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03009_ch_T0000419:9;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14938858	14939011	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000419;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000419:10;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14939012	14939353	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000419;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03009_ch_T0000419:10;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14939354	14939493	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000419;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000419:11;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14939494	14939993	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000419;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03009_ch_T0000419:11;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14939994	14942429	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000419;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000419:12;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	14926819	14942429	1000	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000420;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_G0000165;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=HG03009_ch_T0000420;Name=DDX3Y
HG03009_chrY	CAT	exon	14926819	14926932	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000420;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000420:0;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14926933	14929487	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000420;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03009_ch_T0000420:0;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14929488	14929545	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000420;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000420:1;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14929546	14931310	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000420;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03009_ch_T0000420:1;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14931311	14931358	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000420;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000420:2;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14931359	14933789	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000420;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03009_ch_T0000420:2;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14933790	14933919	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000420;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000420:3;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14933920	14934677	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000420;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03009_ch_T0000420:3;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14934678	14935013	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000420;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000420:4;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14935014	14935668	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000420;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03009_ch_T0000420:4;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14935669	14935804	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000420;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000420:5;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14935805	14936514	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000420;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03009_ch_T0000420:5;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14936515	14936600	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000420;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000420:6;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14936601	14936834	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000420;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03009_ch_T0000420:6;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14936835	14936933	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000420;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000420:7;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14936934	14937017	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000420;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03009_ch_T0000420:7;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14937018	14937178	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000420;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000420:8;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14937179	14937580	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000420;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03009_ch_T0000420:8;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14937581	14937725	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000420;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000420:9;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14937726	14937833	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000420;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03009_ch_T0000420:9;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14937834	14937978	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000420;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000420:10;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14937979	14938211	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000420;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03009_ch_T0000420:10;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14938212	14938585	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000420;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000420:11;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14938586	14938857	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000420;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03009_ch_T0000420:11;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14938858	14939011	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000420;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000420:12;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14939012	14939353	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000420;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03009_ch_T0000420:12;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14939354	14939493	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000420;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000420:13;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14939494	14939993	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000420;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03009_ch_T0000420:13;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14939994	14942429	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000420;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000420:14;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	14926819	14942429	1000	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000421;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_G0000165;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=HG03009_ch_T0000421;Name=DDX3Y
HG03009_chrY	CAT	exon	14926819	14926932	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000421;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000421;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000421:0;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14926933	14929487	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000421;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000421;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03009_ch_T0000421:0;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14929488	14929545	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000421;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000421;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000421:1;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14929546	14931310	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000421;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000421;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03009_ch_T0000421:1;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14931311	14931358	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000421;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000421;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000421:2;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14931359	14934677	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000421;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000421;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03009_ch_T0000421:2;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14934678	14935013	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000421;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000421;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000421:3;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14935014	14935668	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000421;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000421;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03009_ch_T0000421:3;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14935669	14935804	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000421;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000421;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000421:4;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14935805	14936514	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000421;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000421;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03009_ch_T0000421:4;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14936515	14937178	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000421;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000421;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000421:5;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14937179	14937580	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000421;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000421;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03009_ch_T0000421:5;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14937581	14937725	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000421;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000421;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000421:6;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14937726	14937833	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000421;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000421;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03009_ch_T0000421:6;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14937834	14937978	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000421;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000421;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000421:7;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14937979	14938211	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000421;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000421;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03009_ch_T0000421:7;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14938212	14938585	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000421;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000421;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000421:8;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14938586	14938857	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000421;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000421;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03009_ch_T0000421:8;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14938858	14939011	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000421;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000421;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000421:9;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14939012	14939353	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000421;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000421;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03009_ch_T0000421:9;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14939354	14939493	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000421;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000421;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000421:10;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14939494	14939993	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000421;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000421;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03009_ch_T0000421:10;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14939994	14942429	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000421;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000421;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000421:11;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	14926819	14942429	1000	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000422;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_G0000165;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=HG03009_ch_T0000422;Name=DDX3Y
HG03009_chrY	CAT	exon	14926819	14926932	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000422;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000422;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000422:0;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14926933	14929487	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000422;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000422;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03009_ch_T0000422:0;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14929488	14929545	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000422;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000422;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000422:1;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14929546	14931310	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000422;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000422;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03009_ch_T0000422:1;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14931311	14931358	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000422;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000422;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000422:2;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14931359	14933789	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000422;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000422;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03009_ch_T0000422:2;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14933790	14933919	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000422;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000422;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000422:3;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14933920	14934677	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000422;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000422;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03009_ch_T0000422:3;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14934678	14935013	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000422;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000422;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000422:4;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14935014	14935668	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000422;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000422;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03009_ch_T0000422:4;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14935669	14935804	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000422;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000422;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000422:5;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14935805	14936514	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000422;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000422;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03009_ch_T0000422:5;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14936515	14937178	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000422;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000422;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000422:6;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14937179	14937580	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000422;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000422;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03009_ch_T0000422:6;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14937581	14937725	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000422;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000422;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000422:7;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14937726	14937833	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000422;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000422;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03009_ch_T0000422:7;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14937834	14937978	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000422;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000422;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000422:8;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14937979	14938211	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000422;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000422;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03009_ch_T0000422:8;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14938212	14938585	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000422;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000422;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000422:9;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14938586	14938926	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000422;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000422;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03009_ch_T0000422:9;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14938927	14939011	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000422;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000422;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000422:10;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14939012	14939353	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000422;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000422;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03009_ch_T0000422:10;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14939354	14939493	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000422;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000422;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000422:11;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14939494	14939993	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000422;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000422;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03009_ch_T0000422:11;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14939994	14942429	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000422;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000422;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000422:12;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	14926819	14942429	1000	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000423;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_G0000165;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=HG03009_ch_T0000423;Name=DDX3Y
HG03009_chrY	CAT	exon	14926819	14926932	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000423;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000423;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000423:0;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14926933	14929487	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000423;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000423;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03009_ch_T0000423:0;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14929488	14929545	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000423;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000423;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000423:1;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14929546	14931310	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000423;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000423;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03009_ch_T0000423:1;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14931311	14931358	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000423;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000423;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000423:2;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14931359	14933789	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000423;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000423;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03009_ch_T0000423:2;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14933790	14933919	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000423;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000423;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000423:3;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14933920	14934677	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000423;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000423;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03009_ch_T0000423:3;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14934678	14935013	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000423;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000423;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000423:4;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14935014	14935668	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000423;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000423;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03009_ch_T0000423:4;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14935669	14935804	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000423;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000423;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000423:5;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14935805	14936514	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000423;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000423;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03009_ch_T0000423:5;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14936515	14936600	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000423;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000423;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000423:6;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14936601	14936834	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000423;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000423;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03009_ch_T0000423:6;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14936835	14936933	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000423;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000423;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000423:7;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14936934	14937034	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000423;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000423;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03009_ch_T0000423:7;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14937035	14937178	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000423;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000423;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000423:8;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14937179	14937580	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000423;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000423;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03009_ch_T0000423:8;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14937581	14937725	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000423;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000423;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000423:9;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14937726	14937833	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000423;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000423;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03009_ch_T0000423:9;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14937834	14937978	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000423;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000423;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000423:10;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14937979	14938211	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000423;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000423;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03009_ch_T0000423:10;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14938212	14938585	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000423;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000423;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000423:11;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14938586	14938857	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000423;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000423;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03009_ch_T0000423:11;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14938858	14939011	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000423;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000423;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000423:12;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14939012	14939353	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000423;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000423;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03009_ch_T0000423:12;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14939354	14939493	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000423;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000423;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000423:13;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14939494	14939993	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000423;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000423;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03009_ch_T0000423:13;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14939994	14942429	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000423;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000423;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000423:14;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	14927656	14942429	1000	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000424;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_G0000165;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=HG03009_ch_T0000424;Name=DDX3Y
HG03009_chrY	CAT	exon	14927656	14927766	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000424;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000424;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000424:0;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14927767	14929487	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000424;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000424;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03009_ch_T0000424:0;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14929488	14929545	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000424;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000424;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000424:1;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14929546	14931310	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000424;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000424;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03009_ch_T0000424:1;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14931311	14931358	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000424;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000424;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000424:2;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14931359	14933789	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000424;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000424;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03009_ch_T0000424:2;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14933790	14933919	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000424;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000424;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000424:3;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14933920	14934677	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000424;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000424;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03009_ch_T0000424:3;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14934678	14935013	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000424;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000424;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000424:4;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14935014	14935668	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000424;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000424;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03009_ch_T0000424:4;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14935669	14935804	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000424;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000424;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000424:5;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14935805	14936514	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000424;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000424;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03009_ch_T0000424:5;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14936515	14936600	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000424;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000424;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000424:6;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14936601	14936834	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000424;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000424;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03009_ch_T0000424:6;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14936835	14936933	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000424;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000424;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000424:7;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14936934	14937017	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000424;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000424;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03009_ch_T0000424:7;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14937018	14937178	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000424;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000424;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000424:8;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14937179	14937580	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000424;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000424;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03009_ch_T0000424:8;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14937581	14937725	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000424;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000424;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000424:9;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14937726	14937833	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000424;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000424;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03009_ch_T0000424:9;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14937834	14937978	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000424;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000424;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000424:10;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14937979	14938211	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000424;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000424;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03009_ch_T0000424:10;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14938212	14938585	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000424;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000424;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000424:11;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14938586	14938857	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000424;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000424;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03009_ch_T0000424:11;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14938858	14939011	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000424;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000424;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000424:12;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14939012	14939353	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000424;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000424;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03009_ch_T0000424:12;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14939354	14939493	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000424;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000424;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000424:13;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14939494	14939993	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000424;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000424;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03009_ch_T0000424:13;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14939994	14942429	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000424;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000424;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000424:14;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	14927656	14942429	1000	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13,hg002_chrY_paternal_315.14;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000425;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_G0000165;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=HG03009_ch_T0000425;Name=DDX3Y
HG03009_chrY	CAT	exon	14927656	14927766	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13,hg002_chrY_paternal_315.14;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000425;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000425;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000425:0;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14927767	14929487	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13,hg002_chrY_paternal_315.14;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000425;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000425;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03009_ch_T0000425:0;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14929488	14929545	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13,hg002_chrY_paternal_315.14;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000425;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000425;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000425:1;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14929546	14931310	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13,hg002_chrY_paternal_315.14;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000425;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000425;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03009_ch_T0000425:1;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14931311	14931358	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13,hg002_chrY_paternal_315.14;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000425;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000425;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000425:2;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14931359	14933789	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13,hg002_chrY_paternal_315.14;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000425;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000425;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03009_ch_T0000425:2;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14933790	14933919	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13,hg002_chrY_paternal_315.14;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000425;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000425;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000425:3;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14933920	14934677	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13,hg002_chrY_paternal_315.14;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000425;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000425;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03009_ch_T0000425:3;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14934678	14935013	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13,hg002_chrY_paternal_315.14;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000425;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000425;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000425:4;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14935014	14935668	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13,hg002_chrY_paternal_315.14;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000425;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000425;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03009_ch_T0000425:4;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14935669	14935804	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13,hg002_chrY_paternal_315.14;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000425;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000425;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000425:5;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14935805	14936514	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13,hg002_chrY_paternal_315.14;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000425;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000425;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03009_ch_T0000425:5;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14936515	14937178	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13,hg002_chrY_paternal_315.14;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000425;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000425;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000425:6;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14937179	14937580	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13,hg002_chrY_paternal_315.14;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000425;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000425;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03009_ch_T0000425:6;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14937581	14937725	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13,hg002_chrY_paternal_315.14;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000425;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000425;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000425:7;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14937726	14937833	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13,hg002_chrY_paternal_315.14;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000425;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000425;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03009_ch_T0000425:7;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14937834	14937978	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13,hg002_chrY_paternal_315.14;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000425;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000425;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000425:8;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14937979	14938211	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13,hg002_chrY_paternal_315.14;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000425;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000425;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03009_ch_T0000425:8;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14938212	14938585	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13,hg002_chrY_paternal_315.14;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000425;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000425;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000425:9;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14938586	14938857	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13,hg002_chrY_paternal_315.14;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000425;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000425;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03009_ch_T0000425:9;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14938858	14939011	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13,hg002_chrY_paternal_315.14;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000425;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000425;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000425:10;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14939012	14939353	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13,hg002_chrY_paternal_315.14;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000425;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000425;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03009_ch_T0000425:10;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14939354	14939493	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13,hg002_chrY_paternal_315.14;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000425;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000425;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000425:11;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14939494	14939993	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13,hg002_chrY_paternal_315.14;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000425;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000425;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03009_ch_T0000425:11;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14939994	14942429	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13,hg002_chrY_paternal_315.14;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000425;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000425;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000425:12;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	14929520	14942429	9960	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000426;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_G0000165;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=HG03009_ch_T0000426;Name=DDX3Y
HG03009_chrY	CAT	exon	14929520	14929545	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000426;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000426;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000426:0;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14929546	14931310	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000426;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000426;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=intron:HG03009_ch_T0000426:0;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14931311	14931358	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000426;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000426;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000426:1;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14931359	14934677	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000426;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000426;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=intron:HG03009_ch_T0000426:1;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14934678	14935013	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000426;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000426;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000426:2;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14935014	14935668	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000426;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000426;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=intron:HG03009_ch_T0000426:2;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14935669	14935804	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000426;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000426;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000426:3;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14935684	14935804	.	+	0	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000426;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000426;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=CDS:HG03009_ch_T0000426:0;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	14935684	14935686	.	+	0	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000426;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000426;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=start_codon:HG03009_ch_T0000426;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14935805	14936514	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000426;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000426;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=intron:HG03009_ch_T0000426:3;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14936515	14936600	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000426;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000426;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000426:4;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14936515	14936600	.	+	2	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000426;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000426;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=CDS:HG03009_ch_T0000426:1;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14936601	14936834	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000426;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000426;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=intron:HG03009_ch_T0000426:4;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14936835	14936933	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000426;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000426;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000426:5;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14936835	14936933	.	+	0	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000426;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000426;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=CDS:HG03009_ch_T0000426:2;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14936934	14937017	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000426;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000426;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=intron:HG03009_ch_T0000426:5;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14937018	14937178	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000426;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000426;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000426:6;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14937018	14937178	.	+	0	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000426;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000426;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=CDS:HG03009_ch_T0000426:3;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14937179	14937580	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000426;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000426;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=intron:HG03009_ch_T0000426:6;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14937581	14937725	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000426;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000426;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000426:7;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14937581	14937725	.	+	1	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000426;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000426;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=CDS:HG03009_ch_T0000426:4;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14937726	14937833	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000426;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000426;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=intron:HG03009_ch_T0000426:7;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14937834	14937978	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000426;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000426;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000426:8;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14937834	14937978	.	+	0	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000426;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000426;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=CDS:HG03009_ch_T0000426:5;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14937979	14938211	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000426;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000426;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=intron:HG03009_ch_T0000426:8;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14938212	14938393	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000426;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000426;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000426:9;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14938212	14938393	.	+	2	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000426;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000426;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=CDS:HG03009_ch_T0000426:6;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14938394	14938467	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000426;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000426;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=intron:HG03009_ch_T0000426:9;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14938468	14938585	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000426;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000426;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000426:10;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14938468	14938585	.	+	0	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000426;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000426;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=CDS:HG03009_ch_T0000426:7;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14938586	14938857	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000426;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000426;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=intron:HG03009_ch_T0000426:10;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14938858	14939011	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000426;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000426;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000426:11;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14938858	14939011	.	+	2	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000426;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000426;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=CDS:HG03009_ch_T0000426:8;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14939012	14939353	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000426;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000426;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=intron:HG03009_ch_T0000426:11;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14939354	14939493	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000426;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000426;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000426:12;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14939354	14939493	.	+	1	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000426;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000426;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=CDS:HG03009_ch_T0000426:9;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	14939494	14939993	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000426;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000426;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=intron:HG03009_ch_T0000426:12;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	14939994	14942429	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000426;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000426;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:HG03009_ch_T0000426:13;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	14939994	14940073	.	+	2	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000426;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000426;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=CDS:HG03009_ch_T0000426:10;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	14940071	14940073	.	+	0	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000426;gene_id=HG03009_ch_G0000165;Parent=HG03009_ch_T0000426;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=stop_codon:HG03009_ch_T0000426;Name=DDX3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	15133273	15147589	.	+	.	source_gene_common_name=LOC112268312;source_gene=hg002_chrY_paternal_318;alternative_source_transcripts=hg002_chrY_paternal_318.1;gene_id=HG03009_ch_G0000166;gene_biotype=lncRNA;gene_name=LOC112268312;gene_sources=transMap;ID=HG03009_ch_G0000166;Name=LOC112268312
HG03009_chrY	CAT	transcript	15133273	15140856	1000	+	.	source_transcript=hg002_chrY_paternal_318.1;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.1;transcript_score=291.867;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.1;transcript_id=HG03009_ch_T0000427;gene_id=HG03009_ch_G0000166;Parent=HG03009_ch_G0000166;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=HG03009_ch_T0000427;Name=LOC112268312
HG03009_chrY	CAT	exon	15133273	15133361	.	+	.	source_transcript=hg002_chrY_paternal_318.1;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.1;transcript_score=291.867;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.1;transcript_id=HG03009_ch_T0000427;gene_id=HG03009_ch_G0000166;Parent=HG03009_ch_T0000427;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:HG03009_ch_T0000427:0;Name=LOC112268312;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15133362	15133547	.	+	.	source_transcript=hg002_chrY_paternal_318.1;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.1;transcript_score=291.867;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.1;transcript_id=HG03009_ch_T0000427;gene_id=HG03009_ch_G0000166;Parent=HG03009_ch_T0000427;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=intron:HG03009_ch_T0000427:0;Name=LOC112268312;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15133548	15133710	.	+	.	source_transcript=hg002_chrY_paternal_318.1;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.1;transcript_score=291.867;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.1;transcript_id=HG03009_ch_T0000427;gene_id=HG03009_ch_G0000166;Parent=HG03009_ch_T0000427;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:HG03009_ch_T0000427:1;Name=LOC112268312;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15133711	15139657	.	+	.	source_transcript=hg002_chrY_paternal_318.1;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.1;transcript_score=291.867;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.1;transcript_id=HG03009_ch_T0000427;gene_id=HG03009_ch_G0000166;Parent=HG03009_ch_T0000427;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=intron:HG03009_ch_T0000427:1;Name=LOC112268312;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15139658	15140856	.	+	.	source_transcript=hg002_chrY_paternal_318.1;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.1;transcript_score=291.867;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.1;transcript_id=HG03009_ch_T0000427;gene_id=HG03009_ch_G0000166;Parent=HG03009_ch_T0000427;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:HG03009_ch_T0000427:2;Name=LOC112268312;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	15133273	15147589	1000	+	.	source_transcript=hg002_chrY_paternal_318.2;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.2;transcript_score=298.543;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.2;transcript_id=HG03009_ch_T0000428;gene_id=HG03009_ch_G0000166;Parent=HG03009_ch_G0000166;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=HG03009_ch_T0000428;Name=LOC112268312
HG03009_chrY	CAT	exon	15133273	15133361	.	+	.	source_transcript=hg002_chrY_paternal_318.2;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.2;transcript_score=298.543;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.2;transcript_id=HG03009_ch_T0000428;gene_id=HG03009_ch_G0000166;Parent=HG03009_ch_T0000428;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:HG03009_ch_T0000428:0;Name=LOC112268312;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15133362	15133547	.	+	.	source_transcript=hg002_chrY_paternal_318.2;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.2;transcript_score=298.543;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.2;transcript_id=HG03009_ch_T0000428;gene_id=HG03009_ch_G0000166;Parent=HG03009_ch_T0000428;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=intron:HG03009_ch_T0000428:0;Name=LOC112268312;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15133548	15133710	.	+	.	source_transcript=hg002_chrY_paternal_318.2;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.2;transcript_score=298.543;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.2;transcript_id=HG03009_ch_T0000428;gene_id=HG03009_ch_G0000166;Parent=HG03009_ch_T0000428;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:HG03009_ch_T0000428:1;Name=LOC112268312;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15133711	15139657	.	+	.	source_transcript=hg002_chrY_paternal_318.2;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.2;transcript_score=298.543;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.2;transcript_id=HG03009_ch_T0000428;gene_id=HG03009_ch_G0000166;Parent=HG03009_ch_T0000428;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=intron:HG03009_ch_T0000428:1;Name=LOC112268312;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15139658	15139794	.	+	.	source_transcript=hg002_chrY_paternal_318.2;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.2;transcript_score=298.543;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.2;transcript_id=HG03009_ch_T0000428;gene_id=HG03009_ch_G0000166;Parent=HG03009_ch_T0000428;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:HG03009_ch_T0000428:2;Name=LOC112268312;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15139795	15147222	.	+	.	source_transcript=hg002_chrY_paternal_318.2;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.2;transcript_score=298.543;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.2;transcript_id=HG03009_ch_T0000428;gene_id=HG03009_ch_G0000166;Parent=HG03009_ch_T0000428;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=intron:HG03009_ch_T0000428:2;Name=LOC112268312;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15147223	15147589	.	+	.	source_transcript=hg002_chrY_paternal_318.2;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.2;transcript_score=298.543;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.2;transcript_id=HG03009_ch_T0000428;gene_id=HG03009_ch_G0000166;Parent=HG03009_ch_T0000428;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:HG03009_ch_T0000428:3;Name=LOC112268312;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	15133395	15140856	1000	+	.	source_transcript=hg002_chrY_paternal_318.3;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.3;transcript_score=291.456;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.3;transcript_id=HG03009_ch_T0000429;gene_id=HG03009_ch_G0000166;Parent=HG03009_ch_G0000166;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=HG03009_ch_T0000429;Name=LOC112268312
HG03009_chrY	CAT	exon	15133395	15133413	.	+	.	source_transcript=hg002_chrY_paternal_318.3;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.3;transcript_score=291.456;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.3;transcript_id=HG03009_ch_T0000429;gene_id=HG03009_ch_G0000166;Parent=HG03009_ch_T0000429;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:HG03009_ch_T0000429:0;Name=LOC112268312;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15133414	15133547	.	+	.	source_transcript=hg002_chrY_paternal_318.3;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.3;transcript_score=291.456;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.3;transcript_id=HG03009_ch_T0000429;gene_id=HG03009_ch_G0000166;Parent=HG03009_ch_T0000429;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=intron:HG03009_ch_T0000429:0;Name=LOC112268312;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15133548	15133710	.	+	.	source_transcript=hg002_chrY_paternal_318.3;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.3;transcript_score=291.456;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.3;transcript_id=HG03009_ch_T0000429;gene_id=HG03009_ch_G0000166;Parent=HG03009_ch_T0000429;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:HG03009_ch_T0000429:1;Name=LOC112268312;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15133711	15139657	.	+	.	source_transcript=hg002_chrY_paternal_318.3;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.3;transcript_score=291.456;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.3;transcript_id=HG03009_ch_T0000429;gene_id=HG03009_ch_G0000166;Parent=HG03009_ch_T0000429;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=intron:HG03009_ch_T0000429:1;Name=LOC112268312;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15139658	15140856	.	+	.	source_transcript=hg002_chrY_paternal_318.3;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.3;transcript_score=291.456;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.3;transcript_id=HG03009_ch_T0000429;gene_id=HG03009_ch_G0000166;Parent=HG03009_ch_T0000429;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:HG03009_ch_T0000429:2;Name=LOC112268312;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	15255800	15502562	.	-	.	source_gene_common_name=UTY;source_gene=hg002_chrY_paternal_321;alternative_source_transcripts=hg002_chrY_paternal_321.4;gene_id=HG03009_ch_G0000167;gene_biotype=protein_coding;gene_name=UTY;gene_sources=liftoff,augTM,transMap;ID=HG03009_ch_G0000167;Name=UTY
HG03009_chrY	CAT	transcript	15255800	15501925	1000	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000430;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_G0000167;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03009_ch_T0000430;Name=UTY
HG03009_chrY	CAT	exon	15255800	15256731	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000430;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000430:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15256732	15272906	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000430;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000430:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15272907	15273092	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000430;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000430:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15273093	15282182	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000430;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000430:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15282183	15282309	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000430;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000430:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15282310	15319611	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000430;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000430:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15319612	15319753	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000430;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000430:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15319754	15320861	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000430;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000430:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15320862	15321049	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000430;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000430:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15321050	15324781	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000430;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000430:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15324782	15324896	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000430;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000430:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15324897	15327303	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000430;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000430:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327304	15327452	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000430;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000430:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15327453	15327942	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000430;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000430:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327943	15328155	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000430;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000430:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15328156	15345455	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000430;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000430:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15345456	15345661	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000430;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000430:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15345662	15346501	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000430;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000430:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15346502	15346607	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000430;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000430:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15346608	15348121	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000430;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000430:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15348122	15348251	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000430;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000430:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15348252	15376903	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000430;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000430:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15376904	15377299	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000430;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000430:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377300	15377823	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000430;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000430:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15377824	15377919	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000430;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000430:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377920	15379777	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000430;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000430:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15379778	15379870	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000430;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000430:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15379871	15380364	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000430;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000430:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15380365	15380520	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000430;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000430:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15380521	15381667	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000430;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000430:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15381668	15381887	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000430;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000430:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15381888	15382330	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000430;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000430:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15382331	15382429	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000430;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000430:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15382430	15388167	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000430;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000430:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15388168	15388294	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000430;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000430:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15388295	15391156	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000430;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000430:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15391157	15391250	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000430;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000430:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15391251	15415763	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000430;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000430:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15415764	15415798	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000430;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000430:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15415799	15418822	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000430;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000430:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15418823	15418877	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000430;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000430:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15418878	15432897	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000430;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000430:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15432898	15433018	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000430;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000430:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15433019	15436639	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000430;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000430:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15436640	15436698	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000430;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000430:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15436699	15470908	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000430;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000430:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15470909	15470958	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000430;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000430:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15470959	15492012	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000430;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000430:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15492013	15492121	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000430;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000430:24;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15492122	15501145	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000430;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000430:24;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501146	15501209	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000430;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000430:25;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15501210	15501405	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000430;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000430:25;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501406	15501925	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000430;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000430:26;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	15270284	15502562	1000	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000431;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_G0000167;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03009_ch_T0000431;Name=UTY
HG03009_chrY	CAT	exon	15270284	15271787	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000431;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000431:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15271788	15272921	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000431;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000431:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15272922	15273092	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000431;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000431:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15273093	15282182	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000431;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000431:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15282183	15282309	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000431;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000431:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15282310	15319611	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000431;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000431:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15319612	15319753	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000431;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000431:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15319754	15320861	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000431;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000431:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15320862	15321049	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000431;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000431:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15321050	15324781	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000431;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000431:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15324782	15324896	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000431;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000431:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15324897	15327303	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000431;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000431:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327304	15327452	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000431;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000431:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15327453	15327942	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000431;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000431:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327943	15328155	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000431;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000431:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15328156	15345455	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000431;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000431:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15345456	15345661	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000431;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000431:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15345662	15346501	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000431;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000431:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15346502	15346607	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000431;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000431:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15346608	15348121	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000431;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000431:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15348122	15348251	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000431;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000431:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15348252	15376903	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000431;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000431:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15376904	15377299	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000431;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000431:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377300	15377823	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000431;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000431:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15377824	15377919	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000431;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000431:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377920	15379777	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000431;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000431:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15379778	15379870	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000431;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000431:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15379871	15381667	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000431;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000431:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15381668	15381887	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000431;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000431:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15381888	15382330	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000431;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000431:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15382331	15382429	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000431;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000431:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15382430	15388167	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000431;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000431:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15388168	15388294	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000431;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000431:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15388295	15391156	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000431;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000431:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15391157	15391250	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000431;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000431:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15391251	15415763	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000431;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000431:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15415764	15415798	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000431;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000431:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15415799	15418822	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000431;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000431:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15418823	15418877	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000431;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000431:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15418878	15432897	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000431;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000431:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15432898	15433018	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000431;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000431:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15433019	15436639	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000431;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000431:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15436640	15436698	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000431;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000431:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15436699	15470908	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000431;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000431:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15470909	15470958	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000431;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000431:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15470959	15492012	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000431;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000431:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15492013	15492121	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000431;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000431:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15492122	15501145	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000431;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000431:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501146	15501209	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000431;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000431:24;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15501210	15501405	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000431;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000431:24;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501406	15502562	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000431;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000431:25;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	15270284	15502562	1000	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000432;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_G0000167;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03009_ch_T0000432;Name=UTY
HG03009_chrY	CAT	exon	15270284	15271787	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000432;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000432:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15271788	15272921	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000432;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000432:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15272922	15273092	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000432;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000432:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15273093	15282182	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000432;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000432:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15282183	15282309	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000432;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000432:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15282310	15319611	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000432;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000432:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15319612	15319753	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000432;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000432:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15319754	15320861	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000432;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000432:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15320862	15321049	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000432;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000432:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15321050	15324781	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000432;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000432:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15324782	15324896	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000432;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000432:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15324897	15327303	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000432;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000432:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327304	15327452	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000432;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000432:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15327453	15327942	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000432;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000432:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327943	15328155	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000432;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000432:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15328156	15345455	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000432;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000432:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15345456	15345661	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000432;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000432:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15345662	15346501	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000432;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000432:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15346502	15346607	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000432;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000432:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15346608	15348121	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000432;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000432:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15348122	15348251	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000432;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000432:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15348252	15357463	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000432;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000432:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15357464	15358236	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000432;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000432:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15358237	15376903	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000432;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000432:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15376904	15377299	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000432;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000432:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377300	15377823	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000432;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000432:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15377824	15377919	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000432;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000432:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377920	15379777	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000432;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000432:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15379778	15379870	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000432;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000432:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15379871	15381667	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000432;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000432:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15381668	15381887	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000432;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000432:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15381888	15382330	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000432;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000432:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15382331	15382429	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000432;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000432:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15382430	15388167	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000432;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000432:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15388168	15388294	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000432;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000432:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15388295	15391156	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000432;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000432:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15391157	15391250	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000432;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000432:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15391251	15415763	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000432;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000432:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15415764	15415798	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000432;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000432:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15415799	15418822	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000432;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000432:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15418823	15418877	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000432;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000432:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15418878	15425687	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000432;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000432:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15425688	15425793	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000432;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000432:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15425794	15432897	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000432;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000432:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15432898	15433018	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000432;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000432:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15433019	15436639	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000432;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000432:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15436640	15436698	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000432;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000432:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15436699	15470908	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000432;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000432:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15470909	15470958	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000432;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000432:24;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15470959	15492012	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000432;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000432:24;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15492013	15492121	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000432;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000432:25;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15492122	15501145	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000432;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000432:25;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501146	15501209	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000432;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000432:26;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15501210	15501405	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000432;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000432:26;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501406	15502562	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000432;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000432:27;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	15270284	15502562	1000	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000433;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_G0000167;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03009_ch_T0000433;Name=UTY
HG03009_chrY	CAT	exon	15270284	15271787	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000433;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000433:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15271788	15272921	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000433;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000433:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15272922	15273092	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000433;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000433:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15273093	15282182	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000433;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000433:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15282183	15282309	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000433;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000433:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15282310	15319611	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000433;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000433:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15319612	15319753	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000433;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000433:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15319754	15320861	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000433;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000433:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15320862	15321049	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000433;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000433:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15321050	15324781	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000433;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000433:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15324782	15324896	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000433;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000433:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15324897	15327303	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000433;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000433:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327304	15327452	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000433;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000433:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15327453	15327557	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000433;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000433:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327558	15327625	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000433;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000433:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15327626	15327942	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000433;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000433:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327943	15328155	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000433;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000433:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15328156	15345455	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000433;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000433:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15345456	15345661	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000433;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000433:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15345662	15346501	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000433;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000433:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15346502	15346607	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000433;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000433:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15346608	15348121	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000433;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000433:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15348122	15348251	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000433;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000433:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15348252	15357463	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000433;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000433:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15357464	15358236	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000433;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000433:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15358237	15376903	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000433;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000433:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15376904	15377299	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000433;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000433:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377300	15377823	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000433;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000433:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15377824	15377919	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000433;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000433:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377920	15379777	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000433;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000433:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15379778	15379870	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000433;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000433:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15379871	15380988	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000433;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000433:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15380989	15381123	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000433;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000433:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15381124	15381667	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000433;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000433:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15381668	15381887	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000433;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000433:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15381888	15382330	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000433;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000433:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15382331	15382429	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000433;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000433:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15382430	15388167	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000433;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000433:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15388168	15388294	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000433;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000433:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15388295	15391161	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000433;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000433:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15391162	15391250	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000433;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000433:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15391251	15415763	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000433;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000433:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15415764	15415798	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000433;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000433:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15415799	15418822	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000433;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000433:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15418823	15418877	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000433;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000433:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15418878	15425687	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000433;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000433:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15425688	15425793	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000433;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000433:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15425794	15432897	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000433;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000433:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15432898	15433018	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000433;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000433:24;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15433019	15436639	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000433;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000433:24;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15436640	15436698	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000433;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000433:25;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15436699	15470908	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000433;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000433:25;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15470909	15470958	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000433;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000433:26;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15470959	15492012	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000433;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000433:26;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15492013	15492121	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000433;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000433:27;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15492122	15501145	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000433;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000433:27;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501146	15501209	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000433;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000433:28;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15501210	15501405	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000433;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000433:28;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501406	15502562	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000433;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000433:29;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	15270284	15502562	1000	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000434;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_G0000167;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03009_ch_T0000434;Name=UTY
HG03009_chrY	CAT	exon	15270284	15271787	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000434;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000434:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15271788	15272906	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000434;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000434:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15272907	15273092	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000434;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000434:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15273093	15282182	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000434;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000434:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15282183	15282309	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000434;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000434:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15282310	15319611	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000434;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000434:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15319612	15319753	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000434;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000434:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15319754	15320861	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000434;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000434:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15320862	15321049	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000434;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000434:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15321050	15324781	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000434;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000434:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15324782	15324896	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000434;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000434:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15324897	15327303	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000434;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000434:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327304	15327452	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000434;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000434:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15327453	15327942	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000434;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000434:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327943	15328155	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000434;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000434:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15328156	15345455	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000434;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000434:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15345456	15345661	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000434;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000434:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15345662	15346501	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000434;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000434:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15346502	15346607	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000434;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000434:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15346608	15348121	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000434;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000434:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15348122	15348251	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000434;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000434:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15348252	15356118	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000434;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000434:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15356119	15356241	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000434;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000434:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15356242	15357463	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000434;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000434:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15357464	15358236	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000434;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000434:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15358237	15376903	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000434;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000434:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15376904	15377299	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000434;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000434:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377300	15377823	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000434;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000434:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15377824	15377919	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000434;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000434:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377920	15379777	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000434;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000434:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15379778	15379870	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000434;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000434:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15379871	15381667	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000434;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000434:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15381668	15381887	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000434;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000434:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15381888	15382330	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000434;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000434:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15382331	15382429	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000434;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000434:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15382430	15388167	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000434;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000434:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15388168	15388294	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000434;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000434:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15388295	15391156	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000434;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000434:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15391157	15391250	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000434;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000434:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15391251	15415763	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000434;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000434:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15415764	15415798	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000434;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000434:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15415799	15418822	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000434;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000434:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15418823	15418877	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000434;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000434:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15418878	15432897	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000434;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000434:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15432898	15433018	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000434;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000434:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15433019	15436639	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000434;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000434:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15436640	15436698	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000434;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000434:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15436699	15470908	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000434;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000434:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15470909	15470958	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000434;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000434:24;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15470959	15492012	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000434;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000434:24;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15492013	15492121	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000434;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000434:25;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15492122	15501145	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000434;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000434:25;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501146	15501209	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000434;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000434:26;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15501210	15501405	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000434;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000434:26;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501406	15502562	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000434;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000434:27;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	15270284	15502562	1000	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000435;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_G0000167;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03009_ch_T0000435;Name=UTY
HG03009_chrY	CAT	exon	15270284	15271787	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000435;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000435:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15271788	15272921	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000435;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000435:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15272922	15273092	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000435;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000435:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15273093	15282182	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000435;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000435:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15282183	15282309	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000435;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000435:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15282310	15319611	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000435;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000435:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15319612	15319753	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000435;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000435:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15319754	15320861	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000435;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000435:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15320862	15321049	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000435;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000435:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15321050	15324781	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000435;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000435:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15324782	15324896	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000435;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000435:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15324897	15327303	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000435;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000435:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327304	15327452	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000435;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000435:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15327453	15327942	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000435;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000435:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327943	15328155	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000435;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000435:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15328156	15345455	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000435;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000435:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15345456	15345661	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000435;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000435:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15345662	15346501	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000435;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000435:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15346502	15346607	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000435;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000435:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15346608	15348121	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000435;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000435:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15348122	15348251	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000435;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000435:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15348252	15357463	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000435;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000435:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15357464	15358236	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000435;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000435:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15358237	15377275	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000435;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000435:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15377276	15377429	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000435;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000435:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377430	15377538	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000435;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000435:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15377539	15377604	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000435;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000435:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377605	15377823	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000435;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000435:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15377824	15377919	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000435;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000435:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377920	15379777	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000435;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000435:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15379778	15379870	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000435;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000435:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15379871	15380988	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000435;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000435:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15380989	15381123	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000435;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000435:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15381124	15381667	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000435;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000435:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15381668	15381887	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000435;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000435:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15381888	15382330	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000435;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000435:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15382331	15382429	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000435;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000435:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15382430	15388167	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000435;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000435:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15388168	15388294	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000435;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000435:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15388295	15391156	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000435;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000435:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15391157	15391250	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000435;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000435:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15391251	15418822	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000435;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000435:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15418823	15418877	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000435;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000435:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15418878	15432897	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000435;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000435:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15432898	15433018	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000435;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000435:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15433019	15436639	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000435;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000435:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15436640	15436698	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000435;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000435:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15436699	15470908	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000435;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000435:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15470909	15470958	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000435;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000435:24;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15470959	15492012	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000435;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000435:24;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15492013	15492121	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000435;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000435:25;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15492122	15501145	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000435;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000435:25;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501146	15501209	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000435;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000435:26;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15501210	15501405	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000435;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000435:26;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501406	15502562	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000435;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000435:27;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	15270284	15502562	1000	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000436;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_G0000167;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03009_ch_T0000436;Name=UTY
HG03009_chrY	CAT	exon	15270284	15271787	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000436;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000436:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15271788	15282182	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000436;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000436:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15282183	15282309	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000436;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000436:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15282310	15319611	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000436;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000436:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15319612	15319753	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000436;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000436:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15319754	15320861	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000436;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000436:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15320862	15321049	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000436;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000436:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15321050	15324781	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000436;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000436:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15324782	15324896	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000436;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000436:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15324897	15327303	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000436;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000436:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327304	15327452	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000436;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000436:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15327453	15327942	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000436;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000436:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327943	15328155	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000436;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000436:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15328156	15345455	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000436;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000436:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15345456	15345661	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000436;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000436:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15345662	15346501	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000436;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000436:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15346502	15346607	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000436;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000436:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15346608	15348121	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000436;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000436:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15348122	15348251	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000436;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000436:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15348252	15357463	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000436;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000436:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15357464	15357701	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000436;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000436:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15357702	15376903	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000436;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000436:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15376904	15377299	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000436;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000436:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377300	15377823	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000436;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000436:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15377824	15377919	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000436;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000436:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377920	15379777	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000436;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000436:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15379778	15379870	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000436;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000436:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15379871	15380988	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000436;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000436:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15380989	15381123	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000436;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000436:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15381124	15381667	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000436;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000436:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15381668	15381887	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000436;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000436:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15381888	15382330	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000436;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000436:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15382331	15382429	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000436;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000436:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15382430	15388167	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000436;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000436:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15388168	15388294	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000436;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000436:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15388295	15391156	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000436;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000436:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15391157	15391250	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000436;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000436:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15391251	15415763	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000436;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000436:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15415764	15415798	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000436;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000436:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15415799	15418822	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000436;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000436:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15418823	15418877	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000436;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000436:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15418878	15432897	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000436;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000436:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15432898	15433018	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000436;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000436:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15433019	15436639	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000436;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000436:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15436640	15436698	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000436;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000436:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15436699	15470908	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000436;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000436:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15470909	15470958	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000436;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000436:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15470959	15492012	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000436;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000436:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15492013	15492121	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000436;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000436:24;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15492122	15501145	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000436;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000436:24;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501146	15501209	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000436;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000436:25;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15501210	15501405	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000436;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000436:25;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501406	15502562	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000436;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000436:26;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	15270284	15502562	1000	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000437;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_G0000167;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03009_ch_T0000437;Name=UTY
HG03009_chrY	CAT	exon	15270284	15271787	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000437;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000437:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15271788	15272921	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000437;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000437:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15272922	15273092	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000437;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000437:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15273093	15282182	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000437;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000437:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15282183	15282309	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000437;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000437:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15282310	15319611	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000437;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000437:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15319612	15319753	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000437;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000437:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15319754	15320861	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000437;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000437:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15320862	15321049	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000437;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000437:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15321050	15324781	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000437;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000437:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15324782	15324896	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000437;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000437:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15324897	15327303	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000437;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000437:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327304	15327452	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000437;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000437:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15327453	15327942	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000437;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000437:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327943	15328155	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000437;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000437:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15328156	15345455	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000437;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000437:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15345456	15345661	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000437;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000437:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15345662	15346501	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000437;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000437:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15346502	15346607	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000437;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000437:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15346608	15348121	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000437;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000437:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15348122	15348251	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000437;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000437:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15348252	15357463	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000437;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000437:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15357464	15358236	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000437;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000437:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15358237	15376903	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000437;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000437:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15376904	15377299	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000437;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000437:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377300	15377823	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000437;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000437:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15377824	15377919	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000437;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000437:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377920	15379777	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000437;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000437:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15379778	15379870	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000437;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000437:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15379871	15381667	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000437;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000437:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15381668	15381887	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000437;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000437:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15381888	15382330	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000437;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000437:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15382331	15382429	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000437;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000437:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15382430	15388167	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000437;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000437:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15388168	15388294	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000437;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000437:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15388295	15391156	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000437;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000437:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15391157	15391250	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000437;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000437:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15391251	15418822	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000437;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000437:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15418823	15418877	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000437;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000437:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15418878	15432897	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000437;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000437:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15432898	15433018	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000437;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000437:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15433019	15436639	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000437;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000437:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15436640	15436698	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000437;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000437:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15436699	15470908	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000437;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000437:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15470909	15470958	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000437;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000437:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15470959	15492012	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000437;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000437:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15492013	15492121	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000437;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000437:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15492122	15501145	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000437;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000437:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501146	15501209	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000437;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000437:24;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15501210	15501405	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000437;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000437:24;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501406	15502562	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000437;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000437:25;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	15270284	15502562	1000	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000438;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_G0000167;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03009_ch_T0000438;Name=UTY
HG03009_chrY	CAT	exon	15270284	15271787	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000438;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000438:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15271788	15272921	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000438;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000438:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15272922	15273092	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000438;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000438:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15273093	15282182	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000438;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000438:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15282183	15282309	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000438;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000438:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15282310	15319611	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000438;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000438:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15319612	15319753	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000438;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000438:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15319754	15320861	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000438;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000438:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15320862	15321049	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000438;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000438:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15321050	15324781	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000438;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000438:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15324782	15324896	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000438;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000438:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15324897	15327303	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000438;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000438:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327304	15327452	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000438;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000438:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15327453	15327942	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000438;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000438:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327943	15328155	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000438;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000438:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15328156	15345455	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000438;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000438:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15345456	15345661	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000438;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000438:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15345662	15346501	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000438;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000438:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15346502	15346607	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000438;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000438:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15346608	15348121	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000438;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000438:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15348122	15348251	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000438;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000438:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15348252	15357463	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000438;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000438:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15357464	15358236	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000438;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000438:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15358237	15376903	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000438;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000438:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15376904	15377299	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000438;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000438:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377300	15377823	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000438;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000438:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15377824	15377919	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000438;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000438:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377920	15379777	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000438;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000438:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15379778	15379870	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000438;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000438:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15379871	15381667	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000438;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000438:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15381668	15381887	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000438;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000438:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15381888	15382330	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000438;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000438:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15382331	15382429	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000438;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000438:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15382430	15388167	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000438;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000438:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15388168	15388294	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000438;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000438:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15388295	15391156	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000438;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000438:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15391157	15391250	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000438;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000438:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15391251	15415763	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000438;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000438:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15415764	15415798	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000438;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000438:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15415799	15418822	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000438;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000438:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15418823	15418877	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000438;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000438:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15418878	15432897	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000438;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000438:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15432898	15433018	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000438;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000438:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15433019	15436639	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000438;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000438:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15436640	15436698	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000438;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000438:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15436699	15470908	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000438;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000438:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15470909	15470958	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000438;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000438:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15470959	15492012	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000438;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000438:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15492013	15492121	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000438;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000438:24;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15492122	15497794	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000438;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000438:24;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15497795	15497917	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000438;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000438:25;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15497918	15501145	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000438;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000438:25;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501146	15501209	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000438;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000438:26;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15501210	15501405	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000438;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000438:26;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501406	15502562	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000438;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000438:27;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	15270284	15502562	1000	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000439;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_G0000167;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03009_ch_T0000439;Name=UTY
HG03009_chrY	CAT	exon	15270284	15271787	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000439;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000439:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15271788	15272921	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000439;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000439:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15272922	15273092	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000439;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000439:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15273093	15282182	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000439;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000439:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15282183	15282309	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000439;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000439:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15282310	15319611	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000439;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000439:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15319612	15319753	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000439;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000439:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15319754	15320861	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000439;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000439:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15320862	15321049	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000439;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000439:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15321050	15324781	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000439;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000439:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15324782	15324896	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000439;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000439:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15324897	15327303	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000439;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000439:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327304	15327452	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000439;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000439:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15327453	15327942	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000439;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000439:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327943	15328155	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000439;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000439:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15328156	15345455	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000439;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000439:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15345456	15345661	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000439;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000439:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15345662	15346501	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000439;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000439:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15346502	15346607	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000439;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000439:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15346608	15348121	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000439;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000439:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15348122	15348251	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000439;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000439:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15348252	15357463	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000439;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000439:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15357464	15357701	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000439;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000439:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15357702	15377275	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000439;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000439:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15377276	15377299	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000439;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000439:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377300	15377823	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000439;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000439:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15377824	15377919	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000439;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000439:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377920	15379777	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000439;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000439:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15379778	15379870	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000439;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000439:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15379871	15381667	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000439;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000439:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15381668	15381887	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000439;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000439:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15381888	15382330	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000439;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000439:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15382331	15382429	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000439;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000439:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15382430	15388167	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000439;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000439:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15388168	15388294	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000439;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000439:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15388295	15391156	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000439;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000439:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15391157	15391250	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000439;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000439:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15391251	15415763	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000439;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000439:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15415764	15415798	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000439;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000439:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15415799	15418822	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000439;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000439:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15418823	15418877	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000439;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000439:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15418878	15432897	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000439;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000439:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15432898	15433018	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000439;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000439:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15433019	15436639	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000439;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000439:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15436640	15436698	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000439;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000439:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15436699	15470908	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000439;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000439:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15470909	15470958	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000439;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000439:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15470959	15492012	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000439;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000439:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15492013	15492121	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000439;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000439:24;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15492122	15501145	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000439;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000439:24;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501146	15501209	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000439;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000439:25;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15501210	15501405	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000439;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000439:25;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501406	15502562	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000439;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000439:26;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	15270284	15502562	1000	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000440;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_G0000167;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03009_ch_T0000440;Name=UTY
HG03009_chrY	CAT	exon	15270284	15271787	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000440;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000440:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15271788	15272921	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000440;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000440:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15272922	15273092	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000440;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000440:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15273093	15282182	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000440;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000440:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15282183	15282309	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000440;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000440:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15282310	15300145	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000440;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000440:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15300146	15300250	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000440;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000440:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15300251	15319611	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000440;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000440:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15319612	15319753	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000440;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000440:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15319754	15320861	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000440;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000440:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15320862	15321049	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000440;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000440:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15321050	15324781	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000440;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000440:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15324782	15324896	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000440;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000440:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15324897	15327303	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000440;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000440:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327304	15327452	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000440;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000440:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15327453	15327942	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000440;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000440:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327943	15328155	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000440;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000440:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15328156	15345455	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000440;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000440:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15345456	15345661	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000440;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000440:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15345662	15346501	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000440;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000440:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15346502	15346607	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000440;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000440:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15346608	15348121	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000440;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000440:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15348122	15348251	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000440;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000440:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15348252	15376903	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000440;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000440:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15376904	15377299	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000440;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000440:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377300	15377823	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000440;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000440:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15377824	15377919	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000440;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000440:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377920	15379777	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000440;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000440:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15379778	15379870	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000440;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000440:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15379871	15381667	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000440;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000440:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15381668	15381887	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000440;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000440:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15381888	15382330	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000440;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000440:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15382331	15382381	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000440;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000440:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15382382	15388167	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000440;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000440:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15388168	15388294	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000440;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000440:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15388295	15391156	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000440;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000440:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15391157	15391250	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000440;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000440:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15391251	15415763	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000440;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000440:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15415764	15415798	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000440;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000440:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15415799	15418822	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000440;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000440:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15418823	15418877	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000440;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000440:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15418878	15432897	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000440;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000440:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15432898	15433018	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000440;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000440:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15433019	15436639	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000440;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000440:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15436640	15436698	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000440;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000440:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15436699	15470908	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000440;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000440:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15470909	15470958	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000440;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000440:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15470959	15492012	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000440;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000440:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15492013	15492121	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000440;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000440:24;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15492122	15501145	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000440;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000440:24;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501146	15501209	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000440;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000440:25;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15501210	15501405	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000440;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000440:25;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501406	15502562	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000440;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000440:26;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	15270284	15502562	1000	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000441;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_G0000167;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03009_ch_T0000441;Name=UTY
HG03009_chrY	CAT	exon	15270284	15271787	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000441;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000441:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15271788	15272921	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000441;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000441:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15272922	15273092	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000441;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000441:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15273093	15282182	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000441;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000441:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15282183	15282309	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000441;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000441:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15282310	15319611	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000441;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000441:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15319612	15319753	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000441;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000441:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15319754	15320861	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000441;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000441:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15320862	15321049	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000441;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000441:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15321050	15324781	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000441;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000441:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15324782	15324896	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000441;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000441:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15324897	15327303	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000441;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000441:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327304	15327452	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000441;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000441:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15327453	15327942	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000441;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000441:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327943	15328155	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000441;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000441:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15328156	15345455	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000441;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000441:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15345456	15345661	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000441;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000441:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15345662	15346501	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000441;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000441:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15346502	15346607	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000441;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000441:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15346608	15348121	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000441;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000441:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15348122	15348251	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000441;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000441:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15348252	15376903	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000441;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000441:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15376904	15377299	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000441;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000441:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377300	15377823	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000441;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000441:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15377824	15377919	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000441;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000441:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377920	15379777	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000441;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000441:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15379778	15379870	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000441;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000441:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15379871	15380211	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000441;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000441:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15380212	15380347	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000441;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000441:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15380348	15381667	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000441;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000441:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15381668	15381887	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000441;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000441:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15381888	15382330	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000441;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000441:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15382331	15382429	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000441;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000441:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15382430	15388167	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000441;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000441:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15388168	15388294	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000441;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000441:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15388295	15391156	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000441;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000441:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15391157	15391250	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000441;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000441:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15391251	15415763	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000441;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000441:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15415764	15415798	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000441;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000441:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15415799	15418822	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000441;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000441:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15418823	15418877	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000441;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000441:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15418878	15432897	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000441;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000441:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15432898	15433018	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000441;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000441:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15433019	15436639	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000441;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000441:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15436640	15436698	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000441;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000441:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15436699	15470908	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000441;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000441:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15470909	15470958	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000441;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000441:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15470959	15492012	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000441;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000441:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15492013	15492121	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000441;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000441:24;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15492122	15501145	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000441;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000441:24;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501146	15501209	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000441;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000441:25;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15501210	15501405	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000441;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000441:25;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501406	15502562	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000441;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000441:26;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	15270284	15502562	1000	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000442;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_G0000167;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03009_ch_T0000442;Name=UTY
HG03009_chrY	CAT	exon	15270284	15271787	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000442;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000442:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15271788	15272921	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000442;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000442:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15272922	15273092	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000442;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000442:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15273093	15282182	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000442;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000442:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15282183	15282309	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000442;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000442:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15282310	15319611	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000442;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000442:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15319612	15319753	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000442;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000442:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15319754	15320861	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000442;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000442:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15320862	15321049	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000442;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000442:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15321050	15324781	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000442;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000442:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15324782	15324896	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000442;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000442:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15324897	15327303	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000442;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000442:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327304	15327452	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000442;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000442:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15327453	15327942	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000442;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000442:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327943	15328155	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000442;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000442:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15328156	15345455	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000442;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000442:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15345456	15345661	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000442;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000442:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15345662	15346501	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000442;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000442:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15346502	15346607	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000442;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000442:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15346608	15348121	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000442;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000442:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15348122	15348251	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000442;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000442:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15348252	15357463	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000442;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000442:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15357464	15358236	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000442;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000442:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15358237	15376903	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000442;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000442:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15376904	15377299	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000442;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000442:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377300	15377823	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000442;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000442:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15377824	15377919	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000442;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000442:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377920	15379777	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000442;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000442:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15379778	15379870	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000442;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000442:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15379871	15380211	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000442;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000442:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15380212	15380422	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000442;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000442:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15380423	15380988	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000442;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000442:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15380989	15381123	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000442;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000442:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15381124	15381667	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000442;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000442:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15381668	15381887	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000442;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000442:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15381888	15382330	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000442;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000442:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15382331	15382429	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000442;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000442:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15382430	15388167	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000442;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000442:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15388168	15388294	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000442;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000442:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15388295	15391156	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000442;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000442:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15391157	15391250	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000442;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000442:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15391251	15415763	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000442;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000442:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15415764	15415798	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000442;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000442:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15415799	15418822	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000442;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000442:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15418823	15418877	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000442;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000442:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15418878	15432897	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000442;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000442:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15432898	15433018	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000442;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000442:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15433019	15436639	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000442;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000442:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15436640	15436698	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000442;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000442:24;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15436699	15470908	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000442;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000442:24;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15470909	15470958	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000442;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000442:25;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15470959	15492012	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000442;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000442:25;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15492013	15492121	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000442;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000442:26;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15492122	15501145	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000442;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000442:26;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501146	15501209	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000442;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000442:27;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15501210	15501405	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000442;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000442:27;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501406	15502562	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000442;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000442:28;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	15270284	15502562	1000	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000443;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_G0000167;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03009_ch_T0000443;Name=UTY
HG03009_chrY	CAT	exon	15270284	15271787	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000443;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000443:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15271788	15272921	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000443;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000443:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15272922	15273092	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000443;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000443:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15273093	15282182	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000443;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000443:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15282183	15282309	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000443;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000443:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15282310	15319611	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000443;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000443:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15319612	15319753	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000443;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000443:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15319754	15320861	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000443;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000443:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15320862	15321049	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000443;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000443:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15321050	15324781	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000443;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000443:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15324782	15324896	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000443;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000443:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15324897	15327303	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000443;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000443:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327304	15327452	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000443;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000443:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15327453	15327557	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000443;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000443:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327558	15327625	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000443;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000443:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15327626	15327942	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000443;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000443:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327943	15328155	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000443;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000443:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15328156	15345455	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000443;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000443:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15345456	15345661	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000443;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000443:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15345662	15346501	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000443;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000443:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15346502	15346607	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000443;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000443:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15346608	15348121	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000443;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000443:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15348122	15348251	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000443;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000443:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15348252	15376903	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000443;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000443:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15376904	15377299	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000443;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000443:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377300	15377823	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000443;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000443:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15377824	15377919	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000443;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000443:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377920	15379777	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000443;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000443:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15379778	15379870	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000443;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000443:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15379871	15380988	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000443;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000443:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15380989	15381123	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000443;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000443:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15381124	15381667	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000443;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000443:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15381668	15381887	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000443;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000443:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15381888	15382330	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000443;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000443:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15382331	15382381	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000443;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000443:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15382382	15388167	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000443;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000443:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15388168	15388294	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000443;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000443:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15388295	15391156	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000443;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000443:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15391157	15391250	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000443;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000443:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15391251	15415763	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000443;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000443:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15415764	15415798	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000443;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000443:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15415799	15418822	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000443;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000443:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15418823	15418877	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000443;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000443:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15418878	15432897	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000443;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000443:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15432898	15433018	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000443;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000443:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15433019	15436639	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000443;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000443:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15436640	15436698	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000443;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000443:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15436699	15470908	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000443;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000443:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15470909	15470958	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000443;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000443:24;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15470959	15492012	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000443;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000443:24;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15492013	15492121	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000443;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000443:25;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15492122	15501145	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000443;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000443:25;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501146	15501209	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000443;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000443:26;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15501210	15501405	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000443;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000443:26;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501406	15502562	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000443;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000443:27;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	15270284	15502562	1000	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000444;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_G0000167;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03009_ch_T0000444;Name=UTY
HG03009_chrY	CAT	exon	15270284	15271787	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000444;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000444:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15271788	15272921	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000444;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000444:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15272922	15273092	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000444;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000444:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15273093	15282182	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000444;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000444:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15282183	15282309	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000444;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000444:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15282310	15319611	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000444;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000444:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15319612	15319753	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000444;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000444:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15319754	15320861	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000444;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000444:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15320862	15321049	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000444;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000444:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15321050	15324781	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000444;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000444:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15324782	15324896	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000444;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000444:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15324897	15327303	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000444;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000444:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327304	15327452	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000444;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000444:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15327453	15327942	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000444;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000444:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327943	15328155	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000444;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000444:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15328156	15345455	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000444;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000444:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15345456	15345661	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000444;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000444:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15345662	15346501	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000444;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000444:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15346502	15346607	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000444;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000444:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15346608	15348121	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000444;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000444:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15348122	15348251	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000444;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000444:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15348252	15357463	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000444;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000444:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15357464	15358236	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000444;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000444:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15358237	15377275	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000444;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000444:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15377276	15377429	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000444;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000444:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377430	15377823	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000444;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000444:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15377824	15377919	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000444;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000444:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377920	15379777	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000444;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000444:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15379778	15379870	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000444;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000444:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15379871	15381667	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000444;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000444:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15381668	15381887	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000444;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000444:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15381888	15382330	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000444;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000444:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15382331	15382429	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000444;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000444:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15382430	15388167	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000444;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000444:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15388168	15388294	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000444;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000444:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15388295	15391156	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000444;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000444:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15391157	15391250	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000444;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000444:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15391251	15415763	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000444;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000444:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15415764	15415798	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000444;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000444:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15415799	15418822	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000444;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000444:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15418823	15418877	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000444;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000444:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15418878	15432897	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000444;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000444:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15432898	15433018	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000444;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000444:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15433019	15436639	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000444;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000444:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15436640	15436698	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000444;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000444:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15436699	15470908	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000444;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000444:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15470909	15470958	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000444;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000444:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15470959	15492012	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000444;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000444:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15492013	15492121	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000444;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000444:24;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15492122	15501145	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000444;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000444:24;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501146	15501209	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000444;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000444:25;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15501210	15501405	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000444;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000444:25;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501406	15502562	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000444;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000444:26;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	15270284	15502562	1000	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000445;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_G0000167;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03009_ch_T0000445;Name=UTY
HG03009_chrY	CAT	exon	15270284	15271787	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000445;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000445:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15271788	15272921	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000445;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000445:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15272922	15273092	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000445;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000445:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15273093	15282182	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000445;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000445:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15282183	15282309	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000445;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000445:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15282310	15319611	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000445;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000445:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15319612	15319753	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000445;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000445:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15319754	15320861	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000445;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000445:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15320862	15321049	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000445;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000445:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15321050	15324781	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000445;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000445:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15324782	15324896	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000445;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000445:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15324897	15327303	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000445;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000445:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327304	15327452	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000445;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000445:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15327453	15327557	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000445;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000445:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327558	15327625	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000445;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000445:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15327626	15327942	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000445;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000445:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327943	15328155	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000445;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000445:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15328156	15345455	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000445;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000445:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15345456	15345661	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000445;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000445:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15345662	15346501	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000445;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000445:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15346502	15346607	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000445;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000445:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15346608	15348121	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000445;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000445:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15348122	15348251	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000445;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000445:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15348252	15376903	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000445;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000445:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15376904	15377299	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000445;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000445:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377300	15377823	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000445;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000445:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15377824	15377919	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000445;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000445:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377920	15379777	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000445;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000445:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15379778	15379870	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000445;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000445:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15379871	15381667	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000445;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000445:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15381668	15381887	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000445;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000445:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15381888	15382330	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000445;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000445:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15382331	15382429	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000445;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000445:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15382430	15388167	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000445;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000445:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15388168	15388294	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000445;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000445:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15388295	15391156	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000445;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000445:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15391157	15391250	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000445;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000445:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15391251	15415763	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000445;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000445:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15415764	15415798	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000445;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000445:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15415799	15418822	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000445;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000445:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15418823	15418877	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000445;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000445:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15418878	15432897	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000445;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000445:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15432898	15433018	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000445;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000445:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15433019	15436639	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000445;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000445:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15436640	15436698	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000445;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000445:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15436699	15470908	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000445;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000445:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15470909	15470958	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000445;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000445:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15470959	15492012	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000445;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000445:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15492013	15492121	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000445;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000445:24;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15492122	15501145	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000445;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000445:24;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501146	15501209	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000445;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000445:25;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15501210	15501405	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000445;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000445:25;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501406	15502562	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000445;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000445:26;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	15270284	15502562	1000	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000446;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_G0000167;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03009_ch_T0000446;Name=UTY
HG03009_chrY	CAT	exon	15270284	15271787	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000446;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000446:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15271788	15272921	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000446;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000446:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15272922	15273092	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000446;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000446:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15273093	15282182	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000446;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000446:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15282183	15282309	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000446;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000446:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15282310	15319611	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000446;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000446:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15319612	15319753	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000446;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000446:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15319754	15320861	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000446;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000446:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15320862	15321049	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000446;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000446:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15321050	15324781	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000446;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000446:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15324782	15324896	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000446;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000446:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15324897	15327303	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000446;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000446:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327304	15327452	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000446;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000446:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15327453	15327942	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000446;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000446:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327943	15328155	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000446;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000446:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15328156	15345455	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000446;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000446:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15345456	15345661	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000446;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000446:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15345662	15346501	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000446;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000446:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15346502	15346607	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000446;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000446:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15346608	15348121	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000446;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000446:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15348122	15348251	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000446;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000446:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15348252	15376903	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000446;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000446:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15376904	15377299	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000446;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000446:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377300	15377823	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000446;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000446:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15377824	15377919	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000446;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000446:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377920	15379777	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000446;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000446:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15379778	15379870	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000446;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000446:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15379871	15380988	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000446;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000446:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15380989	15381123	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000446;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000446:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15381124	15381667	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000446;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000446:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15381668	15381887	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000446;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000446:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15381888	15382330	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000446;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000446:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15382331	15382429	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000446;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000446:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15382430	15388167	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000446;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000446:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15388168	15388294	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000446;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000446:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15388295	15391156	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000446;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000446:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15391157	15391250	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000446;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000446:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15391251	15415763	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000446;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000446:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15415764	15415798	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000446;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000446:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15415799	15418822	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000446;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000446:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15418823	15418877	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000446;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000446:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15418878	15432897	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000446;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000446:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15432898	15433018	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000446;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000446:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15433019	15436639	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000446;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000446:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15436640	15436698	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000446;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000446:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15436699	15470908	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000446;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000446:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15470909	15470958	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000446;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000446:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15470959	15492012	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000446;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000446:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15492013	15492121	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000446;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000446:24;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15492122	15501145	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000446;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000446:24;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501146	15501209	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000446;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000446:25;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15501210	15501405	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000446;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000446:25;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501406	15502562	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000446;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000446:26;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	15270284	15502562	1000	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000447;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_G0000167;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03009_ch_T0000447;Name=UTY
HG03009_chrY	CAT	exon	15270284	15271787	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000447;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000447:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15271788	15272921	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000447;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000447:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15272922	15273092	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000447;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000447:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15273093	15282182	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000447;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000447:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15282183	15282309	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000447;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000447:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15282310	15319611	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000447;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000447:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15319612	15319753	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000447;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000447:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15319754	15320861	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000447;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000447:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15320862	15321049	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000447;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000447:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15321050	15324781	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000447;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000447:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15324782	15324896	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000447;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000447:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15324897	15327303	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000447;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000447:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327304	15327452	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000447;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000447:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15327453	15327942	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000447;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000447:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327943	15328155	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000447;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000447:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15328156	15345455	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000447;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000447:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15345456	15345661	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000447;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000447:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15345662	15346501	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000447;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000447:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15346502	15346607	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000447;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000447:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15346608	15348121	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000447;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000447:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15348122	15348251	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000447;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000447:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15348252	15376903	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000447;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000447:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15376904	15377299	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000447;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000447:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377300	15377823	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000447;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000447:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15377824	15377919	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000447;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000447:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377920	15379777	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000447;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000447:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15379778	15379870	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000447;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000447:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15379871	15380364	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000447;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000447:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15380365	15380520	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000447;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000447:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15380521	15380988	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000447;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000447:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15380989	15381123	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000447;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000447:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15381124	15381667	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000447;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000447:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15381668	15381887	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000447;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000447:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15381888	15382330	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000447;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000447:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15382331	15382429	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000447;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000447:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15382430	15388167	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000447;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000447:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15388168	15388294	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000447;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000447:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15388295	15391156	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000447;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000447:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15391157	15391250	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000447;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000447:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15391251	15415763	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000447;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000447:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15415764	15415798	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000447;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000447:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15415799	15418822	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000447;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000447:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15418823	15418877	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000447;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000447:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15418878	15432897	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000447;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000447:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15432898	15433018	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000447;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000447:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15433019	15436639	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000447;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000447:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15436640	15436698	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000447;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000447:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15436699	15470908	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000447;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000447:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15470909	15470958	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000447;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000447:24;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15470959	15492012	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000447;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000447:24;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15492013	15492121	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000447;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000447:25;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15492122	15501145	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000447;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000447:25;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501146	15501209	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000447;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000447:26;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15501210	15501405	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000447;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000447:26;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501406	15502562	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000447;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000447:27;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	15270284	15502562	1000	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000448;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_G0000167;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03009_ch_T0000448;Name=UTY
HG03009_chrY	CAT	exon	15270284	15271787	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000448;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000448:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15271788	15272921	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000448;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000448:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15272922	15273092	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000448;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000448:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15273093	15282182	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000448;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000448:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15282183	15282309	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000448;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000448:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15282310	15319611	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000448;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000448:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15319612	15319753	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000448;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000448:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15319754	15324781	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000448;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000448:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15324782	15324896	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000448;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000448:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15324897	15327303	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000448;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000448:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327304	15327452	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000448;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000448:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15327453	15327942	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000448;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000448:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327943	15328155	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000448;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000448:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15328156	15345455	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000448;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000448:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15345456	15345661	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000448;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000448:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15345662	15346501	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000448;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000448:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15346502	15346607	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000448;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000448:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15346608	15348121	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000448;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000448:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15348122	15348251	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000448;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000448:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15348252	15376903	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000448;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000448:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15376904	15377299	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000448;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000448:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377300	15377823	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000448;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000448:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15377824	15377919	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000448;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000448:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377920	15379777	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000448;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000448:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15379778	15379870	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000448;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000448:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15379871	15380364	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000448;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000448:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15380365	15380520	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000448;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000448:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15380521	15380988	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000448;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000448:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15380989	15381123	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000448;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000448:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15381124	15381667	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000448;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000448:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15381668	15381887	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000448;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000448:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15381888	15382330	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000448;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000448:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15382331	15382429	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000448;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000448:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15382430	15388167	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000448;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000448:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15388168	15388294	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000448;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000448:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15388295	15391156	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000448;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000448:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15391157	15391250	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000448;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000448:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15391251	15415763	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000448;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000448:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15415764	15415798	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000448;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000448:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15415799	15418822	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000448;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000448:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15418823	15418877	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000448;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000448:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15418878	15432897	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000448;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000448:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15432898	15433018	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000448;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000448:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15433019	15436639	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000448;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000448:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15436640	15436698	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000448;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000448:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15436699	15492012	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000448;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000448:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15492013	15492121	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000448;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000448:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15492122	15501145	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000448;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000448:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501146	15501209	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000448;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000448:24;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15501210	15501405	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000448;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000448:24;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501406	15502562	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000448;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000448:25;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	15270284	15502562	1000	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000449;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_G0000167;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03009_ch_T0000449;Name=UTY
HG03009_chrY	CAT	exon	15270284	15271787	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000449;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000449:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15271788	15272921	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000449;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000449:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15272922	15273092	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000449;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000449:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15273093	15282182	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000449;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000449:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15282183	15282309	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000449;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000449:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15282310	15319611	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000449;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000449:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15319612	15319753	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000449;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000449:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15319754	15320861	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000449;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000449:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15320862	15321049	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000449;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000449:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15321050	15321905	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000449;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000449:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15321906	15321973	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000449;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000449:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15321974	15324781	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000449;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000449:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15324782	15324896	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000449;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000449:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15324897	15327303	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000449;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000449:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327304	15327452	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000449;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000449:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15327453	15327942	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000449;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000449:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327943	15328155	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000449;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000449:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15328156	15345455	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000449;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000449:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15345456	15345661	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000449;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000449:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15345662	15346501	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000449;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000449:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15346502	15346607	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000449;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000449:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15346608	15348121	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000449;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000449:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15348122	15348251	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000449;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000449:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15348252	15376903	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000449;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000449:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15376904	15377299	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000449;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000449:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377300	15377823	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000449;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000449:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15377824	15377919	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000449;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000449:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377920	15379777	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000449;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000449:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15379778	15379870	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000449;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000449:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15379871	15380364	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000449;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000449:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15380365	15380454	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000449;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000449:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15380455	15381667	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000449;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000449:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15381668	15381887	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000449;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000449:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15381888	15382330	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000449;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000449:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15382331	15382429	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000449;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000449:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15382430	15388167	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000449;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000449:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15388168	15388294	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000449;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000449:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15388295	15391156	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000449;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000449:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15391157	15391250	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000449;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000449:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15391251	15415763	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000449;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000449:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15415764	15415798	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000449;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000449:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15415799	15418822	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000449;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000449:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15418823	15418877	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000449;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000449:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15418878	15421842	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000449;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000449:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15421843	15421956	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000449;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000449:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15421957	15432897	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000449;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000449:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15432898	15433018	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000449;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000449:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15433019	15436639	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000449;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000449:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15436640	15436698	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000449;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000449:24;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15436699	15470908	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000449;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000449:24;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15470909	15470958	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000449;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000449:25;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15470959	15492012	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000449;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000449:25;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15492013	15492121	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000449;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000449:26;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15492122	15501145	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000449;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000449:26;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501146	15501209	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000449;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000449:27;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15501210	15501405	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000449;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000449:27;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501406	15502562	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000449;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000449:28;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	15270284	15502562	1000	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000450;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_G0000167;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03009_ch_T0000450;Name=UTY
HG03009_chrY	CAT	exon	15270284	15271787	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000450;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000450:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15271788	15272906	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000450;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000450:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15272907	15273092	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000450;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000450:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15273093	15282182	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000450;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000450:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15282183	15282309	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000450;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000450:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15282310	15319611	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000450;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000450:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15319612	15319753	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000450;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000450:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15319754	15320861	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000450;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000450:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15320862	15321049	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000450;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000450:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15321050	15321905	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000450;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000450:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15321906	15321973	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000450;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000450:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15321974	15324781	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000450;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000450:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15324782	15324896	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000450;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000450:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15324897	15327303	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000450;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000450:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327304	15327452	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000450;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000450:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15327453	15327942	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000450;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000450:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327943	15328155	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000450;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000450:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15328156	15345455	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000450;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000450:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15345456	15345661	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000450;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000450:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15345662	15346501	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000450;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000450:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15346502	15346607	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000450;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000450:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15346608	15348121	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000450;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000450:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15348122	15348251	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000450;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000450:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15348252	15376903	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000450;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000450:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15376904	15377299	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000450;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000450:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377300	15377823	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000450;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000450:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15377824	15377919	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000450;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000450:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377920	15379777	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000450;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000450:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15379778	15379870	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000450;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000450:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15379871	15380364	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000450;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000450:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15380365	15380422	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000450;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000450:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15380423	15381667	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000450;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000450:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15381668	15381887	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000450;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000450:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15381888	15382330	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000450;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000450:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15382331	15382429	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000450;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000450:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15382430	15388167	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000450;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000450:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15388168	15388294	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000450;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000450:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15388295	15391156	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000450;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000450:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15391157	15391250	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000450;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000450:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15391251	15415763	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000450;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000450:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15415764	15415798	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000450;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000450:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15415799	15418822	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000450;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000450:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15418823	15418877	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000450;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000450:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15418878	15432897	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000450;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000450:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15432898	15433018	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000450;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000450:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15433019	15436639	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000450;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000450:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15436640	15436698	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000450;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000450:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15436699	15470908	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000450;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000450:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15470909	15470958	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000450;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000450:24;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15470959	15492012	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000450;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000450:24;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15492013	15492121	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000450;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000450:25;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15492122	15501145	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000450;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000450:25;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501146	15501209	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000450;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000450:26;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15501210	15501405	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000450;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000450:26;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501406	15502562	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000450;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000450:27;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	15270284	15502562	1000	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000451;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_G0000167;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03009_ch_T0000451;Name=UTY
HG03009_chrY	CAT	exon	15270284	15271787	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000451;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000451:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15271788	15272921	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000451;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000451:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15272922	15273092	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000451;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000451:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15273093	15282182	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000451;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000451:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15282183	15282309	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000451;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000451:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15282310	15319611	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000451;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000451:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15319612	15319753	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000451;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000451:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15319754	15320861	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000451;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000451:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15320862	15321049	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000451;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000451:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15321050	15324781	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000451;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000451:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15324782	15324896	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000451;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000451:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15324897	15327303	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000451;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000451:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327304	15327390	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000451;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000451:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15327391	15327942	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000451;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000451:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327943	15328155	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000451;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000451:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15328156	15345455	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000451;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000451:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15345456	15345661	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000451;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000451:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15345662	15346501	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000451;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000451:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15346502	15346607	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000451;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000451:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15346608	15348121	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000451;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000451:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15348122	15348251	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000451;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000451:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15348252	15376903	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000451;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000451:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15376904	15377299	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000451;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000451:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377300	15377823	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000451;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000451:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15377824	15377919	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000451;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000451:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377920	15379777	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000451;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000451:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15379778	15379870	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000451;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000451:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15379871	15381667	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000451;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000451:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15381668	15381887	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000451;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000451:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15381888	15382330	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000451;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000451:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15382331	15382429	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000451;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000451:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15382430	15388167	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000451;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000451:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15388168	15388294	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000451;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000451:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15388295	15391156	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000451;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000451:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15391157	15391250	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000451;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000451:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15391251	15415763	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000451;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000451:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15415764	15415798	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000451;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000451:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15415799	15418822	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000451;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000451:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15418823	15418877	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000451;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000451:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15418878	15421842	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000451;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000451:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15421843	15421956	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000451;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000451:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15421957	15432897	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000451;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000451:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15432898	15433018	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000451;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000451:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15433019	15436639	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000451;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000451:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15436640	15436698	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000451;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000451:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15436699	15470908	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000451;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000451:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15470909	15470958	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000451;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000451:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15470959	15492012	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000451;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000451:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15492013	15492121	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000451;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000451:24;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15492122	15501145	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000451;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000451:24;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501146	15501209	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000451;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000451:25;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15501210	15501405	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000451;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000451:25;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501406	15502562	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000451;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000451:26;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	15270284	15502562	1000	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000452;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_G0000167;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03009_ch_T0000452;Name=UTY
HG03009_chrY	CAT	exon	15270284	15271787	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000452;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000452:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15271788	15272921	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000452;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000452:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15272922	15273092	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000452;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000452:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15273093	15282182	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000452;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000452:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15282183	15282309	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000452;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000452:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15282310	15319611	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000452;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000452:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15319612	15319753	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000452;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000452:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15319754	15320861	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000452;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000452:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15320862	15321049	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000452;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000452:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15321050	15324781	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000452;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000452:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15324782	15324896	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000452;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000452:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15324897	15326086	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000452;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000452:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15326087	15326115	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000452;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000452:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15326116	15327303	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000452;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000452:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327304	15327452	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000452;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000452:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15327453	15327942	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000452;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000452:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327943	15328155	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000452;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000452:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15328156	15345455	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000452;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000452:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15345456	15345661	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000452;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000452:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15345662	15346501	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000452;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000452:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15346502	15346607	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000452;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000452:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15346608	15348243	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000452;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000452:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15348244	15348251	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000452;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000452:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15348252	15376903	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000452;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000452:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15376904	15377299	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000452;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000452:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377300	15377823	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000452;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000452:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15377824	15377919	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000452;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000452:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377920	15379777	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000452;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000452:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15379778	15379870	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000452;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000452:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15379871	15380364	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000452;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000452:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15380365	15380520	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000452;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000452:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15380521	15381667	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000452;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000452:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15381668	15381887	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000452;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000452:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15381888	15382330	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000452;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000452:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15382331	15382429	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000452;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000452:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15382430	15388167	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000452;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000452:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15388168	15388294	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000452;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000452:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15388295	15391156	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000452;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000452:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15391157	15391250	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000452;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000452:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15391251	15415763	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000452;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000452:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15415764	15415798	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000452;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000452:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15415799	15418822	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000452;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000452:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15418823	15418877	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000452;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000452:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15418878	15425687	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000452;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000452:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15425688	15425793	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000452;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000452:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15425794	15432897	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000452;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000452:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15432898	15433018	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000452;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000452:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15433019	15436639	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000452;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000452:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15436640	15436698	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000452;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000452:24;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15436699	15470908	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000452;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000452:24;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15470909	15470958	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000452;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000452:25;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15470959	15492012	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000452;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000452:25;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15492013	15492121	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000452;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000452:26;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15492122	15501145	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000452;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000452:26;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501146	15501209	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000452;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000452:27;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15501210	15501405	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000452;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000452:27;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501406	15502562	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000452;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000452:28;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	15270284	15502562	1000	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000453;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_G0000167;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03009_ch_T0000453;Name=UTY
HG03009_chrY	CAT	exon	15270284	15271787	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000453;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000453:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15271788	15272921	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000453;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000453:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15272922	15273092	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000453;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000453:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15273093	15282182	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000453;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000453:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15282183	15282309	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000453;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000453:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15282310	15319611	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000453;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000453:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15319612	15319753	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000453;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000453:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15319754	15320861	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000453;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000453:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15320862	15321049	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000453;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000453:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15321050	15321881	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000453;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000453:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15321882	15321973	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000453;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000453:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15321974	15324781	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000453;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000453:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15324782	15324896	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000453;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000453:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15324897	15327303	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000453;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000453:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327304	15327452	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000453;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000453:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15327453	15327942	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000453;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000453:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327943	15328155	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000453;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000453:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15328156	15345455	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000453;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000453:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15345456	15345661	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000453;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000453:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15345662	15346501	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000453;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000453:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15346502	15346607	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000453;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000453:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15346608	15348121	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000453;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000453:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15348122	15348251	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000453;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000453:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15348252	15357463	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000453;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000453:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15357464	15358236	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000453;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000453:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15358237	15376903	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000453;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000453:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15376904	15376993	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000453;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000453:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15376994	15377275	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000453;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000453:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15377276	15377299	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000453;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000453:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377300	15377823	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000453;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000453:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15377824	15377919	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000453;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000453:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377920	15379777	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000453;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000453:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15379778	15379870	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000453;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000453:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15379871	15380364	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000453;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000453:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15380365	15380520	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000453;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000453:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15380521	15380988	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000453;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000453:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15380989	15381123	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000453;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000453:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15381124	15381667	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000453;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000453:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15381668	15381887	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000453;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000453:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15381888	15382330	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000453;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000453:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15382331	15382429	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000453;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000453:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15382430	15388167	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000453;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000453:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15388168	15388294	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000453;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000453:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15388295	15391156	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000453;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000453:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15391157	15391250	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000453;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000453:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15391251	15415763	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000453;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000453:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15415764	15415798	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000453;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000453:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15415799	15418822	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000453;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000453:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15418823	15418877	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000453;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000453:24;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15418878	15432897	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000453;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000453:24;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15432898	15433018	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000453;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000453:25;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15433019	15436639	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000453;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000453:25;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15436640	15436698	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000453;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000453:26;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15436699	15470908	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000453;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000453:26;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15470909	15470958	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000453;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000453:27;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15470959	15492012	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000453;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000453:27;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15492013	15492121	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000453;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000453:28;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15492122	15501145	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000453;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000453:28;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501146	15501209	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000453;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000453:29;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15501210	15501405	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000453;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000453:29;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501406	15502562	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000453;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000453:30;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	15270284	15502562	1000	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000454;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_G0000167;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03009_ch_T0000454;Name=UTY
HG03009_chrY	CAT	exon	15270284	15271787	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000454;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000454:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15271788	15282182	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000454;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000454:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15282183	15282309	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000454;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000454:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15282310	15319611	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000454;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000454:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15319612	15319753	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000454;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000454:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15319754	15320861	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000454;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000454:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15320862	15321049	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000454;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000454:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15321050	15324781	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000454;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000454:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15324782	15324896	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000454;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000454:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15324897	15327303	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000454;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000454:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327304	15327452	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000454;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000454:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15327453	15327942	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000454;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000454:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327943	15328155	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000454;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000454:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15328156	15345455	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000454;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000454:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15345456	15345661	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000454;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000454:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15345662	15346501	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000454;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000454:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15346502	15346607	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000454;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000454:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15346608	15348121	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000454;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000454:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15348122	15348251	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000454;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000454:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15348252	15376903	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000454;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000454:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15376904	15377299	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000454;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000454:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377300	15377823	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000454;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000454:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15377824	15377919	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000454;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000454:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377920	15379777	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000454;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000454:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15379778	15379870	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000454;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000454:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15379871	15380364	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000454;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000454:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15380365	15380422	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000454;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000454:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15380423	15381667	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000454;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000454:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15381668	15381887	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000454;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000454:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15381888	15382330	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000454;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000454:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15382331	15382429	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000454;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000454:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15382430	15388167	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000454;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000454:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15388168	15388294	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000454;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000454:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15388295	15391156	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000454;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000454:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15391157	15391250	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000454;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000454:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15391251	15415763	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000454;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000454:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15415764	15415798	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000454;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000454:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15415799	15418822	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000454;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000454:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15418823	15418877	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000454;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000454:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15418878	15432897	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000454;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000454:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15432898	15433018	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000454;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000454:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15433019	15436639	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000454;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000454:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15436640	15436698	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000454;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000454:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15436699	15470908	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000454;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000454:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15470909	15470958	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000454;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000454:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15470959	15492012	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000454;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000454:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15492013	15492121	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000454;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000454:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15492122	15501145	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000454;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000454:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501146	15501209	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000454;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000454:24;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15501210	15501405	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000454;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000454:24;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501406	15502562	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000454;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000454:25;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	15270284	15502562	1000	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000455;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_G0000167;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03009_ch_T0000455;Name=UTY
HG03009_chrY	CAT	exon	15270284	15271787	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000455;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000455:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15271788	15282182	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000455;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000455:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15282183	15282309	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000455;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000455:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15282310	15319611	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000455;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000455:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15319612	15319753	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000455;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000455:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15319754	15320861	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000455;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000455:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15320862	15321049	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000455;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000455:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15321050	15324781	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000455;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000455:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15324782	15324896	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000455;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000455:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15324897	15327303	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000455;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000455:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327304	15327452	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000455;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000455:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15327453	15327942	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000455;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000455:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327943	15328155	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000455;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000455:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15328156	15345455	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000455;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000455:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15345456	15345661	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000455;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000455:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15345662	15346501	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000455;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000455:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15346502	15346607	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000455;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000455:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15346608	15348121	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000455;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000455:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15348122	15348251	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000455;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000455:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15348252	15376903	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000455;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000455:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15376904	15377299	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000455;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000455:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377300	15377823	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000455;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000455:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15377824	15377919	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000455;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000455:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377920	15379777	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000455;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000455:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15379778	15379870	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000455;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000455:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15379871	15380988	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000455;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000455:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15380989	15381123	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000455;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000455:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15381124	15381667	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000455;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000455:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15381668	15381887	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000455;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000455:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15381888	15382330	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000455;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000455:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15382331	15382429	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000455;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000455:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15382430	15388167	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000455;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000455:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15388168	15388294	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000455;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000455:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15388295	15391156	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000455;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000455:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15391157	15391250	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000455;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000455:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15391251	15415763	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000455;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000455:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15415764	15415798	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000455;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000455:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15415799	15418822	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000455;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000455:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15418823	15418877	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000455;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000455:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15418878	15432897	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000455;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000455:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15432898	15433018	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000455;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000455:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15433019	15436639	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000455;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000455:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15436640	15436698	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000455;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000455:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15436699	15470908	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000455;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000455:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15470909	15470958	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000455;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000455:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15470959	15492012	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000455;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000455:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15492013	15492121	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000455;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000455:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15492122	15501145	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000455;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000455:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501146	15501209	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000455;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000455:24;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15501210	15501405	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000455;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000455:24;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501406	15502562	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000455;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000455:25;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	15270284	15502562	1000	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000456;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_G0000167;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03009_ch_T0000456;Name=UTY
HG03009_chrY	CAT	exon	15270284	15271787	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000456;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000456:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15271788	15272921	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000456;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000456:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15272922	15273092	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000456;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000456:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15273093	15282182	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000456;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000456:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15282183	15282309	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000456;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000456:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15282310	15319611	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000456;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000456:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15319612	15319753	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000456;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000456:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15319754	15320861	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000456;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000456:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15320862	15321049	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000456;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000456:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15321050	15324781	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000456;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000456:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15324782	15324896	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000456;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000456:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15324897	15327303	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000456;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000456:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327304	15327452	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000456;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000456:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15327453	15327942	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000456;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000456:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327943	15328155	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000456;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000456:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15328156	15345455	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000456;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000456:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15345456	15345661	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000456;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000456:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15345662	15346501	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000456;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000456:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15346502	15346607	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000456;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000456:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15346608	15348243	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000456;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000456:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15348244	15348251	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000456;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000456:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15348252	15376903	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000456;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000456:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15376904	15377299	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000456;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000456:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377300	15377823	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000456;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000456:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15377824	15377919	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000456;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000456:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377920	15379777	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000456;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000456:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15379778	15379870	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000456;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000456:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15379871	15380364	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000456;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000456:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15380365	15380520	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000456;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000456:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15380521	15380988	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000456;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000456:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15380989	15381123	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000456;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000456:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15381124	15381667	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000456;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000456:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15381668	15381887	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000456;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000456:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15381888	15382330	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000456;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000456:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15382331	15382429	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000456;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000456:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15382430	15388167	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000456;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000456:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15388168	15388294	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000456;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000456:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15388295	15391156	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000456;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000456:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15391157	15391250	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000456;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000456:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15391251	15418822	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000456;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000456:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15418823	15418877	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000456;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000456:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15418878	15425687	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000456;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000456:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15425688	15425793	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000456;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000456:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15425794	15432897	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000456;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000456:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15432898	15433018	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000456;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000456:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15433019	15436639	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000456;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000456:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15436640	15436698	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000456;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000456:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15436699	15470908	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000456;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000456:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15470909	15470958	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000456;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000456:24;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15470959	15492012	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000456;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000456:24;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15492013	15492121	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000456;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000456:25;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15492122	15501145	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000456;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000456:25;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501146	15501209	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000456;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000456:26;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15501210	15501405	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000456;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000456:26;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501406	15502562	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000456;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000456:27;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	15270284	15502562	1000	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000457;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_G0000167;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03009_ch_T0000457;Name=UTY
HG03009_chrY	CAT	exon	15270284	15271787	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000457;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000457:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15271788	15272921	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000457;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000457:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15272922	15273092	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000457;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000457:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15273093	15282182	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000457;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000457:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15282183	15282309	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000457;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000457:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15282310	15319611	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000457;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000457:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15319612	15319753	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000457;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000457:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15319754	15320861	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000457;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000457:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15320862	15321049	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000457;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000457:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15321050	15324781	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000457;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000457:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15324782	15324896	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000457;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000457:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15324897	15327303	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000457;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000457:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327304	15327452	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000457;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000457:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15327453	15327942	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000457;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000457:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327943	15328155	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000457;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000457:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15328156	15345455	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000457;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000457:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15345456	15345661	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000457;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000457:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15345662	15346501	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000457;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000457:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15346502	15346607	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000457;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000457:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15346608	15348121	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000457;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000457:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15348122	15348251	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000457;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000457:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15348252	15376903	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000457;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000457:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15376904	15377299	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000457;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000457:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377300	15377823	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000457;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000457:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15377824	15377919	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000457;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000457:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377920	15379777	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000457;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000457:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15379778	15379870	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000457;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000457:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15379871	15380364	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000457;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000457:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15380365	15380520	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000457;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000457:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15380521	15380988	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000457;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000457:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15380989	15381123	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000457;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000457:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15381124	15381667	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000457;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000457:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15381668	15381887	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000457;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000457:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15381888	15388167	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000457;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000457:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15388168	15388294	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000457;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000457:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15388295	15391156	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000457;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000457:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15391157	15391250	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000457;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000457:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15391251	15415763	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000457;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000457:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15415764	15415798	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000457;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000457:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15415799	15418822	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000457;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000457:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15418823	15418877	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000457;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000457:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15418878	15432897	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000457;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000457:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15432898	15433018	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000457;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000457:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15433019	15436639	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000457;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000457:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15436640	15436698	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000457;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000457:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15436699	15470908	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000457;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000457:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15470909	15470958	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000457;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000457:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15470959	15492012	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000457;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000457:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15492013	15492121	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000457;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000457:24;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15492122	15501145	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000457;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000457:24;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501146	15501209	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000457;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000457:25;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15501210	15501405	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000457;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000457:25;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501406	15502562	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000457;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000457:26;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	15270284	15502562	1000	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000458;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_G0000167;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03009_ch_T0000458;Name=UTY
HG03009_chrY	CAT	exon	15270284	15271787	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000458;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000458:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15271788	15272906	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000458;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000458:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15272907	15273092	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000458;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000458:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15273093	15282182	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000458;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000458:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15282183	15282309	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000458;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000458:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15282310	15319611	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000458;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000458:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15319612	15319753	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000458;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000458:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15319754	15320861	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000458;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000458:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15320862	15321049	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000458;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000458:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15321050	15321905	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000458;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000458:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15321906	15321973	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000458;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000458:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15321974	15324781	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000458;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000458:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15324782	15324896	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000458;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000458:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15324897	15327303	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000458;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000458:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327304	15327452	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000458;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000458:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15327453	15327942	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000458;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000458:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327943	15328155	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000458;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000458:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15328156	15345455	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000458;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000458:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15345456	15345661	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000458;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000458:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15345662	15346501	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000458;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000458:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15346502	15346607	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000458;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000458:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15346608	15348121	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000458;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000458:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15348122	15348251	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000458;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000458:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15348252	15376903	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000458;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000458:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15376904	15377299	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000458;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000458:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377300	15377823	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000458;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000458:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15377824	15377919	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000458;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000458:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377920	15379777	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000458;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000458:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15379778	15379870	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000458;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000458:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15379871	15380988	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000458;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000458:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15380989	15381123	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000458;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000458:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15381124	15381667	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000458;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000458:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15381668	15381887	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000458;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000458:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15381888	15382330	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000458;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000458:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15382331	15382429	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000458;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000458:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15382430	15388167	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000458;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000458:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15388168	15388294	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000458;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000458:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15388295	15391156	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000458;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000458:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15391157	15391250	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000458;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000458:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15391251	15415763	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000458;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000458:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15415764	15415798	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000458;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000458:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15415799	15418822	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000458;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000458:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15418823	15418877	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000458;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000458:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15418878	15432897	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000458;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000458:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15432898	15433018	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000458;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000458:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15433019	15436639	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000458;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000458:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15436640	15436698	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000458;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000458:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15436699	15470908	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000458;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000458:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15470909	15470958	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000458;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000458:24;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15470959	15492012	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000458;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000458:24;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15492013	15492121	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000458;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000458:25;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15492122	15501145	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000458;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000458:25;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501146	15501209	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000458;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000458:26;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15501210	15501405	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000458;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000458:26;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501406	15502562	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000458;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000458:27;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	15270284	15502562	1000	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000459;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_G0000167;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03009_ch_T0000459;Name=UTY
HG03009_chrY	CAT	exon	15270284	15271787	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000459;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000459:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15271788	15272906	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000459;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000459:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15272907	15273092	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000459;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000459:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15273093	15282182	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000459;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000459:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15282183	15282309	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000459;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000459:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15282310	15319611	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000459;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000459:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15319612	15319753	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000459;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000459:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15319754	15320861	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000459;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000459:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15320862	15321049	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000459;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000459:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15321050	15324781	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000459;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000459:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15324782	15324896	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000459;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000459:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15324897	15327303	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000459;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000459:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327304	15327452	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000459;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000459:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15327453	15327942	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000459;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000459:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327943	15328155	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000459;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000459:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15328156	15345455	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000459;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000459:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15345456	15345661	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000459;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000459:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15345662	15346501	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000459;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000459:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15346502	15346607	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000459;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000459:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15346608	15348121	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000459;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000459:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15348122	15348251	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000459;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000459:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15348252	15357463	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000459;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000459:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15357464	15358236	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000459;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000459:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15358237	15376903	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000459;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000459:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15376904	15377299	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000459;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000459:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377300	15377823	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000459;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000459:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15377824	15377919	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000459;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000459:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377920	15379777	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000459;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000459:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15379778	15379870	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000459;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000459:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15379871	15381667	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000459;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000459:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15381668	15381887	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000459;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000459:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15381888	15382330	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000459;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000459:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15382331	15382429	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000459;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000459:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15382430	15388167	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000459;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000459:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15388168	15388294	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000459;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000459:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15388295	15391156	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000459;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000459:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15391157	15391250	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000459;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000459:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15391251	15415763	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000459;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000459:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15415764	15415798	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000459;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000459:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15415799	15418822	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000459;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000459:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15418823	15418877	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000459;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000459:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15418878	15421842	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000459;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000459:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15421843	15421956	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000459;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000459:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15421957	15425687	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000459;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000459:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15425688	15425793	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000459;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000459:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15425794	15432897	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000459;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000459:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15432898	15433018	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000459;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000459:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15433019	15436639	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000459;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000459:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15436640	15436698	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000459;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000459:24;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15436699	15470908	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000459;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000459:24;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15470909	15470958	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000459;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000459:25;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15470959	15492012	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000459;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000459:25;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15492013	15492121	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000459;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000459:26;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15492122	15501145	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000459;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000459:26;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501146	15501209	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000459;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000459:27;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15501210	15501405	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000459;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000459:27;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501406	15502562	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000459;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000459:28;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	15270284	15502562	1000	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000460;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_G0000167;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03009_ch_T0000460;Name=UTY
HG03009_chrY	CAT	exon	15270284	15271787	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000460;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000460:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15271788	15272906	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000460;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000460:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15272907	15273092	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000460;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000460:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15273093	15282182	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000460;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000460:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15282183	15282309	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000460;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000460:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15282310	15319611	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000460;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000460:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15319612	15319753	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000460;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000460:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15319754	15320861	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000460;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000460:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15320862	15321049	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000460;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000460:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15321050	15324781	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000460;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000460:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15324782	15324896	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000460;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000460:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15324897	15327303	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000460;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000460:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327304	15327452	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000460;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000460:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15327453	15327942	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000460;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000460:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327943	15328155	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000460;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000460:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15328156	15345455	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000460;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000460:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15345456	15345661	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000460;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000460:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15345662	15346501	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000460;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000460:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15346502	15346607	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000460;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000460:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15346608	15348121	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000460;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000460:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15348122	15348251	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000460;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000460:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15348252	15376903	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000460;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000460:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15376904	15377299	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000460;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000460:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377300	15377823	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000460;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000460:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15377824	15377919	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000460;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000460:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377920	15379777	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000460;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000460:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15379778	15379870	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000460;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000460:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15379871	15381667	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000460;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000460:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15381668	15381887	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000460;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000460:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15381888	15382330	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000460;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000460:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15382331	15382429	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000460;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000460:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15382430	15391156	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000460;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000460:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15391157	15391250	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000460;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000460:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15391251	15415763	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000460;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000460:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15415764	15415798	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000460;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000460:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15415799	15418822	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000460;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000460:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15418823	15418877	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000460;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000460:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15418878	15432897	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000460;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000460:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15432898	15433018	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000460;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000460:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15433019	15436639	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000460;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000460:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15436640	15436698	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000460;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000460:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15436699	15470908	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000460;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000460:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15470909	15470958	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000460;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000460:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15470959	15492012	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000460;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000460:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15492013	15492121	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000460;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000460:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15492122	15501145	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000460;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000460:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501146	15501209	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000460;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000460:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15501210	15501405	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000460;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000460:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501406	15502562	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000460;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000460:24;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	15270284	15502562	1000	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000461;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_G0000167;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03009_ch_T0000461;Name=UTY
HG03009_chrY	CAT	exon	15270284	15271787	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000461;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000461:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15271788	15272906	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000461;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000461:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15272907	15273092	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000461;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000461:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15273093	15282182	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000461;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000461:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15282183	15282309	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000461;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000461:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15282310	15319611	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000461;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000461:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15319612	15319753	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000461;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000461:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15319754	15320861	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000461;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000461:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15320862	15321049	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000461;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000461:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15321050	15324781	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000461;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000461:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15324782	15324896	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000461;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000461:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15324897	15327303	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000461;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000461:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327304	15327452	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000461;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000461:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15327453	15327942	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000461;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000461:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327943	15328155	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000461;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000461:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15328156	15345455	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000461;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000461:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15345456	15345661	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000461;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000461:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15345662	15346501	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000461;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000461:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15346502	15346607	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000461;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000461:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15346608	15348121	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000461;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000461:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15348122	15348251	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000461;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000461:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15348252	15376903	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000461;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000461:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15376904	15377299	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000461;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000461:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377300	15377823	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000461;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000461:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15377824	15377919	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000461;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000461:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377920	15379777	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000461;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000461:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15379778	15379870	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000461;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000461:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15379871	15381667	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000461;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000461:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15381668	15381887	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000461;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000461:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15381888	15382330	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000461;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000461:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15382331	15382429	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000461;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000461:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15382430	15388167	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000461;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000461:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15388168	15388294	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000461;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000461:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15388295	15391156	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000461;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000461:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15391157	15391250	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000461;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000461:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15391251	15415763	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000461;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000461:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15415764	15415798	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000461;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000461:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15415799	15418822	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000461;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000461:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15418823	15418877	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000461;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000461:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15418878	15432897	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000461;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000461:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15432898	15433018	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000461;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000461:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15433019	15436639	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000461;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000461:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15436640	15436698	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000461;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000461:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15436699	15470908	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000461;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000461:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15470909	15470958	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000461;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000461:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15470959	15492012	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000461;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000461:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15492013	15492121	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000461;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000461:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15492122	15501145	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000461;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000461:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501146	15501209	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000461;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000461:24;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15501210	15501405	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000461;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000461:24;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501406	15502562	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000461;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000461:25;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	15270284	15502562	1000	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000462;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_G0000167;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03009_ch_T0000462;Name=UTY
HG03009_chrY	CAT	exon	15270284	15271787	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000462;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000462:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15271788	15272921	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000462;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000462:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15272922	15273092	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000462;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000462:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15273093	15282182	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000462;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000462:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15282183	15282309	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000462;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000462:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15282310	15319611	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000462;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000462:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15319612	15319753	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000462;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000462:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15319754	15324781	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000462;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000462:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15324782	15324896	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000462;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000462:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15324897	15327303	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000462;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000462:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327304	15327452	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000462;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000462:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15327453	15327942	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000462;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000462:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327943	15328155	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000462;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000462:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15328156	15345455	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000462;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000462:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15345456	15345661	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000462;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000462:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15345662	15346501	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000462;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000462:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15346502	15346607	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000462;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000462:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15346608	15348121	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000462;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000462:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15348122	15348251	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000462;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000462:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15348252	15357463	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000462;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000462:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15357464	15357701	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000462;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000462:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15357702	15376903	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000462;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000462:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15376904	15377299	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000462;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000462:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377300	15377823	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000462;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000462:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15377824	15377919	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000462;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000462:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377920	15379777	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000462;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000462:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15379778	15379870	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000462;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000462:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15379871	15381667	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000462;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000462:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15381668	15381887	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000462;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000462:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15381888	15382330	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000462;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000462:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15382331	15382429	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000462;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000462:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15382430	15388167	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000462;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000462:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15388168	15388294	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000462;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000462:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15388295	15391156	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000462;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000462:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15391157	15391250	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000462;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000462:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15391251	15418822	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000462;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000462:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15418823	15418877	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000462;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000462:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15418878	15432897	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000462;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000462:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15432898	15433018	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000462;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000462:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15433019	15436639	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000462;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000462:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15436640	15436698	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000462;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000462:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15436699	15470908	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000462;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000462:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15470909	15470958	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000462;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000462:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15470959	15492012	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000462;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000462:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15492013	15492121	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000462;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000462:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15492122	15501145	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000462;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000462:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501146	15501209	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000462;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000462:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15501210	15501405	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000462;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000462:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501406	15502562	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000462;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000462:24;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	15270284	15502562	1000	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000463;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_G0000167;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03009_ch_T0000463;Name=UTY
HG03009_chrY	CAT	exon	15270284	15271787	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000463;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000463:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15271788	15272906	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000463;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000463:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15272907	15273092	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000463;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000463:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15273093	15282182	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000463;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000463:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15282183	15282309	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000463;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000463:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15282310	15319611	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000463;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000463:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15319612	15319753	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000463;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000463:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15319754	15320861	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000463;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000463:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15320862	15321049	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000463;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000463:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15321050	15324781	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000463;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000463:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15324782	15324896	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000463;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000463:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15324897	15327303	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000463;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000463:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327304	15327452	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000463;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000463:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15327453	15327942	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000463;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000463:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327943	15328155	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000463;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000463:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15328156	15345455	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000463;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000463:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15345456	15345661	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000463;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000463:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15345662	15346501	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000463;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000463:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15346502	15346607	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000463;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000463:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15346608	15348121	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000463;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000463:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15348122	15348251	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000463;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000463:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15348252	15376686	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000463;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000463:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15376687	15376734	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000463;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000463:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15376735	15376903	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000463;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000463:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15376904	15377299	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000463;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000463:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377300	15377823	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000463;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000463:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15377824	15377919	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000463;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000463:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377920	15379777	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000463;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000463:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15379778	15379870	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000463;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000463:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15379871	15381667	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000463;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000463:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15381668	15381887	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000463;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000463:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15381888	15382330	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000463;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000463:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15382331	15382429	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000463;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000463:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15382430	15388167	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000463;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000463:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15388168	15388294	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000463;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000463:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15388295	15391156	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000463;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000463:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15391157	15391250	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000463;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000463:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15391251	15415763	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000463;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000463:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15415764	15415798	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000463;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000463:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15415799	15418822	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000463;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000463:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15418823	15418877	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000463;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000463:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15418878	15432897	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000463;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000463:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15432898	15433018	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000463;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000463:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15433019	15436639	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000463;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000463:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15436640	15436698	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000463;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000463:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15436699	15470908	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000463;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000463:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15470909	15470958	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000463;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000463:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15470959	15492012	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000463;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000463:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15492013	15492121	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000463;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000463:24;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15492122	15501145	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000463;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000463:24;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501146	15501209	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000463;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000463:25;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15501210	15501405	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000463;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000463:25;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501406	15502562	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000463;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000463:26;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	15270284	15502562	1000	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000464;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_G0000167;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03009_ch_T0000464;Name=UTY
HG03009_chrY	CAT	exon	15270284	15271787	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000464;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000464:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15271788	15272921	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000464;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000464:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15272922	15273092	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000464;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000464:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15273093	15282182	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000464;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000464:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15282183	15282309	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000464;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000464:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15282310	15319611	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000464;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000464:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15319612	15319753	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000464;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000464:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15319754	15320861	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000464;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000464:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15320862	15321049	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000464;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000464:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15321050	15324781	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000464;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000464:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15324782	15324896	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000464;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000464:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15324897	15327303	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000464;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000464:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327304	15327452	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000464;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000464:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15327453	15327942	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000464;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000464:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327943	15328155	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000464;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000464:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15328156	15345002	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000464;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000464:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15345003	15345269	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000464;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000464:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15345270	15345455	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000464;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000464:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15345456	15345661	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000464;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000464:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15345662	15346501	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000464;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000464:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15346502	15346607	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000464;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000464:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15346608	15348121	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000464;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000464:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15348122	15348251	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000464;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000464:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15348252	15376903	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000464;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000464:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15376904	15377299	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000464;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000464:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377300	15377823	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000464;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000464:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15377824	15377919	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000464;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000464:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377920	15379777	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000464;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000464:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15379778	15379870	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000464;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000464:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15379871	15381667	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000464;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000464:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15381668	15381887	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000464;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000464:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15381888	15382330	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000464;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000464:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15382331	15382429	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000464;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000464:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15382430	15388167	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000464;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000464:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15388168	15388294	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000464;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000464:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15388295	15391156	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000464;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000464:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15391157	15391250	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000464;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000464:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15391251	15415763	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000464;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000464:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15415764	15415798	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000464;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000464:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15415799	15418822	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000464;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000464:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15418823	15418877	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000464;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000464:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15418878	15432897	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000464;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000464:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15432898	15433018	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000464;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000464:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15433019	15436639	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000464;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000464:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15436640	15436698	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000464;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000464:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15436699	15470908	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000464;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000464:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15470909	15470958	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000464;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000464:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15470959	15492012	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000464;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000464:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15492013	15492121	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000464;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000464:24;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15492122	15501145	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000464;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000464:24;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501146	15501209	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000464;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000464:25;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15501210	15501405	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000464;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000464:25;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501406	15502562	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000464;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000464:26;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	15270284	15502562	1000	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000465;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_G0000167;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03009_ch_T0000465;Name=UTY
HG03009_chrY	CAT	exon	15270284	15271787	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000465;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000465:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15271788	15272921	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000465;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000465:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15272922	15273092	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000465;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000465:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15273093	15282182	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000465;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000465:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15282183	15282309	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000465;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000465:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15282310	15319611	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000465;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000465:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15319612	15319753	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000465;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000465:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15319754	15320861	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000465;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000465:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15320862	15321049	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000465;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000465:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15321050	15321881	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000465;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000465:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15321882	15321973	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000465;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000465:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15321974	15324781	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000465;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000465:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15324782	15324896	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000465;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000465:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15324897	15327303	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000465;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000465:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327304	15327452	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000465;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000465:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15327453	15327942	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000465;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000465:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327943	15328155	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000465;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000465:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15328156	15345455	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000465;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000465:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15345456	15345661	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000465;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000465:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15345662	15346501	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000465;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000465:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15346502	15346607	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000465;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000465:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15346608	15348121	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000465;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000465:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15348122	15348251	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000465;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000465:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15348252	15376903	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000465;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000465:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15376904	15377299	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000465;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000465:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377300	15377823	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000465;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000465:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15377824	15377919	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000465;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000465:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377920	15379777	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000465;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000465:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15379778	15379870	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000465;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000465:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15379871	15381667	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000465;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000465:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15381668	15381887	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000465;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000465:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15381888	15382330	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000465;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000465:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15382331	15382429	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000465;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000465:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15382430	15388167	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000465;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000465:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15388168	15388294	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000465;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000465:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15388295	15391156	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000465;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000465:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15391157	15391250	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000465;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000465:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15391251	15415763	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000465;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000465:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15415764	15415798	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000465;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000465:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15415799	15418822	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000465;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000465:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15418823	15418877	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000465;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000465:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15418878	15432897	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000465;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000465:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15432898	15433018	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000465;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000465:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15433019	15436639	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000465;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000465:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15436640	15436698	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000465;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000465:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15436699	15470908	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000465;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000465:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15470909	15470958	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000465;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000465:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15470959	15492012	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000465;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000465:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15492013	15492121	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000465;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000465:24;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15492122	15501145	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000465;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000465:24;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501146	15501209	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000465;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000465:25;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15501210	15501405	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000465;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000465:25;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501406	15502562	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000465;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000465:26;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	15270284	15502562	1000	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000466;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_G0000167;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03009_ch_T0000466;Name=UTY
HG03009_chrY	CAT	exon	15270284	15271787	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000466;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000466:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15271788	15272921	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000466;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000466:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15272922	15273092	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000466;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000466:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15273093	15282182	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000466;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000466:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15282183	15282309	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000466;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000466:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15282310	15319611	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000466;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000466:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15319612	15319753	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000466;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000466:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15319754	15320861	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000466;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000466:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15320862	15321049	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000466;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000466:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15321050	15321905	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000466;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000466:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15321906	15321973	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000466;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000466:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15321974	15324781	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000466;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000466:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15324782	15324896	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000466;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000466:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15324897	15327303	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000466;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000466:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327304	15327452	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000466;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000466:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15327453	15327942	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000466;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000466:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327943	15328155	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000466;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000466:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15328156	15345455	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000466;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000466:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15345456	15345661	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000466;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000466:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15345662	15346501	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000466;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000466:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15346502	15346607	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000466;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000466:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15346608	15348121	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000466;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000466:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15348122	15348251	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000466;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000466:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15348252	15357463	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000466;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000466:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15357464	15358236	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000466;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000466:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15358237	15377275	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000466;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000466:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15377276	15377299	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000466;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000466:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377300	15377823	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000466;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000466:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15377824	15377919	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000466;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000466:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377920	15379777	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000466;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000466:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15379778	15379870	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000466;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000466:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15379871	15381667	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000466;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000466:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15381668	15381887	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000466;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000466:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15381888	15382330	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000466;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000466:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15382331	15382429	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000466;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000466:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15382430	15388167	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000466;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000466:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15388168	15388294	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000466;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000466:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15388295	15391156	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000466;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000466:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15391157	15391250	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000466;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000466:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15391251	15415763	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000466;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000466:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15415764	15415798	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000466;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000466:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15415799	15418822	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000466;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000466:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15418823	15418877	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000466;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000466:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15418878	15432897	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000466;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000466:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15432898	15433018	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000466;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000466:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15433019	15436639	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000466;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000466:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15436640	15436698	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000466;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000466:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15436699	15461594	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000466;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000466:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15461595	15461674	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000466;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000466:24;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15461675	15470908	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000466;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000466:24;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15470909	15470958	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000466;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000466:25;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15470959	15492012	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000466;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000466:25;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15492013	15492121	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000466;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000466:26;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15492122	15501145	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000466;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000466:26;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501146	15501209	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000466;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000466:27;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15501210	15501405	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000466;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000466:27;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501406	15502562	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000466;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000466:28;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	15270284	15502562	1000	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000467;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_G0000167;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03009_ch_T0000467;Name=UTY
HG03009_chrY	CAT	exon	15270284	15271787	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000467;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000467:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15271788	15272921	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000467;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000467:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15272922	15273092	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000467;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000467:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15273093	15282182	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000467;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000467:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15282183	15282309	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000467;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000467:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15282310	15319611	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000467;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000467:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15319612	15319753	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000467;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000467:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15319754	15320861	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000467;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000467:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15320862	15321049	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000467;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000467:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15321050	15324781	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000467;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000467:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15324782	15324896	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000467;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000467:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15324897	15327303	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000467;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000467:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327304	15327452	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000467;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000467:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15327453	15327942	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000467;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000467:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327943	15328155	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000467;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000467:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15328156	15345455	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000467;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000467:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15345456	15345661	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000467;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000467:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15345662	15346501	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000467;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000467:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15346502	15346607	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000467;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000467:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15346608	15348121	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000467;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000467:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15348122	15348251	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000467;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000467:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15348252	15377275	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000467;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000467:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15377276	15377429	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000467;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000467:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377430	15377538	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000467;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000467:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15377539	15377604	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000467;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000467:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377605	15377823	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000467;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000467:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15377824	15377919	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000467;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000467:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377920	15379777	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000467;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000467:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15379778	15379870	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000467;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000467:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15379871	15380364	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000467;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000467:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15380365	15380454	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000467;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000467:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15380455	15380988	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000467;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000467:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15380989	15381123	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000467;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000467:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15381124	15381667	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000467;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000467:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15381668	15381887	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000467;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000467:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15381888	15382330	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000467;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000467:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15382331	15382429	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000467;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000467:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15382430	15388167	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000467;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000467:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15388168	15388294	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000467;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000467:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15388295	15391156	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000467;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000467:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15391157	15391250	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000467;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000467:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15391251	15415763	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000467;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000467:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15415764	15415798	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000467;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000467:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15415799	15418822	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000467;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000467:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15418823	15418877	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000467;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000467:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15418878	15432897	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000467;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000467:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15432898	15433018	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000467;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000467:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15433019	15436639	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000467;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000467:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15436640	15436698	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000467;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000467:24;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15436699	15470908	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000467;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000467:24;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15470909	15470958	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000467;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000467:25;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15470959	15492012	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000467;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000467:25;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15492013	15492121	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000467;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000467:26;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15492122	15501145	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000467;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000467:26;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501146	15501209	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000467;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000467:27;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15501210	15501405	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000467;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000467:27;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501406	15502562	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000467;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000467:28;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	15270284	15502562	1000	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000468;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_G0000167;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03009_ch_T0000468;Name=UTY
HG03009_chrY	CAT	exon	15270284	15271787	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000468;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000468:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15271788	15272921	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000468;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000468:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15272922	15273092	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000468;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000468:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15273093	15282182	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000468;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000468:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15282183	15282309	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000468;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000468:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15282310	15319611	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000468;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000468:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15319612	15319753	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000468;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000468:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15319754	15320861	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000468;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000468:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15320862	15321049	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000468;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000468:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15321050	15324781	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000468;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000468:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15324782	15324896	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000468;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000468:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15324897	15327303	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000468;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000468:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327304	15327452	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000468;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000468:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15327453	15327942	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000468;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000468:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327943	15328155	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000468;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000468:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15328156	15345455	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000468;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000468:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15345456	15345661	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000468;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000468:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15345662	15346501	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000468;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000468:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15346502	15346607	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000468;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000468:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15346608	15348243	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000468;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000468:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15348244	15348251	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000468;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000468:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15348252	15376903	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000468;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000468:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15376904	15377299	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000468;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000468:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377300	15377823	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000468;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000468:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15377824	15377919	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000468;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000468:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377920	15379777	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000468;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000468:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15379778	15379870	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000468;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000468:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15379871	15380364	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000468;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000468:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15380365	15380520	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000468;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000468:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15380521	15381667	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000468;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000468:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15381668	15381887	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000468;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000468:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15381888	15382330	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000468;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000468:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15382331	15382429	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000468;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000468:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15382430	15388167	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000468;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000468:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15388168	15388294	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000468;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000468:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15388295	15391156	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000468;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000468:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15391157	15391250	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000468;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000468:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15391251	15418822	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000468;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000468:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15418823	15418877	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000468;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000468:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15418878	15432897	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000468;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000468:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15432898	15433018	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000468;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000468:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15433019	15436639	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000468;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000468:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15436640	15436698	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000468;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000468:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15436699	15470908	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000468;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000468:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15470909	15470958	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000468;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000468:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15470959	15492012	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000468;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000468:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15492013	15492121	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000468;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000468:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15492122	15501145	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000468;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000468:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501146	15501209	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000468;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000468:24;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15501210	15501405	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000468;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000468:24;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501406	15502562	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000468;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000468:25;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	15270284	15502562	1000	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000469;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_G0000167;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03009_ch_T0000469;Name=UTY
HG03009_chrY	CAT	exon	15270284	15271787	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000469;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000469:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15271788	15282182	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000469;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000469:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15282183	15282309	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000469;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000469:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15282310	15319611	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000469;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000469:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15319612	15319753	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000469;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000469:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15319754	15320861	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000469;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000469:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15320862	15321049	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000469;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000469:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15321050	15324781	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000469;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000469:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15324782	15324896	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000469;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000469:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15324897	15327303	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000469;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000469:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327304	15327452	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000469;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000469:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15327453	15327942	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000469;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000469:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327943	15328155	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000469;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000469:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15328156	15345455	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000469;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000469:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15345456	15345661	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000469;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000469:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15345662	15346501	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000469;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000469:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15346502	15346607	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000469;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000469:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15346608	15348121	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000469;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000469:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15348122	15348251	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000469;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000469:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15348252	15357463	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000469;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000469:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15357464	15358236	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000469;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000469:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15358237	15376903	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000469;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000469:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15376904	15377299	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000469;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000469:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377300	15377823	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000469;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000469:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15377824	15377919	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000469;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000469:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377920	15379777	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000469;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000469:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15379778	15379870	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000469;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000469:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15379871	15381667	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000469;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000469:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15381668	15381887	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000469;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000469:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15381888	15382330	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000469;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000469:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15382331	15382429	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000469;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000469:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15382430	15388167	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000469;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000469:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15388168	15388294	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000469;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000469:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15388295	15391161	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000469;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000469:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15391162	15391250	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000469;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000469:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15391251	15415763	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000469;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000469:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15415764	15415798	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000469;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000469:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15415799	15418822	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000469;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000469:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15418823	15418877	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000469;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000469:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15418878	15432897	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000469;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000469:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15432898	15433018	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000469;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000469:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15433019	15436639	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000469;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000469:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15436640	15436698	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000469;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000469:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15436699	15470908	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000469;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000469:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15470909	15470958	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000469;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000469:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15470959	15492012	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000469;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000469:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15492013	15492121	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000469;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000469:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15492122	15501145	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000469;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000469:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501146	15501209	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000469;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000469:24;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15501210	15501405	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000469;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000469:24;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501406	15502562	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000469;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000469:25;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	15270284	15502562	1000	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000470;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_G0000167;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03009_ch_T0000470;Name=UTY
HG03009_chrY	CAT	exon	15270284	15271787	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000470;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000470:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15271788	15272921	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000470;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000470:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15272922	15273092	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000470;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000470:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15273093	15282182	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000470;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000470:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15282183	15282309	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000470;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000470:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15282310	15319611	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000470;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000470:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15319612	15319753	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000470;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000470:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15319754	15320861	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000470;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000470:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15320862	15321049	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000470;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000470:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15321050	15324781	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000470;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000470:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15324782	15324896	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000470;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000470:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15324897	15327303	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000470;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000470:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327304	15327452	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000470;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000470:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15327453	15327942	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000470;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000470:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327943	15328155	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000470;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000470:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15328156	15345455	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000470;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000470:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15345456	15345661	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000470;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000470:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15345662	15346501	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000470;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000470:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15346502	15346607	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000470;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000470:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15346608	15348121	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000470;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000470:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15348122	15348251	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000470;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000470:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15348252	15376686	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000470;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000470:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15376687	15376734	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000470;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000470:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15376735	15376903	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000470;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000470:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15376904	15377299	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000470;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000470:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377300	15377823	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000470;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000470:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15377824	15377919	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000470;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000470:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377920	15379777	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000470;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000470:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15379778	15379870	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000470;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000470:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15379871	15380364	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000470;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000470:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15380365	15380454	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000470;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000470:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15380455	15381667	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000470;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000470:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15381668	15381887	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000470;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000470:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15381888	15382330	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000470;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000470:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15382331	15382429	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000470;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000470:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15382430	15388167	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000470;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000470:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15388168	15388294	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000470;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000470:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15388295	15391156	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000470;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000470:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15391157	15391250	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000470;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000470:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15391251	15415763	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000470;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000470:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15415764	15415798	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000470;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000470:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15415799	15418822	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000470;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000470:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15418823	15418877	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000470;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000470:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15418878	15432897	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000470;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000470:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15432898	15433018	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000470;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000470:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15433019	15436639	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000470;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000470:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15436640	15436698	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000470;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000470:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15436699	15470908	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000470;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000470:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15470909	15470958	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000470;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000470:24;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15470959	15492012	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000470;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000470:24;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15492013	15492121	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000470;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000470:25;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15492122	15501145	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000470;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000470:25;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501146	15501209	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000470;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000470:26;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15501210	15501405	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000470;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000470:26;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501406	15502562	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000470;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000470:27;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	15270284	15502562	1000	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000471;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_G0000167;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03009_ch_T0000471;Name=UTY
HG03009_chrY	CAT	exon	15270284	15271787	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000471;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000471:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15271788	15272906	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000471;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000471:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15272907	15273092	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000471;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000471:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15273093	15282182	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000471;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000471:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15282183	15282309	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000471;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000471:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15282310	15319611	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000471;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000471:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15319612	15319753	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000471;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000471:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15319754	15320861	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000471;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000471:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15320862	15321049	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000471;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000471:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15321050	15324781	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000471;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000471:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15324782	15324896	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000471;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000471:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15324897	15327303	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000471;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000471:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327304	15327452	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000471;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000471:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15327453	15327942	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000471;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000471:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327943	15328155	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000471;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000471:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15328156	15345455	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000471;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000471:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15345456	15345661	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000471;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000471:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15345662	15346501	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000471;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000471:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15346502	15346607	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000471;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000471:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15346608	15348121	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000471;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000471:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15348122	15348251	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000471;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000471:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15348252	15357463	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000471;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000471:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15357464	15358236	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000471;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000471:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15358237	15376903	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000471;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000471:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15376904	15377299	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000471;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000471:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377300	15377823	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000471;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000471:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15377824	15377919	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000471;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000471:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377920	15379777	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000471;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000471:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15379778	15379870	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000471;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000471:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15379871	15380364	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000471;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000471:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15380365	15380422	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000471;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000471:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15380423	15381667	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000471;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000471:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15381668	15381887	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000471;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000471:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15381888	15382330	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000471;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000471:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15382331	15382429	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000471;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000471:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15382430	15388167	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000471;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000471:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15388168	15388294	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000471;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000471:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15388295	15391156	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000471;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000471:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15391157	15391250	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000471;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000471:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15391251	15415763	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000471;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000471:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15415764	15415798	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000471;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000471:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15415799	15418822	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000471;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000471:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15418823	15418877	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000471;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000471:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15418878	15432897	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000471;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000471:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15432898	15433018	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000471;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000471:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15433019	15436639	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000471;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000471:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15436640	15436698	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000471;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000471:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15436699	15470908	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000471;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000471:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15470909	15470958	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000471;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000471:24;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15470959	15492012	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000471;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000471:24;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15492013	15492121	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000471;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000471:25;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15492122	15501145	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000471;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000471:25;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501146	15501209	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000471;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000471:26;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15501210	15501405	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000471;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000471:26;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501406	15502562	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000471;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000471:27;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	15270284	15502562	1000	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000472;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_G0000167;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03009_ch_T0000472;Name=UTY
HG03009_chrY	CAT	exon	15270284	15271787	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000472;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000472:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15271788	15282182	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000472;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000472:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15282183	15282309	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000472;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000472:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15282310	15319611	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000472;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000472:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15319612	15319753	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000472;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000472:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15319754	15320861	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000472;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000472:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15320862	15321049	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000472;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000472:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15321050	15324781	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000472;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000472:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15324782	15324896	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000472;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000472:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15324897	15327303	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000472;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000472:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327304	15327452	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000472;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000472:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15327453	15327942	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000472;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000472:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327943	15328155	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000472;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000472:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15328156	15345455	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000472;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000472:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15345456	15345661	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000472;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000472:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15345662	15346501	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000472;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000472:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15346502	15346607	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000472;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000472:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15346608	15348121	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000472;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000472:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15348122	15348251	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000472;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000472:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15348252	15357463	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000472;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000472:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15357464	15358236	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000472;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000472:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15358237	15376903	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000472;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000472:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15376904	15377299	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000472;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000472:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377300	15377823	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000472;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000472:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15377824	15377919	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000472;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000472:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377920	15379777	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000472;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000472:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15379778	15379870	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000472;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000472:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15379871	15381667	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000472;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000472:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15381668	15381887	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000472;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000472:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15381888	15382330	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000472;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000472:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15382331	15382429	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000472;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000472:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15382430	15388167	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000472;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000472:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15388168	15388294	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000472;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000472:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15388295	15391161	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000472;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000472:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15391162	15391250	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000472;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000472:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15391251	15418822	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000472;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000472:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15418823	15418877	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000472;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000472:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15418878	15425687	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000472;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000472:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15425688	15425793	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000472;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000472:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15425794	15432897	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000472;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000472:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15432898	15433018	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000472;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000472:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15433019	15436639	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000472;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000472:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15436640	15436698	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000472;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000472:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15436699	15470908	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000472;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000472:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15470909	15470958	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000472;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000472:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15470959	15492012	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000472;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000472:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15492013	15492121	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000472;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000472:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15492122	15501145	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000472;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000472:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501146	15501209	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000472;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000472:24;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15501210	15501405	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000472;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000472:24;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501406	15502562	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000472;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000472:25;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	15270284	15502562	1000	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000473;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_G0000167;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03009_ch_T0000473;Name=UTY
HG03009_chrY	CAT	exon	15270284	15271787	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000473;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000473:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15271788	15272921	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000473;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000473:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15272922	15273092	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000473;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000473:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15273093	15282182	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000473;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000473:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15282183	15282309	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000473;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000473:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15282310	15319611	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000473;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000473:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15319612	15319753	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000473;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000473:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15319754	15320861	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000473;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000473:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15320862	15321049	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000473;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000473:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15321050	15324781	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000473;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000473:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15324782	15324896	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000473;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000473:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15324897	15327303	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000473;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000473:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327304	15327452	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000473;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000473:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15327453	15327942	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000473;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000473:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327943	15328155	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000473;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000473:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15328156	15345455	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000473;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000473:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15345456	15345661	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000473;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000473:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15345662	15346501	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000473;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000473:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15346502	15346607	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000473;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000473:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15346608	15348121	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000473;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000473:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15348122	15348251	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000473;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000473:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15348252	15376903	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000473;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000473:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15376904	15377299	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000473;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000473:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377300	15377823	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000473;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000473:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15377824	15377919	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000473;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000473:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377920	15379777	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000473;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000473:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15379778	15379870	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000473;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000473:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15379871	15381667	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000473;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000473:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15381668	15381887	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000473;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000473:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15381888	15382330	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000473;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000473:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15382331	15382429	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000473;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000473:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15382430	15388167	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000473;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000473:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15388168	15388294	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000473;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000473:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15388295	15415763	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000473;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000473:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15415764	15415798	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000473;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000473:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15415799	15418822	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000473;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000473:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15418823	15418877	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000473;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000473:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15418878	15432897	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000473;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000473:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15432898	15433018	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000473;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000473:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15433019	15436639	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000473;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000473:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15436640	15436698	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000473;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000473:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15436699	15470908	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000473;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000473:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15470909	15470958	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000473;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000473:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15470959	15492012	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000473;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000473:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15492013	15492121	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000473;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000473:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15492122	15501145	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000473;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000473:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501146	15501209	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000473;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000473:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15501210	15501405	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000473;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000473:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501406	15502562	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000473;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000473:24;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	15270284	15502562	1000	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000474;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_G0000167;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03009_ch_T0000474;Name=UTY
HG03009_chrY	CAT	exon	15270284	15271787	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000474;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000474:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15271788	15272921	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000474;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000474:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15272922	15273092	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000474;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000474:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15273093	15282182	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000474;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000474:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15282183	15282309	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000474;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000474:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15282310	15319611	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000474;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000474:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15319612	15319753	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000474;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000474:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15319754	15320861	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000474;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000474:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15320862	15321049	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000474;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000474:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15321050	15324781	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000474;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000474:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15324782	15324896	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000474;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000474:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15324897	15327303	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000474;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000474:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327304	15327452	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000474;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000474:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15327453	15327942	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000474;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000474:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327943	15328155	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000474;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000474:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15328156	15345455	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000474;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000474:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15345456	15345661	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000474;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000474:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15345662	15346501	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000474;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000474:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15346502	15346607	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000474;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000474:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15346608	15348243	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000474;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000474:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15348244	15348251	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000474;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000474:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15348252	15376903	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000474;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000474:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15376904	15377299	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000474;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000474:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377300	15377823	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000474;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000474:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15377824	15377919	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000474;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000474:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377920	15379777	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000474;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000474:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15379778	15379870	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000474;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000474:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15379871	15381667	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000474;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000474:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15381668	15381887	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000474;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000474:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15381888	15382330	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000474;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000474:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15382331	15382429	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000474;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000474:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15382430	15388167	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000474;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000474:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15388168	15388294	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000474;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000474:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15388295	15391156	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000474;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000474:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15391157	15391250	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000474;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000474:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15391251	15415763	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000474;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000474:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15415764	15415798	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000474;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000474:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15415799	15418822	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000474;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000474:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15418823	15418877	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000474;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000474:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15418878	15425687	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000474;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000474:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15425688	15425793	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000474;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000474:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15425794	15432897	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000474;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000474:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15432898	15433018	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000474;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000474:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15433019	15436639	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000474;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000474:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15436640	15436698	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000474;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000474:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15436699	15470908	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000474;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000474:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15470909	15470958	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000474;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000474:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15470959	15492012	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000474;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000474:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15492013	15492121	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000474;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000474:24;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15492122	15501145	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000474;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000474:24;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501146	15501209	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000474;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000474:25;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15501210	15501405	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000474;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000474:25;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501406	15502562	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000474;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000474:26;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	15270284	15502562	1000	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000475;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_G0000167;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03009_ch_T0000475;Name=UTY
HG03009_chrY	CAT	exon	15270284	15271787	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000475;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000475:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15271788	15272921	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000475;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000475:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15272922	15273092	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000475;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000475:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15273093	15282182	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000475;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000475:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15282183	15282309	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000475;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000475:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15282310	15319611	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000475;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000475:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15319612	15319753	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000475;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000475:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15319754	15320861	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000475;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000475:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15320862	15321049	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000475;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000475:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15321050	15324781	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000475;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000475:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15324782	15324896	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000475;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000475:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15324897	15327303	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000475;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000475:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327304	15327452	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000475;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000475:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15327453	15327557	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000475;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000475:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327558	15327625	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000475;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000475:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15327626	15327942	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000475;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000475:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327943	15328155	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000475;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000475:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15328156	15345455	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000475;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000475:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15345456	15345661	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000475;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000475:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15345662	15346501	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000475;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000475:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15346502	15346607	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000475;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000475:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15346608	15348121	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000475;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000475:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15348122	15348251	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000475;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000475:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15348252	15357463	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000475;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000475:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15357464	15358236	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000475;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000475:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15358237	15376903	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000475;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000475:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15376904	15377299	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000475;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000475:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377300	15377823	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000475;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000475:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15377824	15377919	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000475;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000475:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377920	15379777	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000475;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000475:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15379778	15379870	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000475;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000475:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15379871	15381667	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000475;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000475:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15381668	15381887	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000475;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000475:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15381888	15382330	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000475;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000475:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15382331	15382429	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000475;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000475:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15382430	15388167	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000475;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000475:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15388168	15388294	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000475;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000475:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15388295	15391156	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000475;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000475:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15391157	15391250	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000475;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000475:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15391251	15415763	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000475;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000475:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15415764	15415798	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000475;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000475:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15415799	15418822	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000475;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000475:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15418823	15418877	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000475;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000475:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15418878	15432897	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000475;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000475:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15432898	15433018	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000475;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000475:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15433019	15436639	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000475;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000475:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15436640	15436698	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000475;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000475:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15436699	15470908	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000475;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000475:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15470909	15470958	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000475;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000475:24;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15470959	15492012	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000475;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000475:24;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15492013	15492121	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000475;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000475:25;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15492122	15501145	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000475;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000475:25;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501146	15501209	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000475;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000475:26;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15501210	15501405	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000475;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000475:26;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501406	15502562	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000475;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000475:27;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	15270284	15502562	1000	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000476;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_G0000167;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03009_ch_T0000476;Name=UTY
HG03009_chrY	CAT	exon	15270284	15271787	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000476;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000476:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15271788	15272921	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000476;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000476:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15272922	15273092	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000476;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000476:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15273093	15282182	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000476;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000476:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15282183	15282309	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000476;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000476:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15282310	15300145	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000476;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000476:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15300146	15300250	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000476;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000476:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15300251	15319611	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000476;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000476:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15319612	15319753	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000476;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000476:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15319754	15320861	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000476;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000476:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15320862	15321049	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000476;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000476:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15321050	15324781	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000476;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000476:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15324782	15324896	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000476;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000476:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15324897	15327303	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000476;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000476:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327304	15327452	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000476;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000476:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15327453	15327942	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000476;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000476:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327943	15328155	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000476;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000476:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15328156	15345455	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000476;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000476:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15345456	15345661	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000476;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000476:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15345662	15346501	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000476;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000476:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15346502	15346607	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000476;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000476:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15346608	15348121	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000476;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000476:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15348122	15348251	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000476;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000476:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15348252	15357463	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000476;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000476:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15357464	15358236	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000476;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000476:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15358237	15376903	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000476;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000476:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15376904	15377299	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000476;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000476:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377300	15377823	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000476;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000476:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15377824	15377919	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000476;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000476:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377920	15379777	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000476;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000476:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15379778	15379870	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000476;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000476:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15379871	15381667	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000476;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000476:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15381668	15381887	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000476;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000476:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15381888	15382330	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000476;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000476:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15382331	15382429	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000476;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000476:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15382430	15388167	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000476;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000476:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15388168	15388294	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000476;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000476:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15388295	15391156	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000476;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000476:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15391157	15391250	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000476;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000476:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15391251	15415763	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000476;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000476:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15415764	15415798	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000476;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000476:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15415799	15418822	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000476;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000476:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15418823	15418877	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000476;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000476:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15418878	15432897	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000476;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000476:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15432898	15433018	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000476;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000476:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15433019	15436639	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000476;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000476:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15436640	15436698	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000476;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000476:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15436699	15470908	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000476;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000476:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15470909	15470958	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000476;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000476:24;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15470959	15492012	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000476;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000476:24;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15492013	15492121	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000476;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000476:25;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15492122	15501145	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000476;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000476:25;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501146	15501209	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000476;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000476:26;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15501210	15501405	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000476;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000476:26;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501406	15502562	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000476;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000476:27;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	15270284	15502562	1000	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000477;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_G0000167;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03009_ch_T0000477;Name=UTY
HG03009_chrY	CAT	exon	15270284	15271787	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000477;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000477:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15271788	15272921	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000477;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000477:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15272922	15273092	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000477;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000477:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15273093	15282182	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000477;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000477:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15282183	15282309	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000477;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000477:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15282310	15319611	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000477;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000477:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15319612	15319753	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000477;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000477:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15319754	15320861	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000477;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000477:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15320862	15321049	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000477;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000477:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15321050	15324781	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000477;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000477:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15324782	15324896	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000477;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000477:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15324897	15327303	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000477;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000477:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327304	15327452	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000477;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000477:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15327453	15327942	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000477;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000477:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327943	15328155	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000477;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000477:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15328156	15345455	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000477;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000477:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15345456	15345661	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000477;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000477:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15345662	15346501	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000477;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000477:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15346502	15346607	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000477;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000477:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15346608	15348121	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000477;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000477:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15348122	15348251	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000477;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000477:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15348252	15357463	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000477;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000477:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15357464	15357701	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000477;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000477:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15357702	15376903	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000477;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000477:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15376904	15377299	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000477;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000477:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377300	15377823	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000477;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000477:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15377824	15377919	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000477;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000477:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377920	15379777	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000477;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000477:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15379778	15379870	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000477;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000477:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15379871	15380988	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000477;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000477:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15380989	15381123	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000477;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000477:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15381124	15381667	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000477;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000477:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15381668	15381887	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000477;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000477:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15381888	15382330	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000477;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000477:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15382331	15382429	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000477;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000477:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15382430	15388167	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000477;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000477:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15388168	15388294	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000477;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000477:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15388295	15391156	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000477;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000477:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15391157	15391250	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000477;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000477:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15391251	15415763	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000477;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000477:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15415764	15415798	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000477;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000477:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15415799	15418822	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000477;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000477:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15418823	15418877	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000477;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000477:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15418878	15432897	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000477;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000477:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15432898	15433018	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000477;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000477:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15433019	15436639	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000477;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000477:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15436640	15436698	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000477;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000477:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15436699	15470908	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000477;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000477:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15470909	15470958	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000477;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000477:24;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15470959	15492012	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000477;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000477:24;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15492013	15492121	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000477;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000477:25;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15492122	15501145	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000477;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000477:25;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501146	15501209	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000477;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000477:26;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15501210	15501405	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000477;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000477:26;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501406	15502562	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000477;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000477:27;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	15270284	15502562	1000	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000478;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_G0000167;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03009_ch_T0000478;Name=UTY
HG03009_chrY	CAT	exon	15270284	15271787	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000478;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000478:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15271788	15272921	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000478;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000478:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15272922	15273092	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000478;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000478:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15273093	15282182	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000478;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000478:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15282183	15282309	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000478;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000478:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15282310	15319611	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000478;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000478:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15319612	15319753	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000478;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000478:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15319754	15320861	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000478;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000478:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15320862	15321049	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000478;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000478:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15321050	15324781	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000478;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000478:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15324782	15324896	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000478;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000478:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15324897	15327303	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000478;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000478:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327304	15327452	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000478;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000478:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15327453	15327942	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000478;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000478:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327943	15328155	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000478;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000478:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15328156	15345455	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000478;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000478:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15345456	15345661	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000478;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000478:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15345662	15346501	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000478;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000478:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15346502	15346607	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000478;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000478:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15346608	15348121	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000478;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000478:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15348122	15348251	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000478;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000478:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15348252	15357463	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000478;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000478:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15357464	15358236	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000478;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000478:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15358237	15376903	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000478;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000478:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15376904	15377299	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000478;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000478:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377300	15377823	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000478;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000478:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15377824	15377919	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000478;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000478:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377920	15379777	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000478;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000478:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15379778	15379870	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000478;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000478:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15379871	15380364	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000478;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000478:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15380365	15380422	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000478;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000478:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15380423	15380988	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000478;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000478:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15380989	15381123	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000478;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000478:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15381124	15381667	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000478;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000478:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15381668	15381887	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000478;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000478:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15381888	15382330	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000478;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000478:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15382331	15382429	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000478;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000478:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15382430	15388167	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000478;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000478:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15388168	15388294	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000478;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000478:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15388295	15391156	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000478;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000478:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15391157	15391250	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000478;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000478:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15391251	15415763	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000478;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000478:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15415764	15415798	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000478;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000478:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15415799	15418822	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000478;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000478:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15418823	15418877	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000478;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000478:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15418878	15432897	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000478;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000478:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15432898	15433018	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000478;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000478:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15433019	15436639	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000478;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000478:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15436640	15436698	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000478;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000478:24;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15436699	15470908	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000478;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000478:24;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15470909	15470958	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000478;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000478:25;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15470959	15492012	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000478;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000478:25;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15492013	15492121	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000478;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000478:26;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15492122	15501145	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000478;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000478:26;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501146	15501209	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000478;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000478:27;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15501210	15501405	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000478;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000478:27;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501406	15502562	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000478;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000478:28;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	15270284	15502562	1000	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000479;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_G0000167;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03009_ch_T0000479;Name=UTY
HG03009_chrY	CAT	exon	15270284	15271787	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000479;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000479:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15271788	15272921	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000479;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000479:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15272922	15273092	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000479;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000479:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15273093	15282182	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000479;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000479:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15282183	15282309	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000479;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000479:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15282310	15319611	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000479;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000479:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15319612	15319753	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000479;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000479:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15319754	15320861	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000479;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000479:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15320862	15321049	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000479;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000479:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15321050	15324781	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000479;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000479:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15324782	15324896	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000479;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000479:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15324897	15327303	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000479;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000479:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327304	15327452	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000479;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000479:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15327453	15327942	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000479;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000479:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327943	15328155	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000479;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000479:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15328156	15345455	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000479;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000479:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15345456	15345661	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000479;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000479:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15345662	15346501	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000479;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000479:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15346502	15346607	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000479;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000479:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15346608	15348121	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000479;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000479:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15348122	15348251	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000479;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000479:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15348252	15357463	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000479;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000479:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15357464	15358236	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000479;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000479:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15358237	15376903	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000479;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000479:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15376904	15377299	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000479;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000479:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377300	15377823	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000479;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000479:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15377824	15377919	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000479;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000479:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377920	15379777	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000479;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000479:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15379778	15379870	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000479;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000479:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15379871	15380988	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000479;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000479:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15380989	15381123	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000479;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000479:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15381124	15381667	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000479;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000479:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15381668	15381887	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000479;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000479:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15381888	15382330	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000479;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000479:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15382331	15382429	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000479;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000479:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15382430	15388167	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000479;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000479:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15388168	15388294	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000479;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000479:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15388295	15391156	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000479;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000479:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15391157	15391250	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000479;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000479:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15391251	15418822	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000479;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000479:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15418823	15418877	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000479;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000479:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15418878	15425687	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000479;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000479:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15425688	15425793	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000479;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000479:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15425794	15432897	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000479;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000479:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15432898	15433018	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000479;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000479:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15433019	15436639	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000479;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000479:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15436640	15436698	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000479;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000479:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15436699	15470908	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000479;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000479:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15470909	15470958	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000479;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000479:24;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15470959	15492012	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000479;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000479:24;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15492013	15492121	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000479;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000479:25;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15492122	15501145	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000479;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000479:25;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501146	15501209	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000479;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000479:26;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15501210	15501405	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000479;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000479:26;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501406	15502562	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000479;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000479:27;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	15270284	15502562	1000	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000480;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_G0000167;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03009_ch_T0000480;Name=UTY
HG03009_chrY	CAT	exon	15270284	15271787	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000480;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000480:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15271788	15272921	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000480;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000480:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15272922	15273092	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000480;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000480:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15273093	15282182	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000480;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000480:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15282183	15282309	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000480;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000480:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15282310	15319611	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000480;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000480:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15319612	15319753	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000480;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000480:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15319754	15320861	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000480;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000480:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15320862	15321049	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000480;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000480:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15321050	15324781	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000480;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000480:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15324782	15324896	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000480;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000480:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15324897	15327303	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000480;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000480:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327304	15327452	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000480;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000480:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15327453	15327942	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000480;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000480:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327943	15328155	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000480;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000480:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15328156	15345455	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000480;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000480:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15345456	15345661	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000480;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000480:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15345662	15346501	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000480;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000480:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15346502	15346607	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000480;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000480:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15346608	15348121	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000480;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000480:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15348122	15348251	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000480;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000480:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15348252	15357463	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000480;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000480:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15357464	15358236	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000480;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000480:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15358237	15376903	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000480;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000480:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15376904	15377299	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000480;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000480:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377300	15377823	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000480;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000480:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15377824	15377919	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000480;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000480:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377920	15379777	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000480;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000480:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15379778	15379870	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000480;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000480:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15379871	15381667	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000480;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000480:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15381668	15381887	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000480;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000480:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15381888	15382330	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000480;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000480:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15382331	15382429	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000480;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000480:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15382430	15391156	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000480;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000480:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15391157	15391250	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000480;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000480:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15391251	15415763	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000480;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000480:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15415764	15415798	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000480;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000480:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15415799	15418822	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000480;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000480:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15418823	15418877	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000480;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000480:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15418878	15432897	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000480;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000480:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15432898	15433018	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000480;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000480:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15433019	15436639	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000480;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000480:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15436640	15436698	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000480;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000480:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15436699	15470908	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000480;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000480:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15470909	15470958	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000480;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000480:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15470959	15492012	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000480;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000480:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15492013	15492121	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000480;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000480:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15492122	15501145	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000480;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000480:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501146	15501209	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000480;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000480:24;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15501210	15501405	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000480;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000480:24;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501406	15502562	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000480;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000480:25;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	15270284	15502562	1000	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000481;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_G0000167;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03009_ch_T0000481;Name=UTY
HG03009_chrY	CAT	exon	15270284	15271787	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000481;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000481;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000481:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15271788	15272921	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000481;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000481;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000481:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15272922	15273092	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000481;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000481;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000481:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15273093	15282182	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000481;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000481;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000481:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15282183	15282309	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000481;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000481;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000481:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15282310	15319611	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000481;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000481;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000481:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15319612	15319753	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000481;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000481;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000481:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15319754	15320861	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000481;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000481;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000481:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15320862	15321049	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000481;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000481;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000481:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15321050	15324781	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000481;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000481;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000481:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15324782	15324896	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000481;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000481;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000481:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15324897	15327303	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000481;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000481;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000481:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327304	15327452	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000481;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000481;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000481:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15327453	15327942	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000481;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000481;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000481:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327943	15328155	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000481;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000481;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000481:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15328156	15345455	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000481;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000481;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000481:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15345456	15345661	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000481;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000481;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000481:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15345662	15346501	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000481;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000481;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000481:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15346502	15346607	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000481;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000481;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000481:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15346608	15348121	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000481;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000481;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000481:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15348122	15348251	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000481;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000481;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000481:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15348252	15357463	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000481;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000481;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000481:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15357464	15358236	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000481;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000481;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000481:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15358237	15376903	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000481;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000481;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000481:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15376904	15377299	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000481;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000481;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000481:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377300	15377823	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000481;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000481;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000481:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15377824	15377919	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000481;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000481;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000481:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377920	15379777	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000481;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000481;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000481:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15379778	15379870	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000481;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000481;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000481:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15379871	15381667	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000481;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000481;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000481:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15381668	15381844	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000481;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000481;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000481:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15381845	15382330	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000481;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000481;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000481:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15382331	15382429	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000481;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000481;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000481:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15382430	15388167	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000481;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000481;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000481:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15388168	15388294	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000481;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000481;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000481:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15388295	15391156	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000481;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000481;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000481:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15391157	15391250	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000481;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000481;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000481:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15391251	15415763	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000481;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000481;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000481:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15415764	15415798	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000481;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000481;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000481:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15415799	15418822	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000481;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000481;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000481:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15418823	15418877	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000481;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000481;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000481:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15418878	15432897	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000481;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000481;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000481:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15432898	15433018	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000481;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000481;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000481:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15433019	15436639	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000481;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000481;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000481:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15436640	15436698	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000481;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000481;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000481:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15436699	15470908	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000481;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000481;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000481:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15470909	15470958	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000481;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000481;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000481:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15470959	15492012	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000481;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000481;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000481:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15492013	15492121	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000481;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000481;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000481:24;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15492122	15501145	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000481;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000481;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000481:24;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501146	15501209	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000481;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000481;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000481:25;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15501210	15501405	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000481;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000481;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000481:25;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501406	15502562	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000481;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000481;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000481:26;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	15319414	15501925	1000	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000482;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_G0000167;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03009_ch_T0000482;Name=UTY
HG03009_chrY	CAT	exon	15319414	15319753	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000482;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000482;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000482:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15319754	15320861	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000482;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000482;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000482:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15320862	15321049	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000482;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000482;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000482:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15321050	15321881	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000482;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000482;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000482:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15321882	15321973	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000482;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000482;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000482:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15321974	15324781	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000482;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000482;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000482:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15324782	15324896	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000482;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000482;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000482:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15324897	15327303	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000482;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000482;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000482:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327304	15327452	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000482;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000482;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000482:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15327453	15327942	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000482;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000482;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000482:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327943	15328155	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000482;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000482;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000482:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15328156	15345455	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000482;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000482;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000482:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15345456	15345661	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000482;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000482;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000482:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15345662	15346501	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000482;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000482;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000482:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15346502	15346607	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000482;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000482;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000482:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15346608	15348121	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000482;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000482;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000482:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15348122	15348251	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000482;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000482;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000482:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15348252	15357463	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000482;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000482;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000482:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15357464	15358236	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000482;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000482;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000482:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15358237	15376903	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000482;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000482;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000482:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15376904	15377299	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000482;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000482;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000482:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377300	15377823	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000482;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000482;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000482:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15377824	15377919	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000482;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000482;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000482:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377920	15379777	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000482;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000482;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000482:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15379778	15379870	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000482;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000482;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000482:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15379871	15381667	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000482;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000482;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000482:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15381668	15381887	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000482;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000482;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000482:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15381888	15382330	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000482;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000482;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000482:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15382331	15382429	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000482;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000482;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000482:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15382430	15388167	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000482;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000482;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000482:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15388168	15388294	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000482;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000482;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000482:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15388295	15391156	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000482;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000482;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000482:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15391157	15391250	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000482;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000482;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000482:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15391251	15415763	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000482;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000482;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000482:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15415764	15415798	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000482;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000482;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000482:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15415799	15418822	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000482;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000482;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000482:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15418823	15418877	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000482;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000482;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000482:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15418878	15432897	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000482;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000482;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000482:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15432898	15433018	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000482;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000482;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000482:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15433019	15436639	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000482;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000482;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000482:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15436640	15436698	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000482;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000482;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000482:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15436699	15470908	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000482;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000482;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000482:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15470909	15470958	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000482;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000482;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000482:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15470959	15492012	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000482;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000482;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000482:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15492013	15492121	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000482;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000482;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000482:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15492122	15501145	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000482;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000482;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000482:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501146	15501209	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000482;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000482;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000482:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15501210	15501405	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000482;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000482;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000482:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501406	15501925	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000482;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000482;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000482:24;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	15320995	15502562	1000	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000483;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_G0000167;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03009_ch_T0000483;Name=UTY
HG03009_chrY	CAT	exon	15320995	15321049	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000483;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000483;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000483:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15321050	15321881	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000483;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000483;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000483:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15321882	15321973	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000483;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000483;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000483:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15321974	15324781	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000483;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000483;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000483:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15324782	15324896	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000483;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000483;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000483:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15324897	15327303	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000483;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000483;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000483:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327304	15327452	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000483;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000483;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000483:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15327453	15327942	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000483;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000483;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000483:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327943	15328155	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000483;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000483;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000483:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15328156	15345455	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000483;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000483;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000483:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15345456	15345661	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000483;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000483;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000483:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15345662	15346501	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000483;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000483;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000483:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15346502	15346607	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000483;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000483;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000483:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15346608	15348121	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000483;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000483;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000483:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15348122	15348251	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000483;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000483;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000483:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15348252	15357463	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000483;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000483;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000483:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15357464	15358236	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000483;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000483;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000483:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15358237	15376686	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000483;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000483;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000483:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15376687	15376734	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000483;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000483;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000483:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15376735	15376903	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000483;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000483;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000483:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15376904	15377299	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000483;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000483;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000483:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377300	15377823	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000483;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000483;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000483:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15377824	15377919	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000483;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000483;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000483:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377920	15379777	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000483;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000483;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000483:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15379778	15379870	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000483;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000483;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000483:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15379871	15380364	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000483;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000483;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000483:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15380365	15380520	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000483;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000483;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000483:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15380521	15380988	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000483;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000483;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000483:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15380989	15381123	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000483;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000483;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000483:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15381124	15381667	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000483;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000483;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000483:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15381668	15381887	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000483;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000483;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000483:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15381888	15382330	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000483;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000483;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000483:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15382331	15382429	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000483;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000483;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000483:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15382430	15388167	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000483;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000483;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000483:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15388168	15388294	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000483;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000483;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000483:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15388295	15391156	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000483;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000483;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000483:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15391157	15391250	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000483;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000483;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000483:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15391251	15415763	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000483;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000483;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000483:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15415764	15415798	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000483;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000483;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000483:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15415799	15418822	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000483;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000483;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000483:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15418823	15418877	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000483;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000483;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000483:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15418878	15432897	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000483;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000483;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000483:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15432898	15433018	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000483;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000483;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000483:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15433019	15436639	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000483;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000483;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000483:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15436640	15436698	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000483;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000483;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000483:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15436699	15470908	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000483;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000483;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000483:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15470909	15470958	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000483;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000483;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000483:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15470959	15492012	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000483;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000483;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000483:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15492013	15492121	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000483;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000483;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000483:24;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15492122	15501145	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000483;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000483;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000483:24;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501146	15501209	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000483;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000483;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000483:25;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15501210	15501405	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000483;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000483;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000483:25;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501406	15502562	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000483;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000483;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000483:26;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	15321031	15502562	1000	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000484;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_G0000167;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03009_ch_T0000484;Name=UTY
HG03009_chrY	CAT	exon	15321031	15321049	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000484;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000484;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000484:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15321050	15321881	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000484;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000484;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000484:0;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15321882	15321973	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000484;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000484;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000484:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15321974	15324781	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000484;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000484;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000484:1;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15324782	15324896	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000484;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000484;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000484:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15324897	15327303	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000484;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000484;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000484:2;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327304	15327452	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000484;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000484;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000484:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15327453	15327942	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000484;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000484;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000484:3;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15327943	15328155	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000484;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000484;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000484:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15328156	15345455	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000484;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000484;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000484:4;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15345456	15345661	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000484;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000484;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000484:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15345662	15346501	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000484;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000484;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000484:5;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15346502	15346607	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000484;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000484;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000484:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15346608	15348121	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000484;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000484;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000484:6;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15348122	15348251	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000484;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000484;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000484:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15348252	15357463	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000484;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000484;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000484:7;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15357464	15358236	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000484;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000484;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000484:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15358237	15376903	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000484;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000484;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000484:8;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15376904	15377299	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000484;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000484;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000484:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377300	15377823	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000484;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000484;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000484:9;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15377824	15377919	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000484;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000484;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000484:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15377920	15379777	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000484;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000484;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000484:10;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15379778	15379870	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000484;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000484;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000484:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15379871	15380364	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000484;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000484;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000484:11;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15380365	15380520	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000484;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000484;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000484:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15380521	15380988	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000484;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000484;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000484:12;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15380989	15381123	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000484;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000484;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000484:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15381124	15381667	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000484;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000484;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000484:13;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15381668	15381887	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000484;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000484;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000484:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15381888	15382330	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000484;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000484;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000484:14;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15382331	15382429	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000484;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000484;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000484:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15382430	15388167	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000484;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000484;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000484:15;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15388168	15388294	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000484;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000484;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000484:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15388295	15391156	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000484;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000484;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000484:16;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15391157	15391250	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000484;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000484;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000484:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15391251	15415763	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000484;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000484;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000484:17;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15415764	15415798	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000484;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000484;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000484:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15415799	15418822	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000484;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000484;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000484:18;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15418823	15418877	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000484;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000484;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000484:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15418878	15432897	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000484;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000484;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000484:19;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15432898	15433018	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000484;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000484;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000484:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15433019	15436639	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000484;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000484;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000484:20;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15436640	15436698	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000484;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000484;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000484:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15436699	15470908	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000484;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000484;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000484:21;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15470909	15470958	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000484;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000484;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000484:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15470959	15492012	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000484;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000484;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000484:22;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15492013	15492121	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000484;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000484;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000484:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15492122	15501145	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000484;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000484;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000484:23;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501146	15501209	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000484;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000484;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000484:24;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15501210	15501405	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000484;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000484;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03009_ch_T0000484:24;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15501406	15502562	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03009_ch_T0000484;gene_id=HG03009_ch_G0000167;Parent=HG03009_ch_T0000484;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03009_ch_T0000484:25;Name=UTY;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	15501069	15501106	.	+	.	source_gene_common_name=MIR12120;source_gene=hg002_chrY_paternal_323;alternative_source_transcripts=hg002_chrY_paternal_323.1,hg002_chrY_paternal_323.1;gene_id=HG03009_ch_G0000168;gene_biotype=miRNA;gene_name=MIR12120;gene_sources=liftoff;ID=HG03009_ch_G0000168;Name=MIR12120
HG03009_chrY	CAT	transcript	15501069	15501158	1000	+	.	source_transcript=hg002_chrY_paternal_323.1;source_transcript_name=hg002_chrY_paternal_323.1;source_gene=hg002_chrY_paternal_323;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_323;gene_biotype=miRNA;transcript_biotype=primary_transcript;alignment_id=hg002_chrY_paternal_323.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_323.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR12120;alternative_source_transcripts=hg002_chrY_paternal_323.1,hg002_chrY_paternal_323.1;transcript_id=HG03009_ch_T0000485;gene_id=HG03009_ch_G0000168;Parent=HG03009_ch_G0000168;transcript_name=hg002_chrY_paternal_323.1;gene_name=MIR12120;ID=HG03009_ch_T0000485;Name=MIR12120
HG03009_chrY	CAT	exon	15501069	15501158	.	+	.	source_transcript=hg002_chrY_paternal_323.1;source_transcript_name=hg002_chrY_paternal_323.1;source_gene=hg002_chrY_paternal_323;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_323;gene_biotype=miRNA;transcript_biotype=primary_transcript;alignment_id=hg002_chrY_paternal_323.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_323.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR12120;alternative_source_transcripts=hg002_chrY_paternal_323.1,hg002_chrY_paternal_323.1;transcript_id=HG03009_ch_T0000485;gene_id=HG03009_ch_G0000168;Parent=HG03009_ch_T0000485;transcript_name=hg002_chrY_paternal_323.1;gene_name=MIR12120;ID=exon:HG03009_ch_T0000485:0;Name=MIR12120;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	15501081	15501106	1000	+	.	source_transcript=hg002_chrY_paternal_323.2;source_transcript_name=hg002_chrY_paternal_323.1;source_gene=hg002_chrY_paternal_323;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_323;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=hg002_chrY_paternal_323.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_323.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR12120;alternative_source_transcripts=hg002_chrY_paternal_323.2,hg002_chrY_paternal_323.2;transcript_id=HG03009_ch_T0000486;gene_id=HG03009_ch_G0000168;Parent=HG03009_ch_G0000168;transcript_name=hg002_chrY_paternal_323.1;gene_name=MIR12120;ID=HG03009_ch_T0000486;Name=MIR12120
HG03009_chrY	CAT	exon	15501081	15501106	.	+	.	source_transcript=hg002_chrY_paternal_323.2;source_transcript_name=hg002_chrY_paternal_323.1;source_gene=hg002_chrY_paternal_323;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_323;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=hg002_chrY_paternal_323.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_323.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR12120;alternative_source_transcripts=hg002_chrY_paternal_323.2,hg002_chrY_paternal_323.2;transcript_id=HG03009_ch_T0000486;gene_id=HG03009_ch_G0000168;Parent=HG03009_ch_T0000486;transcript_name=hg002_chrY_paternal_323.1;gene_name=MIR12120;ID=exon:HG03009_ch_T0000486:0;Name=MIR12120;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	15725714	15727839	.	+	.	source_gene_common_name=TMSB4Y;source_gene=hg002_chrY_paternal_324;alternative_source_transcripts=hg002_chrY_paternal_324.1,hg002_chrY_paternal_324.1;gene_id=HG03009_ch_G0000169;gene_biotype=protein_coding;gene_name=TMSB4Y;gene_sources=liftoff;ID=HG03009_ch_G0000169;Name=TMSB4Y
HG03009_chrY	CAT	transcript	15725714	15727839	100	+	.	source_transcript=hg002_chrY_paternal_324.1;source_transcript_name=hg002_chrY_paternal_324.1;source_gene=hg002_chrY_paternal_324;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_324;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_324.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_324.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMSB4Y;alternative_source_transcripts=hg002_chrY_paternal_324.1,hg002_chrY_paternal_324.1;transcript_id=HG03009_ch_T0000487;gene_id=HG03009_ch_G0000169;Parent=HG03009_ch_G0000169;transcript_name=hg002_chrY_paternal_324.1;gene_name=TMSB4Y;ID=HG03009_ch_T0000487;Name=TMSB4Y
HG03009_chrY	CAT	exon	15725714	15726250	.	+	.	source_transcript=hg002_chrY_paternal_324.1;source_transcript_name=hg002_chrY_paternal_324.1;source_gene=hg002_chrY_paternal_324;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_324;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_324.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_324.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMSB4Y;alternative_source_transcripts=hg002_chrY_paternal_324.1,hg002_chrY_paternal_324.1;transcript_id=HG03009_ch_T0000487;gene_id=HG03009_ch_G0000169;Parent=HG03009_ch_T0000487;transcript_name=hg002_chrY_paternal_324.1;gene_name=TMSB4Y;ID=exon:HG03009_ch_T0000487:0;Name=TMSB4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	15726151	15726250	.	+	0	source_transcript=hg002_chrY_paternal_324.1;source_transcript_name=hg002_chrY_paternal_324.1;source_gene=hg002_chrY_paternal_324;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_324;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_324.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_324.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMSB4Y;alternative_source_transcripts=hg002_chrY_paternal_324.1,hg002_chrY_paternal_324.1;transcript_id=HG03009_ch_T0000487;gene_id=HG03009_ch_G0000169;Parent=HG03009_ch_T0000487;transcript_name=hg002_chrY_paternal_324.1;gene_name=TMSB4Y;ID=CDS:HG03009_ch_T0000487:0;Name=TMSB4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	15726151	15726153	.	+	0	source_transcript=hg002_chrY_paternal_324.1;source_transcript_name=hg002_chrY_paternal_324.1;source_gene=hg002_chrY_paternal_324;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_324;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_324.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_324.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMSB4Y;alternative_source_transcripts=hg002_chrY_paternal_324.1,hg002_chrY_paternal_324.1;transcript_id=HG03009_ch_T0000487;gene_id=HG03009_ch_G0000169;Parent=HG03009_ch_T0000487;transcript_name=hg002_chrY_paternal_324.1;gene_name=TMSB4Y;ID=start_codon:HG03009_ch_T0000487;Name=TMSB4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	15726251	15727039	.	+	.	source_transcript=hg002_chrY_paternal_324.1;source_transcript_name=hg002_chrY_paternal_324.1;source_gene=hg002_chrY_paternal_324;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_324;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_324.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_324.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMSB4Y;alternative_source_transcripts=hg002_chrY_paternal_324.1,hg002_chrY_paternal_324.1;transcript_id=HG03009_ch_T0000487;gene_id=HG03009_ch_G0000169;Parent=HG03009_ch_T0000487;transcript_name=hg002_chrY_paternal_324.1;gene_name=TMSB4Y;ID=intron:HG03009_ch_T0000487:0;Name=TMSB4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	15727040	15727839	.	+	.	source_transcript=hg002_chrY_paternal_324.1;source_transcript_name=hg002_chrY_paternal_324.1;source_gene=hg002_chrY_paternal_324;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_324;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_324.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_324.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMSB4Y;alternative_source_transcripts=hg002_chrY_paternal_324.1,hg002_chrY_paternal_324.1;transcript_id=HG03009_ch_T0000487;gene_id=HG03009_ch_G0000169;Parent=HG03009_ch_T0000487;transcript_name=hg002_chrY_paternal_324.1;gene_name=TMSB4Y;ID=exon:HG03009_ch_T0000487:1;Name=TMSB4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	15727040	15727074	.	+	2	source_transcript=hg002_chrY_paternal_324.1;source_transcript_name=hg002_chrY_paternal_324.1;source_gene=hg002_chrY_paternal_324;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_324;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_324.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_324.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMSB4Y;alternative_source_transcripts=hg002_chrY_paternal_324.1,hg002_chrY_paternal_324.1;transcript_id=HG03009_ch_T0000487;gene_id=HG03009_ch_G0000169;Parent=HG03009_ch_T0000487;transcript_name=hg002_chrY_paternal_324.1;gene_name=TMSB4Y;ID=CDS:HG03009_ch_T0000487:1;Name=TMSB4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	15727072	15727074	.	+	0	source_transcript=hg002_chrY_paternal_324.1;source_transcript_name=hg002_chrY_paternal_324.1;source_gene=hg002_chrY_paternal_324;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_324;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_324.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_324.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMSB4Y;alternative_source_transcripts=hg002_chrY_paternal_324.1,hg002_chrY_paternal_324.1;transcript_id=HG03009_ch_T0000487;gene_id=HG03009_ch_G0000169;Parent=HG03009_ch_T0000487;transcript_name=hg002_chrY_paternal_324.1;gene_name=TMSB4Y;ID=stop_codon:HG03009_ch_T0000487;Name=TMSB4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	16007640	16008341	.	-	.	source_gene_common_name=VCY;source_gene=hg002_chrY_paternal_327;alternative_source_transcripts=hg002_chrY_paternal_327.1,hg002_chrY_paternal_327.1;gene_id=HG03009_ch_G0000170;gene_biotype=protein_coding;gene_name=VCY;gene_sources=liftoff,augTM;ID=HG03009_ch_G0000170;Name=VCY
HG03009_chrY	CAT	transcript	16007640	16008341	100	-	.	source_transcript=hg002_chrY_paternal_327.1;source_transcript_name=hg002_chrY_paternal_327.1;source_gene=hg002_chrY_paternal_327;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_327;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_327.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_327.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY;alternative_source_transcripts=hg002_chrY_paternal_327.1,hg002_chrY_paternal_327.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000488;gene_id=HG03009_ch_G0000170;Parent=HG03009_ch_G0000170;transcript_name=hg002_chrY_paternal_327.1;gene_name=VCY;ID=HG03009_ch_T0000488;Name=VCY
HG03009_chrY	CAT	exon	16007640	16008014	.	-	.	source_transcript=hg002_chrY_paternal_327.1;source_transcript_name=hg002_chrY_paternal_327.1;source_gene=hg002_chrY_paternal_327;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_327;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_327.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_327.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY;alternative_source_transcripts=hg002_chrY_paternal_327.1,hg002_chrY_paternal_327.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000488;gene_id=HG03009_ch_G0000170;Parent=HG03009_ch_T0000488;transcript_name=hg002_chrY_paternal_327.1;gene_name=VCY;ID=exon:HG03009_ch_T0000488:0;Name=VCY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16007739	16008014	.	-	0	source_transcript=hg002_chrY_paternal_327.1;source_transcript_name=hg002_chrY_paternal_327.1;source_gene=hg002_chrY_paternal_327;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_327;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_327.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_327.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY;alternative_source_transcripts=hg002_chrY_paternal_327.1,hg002_chrY_paternal_327.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000488;gene_id=HG03009_ch_G0000170;Parent=HG03009_ch_T0000488;transcript_name=hg002_chrY_paternal_327.1;gene_name=VCY;ID=CDS:HG03009_ch_T0000488:0;Name=VCY;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	16007739	16007741	.	-	0	source_transcript=hg002_chrY_paternal_327.1;source_transcript_name=hg002_chrY_paternal_327.1;source_gene=hg002_chrY_paternal_327;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_327;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_327.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_327.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY;alternative_source_transcripts=hg002_chrY_paternal_327.1,hg002_chrY_paternal_327.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000488;gene_id=HG03009_ch_G0000170;Parent=HG03009_ch_T0000488;transcript_name=hg002_chrY_paternal_327.1;gene_name=VCY;ID=stop_codon:HG03009_ch_T0000488;Name=VCY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16008015	16008206	.	-	.	source_transcript=hg002_chrY_paternal_327.1;source_transcript_name=hg002_chrY_paternal_327.1;source_gene=hg002_chrY_paternal_327;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_327;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_327.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_327.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY;alternative_source_transcripts=hg002_chrY_paternal_327.1,hg002_chrY_paternal_327.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000488;gene_id=HG03009_ch_G0000170;Parent=HG03009_ch_T0000488;transcript_name=hg002_chrY_paternal_327.1;gene_name=VCY;ID=intron:HG03009_ch_T0000488:0;Name=VCY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16008207	16008341	.	-	.	source_transcript=hg002_chrY_paternal_327.1;source_transcript_name=hg002_chrY_paternal_327.1;source_gene=hg002_chrY_paternal_327;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_327;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_327.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_327.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY;alternative_source_transcripts=hg002_chrY_paternal_327.1,hg002_chrY_paternal_327.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000488;gene_id=HG03009_ch_G0000170;Parent=HG03009_ch_T0000488;transcript_name=hg002_chrY_paternal_327.1;gene_name=VCY;ID=exon:HG03009_ch_T0000488:1;Name=VCY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16008207	16008308	.	-	0	source_transcript=hg002_chrY_paternal_327.1;source_transcript_name=hg002_chrY_paternal_327.1;source_gene=hg002_chrY_paternal_327;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_327;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_327.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_327.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY;alternative_source_transcripts=hg002_chrY_paternal_327.1,hg002_chrY_paternal_327.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000488;gene_id=HG03009_ch_G0000170;Parent=HG03009_ch_T0000488;transcript_name=hg002_chrY_paternal_327.1;gene_name=VCY;ID=CDS:HG03009_ch_T0000488:1;Name=VCY;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	16008306	16008308	.	-	0	source_transcript=hg002_chrY_paternal_327.1;source_transcript_name=hg002_chrY_paternal_327.1;source_gene=hg002_chrY_paternal_327;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_327;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_327.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_327.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY;alternative_source_transcripts=hg002_chrY_paternal_327.1,hg002_chrY_paternal_327.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000488;gene_id=HG03009_ch_G0000170;Parent=HG03009_ch_T0000488;transcript_name=hg002_chrY_paternal_327.1;gene_name=VCY;ID=start_codon:HG03009_ch_T0000488;Name=VCY;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	16078098	16078829	.	+	.	source_gene_common_name=VCY1B;source_gene=hg002_chrY_paternal_328;alternative_source_transcripts=hg002_chrY_paternal_328.1,hg002_chrY_paternal_328.1;gene_id=HG03009_ch_G0000171;gene_biotype=protein_coding;gene_name=VCY1B;gene_sources=liftoff,augTM;ID=HG03009_ch_G0000171;Name=VCY1B
HG03009_chrY	CAT	transcript	16078098	16078829	100	+	.	source_transcript=hg002_chrY_paternal_328.1;source_transcript_name=hg002_chrY_paternal_328.1;source_gene=hg002_chrY_paternal_328;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_328;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_328.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_328.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY1B;alternative_source_transcripts=hg002_chrY_paternal_328.1,hg002_chrY_paternal_328.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000489;gene_id=HG03009_ch_G0000171;Parent=HG03009_ch_G0000171;transcript_name=hg002_chrY_paternal_328.1;gene_name=VCY1B;ID=HG03009_ch_T0000489;Name=VCY1B
HG03009_chrY	CAT	exon	16078098	16078262	.	+	.	source_transcript=hg002_chrY_paternal_328.1;source_transcript_name=hg002_chrY_paternal_328.1;source_gene=hg002_chrY_paternal_328;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_328;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_328.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_328.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY1B;alternative_source_transcripts=hg002_chrY_paternal_328.1,hg002_chrY_paternal_328.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000489;gene_id=HG03009_ch_G0000171;Parent=HG03009_ch_T0000489;transcript_name=hg002_chrY_paternal_328.1;gene_name=VCY1B;ID=exon:HG03009_ch_T0000489:0;Name=VCY1B;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16078161	16078262	.	+	0	source_transcript=hg002_chrY_paternal_328.1;source_transcript_name=hg002_chrY_paternal_328.1;source_gene=hg002_chrY_paternal_328;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_328;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_328.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_328.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY1B;alternative_source_transcripts=hg002_chrY_paternal_328.1,hg002_chrY_paternal_328.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000489;gene_id=HG03009_ch_G0000171;Parent=HG03009_ch_T0000489;transcript_name=hg002_chrY_paternal_328.1;gene_name=VCY1B;ID=CDS:HG03009_ch_T0000489:0;Name=VCY1B;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	16078161	16078163	.	+	0	source_transcript=hg002_chrY_paternal_328.1;source_transcript_name=hg002_chrY_paternal_328.1;source_gene=hg002_chrY_paternal_328;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_328;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_328.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_328.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY1B;alternative_source_transcripts=hg002_chrY_paternal_328.1,hg002_chrY_paternal_328.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000489;gene_id=HG03009_ch_G0000171;Parent=HG03009_ch_T0000489;transcript_name=hg002_chrY_paternal_328.1;gene_name=VCY1B;ID=start_codon:HG03009_ch_T0000489;Name=VCY1B;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16078263	16078454	.	+	.	source_transcript=hg002_chrY_paternal_328.1;source_transcript_name=hg002_chrY_paternal_328.1;source_gene=hg002_chrY_paternal_328;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_328;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_328.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_328.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY1B;alternative_source_transcripts=hg002_chrY_paternal_328.1,hg002_chrY_paternal_328.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000489;gene_id=HG03009_ch_G0000171;Parent=HG03009_ch_T0000489;transcript_name=hg002_chrY_paternal_328.1;gene_name=VCY1B;ID=intron:HG03009_ch_T0000489:0;Name=VCY1B;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16078455	16078829	.	+	.	source_transcript=hg002_chrY_paternal_328.1;source_transcript_name=hg002_chrY_paternal_328.1;source_gene=hg002_chrY_paternal_328;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_328;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_328.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_328.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY1B;alternative_source_transcripts=hg002_chrY_paternal_328.1,hg002_chrY_paternal_328.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000489;gene_id=HG03009_ch_G0000171;Parent=HG03009_ch_T0000489;transcript_name=hg002_chrY_paternal_328.1;gene_name=VCY1B;ID=exon:HG03009_ch_T0000489:1;Name=VCY1B;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16078455	16078730	.	+	0	source_transcript=hg002_chrY_paternal_328.1;source_transcript_name=hg002_chrY_paternal_328.1;source_gene=hg002_chrY_paternal_328;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_328;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_328.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_328.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY1B;alternative_source_transcripts=hg002_chrY_paternal_328.1,hg002_chrY_paternal_328.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000489;gene_id=HG03009_ch_G0000171;Parent=HG03009_ch_T0000489;transcript_name=hg002_chrY_paternal_328.1;gene_name=VCY1B;ID=CDS:HG03009_ch_T0000489:1;Name=VCY1B;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	16078728	16078730	.	+	0	source_transcript=hg002_chrY_paternal_328.1;source_transcript_name=hg002_chrY_paternal_328.1;source_gene=hg002_chrY_paternal_328;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_328;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_328.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_328.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY1B;alternative_source_transcripts=hg002_chrY_paternal_328.1,hg002_chrY_paternal_328.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000489;gene_id=HG03009_ch_G0000171;Parent=HG03009_ch_T0000489;transcript_name=hg002_chrY_paternal_328.1;gene_name=VCY1B;ID=stop_codon:HG03009_ch_T0000489;Name=VCY1B;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	16544514	16867497	.	+	.	source_gene_common_name=NLGN4Y;source_gene=hg002_chrY_paternal_331;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;gene_id=HG03009_ch_G0000172;gene_biotype=protein_coding;gene_name=NLGN4Y;gene_sources=liftoff,augTM;ID=HG03009_ch_G0000172;Name=NLGN4Y
HG03009_chrY	CAT	transcript	16544514	16755449	100	+	.	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000490;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_G0000172;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG03009_ch_T0000490;Name=NLGN4Y
HG03009_chrY	CAT	exon	16544514	16544839	.	+	.	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000490;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000490;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000490:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16544840	16643921	.	+	.	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000490;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000490;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000490:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16643922	16644504	.	+	.	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000490;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000490;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000490:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16644033	16644504	.	+	0	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000490;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000490;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000490:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	16644033	16644035	.	+	0	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000490;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000490;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG03009_ch_T0000490;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16644505	16741358	.	+	.	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000490;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000490;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000490:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16741359	16741418	.	+	.	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000490;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000490;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000490:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16741359	16741418	.	+	2	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000490;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000490;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000490:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16741419	16745016	.	+	.	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000490;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000490;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000490:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16745017	16745169	.	+	.	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000490;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000490;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000490:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16745017	16745169	.	+	2	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000490;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000490;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000490:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16745170	16755351	.	+	.	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000490;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000490;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000490:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16755352	16755449	.	+	.	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000490;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000490;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000490:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16755352	16755437	.	+	2	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000490;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000490;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000490:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	16755435	16755437	.	+	0	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000490;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000490;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG03009_ch_T0000490;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	16544514	16867497	100	+	.	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000491;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_G0000172;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG03009_ch_T0000491;Name=NLGN4Y
HG03009_chrY	CAT	exon	16544514	16544839	.	+	.	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000491;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000491;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000491:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16544840	16741358	.	+	.	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000491;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000491;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000491:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16741359	16741418	.	+	.	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000491;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000491;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000491:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16741419	16745016	.	+	.	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000491;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000491;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000491:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16745017	16745169	.	+	.	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000491;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000491;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000491:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16745049	16745169	.	+	0	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000491;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000491;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000491:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	16745049	16745051	.	+	0	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000491;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000491;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG03009_ch_T0000491;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16745170	16846030	.	+	.	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000491;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000491;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000491:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16846031	16846216	.	+	.	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000491;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000491;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000491:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16846031	16846216	.	+	2	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000491;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000491;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000491:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16846217	16851572	.	+	.	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000491;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000491;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000491:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16851573	16852362	.	+	.	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000491;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000491;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000491:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16851573	16852362	.	+	2	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000491;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000491;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000491:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16852363	16862255	.	+	.	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000491;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000491;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000491:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16862256	16867497	.	+	.	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000491;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000491;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000491:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16862256	16863105	.	+	1	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000491;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000491;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000491:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	16863103	16863105	.	+	0	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000491;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000491;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG03009_ch_T0000491;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	16544514	16867497	100	+	.	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000492;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_G0000172;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG03009_ch_T0000492;Name=NLGN4Y
HG03009_chrY	CAT	exon	16544514	16544839	.	+	.	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000492;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000492;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000492:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16544840	16643921	.	+	.	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000492;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000492;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000492:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16643922	16644504	.	+	.	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000492;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000492;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000492:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16644033	16644504	.	+	0	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000492;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000492;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000492:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	16644033	16644035	.	+	0	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000492;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000492;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG03009_ch_T0000492;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16644505	16741358	.	+	.	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000492;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000492;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000492:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16741359	16741418	.	+	.	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000492;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000492;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000492:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16741359	16741418	.	+	2	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000492;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000492;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000492:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16741419	16745016	.	+	.	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000492;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000492;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000492:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16745017	16745169	.	+	.	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000492;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000492;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000492:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16745017	16745169	.	+	2	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000492;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000492;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000492:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16745170	16846030	.	+	.	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000492;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000492;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000492:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16846031	16846216	.	+	.	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000492;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000492;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000492:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16846031	16846216	.	+	2	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000492;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000492;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000492:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16846217	16851572	.	+	.	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000492;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000492;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000492:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16851573	16852362	.	+	.	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000492;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000492;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000492:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16851573	16852362	.	+	2	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000492;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000492;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000492:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16852363	16862255	.	+	.	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000492;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000492;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000492:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16862256	16867497	.	+	.	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000492;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000492;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000492:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16862256	16863105	.	+	1	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000492;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000492;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000492:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	16863103	16863105	.	+	0	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000492;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000492;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG03009_ch_T0000492;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	16544514	16867497	100	+	.	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000493;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_G0000172;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG03009_ch_T0000493;Name=NLGN4Y
HG03009_chrY	CAT	exon	16544514	16544839	.	+	.	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000493;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000493;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000493:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16544840	16643921	.	+	.	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000493;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000493;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000493:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16643922	16644504	.	+	.	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000493;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000493;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000493:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16644033	16644504	.	+	0	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000493;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000493;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000493:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	16644033	16644035	.	+	0	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000493;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000493;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG03009_ch_T0000493;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16644505	16745016	.	+	.	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000493;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000493;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000493:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16745017	16745169	.	+	.	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000493;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000493;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000493:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16745017	16745169	.	+	2	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000493;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000493;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000493:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16745170	16846030	.	+	.	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000493;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000493;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000493:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16846031	16846216	.	+	.	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000493;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000493;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000493:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16846031	16846216	.	+	2	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000493;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000493;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000493:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16846217	16851572	.	+	.	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000493;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000493;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000493:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16851573	16852362	.	+	.	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000493;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000493;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000493:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16851573	16852362	.	+	2	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000493;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000493;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000493:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16852363	16862255	.	+	.	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000493;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000493;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000493:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16862256	16867497	.	+	.	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000493;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000493;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000493:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16862256	16863105	.	+	1	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000493;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000493;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000493:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	16863103	16863105	.	+	0	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000493;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000493;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG03009_ch_T0000493;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	16544514	16867497	100	+	.	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000494;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_G0000172;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG03009_ch_T0000494;Name=NLGN4Y
HG03009_chrY	CAT	exon	16544514	16545470	.	+	.	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000494;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000494;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000494:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16545471	16643921	.	+	.	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000494;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000494;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000494:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16643922	16644504	.	+	.	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000494;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000494;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000494:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16644033	16644504	.	+	0	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000494;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000494;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000494:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	16644033	16644035	.	+	0	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000494;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000494;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG03009_ch_T0000494;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16644505	16741358	.	+	.	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000494;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000494;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000494:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16741359	16741418	.	+	.	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000494;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000494;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000494:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16741359	16741418	.	+	2	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000494;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000494;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000494:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16741419	16745016	.	+	.	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000494;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000494;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000494:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16745017	16745169	.	+	.	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000494;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000494;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000494:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16745017	16745169	.	+	2	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000494;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000494;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000494:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16745170	16846030	.	+	.	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000494;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000494;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000494:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16846031	16846216	.	+	.	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000494;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000494;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000494:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16846031	16846216	.	+	2	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000494;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000494;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000494:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16846217	16851572	.	+	.	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000494;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000494;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000494:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16851573	16852362	.	+	.	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000494;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000494;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000494:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16851573	16852362	.	+	2	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000494;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000494;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000494:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16852363	16862255	.	+	.	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000494;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000494;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000494:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16862256	16867497	.	+	.	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000494;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000494;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000494:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16862256	16863105	.	+	1	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000494;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000494;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000494:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	16863103	16863105	.	+	0	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000494;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000494;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG03009_ch_T0000494;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	16545644	16867497	100	+	.	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000495;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_G0000172;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG03009_ch_T0000495;Name=NLGN4Y
HG03009_chrY	CAT	exon	16545644	16545796	.	+	.	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000495;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000495;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000495:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16545797	16643933	.	+	.	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000495;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000495;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000495:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16643934	16644504	.	+	.	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000495;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000495;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000495:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16644033	16644504	.	+	0	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000495;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000495;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000495:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	16644033	16644035	.	+	0	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000495;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000495;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG03009_ch_T0000495;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16644505	16745016	.	+	.	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000495;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000495;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000495:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16745017	16745169	.	+	.	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000495;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000495;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000495:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16745017	16745169	.	+	2	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000495;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000495;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000495:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16745170	16846030	.	+	.	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000495;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000495;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000495:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16846031	16846216	.	+	.	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000495;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000495;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000495:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16846031	16846216	.	+	2	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000495;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000495;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000495:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16846217	16851572	.	+	.	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000495;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000495;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000495:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16851573	16852362	.	+	.	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000495;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000495;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000495:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16851573	16852362	.	+	2	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000495;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000495;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000495:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16852363	16862255	.	+	.	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000495;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000495;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000495:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16862256	16867497	.	+	.	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000495;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000495;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000495:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16862256	16863105	.	+	1	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000495;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000495;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000495:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	16863103	16863105	.	+	0	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000495;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000495;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG03009_ch_T0000495;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	16545870	16867497	100	+	.	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000496;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_G0000172;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG03009_ch_T0000496;Name=NLGN4Y
HG03009_chrY	CAT	exon	16545870	16546182	.	+	.	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000496;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000496;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000496:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16546183	16643921	.	+	.	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000496;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000496;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000496:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16643922	16644504	.	+	.	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000496;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000496;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000496:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16644033	16644504	.	+	0	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000496;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000496;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000496:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	16644033	16644035	.	+	0	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000496;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000496;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG03009_ch_T0000496;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16644505	16741358	.	+	.	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000496;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000496;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000496:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16741359	16741418	.	+	.	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000496;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000496;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000496:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16741359	16741418	.	+	2	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000496;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000496;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000496:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16741419	16745016	.	+	.	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000496;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000496;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000496:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16745017	16745169	.	+	.	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000496;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000496;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000496:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16745017	16745169	.	+	2	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000496;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000496;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000496:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16745170	16846030	.	+	.	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000496;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000496;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000496:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16846031	16846216	.	+	.	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000496;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000496;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000496:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16846031	16846216	.	+	2	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000496;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000496;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000496:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16846217	16851572	.	+	.	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000496;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000496;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000496:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16851573	16852362	.	+	.	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000496;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000496;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000496:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16851573	16852362	.	+	2	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000496;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000496;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000496:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16852363	16862255	.	+	.	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000496;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000496;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000496:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16862256	16867497	.	+	.	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000496;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000496;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000496:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16862256	16863105	.	+	1	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000496;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000496;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000496:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	16863103	16863105	.	+	0	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000496;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000496;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG03009_ch_T0000496;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	16545870	16867497	100	+	.	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000497;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_G0000172;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG03009_ch_T0000497;Name=NLGN4Y
HG03009_chrY	CAT	exon	16545870	16546182	.	+	.	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000497;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000497;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000497:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16546183	16643921	.	+	.	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000497;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000497;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000497:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16643922	16644504	.	+	.	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000497;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000497;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000497:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16644033	16644504	.	+	0	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000497;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000497;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000497:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	16644033	16644035	.	+	0	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000497;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000497;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG03009_ch_T0000497;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16644505	16745016	.	+	.	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000497;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000497;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000497:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16745017	16745169	.	+	.	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000497;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000497;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000497:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16745017	16745169	.	+	2	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000497;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000497;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000497:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16745170	16846030	.	+	.	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000497;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000497;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000497:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16846031	16846216	.	+	.	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000497;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000497;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000497:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16846031	16846216	.	+	2	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000497;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000497;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000497:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16846217	16851572	.	+	.	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000497;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000497;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000497:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16851573	16852362	.	+	.	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000497;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000497;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000497:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16851573	16852362	.	+	2	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000497;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000497;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000497:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16852363	16862255	.	+	.	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000497;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000497;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000497:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16862256	16867497	.	+	.	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000497;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000497;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000497:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16862256	16863105	.	+	1	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000497;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000497;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000497:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	16863103	16863105	.	+	0	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000497;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000497;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG03009_ch_T0000497;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	16546427	16755449	100	+	.	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000498;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_G0000172;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG03009_ch_T0000498;Name=NLGN4Y
HG03009_chrY	CAT	exon	16546427	16546834	.	+	.	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000498;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000498;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000498:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16546835	16643921	.	+	.	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000498;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000498;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000498:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16643922	16644504	.	+	.	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000498;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000498;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000498:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16644033	16644504	.	+	0	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000498;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000498;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000498:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	16644033	16644035	.	+	0	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000498;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000498;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG03009_ch_T0000498;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16644505	16741358	.	+	.	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000498;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000498;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000498:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16741359	16741418	.	+	.	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000498;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000498;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000498:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16741359	16741418	.	+	2	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000498;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000498;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000498:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16741419	16745016	.	+	.	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000498;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000498;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000498:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16745017	16745169	.	+	.	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000498;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000498;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000498:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16745017	16745169	.	+	2	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000498;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000498;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000498:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16745170	16755351	.	+	.	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000498;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000498;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000498:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16755352	16755449	.	+	.	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000498;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000498;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000498:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16755352	16755437	.	+	2	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000498;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000498;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000498:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	16755435	16755437	.	+	0	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000498;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000498;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG03009_ch_T0000498;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	16546427	16867497	100	+	.	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000499;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_G0000172;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG03009_ch_T0000499;Name=NLGN4Y
HG03009_chrY	CAT	exon	16546427	16546834	.	+	.	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000499;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000499;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000499:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16546835	16643921	.	+	.	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000499;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000499;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000499:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16643922	16644504	.	+	.	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000499;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000499;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000499:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16644033	16644504	.	+	0	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000499;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000499;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000499:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	16644033	16644035	.	+	0	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000499;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000499;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG03009_ch_T0000499;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16644505	16741358	.	+	.	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000499;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000499;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000499:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16741359	16741418	.	+	.	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000499;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000499;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000499:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16741359	16741418	.	+	2	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000499;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000499;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000499:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16741419	16745016	.	+	.	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000499;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000499;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000499:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16745017	16745169	.	+	.	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000499;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000499;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000499:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16745017	16745169	.	+	2	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000499;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000499;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000499:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16745170	16846030	.	+	.	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000499;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000499;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000499:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16846031	16846216	.	+	.	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000499;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000499;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000499:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16846031	16846216	.	+	2	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000499;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000499;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000499:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16846217	16851572	.	+	.	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000499;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000499;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000499:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16851573	16852362	.	+	.	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000499;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000499;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000499:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16851573	16852362	.	+	2	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000499;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000499;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000499:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16852363	16862255	.	+	.	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000499;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000499;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000499:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16862256	16867497	.	+	.	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000499;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000499;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000499:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16862256	16863105	.	+	1	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000499;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000499;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000499:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	16863103	16863105	.	+	0	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000499;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000499;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG03009_ch_T0000499;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	16546427	16867497	100	+	.	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000500;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_G0000172;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG03009_ch_T0000500;Name=NLGN4Y
HG03009_chrY	CAT	exon	16546427	16546606	.	+	.	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000500;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000500;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000500:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16546607	16643921	.	+	.	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000500;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000500;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000500:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16643922	16644504	.	+	.	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000500;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000500;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000500:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16644033	16644504	.	+	0	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000500;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000500;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000500:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	16644033	16644035	.	+	0	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000500;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000500;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG03009_ch_T0000500;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16644505	16741358	.	+	.	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000500;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000500;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000500:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16741359	16741418	.	+	.	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000500;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000500;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000500:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16741359	16741418	.	+	2	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000500;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000500;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000500:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16741419	16745016	.	+	.	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000500;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000500;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000500:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16745017	16745169	.	+	.	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000500;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000500;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000500:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16745017	16745169	.	+	2	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000500;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000500;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000500:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16745170	16846030	.	+	.	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000500;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000500;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000500:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16846031	16846216	.	+	.	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000500;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000500;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000500:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16846031	16846216	.	+	2	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000500;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000500;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000500:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16846217	16851572	.	+	.	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000500;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000500;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000500:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16851573	16852362	.	+	.	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000500;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000500;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000500:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16851573	16852362	.	+	2	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000500;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000500;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000500:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16852363	16862255	.	+	.	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000500;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000500;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000500:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16862256	16867497	.	+	.	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000500;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000500;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000500:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16862256	16863105	.	+	1	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000500;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000500;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000500:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	16863103	16863105	.	+	0	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000500;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000500;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG03009_ch_T0000500;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	16546427	16867497	100	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000501;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_G0000172;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG03009_ch_T0000501;Name=NLGN4Y
HG03009_chrY	CAT	exon	16546427	16546834	.	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000501;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000501;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000501:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16546835	16606084	.	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000501;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000501;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000501:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16606085	16606186	.	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000501;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000501;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000501:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16606187	16609520	.	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000501;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000501;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000501:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16609521	16609625	.	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000501;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000501;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000501:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16609626	16643921	.	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000501;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000501;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000501:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16643922	16644504	.	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000501;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000501;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000501:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16644033	16644504	.	+	0	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000501;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000501;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000501:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	16644033	16644035	.	+	0	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000501;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000501;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG03009_ch_T0000501;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16644505	16745016	.	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000501;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000501;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000501:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16745017	16745169	.	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000501;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000501;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000501:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16745017	16745169	.	+	2	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000501;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000501;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000501:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16745170	16846030	.	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000501;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000501;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000501:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16846031	16846216	.	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000501;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000501;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000501:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16846031	16846216	.	+	2	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000501;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000501;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000501:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16846217	16851572	.	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000501;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000501;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000501:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16851573	16852362	.	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000501;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000501;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000501:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16851573	16852362	.	+	2	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000501;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000501;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000501:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16852363	16862255	.	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000501;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000501;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000501:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16862256	16867497	.	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000501;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000501;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000501:7;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16862256	16863105	.	+	1	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000501;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000501;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000501:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	16863103	16863105	.	+	0	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000501;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000501;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG03009_ch_T0000501;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	16546427	16867497	100	+	.	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000502;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_G0000172;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG03009_ch_T0000502;Name=NLGN4Y
HG03009_chrY	CAT	exon	16546427	16546606	.	+	.	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000502;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000502;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000502:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16546607	16643921	.	+	.	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000502;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000502;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000502:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16643922	16644504	.	+	.	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000502;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000502;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000502:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16644033	16644504	.	+	0	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000502;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000502;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000502:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	16644033	16644035	.	+	0	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000502;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000502;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG03009_ch_T0000502;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16644505	16745016	.	+	.	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000502;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000502;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000502:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16745017	16745169	.	+	.	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000502;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000502;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000502:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16745017	16745169	.	+	2	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000502;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000502;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000502:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16745170	16846030	.	+	.	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000502;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000502;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000502:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16846031	16846216	.	+	.	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000502;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000502;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000502:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16846031	16846216	.	+	2	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000502;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000502;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000502:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16846217	16851572	.	+	.	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000502;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000502;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000502:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16851573	16852362	.	+	.	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000502;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000502;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000502:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16851573	16852362	.	+	2	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000502;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000502;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000502:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16852363	16862255	.	+	.	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000502;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000502;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000502:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16862256	16867497	.	+	.	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000502;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000502;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000502:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16862256	16863105	.	+	1	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000502;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000502;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000502:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	16863103	16863105	.	+	0	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000502;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000502;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG03009_ch_T0000502;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	16546427	16867497	100	+	.	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000503;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_G0000172;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG03009_ch_T0000503;Name=NLGN4Y
HG03009_chrY	CAT	exon	16546427	16546455	.	+	.	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000503;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000503;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000503:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16546456	16643921	.	+	.	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000503;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000503;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000503:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16643922	16644504	.	+	.	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000503;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000503;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000503:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16644033	16644504	.	+	0	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000503;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000503;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000503:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	16644033	16644035	.	+	0	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000503;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000503;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG03009_ch_T0000503;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16644505	16745016	.	+	.	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000503;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000503;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000503:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16745017	16745169	.	+	.	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000503;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000503;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000503:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16745017	16745169	.	+	2	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000503;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000503;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000503:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16745170	16846030	.	+	.	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000503;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000503;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000503:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16846031	16846216	.	+	.	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000503;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000503;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000503:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16846031	16846216	.	+	2	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000503;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000503;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000503:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16846217	16851572	.	+	.	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000503;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000503;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000503:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16851573	16852362	.	+	.	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000503;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000503;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000503:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16851573	16852362	.	+	2	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000503;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000503;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000503:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16852363	16862255	.	+	.	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000503;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000503;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000503:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16862256	16867497	.	+	.	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000503;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000503;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000503:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16862256	16863105	.	+	1	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000503;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000503;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000503:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	16863103	16863105	.	+	0	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000503;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000503;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG03009_ch_T0000503;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	16546427	16867497	100	+	.	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000504;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_G0000172;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG03009_ch_T0000504;Name=NLGN4Y
HG03009_chrY	CAT	exon	16546427	16546834	.	+	.	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000504;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000504;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000504:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16546835	16643921	.	+	.	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000504;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000504;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000504:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16643922	16644504	.	+	.	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000504;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000504;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000504:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16644033	16644504	.	+	0	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000504;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000504;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000504:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	16644033	16644035	.	+	0	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000504;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000504;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG03009_ch_T0000504;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16644505	16745016	.	+	.	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000504;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000504;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000504:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16745017	16745169	.	+	.	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000504;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000504;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000504:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16745017	16745169	.	+	2	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000504;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000504;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000504:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16745170	16846030	.	+	.	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000504;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000504;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000504:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16846031	16846216	.	+	.	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000504;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000504;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000504:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16846031	16846216	.	+	2	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000504;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000504;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000504:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16846217	16851572	.	+	.	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000504;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000504;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000504:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16851573	16852362	.	+	.	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000504;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000504;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000504:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16851573	16852362	.	+	2	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000504;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000504;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000504:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16852363	16862255	.	+	.	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000504;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000504;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000504:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16862256	16867497	.	+	.	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000504;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000504;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000504:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16862256	16863105	.	+	1	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000504;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000504;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000504:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	16863103	16863105	.	+	0	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000504;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000504;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG03009_ch_T0000504;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	16546427	16867497	100	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000505;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_G0000172;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG03009_ch_T0000505;Name=NLGN4Y
HG03009_chrY	CAT	exon	16546427	16546834	.	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000505;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000505;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000505:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16546835	16582491	.	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000505;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000505;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000505:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16582492	16582571	.	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000505;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000505;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000505:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16582572	16643921	.	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000505;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000505;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000505:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16643922	16644504	.	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000505;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000505;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000505:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16644033	16644504	.	+	0	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000505;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000505;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000505:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	16644033	16644035	.	+	0	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000505;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000505;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG03009_ch_T0000505;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16644505	16741358	.	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000505;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000505;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000505:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16741359	16741418	.	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000505;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000505;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000505:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16741359	16741418	.	+	2	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000505;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000505;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000505:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16741419	16745016	.	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000505;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000505;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000505:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16745017	16745169	.	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000505;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000505;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000505:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16745017	16745169	.	+	2	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000505;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000505;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000505:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16745170	16846030	.	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000505;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000505;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000505:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16846031	16846216	.	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000505;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000505;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000505:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16846031	16846216	.	+	2	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000505;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000505;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000505:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16846217	16851572	.	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000505;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000505;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000505:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16851573	16852362	.	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000505;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000505;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000505:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16851573	16852362	.	+	2	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000505;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000505;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000505:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16852363	16862255	.	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000505;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000505;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000505:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16862256	16867497	.	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000505;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000505;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000505:7;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16862256	16863105	.	+	1	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000505;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000505;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000505:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	16863103	16863105	.	+	0	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000505;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000505;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG03009_ch_T0000505;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	16546427	16867497	100	+	.	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000506;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_G0000172;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG03009_ch_T0000506;Name=NLGN4Y
HG03009_chrY	CAT	exon	16546427	16546455	.	+	.	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000506;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000506;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000506:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16546456	16643921	.	+	.	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000506;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000506;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000506:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16643922	16644504	.	+	.	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000506;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000506;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000506:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16644033	16644504	.	+	0	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000506;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000506;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000506:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	16644033	16644035	.	+	0	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000506;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000506;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG03009_ch_T0000506;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16644505	16741358	.	+	.	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000506;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000506;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000506:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16741359	16741418	.	+	.	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000506;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000506;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000506:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16741359	16741418	.	+	2	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000506;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000506;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000506:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16741419	16745016	.	+	.	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000506;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000506;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000506:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16745017	16745169	.	+	.	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000506;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000506;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000506:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16745017	16745169	.	+	2	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000506;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000506;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000506:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16745170	16846030	.	+	.	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000506;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000506;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000506:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16846031	16846216	.	+	.	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000506;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000506;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000506:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16846031	16846216	.	+	2	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000506;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000506;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000506:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16846217	16851572	.	+	.	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000506;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000506;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000506:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16851573	16852362	.	+	.	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000506;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000506;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000506:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16851573	16852362	.	+	2	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000506;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000506;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000506:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16852363	16862255	.	+	.	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000506;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000506;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000506:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16862256	16867497	.	+	.	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000506;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000506;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000506:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16862256	16863105	.	+	1	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000506;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000506;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000506:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	16863103	16863105	.	+	0	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000506;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000506;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG03009_ch_T0000506;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	16546427	16867497	100	+	.	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000507;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_G0000172;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG03009_ch_T0000507;Name=NLGN4Y
HG03009_chrY	CAT	exon	16546427	16546834	.	+	.	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000507;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000507;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000507:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16546835	16582491	.	+	.	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000507;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000507;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000507:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16582492	16582571	.	+	.	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000507;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000507;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000507:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16582572	16643921	.	+	.	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000507;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000507;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000507:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16643922	16644504	.	+	.	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000507;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000507;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000507:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16644033	16644504	.	+	0	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000507;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000507;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000507:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	16644033	16644035	.	+	0	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000507;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000507;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG03009_ch_T0000507;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16644505	16745016	.	+	.	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000507;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000507;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000507:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16745017	16745169	.	+	.	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000507;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000507;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000507:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16745017	16745169	.	+	2	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000507;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000507;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000507:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16745170	16846030	.	+	.	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000507;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000507;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000507:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16846031	16846216	.	+	.	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000507;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000507;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000507:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16846031	16846216	.	+	2	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000507;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000507;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000507:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16846217	16851572	.	+	.	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000507;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000507;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000507:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16851573	16852362	.	+	.	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000507;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000507;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000507:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16851573	16852362	.	+	2	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000507;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000507;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000507:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16852363	16862255	.	+	.	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000507;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000507;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000507:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16862256	16867497	.	+	.	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000507;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000507;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000507:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16862256	16863105	.	+	1	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000507;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000507;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000507:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	16863103	16863105	.	+	0	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000507;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000507;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG03009_ch_T0000507;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	16546427	16755449	100	+	.	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000508;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_G0000172;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG03009_ch_T0000508;Name=NLGN4Y
HG03009_chrY	CAT	exon	16546427	16546606	.	+	.	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000508;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000508;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000508:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16546607	16643921	.	+	.	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000508;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000508;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000508:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16643922	16644504	.	+	.	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000508;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000508;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000508:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16644033	16644504	.	+	0	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000508;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000508;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000508:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	16644033	16644035	.	+	0	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000508;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000508;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG03009_ch_T0000508;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16644505	16741358	.	+	.	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000508;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000508;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000508:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16741359	16741418	.	+	.	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000508;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000508;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000508:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16741359	16741418	.	+	2	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000508;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000508;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000508:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16741419	16745016	.	+	.	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000508;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000508;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000508:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16745017	16745169	.	+	.	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000508;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000508;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000508:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16745017	16745169	.	+	2	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000508;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000508;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000508:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16745170	16755351	.	+	.	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000508;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000508;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000508:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16755352	16755449	.	+	.	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000508;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000508;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000508:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16755352	16755437	.	+	2	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000508;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000508;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000508:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	16755435	16755437	.	+	0	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000508;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000508;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG03009_ch_T0000508;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	16575634	16867497	100	+	.	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000509;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_G0000172;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG03009_ch_T0000509;Name=NLGN4Y
HG03009_chrY	CAT	exon	16575634	16582571	.	+	.	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000509;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000509;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000509:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16582572	16643921	.	+	.	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000509;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000509;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000509:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16643922	16644504	.	+	.	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000509;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000509;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000509:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16644033	16644504	.	+	0	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000509;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000509;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000509:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	16644033	16644035	.	+	0	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000509;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000509;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG03009_ch_T0000509;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16644505	16741358	.	+	.	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000509;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000509;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000509:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16741359	16741418	.	+	.	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000509;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000509;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000509:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16741359	16741418	.	+	2	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000509;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000509;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000509:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16741419	16745016	.	+	.	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000509;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000509;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000509:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16745017	16745169	.	+	.	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000509;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000509;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000509:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16745017	16745169	.	+	2	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000509;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000509;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000509:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16745170	16846030	.	+	.	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000509;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000509;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000509:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16846031	16846216	.	+	.	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000509;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000509;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000509:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16846031	16846216	.	+	2	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000509;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000509;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000509:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16846217	16851572	.	+	.	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000509;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000509;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000509:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16851573	16852362	.	+	.	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000509;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000509;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000509:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16851573	16852362	.	+	2	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000509;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000509;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000509:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16852363	16862255	.	+	.	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000509;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000509;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000509:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16862256	16867497	.	+	.	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000509;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000509;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000509:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16862256	16863105	.	+	1	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000509;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000509;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000509:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	16863103	16863105	.	+	0	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000509;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000509;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG03009_ch_T0000509;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	16604500	16867497	100	+	.	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000510;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_G0000172;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG03009_ch_T0000510;Name=NLGN4Y
HG03009_chrY	CAT	exon	16604500	16606202	.	+	.	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000510;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000510;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000510:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16606203	16643921	.	+	.	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000510;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000510;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000510:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16643922	16644504	.	+	.	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000510;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000510;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000510:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16644033	16644504	.	+	0	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000510;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000510;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000510:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	16644033	16644035	.	+	0	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000510;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000510;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG03009_ch_T0000510;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16644505	16741358	.	+	.	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000510;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000510;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000510:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16741359	16741418	.	+	.	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000510;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000510;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000510:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16741359	16741418	.	+	2	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000510;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000510;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000510:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16741419	16745016	.	+	.	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000510;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000510;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000510:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16745017	16745169	.	+	.	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000510;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000510;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000510:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16745017	16745169	.	+	2	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000510;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000510;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000510:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16745170	16846030	.	+	.	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000510;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000510;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000510:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16846031	16846216	.	+	.	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000510;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000510;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000510:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16846031	16846216	.	+	2	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000510;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000510;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000510:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16846217	16851572	.	+	.	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000510;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000510;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000510:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16851573	16852362	.	+	.	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000510;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000510;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000510:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16851573	16852362	.	+	2	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000510;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000510;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000510:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16852363	16862255	.	+	.	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000510;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000510;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000510:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16862256	16867497	.	+	.	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000510;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000510;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000510:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16862256	16863105	.	+	1	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000510;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000510;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000510:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	16863103	16863105	.	+	0	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000510;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000510;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG03009_ch_T0000510;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	16604500	16867497	100	+	.	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000511;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_G0000172;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG03009_ch_T0000511;Name=NLGN4Y
HG03009_chrY	CAT	exon	16604500	16606202	.	+	.	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000511;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000511;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000511:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16606203	16643921	.	+	.	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000511;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000511;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000511:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16643922	16644504	.	+	.	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000511;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000511;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000511:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16644033	16644504	.	+	0	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000511;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000511;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000511:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	16644033	16644035	.	+	0	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000511;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000511;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG03009_ch_T0000511;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16644505	16745016	.	+	.	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000511;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000511;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000511:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16745017	16745169	.	+	.	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000511;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000511;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000511:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16745017	16745169	.	+	2	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000511;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000511;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000511:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16745170	16846030	.	+	.	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000511;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000511;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000511:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16846031	16846216	.	+	.	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000511;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000511;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000511:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16846031	16846216	.	+	2	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000511;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000511;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000511:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16846217	16851572	.	+	.	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000511;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000511;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000511:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16851573	16852362	.	+	.	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000511;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000511;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000511:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16851573	16852362	.	+	2	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000511;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000511;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000511:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16852363	16862255	.	+	.	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000511;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000511;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000511:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16862256	16867497	.	+	.	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000511;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000511;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000511:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16862256	16863105	.	+	1	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000511;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000511;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000511:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	16863103	16863105	.	+	0	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000511;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000511;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG03009_ch_T0000511;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	16609521	16867497	100	+	.	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000512;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_G0000172;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG03009_ch_T0000512;Name=NLGN4Y
HG03009_chrY	CAT	exon	16609521	16609625	.	+	.	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000512;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000512;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000512:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16609626	16643921	.	+	.	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000512;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000512;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000512:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16643922	16644504	.	+	.	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000512;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000512;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000512:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16644033	16644504	.	+	0	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000512;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000512;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000512:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	16644033	16644035	.	+	0	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000512;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000512;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG03009_ch_T0000512;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16644505	16741358	.	+	.	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000512;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000512;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000512:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16741359	16741418	.	+	.	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000512;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000512;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000512:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16741359	16741418	.	+	2	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000512;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000512;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000512:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16741419	16745016	.	+	.	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000512;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000512;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000512:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16745017	16745169	.	+	.	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000512;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000512;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000512:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16745017	16745169	.	+	2	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000512;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000512;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000512:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16745170	16846030	.	+	.	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000512;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000512;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000512:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16846031	16846216	.	+	.	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000512;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000512;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000512:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16846031	16846216	.	+	2	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000512;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000512;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000512:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16846217	16851572	.	+	.	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000512;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000512;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000512:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16851573	16852362	.	+	.	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000512;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000512;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000512:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16851573	16852362	.	+	2	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000512;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000512;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000512:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16852363	16862255	.	+	.	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000512;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000512;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000512:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16862256	16867497	.	+	.	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000512;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000512;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000512:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16862256	16863105	.	+	1	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000512;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000512;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000512:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	16863103	16863105	.	+	0	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000512;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000512;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG03009_ch_T0000512;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	16643922	16867497	100	+	.	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000513;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_G0000172;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG03009_ch_T0000513;Name=NLGN4Y
HG03009_chrY	CAT	exon	16643922	16644504	.	+	.	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000513;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000513;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000513:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16644505	16722958	.	+	.	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000513;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000513;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000513:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16722959	16723052	.	+	.	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000513;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000513;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000513:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16723016	16723052	.	+	0	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000513;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000513;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000513:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	16723016	16723018	.	+	0	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000513;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000513;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG03009_ch_T0000513;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16723053	16741358	.	+	.	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000513;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000513;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000513:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16741359	16741418	.	+	.	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000513;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000513;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000513:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16741359	16741418	.	+	2	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000513;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000513;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000513:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16741419	16745016	.	+	.	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000513;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000513;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000513:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16745017	16745169	.	+	.	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000513;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000513;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000513:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16745017	16745169	.	+	2	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000513;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000513;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000513:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16745170	16846030	.	+	.	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000513;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000513;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000513:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16846031	16846216	.	+	.	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000513;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000513;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000513:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16846031	16846216	.	+	2	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000513;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000513;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000513:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16846217	16851572	.	+	.	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000513;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000513;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000513:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16851573	16852362	.	+	.	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000513;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000513;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000513:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16851573	16852362	.	+	2	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000513;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000513;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000513:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16852363	16862255	.	+	.	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000513;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000513;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000513:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16862256	16867497	.	+	.	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000513;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000513;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000513:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16862256	16863105	.	+	1	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000513;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000513;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000513:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	16863103	16863105	.	+	0	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000513;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000513;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG03009_ch_T0000513;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	16643934	16755449	100	+	.	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25,hg002_chrY_paternal_331.25;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000514;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_G0000172;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG03009_ch_T0000514;Name=NLGN4Y
HG03009_chrY	CAT	exon	16643934	16644504	.	+	.	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25,hg002_chrY_paternal_331.25;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000514;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000514;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000514:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16644033	16644504	.	+	0	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25,hg002_chrY_paternal_331.25;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000514;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000514;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000514:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	16644033	16644035	.	+	0	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25,hg002_chrY_paternal_331.25;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000514;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000514;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG03009_ch_T0000514;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16644505	16741358	.	+	.	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25,hg002_chrY_paternal_331.25;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000514;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000514;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000514:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16741359	16741418	.	+	.	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25,hg002_chrY_paternal_331.25;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000514;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000514;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000514:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16741359	16741418	.	+	2	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25,hg002_chrY_paternal_331.25;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000514;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000514;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000514:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16741419	16745016	.	+	.	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25,hg002_chrY_paternal_331.25;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000514;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000514;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000514:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16745017	16745169	.	+	.	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25,hg002_chrY_paternal_331.25;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000514;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000514;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000514:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16745017	16745169	.	+	2	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25,hg002_chrY_paternal_331.25;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000514;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000514;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000514:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16745170	16755351	.	+	.	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25,hg002_chrY_paternal_331.25;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000514;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000514;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000514:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16755352	16755449	.	+	.	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25,hg002_chrY_paternal_331.25;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000514;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000514;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000514:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16755352	16755437	.	+	2	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25,hg002_chrY_paternal_331.25;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000514;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000514;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000514:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	16755435	16755437	.	+	0	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25,hg002_chrY_paternal_331.25;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000514;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000514;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG03009_ch_T0000514;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	16726705	16867497	100	+	.	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000515;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_G0000172;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG03009_ch_T0000515;Name=NLGN4Y
HG03009_chrY	CAT	exon	16726705	16726725	.	+	.	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000515;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000515;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000515:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16726726	16741358	.	+	.	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000515;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000515;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000515:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16741359	16741418	.	+	.	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000515;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000515;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000515:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16741419	16745016	.	+	.	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000515;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000515;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000515:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16745017	16745169	.	+	.	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000515;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000515;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000515:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16745049	16745169	.	+	0	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000515;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000515;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000515:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	16745049	16745051	.	+	0	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000515;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000515;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG03009_ch_T0000515;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16745170	16846030	.	+	.	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000515;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000515;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000515:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16846031	16846216	.	+	.	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000515;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000515;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000515:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16846031	16846216	.	+	2	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000515;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000515;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000515:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16846217	16851572	.	+	.	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000515;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000515;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000515:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16851573	16852362	.	+	.	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000515;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000515;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000515:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16851573	16852362	.	+	2	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000515;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000515;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000515:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16852363	16862255	.	+	.	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000515;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000515;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03009_ch_T0000515:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16862256	16867497	.	+	.	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000515;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000515;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03009_ch_T0000515:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	16862256	16863105	.	+	1	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000515;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000515;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03009_ch_T0000515:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	16863103	16863105	.	+	0	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000515;gene_id=HG03009_ch_G0000172;Parent=HG03009_ch_T0000515;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG03009_ch_T0000515;Name=NLGN4Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	16815528	16825876	.	-	.	source_gene_common_name=NLGN4Y-AS1;source_gene=hg002_chrY_paternal_333;alternative_source_transcripts=hg002_chrY_paternal_333.1,hg002_chrY_paternal_333.1;gene_id=HG03009_ch_G0000173;gene_biotype=lncRNA;gene_name=NLGN4Y-AS1;gene_sources=liftoff;ID=HG03009_ch_G0000173;Name=NLGN4Y-AS1
HG03009_chrY	CAT	transcript	16815528	16825876	1000	-	.	source_transcript=hg002_chrY_paternal_333.1;source_transcript_name=hg002_chrY_paternal_333.1;source_gene=hg002_chrY_paternal_333;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_333;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_333.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_333.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y-AS1;alternative_source_transcripts=hg002_chrY_paternal_333.1,hg002_chrY_paternal_333.1;transcript_id=HG03009_ch_T0000516;gene_id=HG03009_ch_G0000173;Parent=HG03009_ch_G0000173;transcript_name=hg002_chrY_paternal_333.1;gene_name=NLGN4Y-AS1;ID=HG03009_ch_T0000516;Name=NLGN4Y-AS1
HG03009_chrY	CAT	exon	16815528	16815873	.	-	.	source_transcript=hg002_chrY_paternal_333.1;source_transcript_name=hg002_chrY_paternal_333.1;source_gene=hg002_chrY_paternal_333;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_333;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_333.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y-AS1;alternative_source_transcripts=hg002_chrY_paternal_333.1,hg002_chrY_paternal_333.1;transcript_id=HG03009_ch_T0000516;gene_id=HG03009_ch_G0000173;Parent=HG03009_ch_T0000516;transcript_name=hg002_chrY_paternal_333.1;gene_name=NLGN4Y-AS1;ID=exon:HG03009_ch_T0000516:0;Name=NLGN4Y-AS1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16815874	16820507	.	-	.	source_transcript=hg002_chrY_paternal_333.1;source_transcript_name=hg002_chrY_paternal_333.1;source_gene=hg002_chrY_paternal_333;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_333;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_333.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y-AS1;alternative_source_transcripts=hg002_chrY_paternal_333.1,hg002_chrY_paternal_333.1;transcript_id=HG03009_ch_T0000516;gene_id=HG03009_ch_G0000173;Parent=HG03009_ch_T0000516;transcript_name=hg002_chrY_paternal_333.1;gene_name=NLGN4Y-AS1;ID=intron:HG03009_ch_T0000516:0;Name=NLGN4Y-AS1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16820508	16820595	.	-	.	source_transcript=hg002_chrY_paternal_333.1;source_transcript_name=hg002_chrY_paternal_333.1;source_gene=hg002_chrY_paternal_333;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_333;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_333.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y-AS1;alternative_source_transcripts=hg002_chrY_paternal_333.1,hg002_chrY_paternal_333.1;transcript_id=HG03009_ch_T0000516;gene_id=HG03009_ch_G0000173;Parent=HG03009_ch_T0000516;transcript_name=hg002_chrY_paternal_333.1;gene_name=NLGN4Y-AS1;ID=exon:HG03009_ch_T0000516:1;Name=NLGN4Y-AS1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16820596	16823161	.	-	.	source_transcript=hg002_chrY_paternal_333.1;source_transcript_name=hg002_chrY_paternal_333.1;source_gene=hg002_chrY_paternal_333;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_333;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_333.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y-AS1;alternative_source_transcripts=hg002_chrY_paternal_333.1,hg002_chrY_paternal_333.1;transcript_id=HG03009_ch_T0000516;gene_id=HG03009_ch_G0000173;Parent=HG03009_ch_T0000516;transcript_name=hg002_chrY_paternal_333.1;gene_name=NLGN4Y-AS1;ID=intron:HG03009_ch_T0000516:1;Name=NLGN4Y-AS1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16823162	16823230	.	-	.	source_transcript=hg002_chrY_paternal_333.1;source_transcript_name=hg002_chrY_paternal_333.1;source_gene=hg002_chrY_paternal_333;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_333;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_333.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y-AS1;alternative_source_transcripts=hg002_chrY_paternal_333.1,hg002_chrY_paternal_333.1;transcript_id=HG03009_ch_T0000516;gene_id=HG03009_ch_G0000173;Parent=HG03009_ch_T0000516;transcript_name=hg002_chrY_paternal_333.1;gene_name=NLGN4Y-AS1;ID=exon:HG03009_ch_T0000516:2;Name=NLGN4Y-AS1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	16823231	16825847	.	-	.	source_transcript=hg002_chrY_paternal_333.1;source_transcript_name=hg002_chrY_paternal_333.1;source_gene=hg002_chrY_paternal_333;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_333;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_333.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y-AS1;alternative_source_transcripts=hg002_chrY_paternal_333.1,hg002_chrY_paternal_333.1;transcript_id=HG03009_ch_T0000516;gene_id=HG03009_ch_G0000173;Parent=HG03009_ch_T0000516;transcript_name=hg002_chrY_paternal_333.1;gene_name=NLGN4Y-AS1;ID=intron:HG03009_ch_T0000516:2;Name=NLGN4Y-AS1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	16825848	16825876	.	-	.	source_transcript=hg002_chrY_paternal_333.1;source_transcript_name=hg002_chrY_paternal_333.1;source_gene=hg002_chrY_paternal_333;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_333;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_333.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y-AS1;alternative_source_transcripts=hg002_chrY_paternal_333.1,hg002_chrY_paternal_333.1;transcript_id=HG03009_ch_T0000516;gene_id=HG03009_ch_G0000173;Parent=HG03009_ch_T0000516;transcript_name=hg002_chrY_paternal_333.1;gene_name=NLGN4Y-AS1;ID=exon:HG03009_ch_T0000516:3;Name=NLGN4Y-AS1;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	17269045	17387065	.	-	.	source_gene_common_name=LOC107987355;source_gene=hg002_chrY_paternal_336;alternative_source_transcripts=hg002_chrY_paternal_336.1,hg002_chrY_paternal_336.1;gene_id=HG03009_ch_G0000174;gene_biotype=lncRNA;gene_name=LOC107987355;gene_sources=liftoff;ID=HG03009_ch_G0000174;Name=LOC107987355
HG03009_chrY	CAT	transcript	17269045	17387065	1000	-	.	source_transcript=hg002_chrY_paternal_336.1;source_transcript_name=hg002_chrY_paternal_336.1;source_gene=hg002_chrY_paternal_336;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_336;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_336.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_336.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987355;alternative_source_transcripts=hg002_chrY_paternal_336.1,hg002_chrY_paternal_336.1;transcript_id=HG03009_ch_T0000517;gene_id=HG03009_ch_G0000174;Parent=HG03009_ch_G0000174;transcript_name=hg002_chrY_paternal_336.1;gene_name=LOC107987355;ID=HG03009_ch_T0000517;Name=LOC107987355
HG03009_chrY	CAT	exon	17269045	17269117	.	-	.	source_transcript=hg002_chrY_paternal_336.1;source_transcript_name=hg002_chrY_paternal_336.1;source_gene=hg002_chrY_paternal_336;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_336;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_336.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987355;alternative_source_transcripts=hg002_chrY_paternal_336.1,hg002_chrY_paternal_336.1;transcript_id=HG03009_ch_T0000517;gene_id=HG03009_ch_G0000174;Parent=HG03009_ch_T0000517;transcript_name=hg002_chrY_paternal_336.1;gene_name=LOC107987355;ID=exon:HG03009_ch_T0000517:0;Name=LOC107987355;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	17269118	17370601	.	-	.	source_transcript=hg002_chrY_paternal_336.1;source_transcript_name=hg002_chrY_paternal_336.1;source_gene=hg002_chrY_paternal_336;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_336;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_336.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987355;alternative_source_transcripts=hg002_chrY_paternal_336.1,hg002_chrY_paternal_336.1;transcript_id=HG03009_ch_T0000517;gene_id=HG03009_ch_G0000174;Parent=HG03009_ch_T0000517;transcript_name=hg002_chrY_paternal_336.1;gene_name=LOC107987355;ID=intron:HG03009_ch_T0000517:0;Name=LOC107987355;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	17370602	17370824	.	-	.	source_transcript=hg002_chrY_paternal_336.1;source_transcript_name=hg002_chrY_paternal_336.1;source_gene=hg002_chrY_paternal_336;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_336;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_336.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987355;alternative_source_transcripts=hg002_chrY_paternal_336.1,hg002_chrY_paternal_336.1;transcript_id=HG03009_ch_T0000517;gene_id=HG03009_ch_G0000174;Parent=HG03009_ch_T0000517;transcript_name=hg002_chrY_paternal_336.1;gene_name=LOC107987355;ID=exon:HG03009_ch_T0000517:1;Name=LOC107987355;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	17370825	17386979	.	-	.	source_transcript=hg002_chrY_paternal_336.1;source_transcript_name=hg002_chrY_paternal_336.1;source_gene=hg002_chrY_paternal_336;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_336;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_336.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987355;alternative_source_transcripts=hg002_chrY_paternal_336.1,hg002_chrY_paternal_336.1;transcript_id=HG03009_ch_T0000517;gene_id=HG03009_ch_G0000174;Parent=HG03009_ch_T0000517;transcript_name=hg002_chrY_paternal_336.1;gene_name=LOC107987355;ID=intron:HG03009_ch_T0000517:1;Name=LOC107987355;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	17386980	17387065	.	-	.	source_transcript=hg002_chrY_paternal_336.1;source_transcript_name=hg002_chrY_paternal_336.1;source_gene=hg002_chrY_paternal_336;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_336;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_336.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987355;alternative_source_transcripts=hg002_chrY_paternal_336.1,hg002_chrY_paternal_336.1;transcript_id=HG03009_ch_T0000517;gene_id=HG03009_ch_G0000174;Parent=HG03009_ch_T0000517;transcript_name=hg002_chrY_paternal_336.1;gene_name=LOC107987355;ID=exon:HG03009_ch_T0000517:2;Name=LOC107987355;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	18160241	18160372	.	-	.	source_gene_common_name=LOC124900508;source_gene=hg002_chrY_paternal_339;alternative_source_transcripts=hg002_chrY_paternal_339.1,hg002_chrY_paternal_339.1;gene_id=HG03009_ch_G0000175;gene_biotype=snoRNA;gene_name=LOC124900508;gene_sources=liftoff;ID=HG03009_ch_G0000175;Name=LOC124900508
HG03009_chrY	CAT	transcript	18160241	18160372	1000	-	.	source_transcript=hg002_chrY_paternal_339.1;source_transcript_name=hg002_chrY_paternal_339.1;source_gene=hg002_chrY_paternal_339;source_gene_biotype=snoRNA;original_gene_id=hg002_chrY_paternal_339;gene_biotype=snoRNA;transcript_biotype=snoRNA;alignment_id=hg002_chrY_paternal_339.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_339.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124900508;alternative_source_transcripts=hg002_chrY_paternal_339.1,hg002_chrY_paternal_339.1;transcript_id=HG03009_ch_T0000518;gene_id=HG03009_ch_G0000175;Parent=HG03009_ch_G0000175;transcript_name=hg002_chrY_paternal_339.1;gene_name=LOC124900508;ID=HG03009_ch_T0000518;Name=LOC124900508
HG03009_chrY	CAT	exon	18160241	18160372	.	-	.	source_transcript=hg002_chrY_paternal_339.1;source_transcript_name=hg002_chrY_paternal_339.1;source_gene=hg002_chrY_paternal_339;source_gene_biotype=snoRNA;original_gene_id=hg002_chrY_paternal_339;gene_biotype=snoRNA;transcript_biotype=snoRNA;alignment_id=hg002_chrY_paternal_339.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_339.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124900508;alternative_source_transcripts=hg002_chrY_paternal_339.1,hg002_chrY_paternal_339.1;transcript_id=HG03009_ch_T0000518;gene_id=HG03009_ch_G0000175;Parent=HG03009_ch_T0000518;transcript_name=hg002_chrY_paternal_339.1;gene_name=LOC124900508;ID=exon:HG03009_ch_T0000518:0;Name=LOC124900508;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	19522914	19538694	.	+	.	source_gene_common_name=FAM41AY2;source_gene=hg002_chrY_paternal_344;alternative_source_transcripts=hg002_chrY_paternal_344.1;gene_id=HG03009_ch_G0000176;gene_biotype=lncRNA;gene_name=FAM41AY2;gene_sources=liftoff;ID=HG03009_ch_G0000176;Name=FAM41AY2
HG03009_chrY	CAT	transcript	19522914	19538694	1000	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1;transcript_id=HG03009_ch_T0000519;gene_id=HG03009_ch_G0000176;Parent=HG03009_ch_G0000176;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=HG03009_ch_T0000519;Name=FAM41AY2
HG03009_chrY	CAT	exon	19522914	19523071	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1;transcript_id=HG03009_ch_T0000519;gene_id=HG03009_ch_G0000176;Parent=HG03009_ch_T0000519;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=exon:HG03009_ch_T0000519:0;Name=FAM41AY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	19523072	19523666	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1;transcript_id=HG03009_ch_T0000519;gene_id=HG03009_ch_G0000176;Parent=HG03009_ch_T0000519;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=intron:HG03009_ch_T0000519:0;Name=FAM41AY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	19523667	19523716	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1;transcript_id=HG03009_ch_T0000519;gene_id=HG03009_ch_G0000176;Parent=HG03009_ch_T0000519;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=exon:HG03009_ch_T0000519:1;Name=FAM41AY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	19523717	19535049	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1;transcript_id=HG03009_ch_T0000519;gene_id=HG03009_ch_G0000176;Parent=HG03009_ch_T0000519;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=intron:HG03009_ch_T0000519:1;Name=FAM41AY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	19535050	19535178	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1;transcript_id=HG03009_ch_T0000519;gene_id=HG03009_ch_G0000176;Parent=HG03009_ch_T0000519;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=exon:HG03009_ch_T0000519:2;Name=FAM41AY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	19535179	19535425	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1;transcript_id=HG03009_ch_T0000519;gene_id=HG03009_ch_G0000176;Parent=HG03009_ch_T0000519;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=intron:HG03009_ch_T0000519:2;Name=FAM41AY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	19535426	19535519	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1;transcript_id=HG03009_ch_T0000519;gene_id=HG03009_ch_G0000176;Parent=HG03009_ch_T0000519;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=exon:HG03009_ch_T0000519:3;Name=FAM41AY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	19535520	19536112	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1;transcript_id=HG03009_ch_T0000519;gene_id=HG03009_ch_G0000176;Parent=HG03009_ch_T0000519;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=intron:HG03009_ch_T0000519:3;Name=FAM41AY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	19536113	19536283	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1;transcript_id=HG03009_ch_T0000519;gene_id=HG03009_ch_G0000176;Parent=HG03009_ch_T0000519;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=exon:HG03009_ch_T0000519:4;Name=FAM41AY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	19536284	19536392	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1;transcript_id=HG03009_ch_T0000519;gene_id=HG03009_ch_G0000176;Parent=HG03009_ch_T0000519;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=intron:HG03009_ch_T0000519:4;Name=FAM41AY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	19536393	19536486	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1;transcript_id=HG03009_ch_T0000519;gene_id=HG03009_ch_G0000176;Parent=HG03009_ch_T0000519;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=exon:HG03009_ch_T0000519:5;Name=FAM41AY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	19536487	19536760	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1;transcript_id=HG03009_ch_T0000519;gene_id=HG03009_ch_G0000176;Parent=HG03009_ch_T0000519;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=intron:HG03009_ch_T0000519:5;Name=FAM41AY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	19536761	19536970	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1;transcript_id=HG03009_ch_T0000519;gene_id=HG03009_ch_G0000176;Parent=HG03009_ch_T0000519;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=exon:HG03009_ch_T0000519:6;Name=FAM41AY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	19536971	19537263	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1;transcript_id=HG03009_ch_T0000519;gene_id=HG03009_ch_G0000176;Parent=HG03009_ch_T0000519;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=intron:HG03009_ch_T0000519:6;Name=FAM41AY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	19537264	19537451	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1;transcript_id=HG03009_ch_T0000519;gene_id=HG03009_ch_G0000176;Parent=HG03009_ch_T0000519;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=exon:HG03009_ch_T0000519:7;Name=FAM41AY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	19537452	19537663	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1;transcript_id=HG03009_ch_T0000519;gene_id=HG03009_ch_G0000176;Parent=HG03009_ch_T0000519;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=intron:HG03009_ch_T0000519:7;Name=FAM41AY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	19537664	19537885	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1;transcript_id=HG03009_ch_T0000519;gene_id=HG03009_ch_G0000176;Parent=HG03009_ch_T0000519;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=exon:HG03009_ch_T0000519:8;Name=FAM41AY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	19537886	19537967	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1;transcript_id=HG03009_ch_T0000519;gene_id=HG03009_ch_G0000176;Parent=HG03009_ch_T0000519;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=intron:HG03009_ch_T0000519:8;Name=FAM41AY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	19537968	19538694	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1;transcript_id=HG03009_ch_T0000519;gene_id=HG03009_ch_G0000176;Parent=HG03009_ch_T0000519;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=exon:HG03009_ch_T0000519:9;Name=FAM41AY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	19576098	19580789	.	-	.	source_gene_common_name=LOC105377220;source_gene=hg002_chrY_paternal_391;gene_id=HG03009_ch_G0000177;gene_biotype=lncRNA;gene_name=LOC105377220;gene_sources=liftoff;ID=HG03009_ch_G0000177;Name=LOC105377220
HG03009_chrY	CAT	transcript	19576098	19580789	1000	-	.	source_transcript=hg002_chrY_paternal_391.1;source_transcript_name=hg002_chrY_paternal_391.1;source_gene=hg002_chrY_paternal_391;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_391;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_391.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_391.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377220;transcript_id=HG03009_ch_T0000520;gene_id=HG03009_ch_G0000177;Parent=HG03009_ch_G0000177;transcript_name=hg002_chrY_paternal_391.1;gene_name=LOC105377220;ID=HG03009_ch_T0000520;Name=LOC105377220
HG03009_chrY	CAT	exon	19576098	19577964	.	-	.	source_transcript=hg002_chrY_paternal_391.1;source_transcript_name=hg002_chrY_paternal_391.1;source_gene=hg002_chrY_paternal_391;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_391;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_391.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_391.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377220;transcript_id=HG03009_ch_T0000520;gene_id=HG03009_ch_G0000177;Parent=HG03009_ch_T0000520;transcript_name=hg002_chrY_paternal_391.1;gene_name=LOC105377220;ID=exon:HG03009_ch_T0000520:0;Name=LOC105377220;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	19577965	19578674	.	-	.	source_transcript=hg002_chrY_paternal_391.1;source_transcript_name=hg002_chrY_paternal_391.1;source_gene=hg002_chrY_paternal_391;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_391;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_391.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_391.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377220;transcript_id=HG03009_ch_T0000520;gene_id=HG03009_ch_G0000177;Parent=HG03009_ch_T0000520;transcript_name=hg002_chrY_paternal_391.1;gene_name=LOC105377220;ID=intron:HG03009_ch_T0000520:0;Name=LOC105377220;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	19578675	19578803	.	-	.	source_transcript=hg002_chrY_paternal_391.1;source_transcript_name=hg002_chrY_paternal_391.1;source_gene=hg002_chrY_paternal_391;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_391;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_391.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_391.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377220;transcript_id=HG03009_ch_T0000520;gene_id=HG03009_ch_G0000177;Parent=HG03009_ch_T0000520;transcript_name=hg002_chrY_paternal_391.1;gene_name=LOC105377220;ID=exon:HG03009_ch_T0000520:1;Name=LOC105377220;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	19578804	19580014	.	-	.	source_transcript=hg002_chrY_paternal_391.1;source_transcript_name=hg002_chrY_paternal_391.1;source_gene=hg002_chrY_paternal_391;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_391;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_391.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_391.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377220;transcript_id=HG03009_ch_T0000520;gene_id=HG03009_ch_G0000177;Parent=HG03009_ch_T0000520;transcript_name=hg002_chrY_paternal_391.1;gene_name=LOC105377220;ID=intron:HG03009_ch_T0000520:1;Name=LOC105377220;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	19580015	19580789	.	-	.	source_transcript=hg002_chrY_paternal_391.1;source_transcript_name=hg002_chrY_paternal_391.1;source_gene=hg002_chrY_paternal_391;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_391;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_391.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_391.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377220;transcript_id=HG03009_ch_T0000520;gene_id=HG03009_ch_G0000177;Parent=HG03009_ch_T0000520;transcript_name=hg002_chrY_paternal_391.1;gene_name=LOC105377220;ID=exon:HG03009_ch_T0000520:2;Name=LOC105377220;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	19597136	19601435	.	-	.	source_gene_common_name=FAM224A;source_gene=hg002_chrY_paternal_349;alternative_source_transcripts=hg002_chrY_paternal_349.1;gene_id=HG03009_ch_G0000178;gene_biotype=lncRNA;gene_name=FAM224A;gene_sources=liftoff;ID=HG03009_ch_G0000178;Name=FAM224A
HG03009_chrY	CAT	transcript	19597136	19601435	1000	-	.	source_transcript=hg002_chrY_paternal_349.1;source_transcript_name=hg002_chrY_paternal_349.1;source_gene=hg002_chrY_paternal_349;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_349;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_349.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_349.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=hg002_chrY_paternal_349.1;transcript_id=HG03009_ch_T0000521;gene_id=HG03009_ch_G0000178;Parent=HG03009_ch_G0000178;transcript_name=hg002_chrY_paternal_349.1;gene_name=FAM224A;ID=HG03009_ch_T0000521;Name=FAM224A
HG03009_chrY	CAT	exon	19597136	19597319	.	-	.	source_transcript=hg002_chrY_paternal_349.1;source_transcript_name=hg002_chrY_paternal_349.1;source_gene=hg002_chrY_paternal_349;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_349;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_349.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_349.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=hg002_chrY_paternal_349.1;transcript_id=HG03009_ch_T0000521;gene_id=HG03009_ch_G0000178;Parent=HG03009_ch_T0000521;transcript_name=hg002_chrY_paternal_349.1;gene_name=FAM224A;ID=exon:HG03009_ch_T0000521:0;Name=FAM224A;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	19597320	19598654	.	-	.	source_transcript=hg002_chrY_paternal_349.1;source_transcript_name=hg002_chrY_paternal_349.1;source_gene=hg002_chrY_paternal_349;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_349;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_349.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_349.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=hg002_chrY_paternal_349.1;transcript_id=HG03009_ch_T0000521;gene_id=HG03009_ch_G0000178;Parent=HG03009_ch_T0000521;transcript_name=hg002_chrY_paternal_349.1;gene_name=FAM224A;ID=intron:HG03009_ch_T0000521:0;Name=FAM224A;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	19598655	19598772	.	-	.	source_transcript=hg002_chrY_paternal_349.1;source_transcript_name=hg002_chrY_paternal_349.1;source_gene=hg002_chrY_paternal_349;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_349;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_349.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_349.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=hg002_chrY_paternal_349.1;transcript_id=HG03009_ch_T0000521;gene_id=HG03009_ch_G0000178;Parent=HG03009_ch_T0000521;transcript_name=hg002_chrY_paternal_349.1;gene_name=FAM224A;ID=exon:HG03009_ch_T0000521:1;Name=FAM224A;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	19598773	19601277	.	-	.	source_transcript=hg002_chrY_paternal_349.1;source_transcript_name=hg002_chrY_paternal_349.1;source_gene=hg002_chrY_paternal_349;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_349;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_349.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_349.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=hg002_chrY_paternal_349.1;transcript_id=HG03009_ch_T0000521;gene_id=HG03009_ch_G0000178;Parent=HG03009_ch_T0000521;transcript_name=hg002_chrY_paternal_349.1;gene_name=FAM224A;ID=intron:HG03009_ch_T0000521:1;Name=FAM224A;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	19601278	19601435	.	-	.	source_transcript=hg002_chrY_paternal_349.1;source_transcript_name=hg002_chrY_paternal_349.1;source_gene=hg002_chrY_paternal_349;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_349;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_349.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_349.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=hg002_chrY_paternal_349.1;transcript_id=HG03009_ch_T0000521;gene_id=HG03009_ch_G0000178;Parent=HG03009_ch_T0000521;transcript_name=hg002_chrY_paternal_349.1;gene_name=FAM224A;ID=exon:HG03009_ch_T0000521:2;Name=FAM224A;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	19710462	19711262	.	-	.	source_gene_common_name=LOC105377219;source_gene=hg002_chrY_paternal_352;alternative_source_transcripts=hg002_chrY_paternal_352.1;gene_id=HG03009_ch_G0000179;gene_biotype=lncRNA;gene_name=LOC105377219;gene_sources=liftoff;ID=HG03009_ch_G0000179;Name=LOC105377219
HG03009_chrY	CAT	transcript	19710462	19711262	1000	-	.	source_transcript=hg002_chrY_paternal_352.1;source_transcript_name=hg002_chrY_paternal_352.1;source_gene=hg002_chrY_paternal_352;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_352;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_352.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_352.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377219;alternative_source_transcripts=hg002_chrY_paternal_352.1;transcript_id=HG03009_ch_T0000522;gene_id=HG03009_ch_G0000179;Parent=HG03009_ch_G0000179;transcript_name=hg002_chrY_paternal_352.1;gene_name=LOC105377219;ID=HG03009_ch_T0000522;Name=LOC105377219
HG03009_chrY	CAT	exon	19710462	19710918	.	-	.	source_transcript=hg002_chrY_paternal_352.1;source_transcript_name=hg002_chrY_paternal_352.1;source_gene=hg002_chrY_paternal_352;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_352;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_352.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_352.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377219;alternative_source_transcripts=hg002_chrY_paternal_352.1;transcript_id=HG03009_ch_T0000522;gene_id=HG03009_ch_G0000179;Parent=HG03009_ch_T0000522;transcript_name=hg002_chrY_paternal_352.1;gene_name=LOC105377219;ID=exon:HG03009_ch_T0000522:0;Name=LOC105377219;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	19710919	19711006	.	-	.	source_transcript=hg002_chrY_paternal_352.1;source_transcript_name=hg002_chrY_paternal_352.1;source_gene=hg002_chrY_paternal_352;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_352;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_352.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_352.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377219;alternative_source_transcripts=hg002_chrY_paternal_352.1;transcript_id=HG03009_ch_T0000522;gene_id=HG03009_ch_G0000179;Parent=HG03009_ch_T0000522;transcript_name=hg002_chrY_paternal_352.1;gene_name=LOC105377219;ID=intron:HG03009_ch_T0000522:0;Name=LOC105377219;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	19711007	19711092	.	-	.	source_transcript=hg002_chrY_paternal_352.1;source_transcript_name=hg002_chrY_paternal_352.1;source_gene=hg002_chrY_paternal_352;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_352;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_352.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_352.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377219;alternative_source_transcripts=hg002_chrY_paternal_352.1;transcript_id=HG03009_ch_T0000522;gene_id=HG03009_ch_G0000179;Parent=HG03009_ch_T0000522;transcript_name=hg002_chrY_paternal_352.1;gene_name=LOC105377219;ID=exon:HG03009_ch_T0000522:1;Name=LOC105377219;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	19711093	19711179	.	-	.	source_transcript=hg002_chrY_paternal_352.1;source_transcript_name=hg002_chrY_paternal_352.1;source_gene=hg002_chrY_paternal_352;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_352;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_352.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_352.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377219;alternative_source_transcripts=hg002_chrY_paternal_352.1;transcript_id=HG03009_ch_T0000522;gene_id=HG03009_ch_G0000179;Parent=HG03009_ch_T0000522;transcript_name=hg002_chrY_paternal_352.1;gene_name=LOC105377219;ID=intron:HG03009_ch_T0000522:1;Name=LOC105377219;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	19711180	19711262	.	-	.	source_transcript=hg002_chrY_paternal_352.1;source_transcript_name=hg002_chrY_paternal_352.1;source_gene=hg002_chrY_paternal_352;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_352;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_352.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_352.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377219;alternative_source_transcripts=hg002_chrY_paternal_352.1;transcript_id=HG03009_ch_T0000522;gene_id=HG03009_ch_G0000179;Parent=HG03009_ch_T0000522;transcript_name=hg002_chrY_paternal_352.1;gene_name=LOC105377219;ID=exon:HG03009_ch_T0000522:2;Name=LOC105377219;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	19714880	19721739	.	-	.	source_gene_common_name=LOC124905303;source_gene=hg002_chrY_paternal_353;alternative_source_transcripts=hg002_chrY_paternal_353.1;gene_id=HG03009_ch_G0000180;gene_biotype=lncRNA;gene_name=LOC124905303;gene_sources=liftoff;ID=HG03009_ch_G0000180;Name=LOC124905303
HG03009_chrY	CAT	transcript	19714880	19721739	1000	-	.	source_transcript=hg002_chrY_paternal_353.1;source_transcript_name=hg002_chrY_paternal_353.1;source_gene=hg002_chrY_paternal_353;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_353;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_353.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_353.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905303;alternative_source_transcripts=hg002_chrY_paternal_353.1;transcript_id=HG03009_ch_T0000523;gene_id=HG03009_ch_G0000180;Parent=HG03009_ch_G0000180;transcript_name=hg002_chrY_paternal_353.1;gene_name=LOC124905303;ID=HG03009_ch_T0000523;Name=LOC124905303
HG03009_chrY	CAT	exon	19714880	19718824	.	-	.	source_transcript=hg002_chrY_paternal_353.1;source_transcript_name=hg002_chrY_paternal_353.1;source_gene=hg002_chrY_paternal_353;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_353;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_353.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_353.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905303;alternative_source_transcripts=hg002_chrY_paternal_353.1;transcript_id=HG03009_ch_T0000523;gene_id=HG03009_ch_G0000180;Parent=HG03009_ch_T0000523;transcript_name=hg002_chrY_paternal_353.1;gene_name=LOC124905303;ID=exon:HG03009_ch_T0000523:0;Name=LOC124905303;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	19718825	19718912	.	-	.	source_transcript=hg002_chrY_paternal_353.1;source_transcript_name=hg002_chrY_paternal_353.1;source_gene=hg002_chrY_paternal_353;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_353;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_353.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_353.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905303;alternative_source_transcripts=hg002_chrY_paternal_353.1;transcript_id=HG03009_ch_T0000523;gene_id=HG03009_ch_G0000180;Parent=HG03009_ch_T0000523;transcript_name=hg002_chrY_paternal_353.1;gene_name=LOC124905303;ID=intron:HG03009_ch_T0000523:0;Name=LOC124905303;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	19718913	19719661	.	-	.	source_transcript=hg002_chrY_paternal_353.1;source_transcript_name=hg002_chrY_paternal_353.1;source_gene=hg002_chrY_paternal_353;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_353;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_353.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_353.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905303;alternative_source_transcripts=hg002_chrY_paternal_353.1;transcript_id=HG03009_ch_T0000523;gene_id=HG03009_ch_G0000180;Parent=HG03009_ch_T0000523;transcript_name=hg002_chrY_paternal_353.1;gene_name=LOC124905303;ID=exon:HG03009_ch_T0000523:1;Name=LOC124905303;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	19719662	19719748	.	-	.	source_transcript=hg002_chrY_paternal_353.1;source_transcript_name=hg002_chrY_paternal_353.1;source_gene=hg002_chrY_paternal_353;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_353;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_353.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_353.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905303;alternative_source_transcripts=hg002_chrY_paternal_353.1;transcript_id=HG03009_ch_T0000523;gene_id=HG03009_ch_G0000180;Parent=HG03009_ch_T0000523;transcript_name=hg002_chrY_paternal_353.1;gene_name=LOC124905303;ID=intron:HG03009_ch_T0000523:1;Name=LOC124905303;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	19719749	19721739	.	-	.	source_transcript=hg002_chrY_paternal_353.1;source_transcript_name=hg002_chrY_paternal_353.1;source_gene=hg002_chrY_paternal_353;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_353;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_353.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_353.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905303;alternative_source_transcripts=hg002_chrY_paternal_353.1;transcript_id=HG03009_ch_T0000523;gene_id=HG03009_ch_G0000180;Parent=HG03009_ch_T0000523;transcript_name=hg002_chrY_paternal_353.1;gene_name=LOC124905303;ID=exon:HG03009_ch_T0000523:2;Name=LOC124905303;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	19790932	19792512	.	-	.	source_gene_common_name=XKRY2;source_gene=hg002_chrY_paternal_380;alternative_source_transcripts=hg002_chrY_paternal_358.1;gene_id=HG03009_ch_G0000181;gene_biotype=transcribed_pseudogene;gene_name=XKRY2;gene_sources=liftoff;ID=HG03009_ch_G0000181;Name=XKRY2
HG03009_chrY	CAT	transcript	19790932	19792512	1000	-	.	source_transcript=hg002_chrY_paternal_380.1;source_transcript_name=hg002_chrY_paternal_380.1;source_gene=hg002_chrY_paternal_380;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_380;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_380.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_380.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRY2;alternative_source_transcripts=hg002_chrY_paternal_358.1;transcript_id=HG03009_ch_T0000524;gene_id=HG03009_ch_G0000181;Parent=HG03009_ch_G0000181;transcript_name=hg002_chrY_paternal_380.1;gene_name=XKRY2;ID=HG03009_ch_T0000524;Name=XKRY2
HG03009_chrY	CAT	exon	19790932	19792512	.	-	.	source_transcript=hg002_chrY_paternal_380.1;source_transcript_name=hg002_chrY_paternal_380.1;source_gene=hg002_chrY_paternal_380;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_380;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_380.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_380.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRY2;alternative_source_transcripts=hg002_chrY_paternal_358.1;transcript_id=HG03009_ch_T0000524;gene_id=HG03009_ch_G0000181;Parent=HG03009_ch_T0000524;transcript_name=hg002_chrY_paternal_380.1;gene_name=XKRY2;ID=exon:HG03009_ch_T0000524:0;Name=XKRY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	19900226	19902185	.	-	.	source_gene_common_name=CDY2A;source_gene=hg002_chrY_paternal_365;alternative_source_transcripts=hg002_chrY_paternal_365.1;gene_id=HG03009_ch_G0000182;gene_biotype=protein_coding;gene_name=CDY2A;gene_sources=liftoff,augTM;ID=HG03009_ch_G0000182;Name=CDY2A
HG03009_chrY	CAT	transcript	19900226	19902185	100	-	.	source_transcript=hg002_chrY_paternal_365.1;source_transcript_name=hg002_chrY_paternal_365.1;source_gene=hg002_chrY_paternal_365;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_365;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_365.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_365.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2A;alternative_source_transcripts=hg002_chrY_paternal_365.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000525;gene_id=HG03009_ch_G0000182;Parent=HG03009_ch_G0000182;transcript_name=hg002_chrY_paternal_365.1;gene_name=CDY2A;ID=HG03009_ch_T0000525;Name=CDY2A
HG03009_chrY	CAT	exon	19900226	19902185	.	-	.	source_transcript=hg002_chrY_paternal_365.1;source_transcript_name=hg002_chrY_paternal_365.1;source_gene=hg002_chrY_paternal_365;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_365;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_365.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_365.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2A;alternative_source_transcripts=hg002_chrY_paternal_365.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000525;gene_id=HG03009_ch_G0000182;Parent=HG03009_ch_T0000525;transcript_name=hg002_chrY_paternal_365.1;gene_name=CDY2A;ID=exon:HG03009_ch_T0000525:0;Name=CDY2A;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	19900232	19901857	.	-	0	source_transcript=hg002_chrY_paternal_365.1;source_transcript_name=hg002_chrY_paternal_365.1;source_gene=hg002_chrY_paternal_365;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_365;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_365.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_365.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2A;alternative_source_transcripts=hg002_chrY_paternal_365.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000525;gene_id=HG03009_ch_G0000182;Parent=HG03009_ch_T0000525;transcript_name=hg002_chrY_paternal_365.1;gene_name=CDY2A;ID=CDS:HG03009_ch_T0000525:0;Name=CDY2A;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	19900232	19900234	.	-	0	source_transcript=hg002_chrY_paternal_365.1;source_transcript_name=hg002_chrY_paternal_365.1;source_gene=hg002_chrY_paternal_365;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_365;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_365.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_365.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2A;alternative_source_transcripts=hg002_chrY_paternal_365.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000525;gene_id=HG03009_ch_G0000182;Parent=HG03009_ch_T0000525;transcript_name=hg002_chrY_paternal_365.1;gene_name=CDY2A;ID=stop_codon:HG03009_ch_T0000525;Name=CDY2A;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	19901855	19901857	.	-	0	source_transcript=hg002_chrY_paternal_365.1;source_transcript_name=hg002_chrY_paternal_365.1;source_gene=hg002_chrY_paternal_365;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_365;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_365.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_365.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2A;alternative_source_transcripts=hg002_chrY_paternal_365.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000525;gene_id=HG03009_ch_G0000182;Parent=HG03009_ch_T0000525;transcript_name=hg002_chrY_paternal_365.1;gene_name=CDY2A;ID=start_codon:HG03009_ch_T0000525;Name=CDY2A;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	20047772	20049732	.	+	.	source_gene_common_name=CDY2B;source_gene=hg002_chrY_paternal_373;alternative_source_transcripts=hg002_chrY_paternal_373.1;gene_id=HG03009_ch_G0000183;gene_biotype=protein_coding;gene_name=CDY2B;gene_sources=liftoff,augTM;ID=HG03009_ch_G0000183;Name=CDY2B
HG03009_chrY	CAT	transcript	20047772	20049732	100	+	.	source_transcript=hg002_chrY_paternal_373.1;source_transcript_name=hg002_chrY_paternal_373.1;source_gene=hg002_chrY_paternal_373;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_373;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_373.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_373.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2B;alternative_source_transcripts=hg002_chrY_paternal_373.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000526;gene_id=HG03009_ch_G0000183;Parent=HG03009_ch_G0000183;transcript_name=hg002_chrY_paternal_373.1;gene_name=CDY2B;ID=HG03009_ch_T0000526;Name=CDY2B
HG03009_chrY	CAT	exon	20047772	20049732	.	+	.	source_transcript=hg002_chrY_paternal_373.1;source_transcript_name=hg002_chrY_paternal_373.1;source_gene=hg002_chrY_paternal_373;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_373;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_373.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_373.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2B;alternative_source_transcripts=hg002_chrY_paternal_373.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000526;gene_id=HG03009_ch_G0000183;Parent=HG03009_ch_T0000526;transcript_name=hg002_chrY_paternal_373.1;gene_name=CDY2B;ID=exon:HG03009_ch_T0000526:0;Name=CDY2B;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	20048100	20049725	.	+	0	source_transcript=hg002_chrY_paternal_373.1;source_transcript_name=hg002_chrY_paternal_373.1;source_gene=hg002_chrY_paternal_373;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_373;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_373.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_373.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2B;alternative_source_transcripts=hg002_chrY_paternal_373.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000526;gene_id=HG03009_ch_G0000183;Parent=HG03009_ch_T0000526;transcript_name=hg002_chrY_paternal_373.1;gene_name=CDY2B;ID=CDS:HG03009_ch_T0000526:0;Name=CDY2B;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	20048100	20048102	.	+	0	source_transcript=hg002_chrY_paternal_373.1;source_transcript_name=hg002_chrY_paternal_373.1;source_gene=hg002_chrY_paternal_373;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_373;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_373.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_373.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2B;alternative_source_transcripts=hg002_chrY_paternal_373.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000526;gene_id=HG03009_ch_G0000183;Parent=HG03009_ch_T0000526;transcript_name=hg002_chrY_paternal_373.1;gene_name=CDY2B;ID=start_codon:HG03009_ch_T0000526;Name=CDY2B;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	20049723	20049725	.	+	0	source_transcript=hg002_chrY_paternal_373.1;source_transcript_name=hg002_chrY_paternal_373.1;source_gene=hg002_chrY_paternal_373;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_373;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_373.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_373.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2B;alternative_source_transcripts=hg002_chrY_paternal_373.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000526;gene_id=HG03009_ch_G0000183;Parent=HG03009_ch_T0000526;transcript_name=hg002_chrY_paternal_373.1;gene_name=CDY2B;ID=stop_codon:HG03009_ch_T0000526;Name=CDY2B;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	20157439	20159019	.	+	.	source_gene_common_name=XKRY;source_gene=hg002_chrY_paternal_358;alternative_source_transcripts=hg002_chrY_paternal_380.1;gene_id=HG03009_ch_G0000184;gene_biotype=transcribed_pseudogene;gene_name=XKRY;gene_sources=liftoff;ID=HG03009_ch_G0000184;Name=XKRY
HG03009_chrY	CAT	transcript	20157439	20159019	1000	+	.	source_transcript=hg002_chrY_paternal_358.1;source_transcript_name=hg002_chrY_paternal_358.1;source_gene=hg002_chrY_paternal_358;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_358;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_358.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_358.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRY;alternative_source_transcripts=hg002_chrY_paternal_380.1;transcript_id=HG03009_ch_T0000527;gene_id=HG03009_ch_G0000184;Parent=HG03009_ch_G0000184;transcript_name=hg002_chrY_paternal_358.1;gene_name=XKRY;ID=HG03009_ch_T0000527;Name=XKRY
HG03009_chrY	CAT	exon	20157439	20159019	.	+	.	source_transcript=hg002_chrY_paternal_358.1;source_transcript_name=hg002_chrY_paternal_358.1;source_gene=hg002_chrY_paternal_358;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_358;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_358.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_358.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRY;alternative_source_transcripts=hg002_chrY_paternal_380.1;transcript_id=HG03009_ch_T0000527;gene_id=HG03009_ch_G0000184;Parent=HG03009_ch_T0000527;transcript_name=hg002_chrY_paternal_358.1;gene_name=XKRY;ID=exon:HG03009_ch_T0000527:0;Name=XKRY;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	20228208	20235069	.	+	.	source_gene_common_name=LOC124905302;source_gene=hg002_chrY_paternal_385;gene_id=HG03009_ch_G0000185;gene_biotype=lncRNA;gene_name=LOC124905302;gene_sources=liftoff,transMap;ID=HG03009_ch_G0000185;Name=LOC124905302
HG03009_chrY	CAT	transcript	20228208	20235069	1000	+	.	source_transcript=hg002_chrY_paternal_385.1;source_transcript_name=hg002_chrY_paternal_385.1;source_gene=hg002_chrY_paternal_385;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_385;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_385.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_385.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905302;AdditionalSources=liftoff;transcript_id=HG03009_ch_T0000528;gene_id=HG03009_ch_G0000185;Parent=HG03009_ch_G0000185;transcript_name=hg002_chrY_paternal_385.1;gene_name=LOC124905302;ID=HG03009_ch_T0000528;Name=LOC124905302
HG03009_chrY	CAT	exon	20228208	20230200	.	+	.	source_transcript=hg002_chrY_paternal_385.1;source_transcript_name=hg002_chrY_paternal_385.1;source_gene=hg002_chrY_paternal_385;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_385;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_385.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_385.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905302;AdditionalSources=liftoff;transcript_id=HG03009_ch_T0000528;gene_id=HG03009_ch_G0000185;Parent=HG03009_ch_T0000528;transcript_name=hg002_chrY_paternal_385.1;gene_name=LOC124905302;ID=exon:HG03009_ch_T0000528:0;Name=LOC124905302;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	20230201	20230287	.	+	.	source_transcript=hg002_chrY_paternal_385.1;source_transcript_name=hg002_chrY_paternal_385.1;source_gene=hg002_chrY_paternal_385;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_385;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_385.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_385.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905302;AdditionalSources=liftoff;transcript_id=HG03009_ch_T0000528;gene_id=HG03009_ch_G0000185;Parent=HG03009_ch_T0000528;transcript_name=hg002_chrY_paternal_385.1;gene_name=LOC124905302;ID=intron:HG03009_ch_T0000528:0;Name=LOC124905302;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	20230288	20231036	.	+	.	source_transcript=hg002_chrY_paternal_385.1;source_transcript_name=hg002_chrY_paternal_385.1;source_gene=hg002_chrY_paternal_385;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_385;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_385.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_385.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905302;AdditionalSources=liftoff;transcript_id=HG03009_ch_T0000528;gene_id=HG03009_ch_G0000185;Parent=HG03009_ch_T0000528;transcript_name=hg002_chrY_paternal_385.1;gene_name=LOC124905302;ID=exon:HG03009_ch_T0000528:1;Name=LOC124905302;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	20231037	20231124	.	+	.	source_transcript=hg002_chrY_paternal_385.1;source_transcript_name=hg002_chrY_paternal_385.1;source_gene=hg002_chrY_paternal_385;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_385;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_385.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_385.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905302;AdditionalSources=liftoff;transcript_id=HG03009_ch_T0000528;gene_id=HG03009_ch_G0000185;Parent=HG03009_ch_T0000528;transcript_name=hg002_chrY_paternal_385.1;gene_name=LOC124905302;ID=intron:HG03009_ch_T0000528:1;Name=LOC124905302;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	20231125	20235069	.	+	.	source_transcript=hg002_chrY_paternal_385.1;source_transcript_name=hg002_chrY_paternal_385.1;source_gene=hg002_chrY_paternal_385;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_385;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_385.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_385.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905302;AdditionalSources=liftoff;transcript_id=HG03009_ch_T0000528;gene_id=HG03009_ch_G0000185;Parent=HG03009_ch_T0000528;transcript_name=hg002_chrY_paternal_385.1;gene_name=LOC124905302;ID=exon:HG03009_ch_T0000528:2;Name=LOC124905302;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	20238687	20239487	.	+	.	source_gene_common_name=LOC105377218;source_gene=hg002_chrY_paternal_386;alternative_source_transcripts=hg002_chrY_paternal_386.1;gene_id=HG03009_ch_G0000186;gene_biotype=lncRNA;gene_name=LOC105377218;gene_sources=liftoff;ID=HG03009_ch_G0000186;Name=LOC105377218
HG03009_chrY	CAT	transcript	20238687	20239487	1000	+	.	source_transcript=hg002_chrY_paternal_386.1;source_transcript_name=hg002_chrY_paternal_386.1;source_gene=hg002_chrY_paternal_386;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_386;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_386.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_386.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377218;alternative_source_transcripts=hg002_chrY_paternal_386.1;transcript_id=HG03009_ch_T0000529;gene_id=HG03009_ch_G0000186;Parent=HG03009_ch_G0000186;transcript_name=hg002_chrY_paternal_386.1;gene_name=LOC105377218;ID=HG03009_ch_T0000529;Name=LOC105377218
HG03009_chrY	CAT	exon	20238687	20238769	.	+	.	source_transcript=hg002_chrY_paternal_386.1;source_transcript_name=hg002_chrY_paternal_386.1;source_gene=hg002_chrY_paternal_386;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_386;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_386.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_386.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377218;alternative_source_transcripts=hg002_chrY_paternal_386.1;transcript_id=HG03009_ch_T0000529;gene_id=HG03009_ch_G0000186;Parent=HG03009_ch_T0000529;transcript_name=hg002_chrY_paternal_386.1;gene_name=LOC105377218;ID=exon:HG03009_ch_T0000529:0;Name=LOC105377218;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	20238770	20238856	.	+	.	source_transcript=hg002_chrY_paternal_386.1;source_transcript_name=hg002_chrY_paternal_386.1;source_gene=hg002_chrY_paternal_386;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_386;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_386.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_386.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377218;alternative_source_transcripts=hg002_chrY_paternal_386.1;transcript_id=HG03009_ch_T0000529;gene_id=HG03009_ch_G0000186;Parent=HG03009_ch_T0000529;transcript_name=hg002_chrY_paternal_386.1;gene_name=LOC105377218;ID=intron:HG03009_ch_T0000529:0;Name=LOC105377218;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	20238857	20238942	.	+	.	source_transcript=hg002_chrY_paternal_386.1;source_transcript_name=hg002_chrY_paternal_386.1;source_gene=hg002_chrY_paternal_386;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_386;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_386.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_386.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377218;alternative_source_transcripts=hg002_chrY_paternal_386.1;transcript_id=HG03009_ch_T0000529;gene_id=HG03009_ch_G0000186;Parent=HG03009_ch_T0000529;transcript_name=hg002_chrY_paternal_386.1;gene_name=LOC105377218;ID=exon:HG03009_ch_T0000529:1;Name=LOC105377218;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	20238943	20239030	.	+	.	source_transcript=hg002_chrY_paternal_386.1;source_transcript_name=hg002_chrY_paternal_386.1;source_gene=hg002_chrY_paternal_386;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_386;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_386.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_386.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377218;alternative_source_transcripts=hg002_chrY_paternal_386.1;transcript_id=HG03009_ch_T0000529;gene_id=HG03009_ch_G0000186;Parent=HG03009_ch_T0000529;transcript_name=hg002_chrY_paternal_386.1;gene_name=LOC105377218;ID=intron:HG03009_ch_T0000529:1;Name=LOC105377218;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	20239031	20239487	.	+	.	source_transcript=hg002_chrY_paternal_386.1;source_transcript_name=hg002_chrY_paternal_386.1;source_gene=hg002_chrY_paternal_386;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_386;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_386.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_386.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377218;alternative_source_transcripts=hg002_chrY_paternal_386.1;transcript_id=HG03009_ch_T0000529;gene_id=HG03009_ch_G0000186;Parent=HG03009_ch_T0000529;transcript_name=hg002_chrY_paternal_386.1;gene_name=LOC105377218;ID=exon:HG03009_ch_T0000529:2;Name=LOC105377218;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	20348549	20352850	.	+	.	source_gene_common_name=FAM224B;source_gene=hg002_chrY_paternal_389;alternative_source_transcripts=hg002_chrY_paternal_389.1;gene_id=HG03009_ch_G0000187;gene_biotype=lncRNA;gene_name=FAM224B;gene_sources=liftoff;ID=HG03009_ch_G0000187;Name=FAM224B
HG03009_chrY	CAT	transcript	20348549	20352850	1000	+	.	source_transcript=hg002_chrY_paternal_389.1;source_transcript_name=hg002_chrY_paternal_389.1;source_gene=hg002_chrY_paternal_389;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_389;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_389.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_389.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=hg002_chrY_paternal_389.1;transcript_id=HG03009_ch_T0000530;gene_id=HG03009_ch_G0000187;Parent=HG03009_ch_G0000187;transcript_name=hg002_chrY_paternal_389.1;gene_name=FAM224B;ID=HG03009_ch_T0000530;Name=FAM224B
HG03009_chrY	CAT	exon	20348549	20348685	.	+	.	source_transcript=hg002_chrY_paternal_389.1;source_transcript_name=hg002_chrY_paternal_389.1;source_gene=hg002_chrY_paternal_389;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_389;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_389.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_389.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=hg002_chrY_paternal_389.1;transcript_id=HG03009_ch_T0000530;gene_id=HG03009_ch_G0000187;Parent=HG03009_ch_T0000530;transcript_name=hg002_chrY_paternal_389.1;gene_name=FAM224B;ID=exon:HG03009_ch_T0000530:0;Name=FAM224B;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	20348686	20351190	.	+	.	source_transcript=hg002_chrY_paternal_389.1;source_transcript_name=hg002_chrY_paternal_389.1;source_gene=hg002_chrY_paternal_389;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_389;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_389.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_389.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=hg002_chrY_paternal_389.1;transcript_id=HG03009_ch_T0000530;gene_id=HG03009_ch_G0000187;Parent=HG03009_ch_T0000530;transcript_name=hg002_chrY_paternal_389.1;gene_name=FAM224B;ID=intron:HG03009_ch_T0000530:0;Name=FAM224B;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	20351191	20351308	.	+	.	source_transcript=hg002_chrY_paternal_389.1;source_transcript_name=hg002_chrY_paternal_389.1;source_gene=hg002_chrY_paternal_389;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_389;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_389.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_389.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=hg002_chrY_paternal_389.1;transcript_id=HG03009_ch_T0000530;gene_id=HG03009_ch_G0000187;Parent=HG03009_ch_T0000530;transcript_name=hg002_chrY_paternal_389.1;gene_name=FAM224B;ID=exon:HG03009_ch_T0000530:1;Name=FAM224B;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	20351309	20352643	.	+	.	source_transcript=hg002_chrY_paternal_389.1;source_transcript_name=hg002_chrY_paternal_389.1;source_gene=hg002_chrY_paternal_389;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_389;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_389.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_389.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=hg002_chrY_paternal_389.1;transcript_id=HG03009_ch_T0000530;gene_id=HG03009_ch_G0000187;Parent=HG03009_ch_T0000530;transcript_name=hg002_chrY_paternal_389.1;gene_name=FAM224B;ID=intron:HG03009_ch_T0000530:1;Name=FAM224B;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	20352644	20352850	.	+	.	source_transcript=hg002_chrY_paternal_389.1;source_transcript_name=hg002_chrY_paternal_389.1;source_gene=hg002_chrY_paternal_389;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_389;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_389.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_389.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=hg002_chrY_paternal_389.1;transcript_id=HG03009_ch_T0000530;gene_id=HG03009_ch_G0000187;Parent=HG03009_ch_T0000530;transcript_name=hg002_chrY_paternal_389.1;gene_name=FAM224B;ID=exon:HG03009_ch_T0000530:2;Name=FAM224B;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	20364607	20373865	.	+	.	source_gene_common_name=LOC105377217;source_gene=hg002_chrY_paternal_346;gene_id=HG03009_ch_G0000188;gene_biotype=lncRNA;gene_name=LOC105377217;gene_sources=liftoff;ID=HG03009_ch_G0000188;Name=LOC105377217
HG03009_chrY	CAT	transcript	20364607	20373865	1000	+	.	source_transcript=hg002_chrY_paternal_346.1;source_transcript_name=hg002_chrY_paternal_346.1;source_gene=hg002_chrY_paternal_346;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_346;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_346.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_346.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377217;transcript_id=HG03009_ch_T0000531;gene_id=HG03009_ch_G0000188;Parent=HG03009_ch_G0000188;transcript_name=hg002_chrY_paternal_346.1;gene_name=LOC105377217;ID=HG03009_ch_T0000531;Name=LOC105377217
HG03009_chrY	CAT	exon	20364607	20369948	.	+	.	source_transcript=hg002_chrY_paternal_346.1;source_transcript_name=hg002_chrY_paternal_346.1;source_gene=hg002_chrY_paternal_346;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_346;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_346.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377217;transcript_id=HG03009_ch_T0000531;gene_id=HG03009_ch_G0000188;Parent=HG03009_ch_T0000531;transcript_name=hg002_chrY_paternal_346.1;gene_name=LOC105377217;ID=exon:HG03009_ch_T0000531:0;Name=LOC105377217;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	20369949	20371159	.	+	.	source_transcript=hg002_chrY_paternal_346.1;source_transcript_name=hg002_chrY_paternal_346.1;source_gene=hg002_chrY_paternal_346;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_346;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_346.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377217;transcript_id=HG03009_ch_T0000531;gene_id=HG03009_ch_G0000188;Parent=HG03009_ch_T0000531;transcript_name=hg002_chrY_paternal_346.1;gene_name=LOC105377217;ID=intron:HG03009_ch_T0000531:0;Name=LOC105377217;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	20371160	20371288	.	+	.	source_transcript=hg002_chrY_paternal_346.1;source_transcript_name=hg002_chrY_paternal_346.1;source_gene=hg002_chrY_paternal_346;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_346;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_346.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377217;transcript_id=HG03009_ch_T0000531;gene_id=HG03009_ch_G0000188;Parent=HG03009_ch_T0000531;transcript_name=hg002_chrY_paternal_346.1;gene_name=LOC105377217;ID=exon:HG03009_ch_T0000531:1;Name=LOC105377217;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	20371289	20371998	.	+	.	source_transcript=hg002_chrY_paternal_346.1;source_transcript_name=hg002_chrY_paternal_346.1;source_gene=hg002_chrY_paternal_346;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_346;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_346.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377217;transcript_id=HG03009_ch_T0000531;gene_id=HG03009_ch_G0000188;Parent=HG03009_ch_T0000531;transcript_name=hg002_chrY_paternal_346.1;gene_name=LOC105377217;ID=intron:HG03009_ch_T0000531:1;Name=LOC105377217;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	20371999	20373865	.	+	.	source_transcript=hg002_chrY_paternal_346.1;source_transcript_name=hg002_chrY_paternal_346.1;source_gene=hg002_chrY_paternal_346;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_346;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_346.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377217;transcript_id=HG03009_ch_T0000531;gene_id=HG03009_ch_G0000188;Parent=HG03009_ch_T0000531;transcript_name=hg002_chrY_paternal_346.1;gene_name=LOC105377217;ID=exon:HG03009_ch_T0000531:2;Name=LOC105377217;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	20411269	20427049	.	-	.	source_gene_common_name=FAM41AY1;source_gene=hg002_chrY_paternal_394;alternative_source_transcripts=hg002_chrY_paternal_394.1;gene_id=HG03009_ch_G0000189;gene_biotype=lncRNA;gene_name=FAM41AY1;gene_sources=liftoff;ID=HG03009_ch_G0000189;Name=FAM41AY1
HG03009_chrY	CAT	transcript	20411269	20427049	1000	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1;transcript_id=HG03009_ch_T0000532;gene_id=HG03009_ch_G0000189;Parent=HG03009_ch_G0000189;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=HG03009_ch_T0000532;Name=FAM41AY1
HG03009_chrY	CAT	exon	20411269	20411995	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1;transcript_id=HG03009_ch_T0000532;gene_id=HG03009_ch_G0000189;Parent=HG03009_ch_T0000532;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=exon:HG03009_ch_T0000532:0;Name=FAM41AY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	20411996	20412077	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1;transcript_id=HG03009_ch_T0000532;gene_id=HG03009_ch_G0000189;Parent=HG03009_ch_T0000532;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=intron:HG03009_ch_T0000532:0;Name=FAM41AY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	20412078	20412299	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1;transcript_id=HG03009_ch_T0000532;gene_id=HG03009_ch_G0000189;Parent=HG03009_ch_T0000532;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=exon:HG03009_ch_T0000532:1;Name=FAM41AY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	20412300	20412511	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1;transcript_id=HG03009_ch_T0000532;gene_id=HG03009_ch_G0000189;Parent=HG03009_ch_T0000532;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=intron:HG03009_ch_T0000532:1;Name=FAM41AY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	20412512	20412699	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1;transcript_id=HG03009_ch_T0000532;gene_id=HG03009_ch_G0000189;Parent=HG03009_ch_T0000532;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=exon:HG03009_ch_T0000532:2;Name=FAM41AY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	20412700	20412992	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1;transcript_id=HG03009_ch_T0000532;gene_id=HG03009_ch_G0000189;Parent=HG03009_ch_T0000532;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=intron:HG03009_ch_T0000532:2;Name=FAM41AY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	20412993	20413202	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1;transcript_id=HG03009_ch_T0000532;gene_id=HG03009_ch_G0000189;Parent=HG03009_ch_T0000532;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=exon:HG03009_ch_T0000532:3;Name=FAM41AY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	20413203	20413476	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1;transcript_id=HG03009_ch_T0000532;gene_id=HG03009_ch_G0000189;Parent=HG03009_ch_T0000532;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=intron:HG03009_ch_T0000532:3;Name=FAM41AY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	20413477	20413570	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1;transcript_id=HG03009_ch_T0000532;gene_id=HG03009_ch_G0000189;Parent=HG03009_ch_T0000532;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=exon:HG03009_ch_T0000532:4;Name=FAM41AY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	20413571	20413679	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1;transcript_id=HG03009_ch_T0000532;gene_id=HG03009_ch_G0000189;Parent=HG03009_ch_T0000532;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=intron:HG03009_ch_T0000532:4;Name=FAM41AY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	20413680	20413850	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1;transcript_id=HG03009_ch_T0000532;gene_id=HG03009_ch_G0000189;Parent=HG03009_ch_T0000532;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=exon:HG03009_ch_T0000532:5;Name=FAM41AY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	20413851	20414443	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1;transcript_id=HG03009_ch_T0000532;gene_id=HG03009_ch_G0000189;Parent=HG03009_ch_T0000532;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=intron:HG03009_ch_T0000532:5;Name=FAM41AY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	20414444	20414537	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1;transcript_id=HG03009_ch_T0000532;gene_id=HG03009_ch_G0000189;Parent=HG03009_ch_T0000532;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=exon:HG03009_ch_T0000532:6;Name=FAM41AY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	20414538	20414784	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1;transcript_id=HG03009_ch_T0000532;gene_id=HG03009_ch_G0000189;Parent=HG03009_ch_T0000532;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=intron:HG03009_ch_T0000532:6;Name=FAM41AY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	20414785	20414913	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1;transcript_id=HG03009_ch_T0000532;gene_id=HG03009_ch_G0000189;Parent=HG03009_ch_T0000532;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=exon:HG03009_ch_T0000532:7;Name=FAM41AY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	20414914	20426246	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1;transcript_id=HG03009_ch_T0000532;gene_id=HG03009_ch_G0000189;Parent=HG03009_ch_T0000532;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=intron:HG03009_ch_T0000532:7;Name=FAM41AY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	20426247	20426296	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1;transcript_id=HG03009_ch_T0000532;gene_id=HG03009_ch_G0000189;Parent=HG03009_ch_T0000532;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=exon:HG03009_ch_T0000532:8;Name=FAM41AY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	20426297	20426891	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1;transcript_id=HG03009_ch_T0000532;gene_id=HG03009_ch_G0000189;Parent=HG03009_ch_T0000532;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=intron:HG03009_ch_T0000532:8;Name=FAM41AY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	20426892	20427049	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1;transcript_id=HG03009_ch_T0000532;gene_id=HG03009_ch_G0000189;Parent=HG03009_ch_T0000532;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=exon:HG03009_ch_T0000532:9;Name=FAM41AY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	20506000	20539849	.	+	.	source_gene_common_name=LOC124905305;source_gene=hg002_chrY_paternal_418;gene_id=HG03009_ch_G0000190;gene_biotype=lncRNA;gene_name=LOC124905305;gene_sources=liftoff;ID=HG03009_ch_G0000190;Name=LOC124905305
HG03009_chrY	CAT	transcript	20506000	20539849	1000	+	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG03009_ch_T0000533;gene_id=HG03009_ch_G0000190;Parent=HG03009_ch_G0000190;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=HG03009_ch_T0000533;Name=LOC124905305
HG03009_chrY	CAT	exon	20506000	20506078	.	+	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG03009_ch_T0000533;gene_id=HG03009_ch_G0000190;Parent=HG03009_ch_T0000533;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:HG03009_ch_T0000533:0;Name=LOC124905305;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	20506079	20508479	.	+	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG03009_ch_T0000533;gene_id=HG03009_ch_G0000190;Parent=HG03009_ch_T0000533;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=intron:HG03009_ch_T0000533:0;Name=LOC124905305;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	20508480	20508642	.	+	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG03009_ch_T0000533;gene_id=HG03009_ch_G0000190;Parent=HG03009_ch_T0000533;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:HG03009_ch_T0000533:1;Name=LOC124905305;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	20508643	20509295	.	+	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG03009_ch_T0000533;gene_id=HG03009_ch_G0000190;Parent=HG03009_ch_T0000533;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=intron:HG03009_ch_T0000533:1;Name=LOC124905305;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	20509296	20509397	.	+	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG03009_ch_T0000533;gene_id=HG03009_ch_G0000190;Parent=HG03009_ch_T0000533;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:HG03009_ch_T0000533:2;Name=LOC124905305;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	20509398	20511757	.	+	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG03009_ch_T0000533;gene_id=HG03009_ch_G0000190;Parent=HG03009_ch_T0000533;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=intron:HG03009_ch_T0000533:2;Name=LOC124905305;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	20511758	20511961	.	+	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG03009_ch_T0000533;gene_id=HG03009_ch_G0000190;Parent=HG03009_ch_T0000533;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:HG03009_ch_T0000533:3;Name=LOC124905305;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	20511962	20513677	.	+	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG03009_ch_T0000533;gene_id=HG03009_ch_G0000190;Parent=HG03009_ch_T0000533;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=intron:HG03009_ch_T0000533:3;Name=LOC124905305;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	20513678	20513812	.	+	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG03009_ch_T0000533;gene_id=HG03009_ch_G0000190;Parent=HG03009_ch_T0000533;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:HG03009_ch_T0000533:4;Name=LOC124905305;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	20513813	20522605	.	+	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG03009_ch_T0000533;gene_id=HG03009_ch_G0000190;Parent=HG03009_ch_T0000533;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=intron:HG03009_ch_T0000533:4;Name=LOC124905305;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	20522606	20523037	.	+	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG03009_ch_T0000533;gene_id=HG03009_ch_G0000190;Parent=HG03009_ch_T0000533;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:HG03009_ch_T0000533:5;Name=LOC124905305;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	20523038	20537541	.	+	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG03009_ch_T0000533;gene_id=HG03009_ch_G0000190;Parent=HG03009_ch_T0000533;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=intron:HG03009_ch_T0000533:5;Name=LOC124905305;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	20537542	20539849	.	+	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG03009_ch_T0000533;gene_id=HG03009_ch_G0000190;Parent=HG03009_ch_T0000533;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:HG03009_ch_T0000533:6;Name=LOC124905305;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	20506002	20539849	1000	+	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG03009_ch_T0000534;gene_id=HG03009_ch_G0000190;Parent=HG03009_ch_G0000190;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=HG03009_ch_T0000534;Name=LOC124905305
HG03009_chrY	CAT	exon	20506002	20506078	.	+	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG03009_ch_T0000534;gene_id=HG03009_ch_G0000190;Parent=HG03009_ch_T0000534;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:HG03009_ch_T0000534:0;Name=LOC124905305;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	20506079	20508479	.	+	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG03009_ch_T0000534;gene_id=HG03009_ch_G0000190;Parent=HG03009_ch_T0000534;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=intron:HG03009_ch_T0000534:0;Name=LOC124905305;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	20508480	20508642	.	+	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG03009_ch_T0000534;gene_id=HG03009_ch_G0000190;Parent=HG03009_ch_T0000534;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:HG03009_ch_T0000534:1;Name=LOC124905305;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	20508643	20509295	.	+	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG03009_ch_T0000534;gene_id=HG03009_ch_G0000190;Parent=HG03009_ch_T0000534;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=intron:HG03009_ch_T0000534:1;Name=LOC124905305;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	20509296	20509397	.	+	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG03009_ch_T0000534;gene_id=HG03009_ch_G0000190;Parent=HG03009_ch_T0000534;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:HG03009_ch_T0000534:2;Name=LOC124905305;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	20509398	20511757	.	+	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG03009_ch_T0000534;gene_id=HG03009_ch_G0000190;Parent=HG03009_ch_T0000534;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=intron:HG03009_ch_T0000534:2;Name=LOC124905305;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	20511758	20511961	.	+	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG03009_ch_T0000534;gene_id=HG03009_ch_G0000190;Parent=HG03009_ch_T0000534;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:HG03009_ch_T0000534:3;Name=LOC124905305;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	20511962	20513677	.	+	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG03009_ch_T0000534;gene_id=HG03009_ch_G0000190;Parent=HG03009_ch_T0000534;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=intron:HG03009_ch_T0000534:3;Name=LOC124905305;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	20513678	20513812	.	+	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG03009_ch_T0000534;gene_id=HG03009_ch_G0000190;Parent=HG03009_ch_T0000534;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:HG03009_ch_T0000534:4;Name=LOC124905305;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	20513813	20522605	.	+	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG03009_ch_T0000534;gene_id=HG03009_ch_G0000190;Parent=HG03009_ch_T0000534;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=intron:HG03009_ch_T0000534:4;Name=LOC124905305;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	20522606	20523037	.	+	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG03009_ch_T0000534;gene_id=HG03009_ch_G0000190;Parent=HG03009_ch_T0000534;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:HG03009_ch_T0000534:5;Name=LOC124905305;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	20523038	20528648	.	+	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG03009_ch_T0000534;gene_id=HG03009_ch_G0000190;Parent=HG03009_ch_T0000534;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=intron:HG03009_ch_T0000534:5;Name=LOC124905305;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	20528649	20528776	.	+	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG03009_ch_T0000534;gene_id=HG03009_ch_G0000190;Parent=HG03009_ch_T0000534;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:HG03009_ch_T0000534:6;Name=LOC124905305;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	20528777	20537541	.	+	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG03009_ch_T0000534;gene_id=HG03009_ch_G0000190;Parent=HG03009_ch_T0000534;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=intron:HG03009_ch_T0000534:6;Name=LOC124905305;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	20537542	20539849	.	+	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG03009_ch_T0000534;gene_id=HG03009_ch_G0000190;Parent=HG03009_ch_T0000534;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:HG03009_ch_T0000534:7;Name=LOC124905305;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	20508508	20508669	.	+	.	source_gene_common_name=LOC124905307;source_gene=hg002_chrY_paternal_422;gene_id=HG03009_ch_G0000191;gene_biotype=snRNA;gene_name=LOC124905307;gene_sources=liftoff;ID=HG03009_ch_G0000191;Name=LOC124905307
HG03009_chrY	CAT	transcript	20508508	20508669	1000	+	.	source_transcript=hg002_chrY_paternal_422.1;source_transcript_name=hg002_chrY_paternal_422.1;source_gene=hg002_chrY_paternal_422;source_gene_biotype=snRNA;original_gene_id=hg002_chrY_paternal_422;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=hg002_chrY_paternal_422.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_422.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905307;transcript_id=HG03009_ch_T0000535;gene_id=HG03009_ch_G0000191;Parent=HG03009_ch_G0000191;transcript_name=hg002_chrY_paternal_422.1;gene_name=LOC124905307;ID=HG03009_ch_T0000535;Name=LOC124905307
HG03009_chrY	CAT	exon	20508508	20508669	.	+	.	source_transcript=hg002_chrY_paternal_422.1;source_transcript_name=hg002_chrY_paternal_422.1;source_gene=hg002_chrY_paternal_422;source_gene_biotype=snRNA;original_gene_id=hg002_chrY_paternal_422;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=hg002_chrY_paternal_422.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_422.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905307;transcript_id=HG03009_ch_T0000535;gene_id=HG03009_ch_G0000191;Parent=HG03009_ch_T0000535;transcript_name=hg002_chrY_paternal_422.1;gene_name=LOC124905307;ID=exon:HG03009_ch_T0000535:0;Name=LOC124905307;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	20551625	20610940	.	+	.	source_gene_common_name=HSFY1;source_gene=hg002_chrY_paternal_403;alternative_source_transcripts=hg002_chrY_paternal_403.1,hg002_chrY_paternal_403.1;gene_id=HG03009_ch_G0000192;gene_biotype=protein_coding;gene_name=HSFY1;gene_sources=liftoff,augTM;ID=HG03009_ch_G0000192;Name=HSFY1
HG03009_chrY	CAT	transcript	20551625	20570576	100	+	.	source_transcript=hg002_chrY_paternal_403.1;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.1,hg002_chrY_paternal_403.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000536;gene_id=HG03009_ch_G0000192;Parent=HG03009_ch_G0000192;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=HG03009_ch_T0000536;Name=HSFY1
HG03009_chrY	CAT	exon	20551625	20551819	.	+	.	source_transcript=hg002_chrY_paternal_403.1;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.1,hg002_chrY_paternal_403.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000536;gene_id=HG03009_ch_G0000192;Parent=HG03009_ch_T0000536;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=exon:HG03009_ch_T0000536:0;Name=HSFY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	20551794	20551819	.	+	0	source_transcript=hg002_chrY_paternal_403.1;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.1,hg002_chrY_paternal_403.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000536;gene_id=HG03009_ch_G0000192;Parent=HG03009_ch_T0000536;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=CDS:HG03009_ch_T0000536:0;Name=HSFY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	20551794	20551796	.	+	0	source_transcript=hg002_chrY_paternal_403.1;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.1,hg002_chrY_paternal_403.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000536;gene_id=HG03009_ch_G0000192;Parent=HG03009_ch_T0000536;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=start_codon:HG03009_ch_T0000536;Name=HSFY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	20551820	20569016	.	+	.	source_transcript=hg002_chrY_paternal_403.1;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.1,hg002_chrY_paternal_403.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000536;gene_id=HG03009_ch_G0000192;Parent=HG03009_ch_T0000536;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=intron:HG03009_ch_T0000536:0;Name=HSFY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	20569017	20569284	.	+	.	source_transcript=hg002_chrY_paternal_403.1;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.1,hg002_chrY_paternal_403.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000536;gene_id=HG03009_ch_G0000192;Parent=HG03009_ch_T0000536;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=exon:HG03009_ch_T0000536:1;Name=HSFY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	20569017	20569284	.	+	1	source_transcript=hg002_chrY_paternal_403.1;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.1,hg002_chrY_paternal_403.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000536;gene_id=HG03009_ch_G0000192;Parent=HG03009_ch_T0000536;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=CDS:HG03009_ch_T0000536:1;Name=HSFY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	20569285	20569762	.	+	.	source_transcript=hg002_chrY_paternal_403.1;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.1,hg002_chrY_paternal_403.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000536;gene_id=HG03009_ch_G0000192;Parent=HG03009_ch_T0000536;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=intron:HG03009_ch_T0000536:1;Name=HSFY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	20569763	20570576	.	+	.	source_transcript=hg002_chrY_paternal_403.1;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.1,hg002_chrY_paternal_403.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000536;gene_id=HG03009_ch_G0000192;Parent=HG03009_ch_T0000536;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=exon:HG03009_ch_T0000536:2;Name=HSFY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	20569763	20570455	.	+	0	source_transcript=hg002_chrY_paternal_403.1;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.1,hg002_chrY_paternal_403.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000536;gene_id=HG03009_ch_G0000192;Parent=HG03009_ch_T0000536;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=CDS:HG03009_ch_T0000536:2;Name=HSFY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	20570453	20570455	.	+	0	source_transcript=hg002_chrY_paternal_403.1;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.1,hg002_chrY_paternal_403.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000536;gene_id=HG03009_ch_G0000192;Parent=HG03009_ch_T0000536;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=stop_codon:HG03009_ch_T0000536;Name=HSFY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	20568665	20570576	100	+	.	source_transcript=hg002_chrY_paternal_403.2;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.2,hg002_chrY_paternal_403.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000537;gene_id=HG03009_ch_G0000192;Parent=HG03009_ch_G0000192;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=HG03009_ch_T0000537;Name=HSFY1
HG03009_chrY	CAT	exon	20568665	20568918	.	+	.	source_transcript=hg002_chrY_paternal_403.2;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.2,hg002_chrY_paternal_403.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000537;gene_id=HG03009_ch_G0000192;Parent=HG03009_ch_T0000537;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=exon:HG03009_ch_T0000537:0;Name=HSFY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	20568908	20568918	.	+	0	source_transcript=hg002_chrY_paternal_403.2;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.2,hg002_chrY_paternal_403.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000537;gene_id=HG03009_ch_G0000192;Parent=HG03009_ch_T0000537;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=CDS:HG03009_ch_T0000537:0;Name=HSFY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	20568908	20568910	.	+	0	source_transcript=hg002_chrY_paternal_403.2;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.2,hg002_chrY_paternal_403.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000537;gene_id=HG03009_ch_G0000192;Parent=HG03009_ch_T0000537;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=start_codon:HG03009_ch_T0000537;Name=HSFY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	20568919	20569016	.	+	.	source_transcript=hg002_chrY_paternal_403.2;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.2,hg002_chrY_paternal_403.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000537;gene_id=HG03009_ch_G0000192;Parent=HG03009_ch_T0000537;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=intron:HG03009_ch_T0000537:0;Name=HSFY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	20569017	20569284	.	+	.	source_transcript=hg002_chrY_paternal_403.2;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.2,hg002_chrY_paternal_403.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000537;gene_id=HG03009_ch_G0000192;Parent=HG03009_ch_T0000537;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=exon:HG03009_ch_T0000537:1;Name=HSFY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	20569017	20569284	.	+	1	source_transcript=hg002_chrY_paternal_403.2;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.2,hg002_chrY_paternal_403.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000537;gene_id=HG03009_ch_G0000192;Parent=HG03009_ch_T0000537;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=CDS:HG03009_ch_T0000537:1;Name=HSFY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	20569285	20569762	.	+	.	source_transcript=hg002_chrY_paternal_403.2;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.2,hg002_chrY_paternal_403.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000537;gene_id=HG03009_ch_G0000192;Parent=HG03009_ch_T0000537;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=intron:HG03009_ch_T0000537:1;Name=HSFY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	20569763	20570576	.	+	.	source_transcript=hg002_chrY_paternal_403.2;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.2,hg002_chrY_paternal_403.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000537;gene_id=HG03009_ch_G0000192;Parent=HG03009_ch_T0000537;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=exon:HG03009_ch_T0000537:2;Name=HSFY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	20569763	20570455	.	+	0	source_transcript=hg002_chrY_paternal_403.2;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.2,hg002_chrY_paternal_403.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000537;gene_id=HG03009_ch_G0000192;Parent=HG03009_ch_T0000537;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=CDS:HG03009_ch_T0000537:2;Name=HSFY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	20570453	20570455	.	+	0	source_transcript=hg002_chrY_paternal_403.2;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.2,hg002_chrY_paternal_403.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000537;gene_id=HG03009_ch_G0000192;Parent=HG03009_ch_T0000537;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=stop_codon:HG03009_ch_T0000537;Name=HSFY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	20568675	20610940	100	+	.	source_transcript=hg002_chrY_paternal_403.4;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.4,hg002_chrY_paternal_403.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000538;gene_id=HG03009_ch_G0000192;Parent=HG03009_ch_G0000192;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=HG03009_ch_T0000538;Name=HSFY1
HG03009_chrY	CAT	exon	20568675	20569284	.	+	.	source_transcript=hg002_chrY_paternal_403.4;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.4,hg002_chrY_paternal_403.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000538;gene_id=HG03009_ch_G0000192;Parent=HG03009_ch_T0000538;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=exon:HG03009_ch_T0000538:0;Name=HSFY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	20568772	20569284	.	+	0	source_transcript=hg002_chrY_paternal_403.4;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.4,hg002_chrY_paternal_403.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000538;gene_id=HG03009_ch_G0000192;Parent=HG03009_ch_T0000538;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=CDS:HG03009_ch_T0000538:0;Name=HSFY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	20568772	20568774	.	+	0	source_transcript=hg002_chrY_paternal_403.4;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.4,hg002_chrY_paternal_403.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000538;gene_id=HG03009_ch_G0000192;Parent=HG03009_ch_T0000538;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=start_codon:HG03009_ch_T0000538;Name=HSFY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	20569285	20610512	.	+	.	source_transcript=hg002_chrY_paternal_403.4;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.4,hg002_chrY_paternal_403.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000538;gene_id=HG03009_ch_G0000192;Parent=HG03009_ch_T0000538;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=intron:HG03009_ch_T0000538:0;Name=HSFY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	20610513	20610940	.	+	.	source_transcript=hg002_chrY_paternal_403.4;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.4,hg002_chrY_paternal_403.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000538;gene_id=HG03009_ch_G0000192;Parent=HG03009_ch_T0000538;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=exon:HG03009_ch_T0000538:1;Name=HSFY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	20610513	20610611	.	+	0	source_transcript=hg002_chrY_paternal_403.4;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.4,hg002_chrY_paternal_403.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000538;gene_id=HG03009_ch_G0000192;Parent=HG03009_ch_T0000538;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=CDS:HG03009_ch_T0000538:1;Name=HSFY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	20610609	20610611	.	+	0	source_transcript=hg002_chrY_paternal_403.4;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.4,hg002_chrY_paternal_403.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000538;gene_id=HG03009_ch_G0000192;Parent=HG03009_ch_T0000538;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=stop_codon:HG03009_ch_T0000538;Name=HSFY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	20568675	20574054	1000	+	.	source_transcript=hg002_chrY_paternal_403.3;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.3,hg002_chrY_paternal_403.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000539;gene_id=HG03009_ch_G0000192;Parent=HG03009_ch_G0000192;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=HG03009_ch_T0000539;Name=HSFY1
HG03009_chrY	CAT	exon	20568675	20569284	.	+	.	source_transcript=hg002_chrY_paternal_403.3;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.3,hg002_chrY_paternal_403.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000539;gene_id=HG03009_ch_G0000192;Parent=HG03009_ch_T0000539;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=exon:HG03009_ch_T0000539:0;Name=HSFY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	20569285	20572097	.	+	.	source_transcript=hg002_chrY_paternal_403.3;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.3,hg002_chrY_paternal_403.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000539;gene_id=HG03009_ch_G0000192;Parent=HG03009_ch_T0000539;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=intron:HG03009_ch_T0000539:0;Name=HSFY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	20572098	20572207	.	+	.	source_transcript=hg002_chrY_paternal_403.3;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.3,hg002_chrY_paternal_403.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000539;gene_id=HG03009_ch_G0000192;Parent=HG03009_ch_T0000539;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=exon:HG03009_ch_T0000539:1;Name=HSFY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	20572208	20572764	.	+	.	source_transcript=hg002_chrY_paternal_403.3;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.3,hg002_chrY_paternal_403.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000539;gene_id=HG03009_ch_G0000192;Parent=HG03009_ch_T0000539;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=intron:HG03009_ch_T0000539:1;Name=HSFY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	20572765	20572851	.	+	.	source_transcript=hg002_chrY_paternal_403.3;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.3,hg002_chrY_paternal_403.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000539;gene_id=HG03009_ch_G0000192;Parent=HG03009_ch_T0000539;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=exon:HG03009_ch_T0000539:2;Name=HSFY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	20572852	20573898	.	+	.	source_transcript=hg002_chrY_paternal_403.3;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.3,hg002_chrY_paternal_403.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000539;gene_id=HG03009_ch_G0000192;Parent=HG03009_ch_T0000539;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=intron:HG03009_ch_T0000539:2;Name=HSFY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	20573899	20574054	.	+	.	source_transcript=hg002_chrY_paternal_403.3;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.3,hg002_chrY_paternal_403.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000539;gene_id=HG03009_ch_G0000192;Parent=HG03009_ch_T0000539;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=exon:HG03009_ch_T0000539:3;Name=HSFY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	20568675	20610940	1000	+	.	source_transcript=hg002_chrY_paternal_403.5;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.5,hg002_chrY_paternal_403.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000540;gene_id=HG03009_ch_G0000192;Parent=HG03009_ch_G0000192;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=HG03009_ch_T0000540;Name=HSFY1
HG03009_chrY	CAT	exon	20568675	20569284	.	+	.	source_transcript=hg002_chrY_paternal_403.5;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.5,hg002_chrY_paternal_403.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000540;gene_id=HG03009_ch_G0000192;Parent=HG03009_ch_T0000540;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=exon:HG03009_ch_T0000540:0;Name=HSFY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	20569285	20572097	.	+	.	source_transcript=hg002_chrY_paternal_403.5;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.5,hg002_chrY_paternal_403.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000540;gene_id=HG03009_ch_G0000192;Parent=HG03009_ch_T0000540;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=intron:HG03009_ch_T0000540:0;Name=HSFY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	20572098	20572207	.	+	.	source_transcript=hg002_chrY_paternal_403.5;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.5,hg002_chrY_paternal_403.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000540;gene_id=HG03009_ch_G0000192;Parent=HG03009_ch_T0000540;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=exon:HG03009_ch_T0000540:1;Name=HSFY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	20572208	20572764	.	+	.	source_transcript=hg002_chrY_paternal_403.5;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.5,hg002_chrY_paternal_403.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000540;gene_id=HG03009_ch_G0000192;Parent=HG03009_ch_T0000540;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=intron:HG03009_ch_T0000540:1;Name=HSFY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	20572765	20572851	.	+	.	source_transcript=hg002_chrY_paternal_403.5;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.5,hg002_chrY_paternal_403.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000540;gene_id=HG03009_ch_G0000192;Parent=HG03009_ch_T0000540;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=exon:HG03009_ch_T0000540:2;Name=HSFY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	20572852	20573898	.	+	.	source_transcript=hg002_chrY_paternal_403.5;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.5,hg002_chrY_paternal_403.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000540;gene_id=HG03009_ch_G0000192;Parent=HG03009_ch_T0000540;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=intron:HG03009_ch_T0000540:2;Name=HSFY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	20573899	20574053	.	+	.	source_transcript=hg002_chrY_paternal_403.5;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.5,hg002_chrY_paternal_403.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000540;gene_id=HG03009_ch_G0000192;Parent=HG03009_ch_T0000540;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=exon:HG03009_ch_T0000540:3;Name=HSFY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	20574054	20604649	.	+	.	source_transcript=hg002_chrY_paternal_403.5;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.5,hg002_chrY_paternal_403.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000540;gene_id=HG03009_ch_G0000192;Parent=HG03009_ch_T0000540;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=intron:HG03009_ch_T0000540:3;Name=HSFY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	20604650	20604735	.	+	.	source_transcript=hg002_chrY_paternal_403.5;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.5,hg002_chrY_paternal_403.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000540;gene_id=HG03009_ch_G0000192;Parent=HG03009_ch_T0000540;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=exon:HG03009_ch_T0000540:4;Name=HSFY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	20604736	20610512	.	+	.	source_transcript=hg002_chrY_paternal_403.5;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.5,hg002_chrY_paternal_403.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000540;gene_id=HG03009_ch_G0000192;Parent=HG03009_ch_T0000540;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=intron:HG03009_ch_T0000540:4;Name=HSFY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	20610513	20610940	.	+	.	source_transcript=hg002_chrY_paternal_403.5;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.5,hg002_chrY_paternal_403.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000540;gene_id=HG03009_ch_G0000192;Parent=HG03009_ch_T0000540;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=exon:HG03009_ch_T0000540:5;Name=HSFY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	20568704	20570576	100	+	.	source_transcript=hg002_chrY_paternal_403.6;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.6,hg002_chrY_paternal_403.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000541;gene_id=HG03009_ch_G0000192;Parent=HG03009_ch_G0000192;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=HG03009_ch_T0000541;Name=HSFY1
HG03009_chrY	CAT	exon	20568704	20569284	.	+	.	source_transcript=hg002_chrY_paternal_403.6;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.6,hg002_chrY_paternal_403.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000541;gene_id=HG03009_ch_G0000192;Parent=HG03009_ch_T0000541;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=exon:HG03009_ch_T0000541:0;Name=HSFY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	20568772	20569284	.	+	0	source_transcript=hg002_chrY_paternal_403.6;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.6,hg002_chrY_paternal_403.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000541;gene_id=HG03009_ch_G0000192;Parent=HG03009_ch_T0000541;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=CDS:HG03009_ch_T0000541:0;Name=HSFY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	20568772	20568774	.	+	0	source_transcript=hg002_chrY_paternal_403.6;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.6,hg002_chrY_paternal_403.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000541;gene_id=HG03009_ch_G0000192;Parent=HG03009_ch_T0000541;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=start_codon:HG03009_ch_T0000541;Name=HSFY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	20569285	20569762	.	+	.	source_transcript=hg002_chrY_paternal_403.6;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.6,hg002_chrY_paternal_403.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000541;gene_id=HG03009_ch_G0000192;Parent=HG03009_ch_T0000541;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=intron:HG03009_ch_T0000541:0;Name=HSFY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	20569763	20570576	.	+	.	source_transcript=hg002_chrY_paternal_403.6;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.6,hg002_chrY_paternal_403.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000541;gene_id=HG03009_ch_G0000192;Parent=HG03009_ch_T0000541;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=exon:HG03009_ch_T0000541:1;Name=HSFY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	20569763	20570455	.	+	0	source_transcript=hg002_chrY_paternal_403.6;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.6,hg002_chrY_paternal_403.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000541;gene_id=HG03009_ch_G0000192;Parent=HG03009_ch_T0000541;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=CDS:HG03009_ch_T0000541:1;Name=HSFY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	20570453	20570455	.	+	0	source_transcript=hg002_chrY_paternal_403.6;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.6,hg002_chrY_paternal_403.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000541;gene_id=HG03009_ch_G0000192;Parent=HG03009_ch_T0000541;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=stop_codon:HG03009_ch_T0000541;Name=HSFY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	20603183	20612498	.	-	.	source_gene_common_name=TTTY9B;source_gene=hg002_chrY_paternal_407;alternative_source_transcripts=hg002_chrY_paternal_407.1,hg002_chrY_paternal_407.1;gene_id=HG03009_ch_G0000193;gene_biotype=lncRNA;gene_name=TTTY9B;gene_sources=liftoff;ID=HG03009_ch_G0000193;Name=TTTY9B
HG03009_chrY	CAT	transcript	20603183	20612498	1000	-	.	source_transcript=hg002_chrY_paternal_407.1;source_transcript_name=hg002_chrY_paternal_407.1;source_gene=hg002_chrY_paternal_407;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_407;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_407.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_407.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;alternative_source_transcripts=hg002_chrY_paternal_407.1,hg002_chrY_paternal_407.1;transcript_id=HG03009_ch_T0000542;gene_id=HG03009_ch_G0000193;Parent=HG03009_ch_G0000193;transcript_name=hg002_chrY_paternal_407.1;gene_name=TTTY9B;ID=HG03009_ch_T0000542;Name=TTTY9B
HG03009_chrY	CAT	exon	20603183	20604325	.	-	.	source_transcript=hg002_chrY_paternal_407.1;source_transcript_name=hg002_chrY_paternal_407.1;source_gene=hg002_chrY_paternal_407;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_407;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_407.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_407.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;alternative_source_transcripts=hg002_chrY_paternal_407.1,hg002_chrY_paternal_407.1;transcript_id=HG03009_ch_T0000542;gene_id=HG03009_ch_G0000193;Parent=HG03009_ch_T0000542;transcript_name=hg002_chrY_paternal_407.1;gene_name=TTTY9B;ID=exon:HG03009_ch_T0000542:0;Name=TTTY9B;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	20604326	20609388	.	-	.	source_transcript=hg002_chrY_paternal_407.1;source_transcript_name=hg002_chrY_paternal_407.1;source_gene=hg002_chrY_paternal_407;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_407;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_407.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_407.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;alternative_source_transcripts=hg002_chrY_paternal_407.1,hg002_chrY_paternal_407.1;transcript_id=HG03009_ch_T0000542;gene_id=HG03009_ch_G0000193;Parent=HG03009_ch_T0000542;transcript_name=hg002_chrY_paternal_407.1;gene_name=TTTY9B;ID=intron:HG03009_ch_T0000542:0;Name=TTTY9B;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	20609389	20609525	.	-	.	source_transcript=hg002_chrY_paternal_407.1;source_transcript_name=hg002_chrY_paternal_407.1;source_gene=hg002_chrY_paternal_407;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_407;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_407.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_407.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;alternative_source_transcripts=hg002_chrY_paternal_407.1,hg002_chrY_paternal_407.1;transcript_id=HG03009_ch_T0000542;gene_id=HG03009_ch_G0000193;Parent=HG03009_ch_T0000542;transcript_name=hg002_chrY_paternal_407.1;gene_name=TTTY9B;ID=exon:HG03009_ch_T0000542:1;Name=TTTY9B;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	20609526	20610107	.	-	.	source_transcript=hg002_chrY_paternal_407.1;source_transcript_name=hg002_chrY_paternal_407.1;source_gene=hg002_chrY_paternal_407;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_407;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_407.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_407.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;alternative_source_transcripts=hg002_chrY_paternal_407.1,hg002_chrY_paternal_407.1;transcript_id=HG03009_ch_T0000542;gene_id=HG03009_ch_G0000193;Parent=HG03009_ch_T0000542;transcript_name=hg002_chrY_paternal_407.1;gene_name=TTTY9B;ID=intron:HG03009_ch_T0000542:1;Name=TTTY9B;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	20610108	20610221	.	-	.	source_transcript=hg002_chrY_paternal_407.1;source_transcript_name=hg002_chrY_paternal_407.1;source_gene=hg002_chrY_paternal_407;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_407;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_407.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_407.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;alternative_source_transcripts=hg002_chrY_paternal_407.1,hg002_chrY_paternal_407.1;transcript_id=HG03009_ch_T0000542;gene_id=HG03009_ch_G0000193;Parent=HG03009_ch_T0000542;transcript_name=hg002_chrY_paternal_407.1;gene_name=TTTY9B;ID=exon:HG03009_ch_T0000542:2;Name=TTTY9B;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	20610222	20610582	.	-	.	source_transcript=hg002_chrY_paternal_407.1;source_transcript_name=hg002_chrY_paternal_407.1;source_gene=hg002_chrY_paternal_407;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_407;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_407.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_407.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;alternative_source_transcripts=hg002_chrY_paternal_407.1,hg002_chrY_paternal_407.1;transcript_id=HG03009_ch_T0000542;gene_id=HG03009_ch_G0000193;Parent=HG03009_ch_T0000542;transcript_name=hg002_chrY_paternal_407.1;gene_name=TTTY9B;ID=intron:HG03009_ch_T0000542:2;Name=TTTY9B;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	20610583	20610683	.	-	.	source_transcript=hg002_chrY_paternal_407.1;source_transcript_name=hg002_chrY_paternal_407.1;source_gene=hg002_chrY_paternal_407;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_407;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_407.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_407.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;alternative_source_transcripts=hg002_chrY_paternal_407.1,hg002_chrY_paternal_407.1;transcript_id=HG03009_ch_T0000542;gene_id=HG03009_ch_G0000193;Parent=HG03009_ch_T0000542;transcript_name=hg002_chrY_paternal_407.1;gene_name=TTTY9B;ID=exon:HG03009_ch_T0000542:3;Name=TTTY9B;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	20610684	20612356	.	-	.	source_transcript=hg002_chrY_paternal_407.1;source_transcript_name=hg002_chrY_paternal_407.1;source_gene=hg002_chrY_paternal_407;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_407;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_407.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_407.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;alternative_source_transcripts=hg002_chrY_paternal_407.1,hg002_chrY_paternal_407.1;transcript_id=HG03009_ch_T0000542;gene_id=HG03009_ch_G0000193;Parent=HG03009_ch_T0000542;transcript_name=hg002_chrY_paternal_407.1;gene_name=TTTY9B;ID=intron:HG03009_ch_T0000542:3;Name=TTTY9B;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	20612357	20612498	.	-	.	source_transcript=hg002_chrY_paternal_407.1;source_transcript_name=hg002_chrY_paternal_407.1;source_gene=hg002_chrY_paternal_407;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_407;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_407.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_407.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;alternative_source_transcripts=hg002_chrY_paternal_407.1,hg002_chrY_paternal_407.1;transcript_id=HG03009_ch_T0000542;gene_id=HG03009_ch_G0000193;Parent=HG03009_ch_T0000542;transcript_name=hg002_chrY_paternal_407.1;gene_name=TTTY9B;ID=exon:HG03009_ch_T0000542:4;Name=TTTY9B;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	20751881	20761196	.	+	.	source_gene_common_name=TTTY9A;source_gene=hg002_chrY_paternal_412;alternative_source_transcripts=hg002_chrY_paternal_412.1,hg002_chrY_paternal_412.1;gene_id=HG03009_ch_G0000194;gene_biotype=lncRNA;gene_name=TTTY9A;gene_sources=liftoff;ID=HG03009_ch_G0000194;Name=TTTY9A
HG03009_chrY	CAT	transcript	20751881	20761196	1000	+	.	source_transcript=hg002_chrY_paternal_412.1;source_transcript_name=hg002_chrY_paternal_412.1;source_gene=hg002_chrY_paternal_412;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_412;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_412.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_412.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;alternative_source_transcripts=hg002_chrY_paternal_412.1,hg002_chrY_paternal_412.1;transcript_id=HG03009_ch_T0000543;gene_id=HG03009_ch_G0000194;Parent=HG03009_ch_G0000194;transcript_name=hg002_chrY_paternal_412.1;gene_name=TTTY9A;ID=HG03009_ch_T0000543;Name=TTTY9A
HG03009_chrY	CAT	exon	20751881	20752022	.	+	.	source_transcript=hg002_chrY_paternal_412.1;source_transcript_name=hg002_chrY_paternal_412.1;source_gene=hg002_chrY_paternal_412;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_412;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_412.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_412.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;alternative_source_transcripts=hg002_chrY_paternal_412.1,hg002_chrY_paternal_412.1;transcript_id=HG03009_ch_T0000543;gene_id=HG03009_ch_G0000194;Parent=HG03009_ch_T0000543;transcript_name=hg002_chrY_paternal_412.1;gene_name=TTTY9A;ID=exon:HG03009_ch_T0000543:0;Name=TTTY9A;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	20752023	20753695	.	+	.	source_transcript=hg002_chrY_paternal_412.1;source_transcript_name=hg002_chrY_paternal_412.1;source_gene=hg002_chrY_paternal_412;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_412;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_412.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_412.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;alternative_source_transcripts=hg002_chrY_paternal_412.1,hg002_chrY_paternal_412.1;transcript_id=HG03009_ch_T0000543;gene_id=HG03009_ch_G0000194;Parent=HG03009_ch_T0000543;transcript_name=hg002_chrY_paternal_412.1;gene_name=TTTY9A;ID=intron:HG03009_ch_T0000543:0;Name=TTTY9A;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	20753696	20753796	.	+	.	source_transcript=hg002_chrY_paternal_412.1;source_transcript_name=hg002_chrY_paternal_412.1;source_gene=hg002_chrY_paternal_412;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_412;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_412.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_412.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;alternative_source_transcripts=hg002_chrY_paternal_412.1,hg002_chrY_paternal_412.1;transcript_id=HG03009_ch_T0000543;gene_id=HG03009_ch_G0000194;Parent=HG03009_ch_T0000543;transcript_name=hg002_chrY_paternal_412.1;gene_name=TTTY9A;ID=exon:HG03009_ch_T0000543:1;Name=TTTY9A;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	20753797	20754157	.	+	.	source_transcript=hg002_chrY_paternal_412.1;source_transcript_name=hg002_chrY_paternal_412.1;source_gene=hg002_chrY_paternal_412;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_412;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_412.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_412.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;alternative_source_transcripts=hg002_chrY_paternal_412.1,hg002_chrY_paternal_412.1;transcript_id=HG03009_ch_T0000543;gene_id=HG03009_ch_G0000194;Parent=HG03009_ch_T0000543;transcript_name=hg002_chrY_paternal_412.1;gene_name=TTTY9A;ID=intron:HG03009_ch_T0000543:1;Name=TTTY9A;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	20754158	20754271	.	+	.	source_transcript=hg002_chrY_paternal_412.1;source_transcript_name=hg002_chrY_paternal_412.1;source_gene=hg002_chrY_paternal_412;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_412;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_412.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_412.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;alternative_source_transcripts=hg002_chrY_paternal_412.1,hg002_chrY_paternal_412.1;transcript_id=HG03009_ch_T0000543;gene_id=HG03009_ch_G0000194;Parent=HG03009_ch_T0000543;transcript_name=hg002_chrY_paternal_412.1;gene_name=TTTY9A;ID=exon:HG03009_ch_T0000543:2;Name=TTTY9A;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	20754272	20754853	.	+	.	source_transcript=hg002_chrY_paternal_412.1;source_transcript_name=hg002_chrY_paternal_412.1;source_gene=hg002_chrY_paternal_412;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_412;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_412.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_412.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;alternative_source_transcripts=hg002_chrY_paternal_412.1,hg002_chrY_paternal_412.1;transcript_id=HG03009_ch_T0000543;gene_id=HG03009_ch_G0000194;Parent=HG03009_ch_T0000543;transcript_name=hg002_chrY_paternal_412.1;gene_name=TTTY9A;ID=intron:HG03009_ch_T0000543:2;Name=TTTY9A;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	20754854	20754990	.	+	.	source_transcript=hg002_chrY_paternal_412.1;source_transcript_name=hg002_chrY_paternal_412.1;source_gene=hg002_chrY_paternal_412;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_412;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_412.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_412.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;alternative_source_transcripts=hg002_chrY_paternal_412.1,hg002_chrY_paternal_412.1;transcript_id=HG03009_ch_T0000543;gene_id=HG03009_ch_G0000194;Parent=HG03009_ch_T0000543;transcript_name=hg002_chrY_paternal_412.1;gene_name=TTTY9A;ID=exon:HG03009_ch_T0000543:3;Name=TTTY9A;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	20754991	20760053	.	+	.	source_transcript=hg002_chrY_paternal_412.1;source_transcript_name=hg002_chrY_paternal_412.1;source_gene=hg002_chrY_paternal_412;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_412;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_412.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_412.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;alternative_source_transcripts=hg002_chrY_paternal_412.1,hg002_chrY_paternal_412.1;transcript_id=HG03009_ch_T0000543;gene_id=HG03009_ch_G0000194;Parent=HG03009_ch_T0000543;transcript_name=hg002_chrY_paternal_412.1;gene_name=TTTY9A;ID=intron:HG03009_ch_T0000543:3;Name=TTTY9A;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	20760054	20761196	.	+	.	source_transcript=hg002_chrY_paternal_412.1;source_transcript_name=hg002_chrY_paternal_412.1;source_gene=hg002_chrY_paternal_412;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_412;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_412.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_412.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;alternative_source_transcripts=hg002_chrY_paternal_412.1,hg002_chrY_paternal_412.1;transcript_id=HG03009_ch_T0000543;gene_id=HG03009_ch_G0000194;Parent=HG03009_ch_T0000543;transcript_name=hg002_chrY_paternal_412.1;gene_name=TTTY9A;ID=exon:HG03009_ch_T0000543:4;Name=TTTY9A;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	20753439	20812780	.	-	.	source_gene_common_name=HSFY2;source_gene=hg002_chrY_paternal_413;alternative_source_transcripts=hg002_chrY_paternal_413.1,hg002_chrY_paternal_413.1;gene_id=HG03009_ch_G0000195;gene_biotype=protein_coding;gene_name=HSFY2;gene_sources=liftoff,augTM;ID=HG03009_ch_G0000195;Name=HSFY2
HG03009_chrY	CAT	transcript	20753439	20795751	100	-	.	source_transcript=hg002_chrY_paternal_413.1;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.1,hg002_chrY_paternal_413.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000544;gene_id=HG03009_ch_G0000195;Parent=HG03009_ch_G0000195;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=HG03009_ch_T0000544;Name=HSFY2
HG03009_chrY	CAT	exon	20753439	20753866	.	-	.	source_transcript=hg002_chrY_paternal_413.1;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.1,hg002_chrY_paternal_413.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000544;gene_id=HG03009_ch_G0000195;Parent=HG03009_ch_T0000544;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=exon:HG03009_ch_T0000544:0;Name=HSFY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	20753768	20753866	.	-	0	source_transcript=hg002_chrY_paternal_413.1;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.1,hg002_chrY_paternal_413.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000544;gene_id=HG03009_ch_G0000195;Parent=HG03009_ch_T0000544;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=CDS:HG03009_ch_T0000544:0;Name=HSFY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	20753768	20753770	.	-	0	source_transcript=hg002_chrY_paternal_413.1;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.1,hg002_chrY_paternal_413.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000544;gene_id=HG03009_ch_G0000195;Parent=HG03009_ch_T0000544;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=stop_codon:HG03009_ch_T0000544;Name=HSFY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	20753867	20795121	.	-	.	source_transcript=hg002_chrY_paternal_413.1;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.1,hg002_chrY_paternal_413.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000544;gene_id=HG03009_ch_G0000195;Parent=HG03009_ch_T0000544;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=intron:HG03009_ch_T0000544:0;Name=HSFY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	20795122	20795751	.	-	.	source_transcript=hg002_chrY_paternal_413.1;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.1,hg002_chrY_paternal_413.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000544;gene_id=HG03009_ch_G0000195;Parent=HG03009_ch_T0000544;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=exon:HG03009_ch_T0000544:1;Name=HSFY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	20795122	20795634	.	-	0	source_transcript=hg002_chrY_paternal_413.1;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.1,hg002_chrY_paternal_413.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000544;gene_id=HG03009_ch_G0000195;Parent=HG03009_ch_T0000544;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=CDS:HG03009_ch_T0000544:1;Name=HSFY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	20795632	20795634	.	-	0	source_transcript=hg002_chrY_paternal_413.1;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.1,hg002_chrY_paternal_413.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000544;gene_id=HG03009_ch_G0000195;Parent=HG03009_ch_T0000544;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=start_codon:HG03009_ch_T0000544;Name=HSFY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	20753439	20795751	1000	-	.	source_transcript=hg002_chrY_paternal_413.2;source_transcript_name=hg002_chrY_paternal_413.1;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.2,hg002_chrY_paternal_413.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000545;gene_id=HG03009_ch_G0000195;Parent=HG03009_ch_G0000195;transcript_name=hg002_chrY_paternal_413.1;gene_name=HSFY2;ID=HG03009_ch_T0000545;Name=HSFY2
HG03009_chrY	CAT	exon	20753439	20753866	.	-	.	source_transcript=hg002_chrY_paternal_413.2;source_transcript_name=hg002_chrY_paternal_413.1;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.2,hg002_chrY_paternal_413.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000545;gene_id=HG03009_ch_G0000195;Parent=HG03009_ch_T0000545;transcript_name=hg002_chrY_paternal_413.1;gene_name=HSFY2;ID=exon:HG03009_ch_T0000545:0;Name=HSFY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	20753867	20759643	.	-	.	source_transcript=hg002_chrY_paternal_413.2;source_transcript_name=hg002_chrY_paternal_413.1;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.2,hg002_chrY_paternal_413.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000545;gene_id=HG03009_ch_G0000195;Parent=HG03009_ch_T0000545;transcript_name=hg002_chrY_paternal_413.1;gene_name=HSFY2;ID=intron:HG03009_ch_T0000545:0;Name=HSFY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	20759644	20759729	.	-	.	source_transcript=hg002_chrY_paternal_413.2;source_transcript_name=hg002_chrY_paternal_413.1;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.2,hg002_chrY_paternal_413.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000545;gene_id=HG03009_ch_G0000195;Parent=HG03009_ch_T0000545;transcript_name=hg002_chrY_paternal_413.1;gene_name=HSFY2;ID=exon:HG03009_ch_T0000545:1;Name=HSFY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	20759730	20790346	.	-	.	source_transcript=hg002_chrY_paternal_413.2;source_transcript_name=hg002_chrY_paternal_413.1;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.2,hg002_chrY_paternal_413.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000545;gene_id=HG03009_ch_G0000195;Parent=HG03009_ch_T0000545;transcript_name=hg002_chrY_paternal_413.1;gene_name=HSFY2;ID=intron:HG03009_ch_T0000545:1;Name=HSFY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	20790347	20790501	.	-	.	source_transcript=hg002_chrY_paternal_413.2;source_transcript_name=hg002_chrY_paternal_413.1;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.2,hg002_chrY_paternal_413.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000545;gene_id=HG03009_ch_G0000195;Parent=HG03009_ch_T0000545;transcript_name=hg002_chrY_paternal_413.1;gene_name=HSFY2;ID=exon:HG03009_ch_T0000545:2;Name=HSFY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	20790502	20791548	.	-	.	source_transcript=hg002_chrY_paternal_413.2;source_transcript_name=hg002_chrY_paternal_413.1;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.2,hg002_chrY_paternal_413.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000545;gene_id=HG03009_ch_G0000195;Parent=HG03009_ch_T0000545;transcript_name=hg002_chrY_paternal_413.1;gene_name=HSFY2;ID=intron:HG03009_ch_T0000545:2;Name=HSFY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	20791549	20791635	.	-	.	source_transcript=hg002_chrY_paternal_413.2;source_transcript_name=hg002_chrY_paternal_413.1;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.2,hg002_chrY_paternal_413.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000545;gene_id=HG03009_ch_G0000195;Parent=HG03009_ch_T0000545;transcript_name=hg002_chrY_paternal_413.1;gene_name=HSFY2;ID=exon:HG03009_ch_T0000545:3;Name=HSFY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	20791636	20792198	.	-	.	source_transcript=hg002_chrY_paternal_413.2;source_transcript_name=hg002_chrY_paternal_413.1;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.2,hg002_chrY_paternal_413.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000545;gene_id=HG03009_ch_G0000195;Parent=HG03009_ch_T0000545;transcript_name=hg002_chrY_paternal_413.1;gene_name=HSFY2;ID=intron:HG03009_ch_T0000545:3;Name=HSFY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	20792199	20792308	.	-	.	source_transcript=hg002_chrY_paternal_413.2;source_transcript_name=hg002_chrY_paternal_413.1;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.2,hg002_chrY_paternal_413.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000545;gene_id=HG03009_ch_G0000195;Parent=HG03009_ch_T0000545;transcript_name=hg002_chrY_paternal_413.1;gene_name=HSFY2;ID=exon:HG03009_ch_T0000545:4;Name=HSFY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	20792309	20795121	.	-	.	source_transcript=hg002_chrY_paternal_413.2;source_transcript_name=hg002_chrY_paternal_413.1;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.2,hg002_chrY_paternal_413.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000545;gene_id=HG03009_ch_G0000195;Parent=HG03009_ch_T0000545;transcript_name=hg002_chrY_paternal_413.1;gene_name=HSFY2;ID=intron:HG03009_ch_T0000545:4;Name=HSFY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	20795122	20795751	.	-	.	source_transcript=hg002_chrY_paternal_413.2;source_transcript_name=hg002_chrY_paternal_413.1;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.2,hg002_chrY_paternal_413.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000545;gene_id=HG03009_ch_G0000195;Parent=HG03009_ch_T0000545;transcript_name=hg002_chrY_paternal_413.1;gene_name=HSFY2;ID=exon:HG03009_ch_T0000545:5;Name=HSFY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	20791524	20795751	100	-	.	source_transcript=hg002_chrY_paternal_413.3;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.3,hg002_chrY_paternal_413.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000546;gene_id=HG03009_ch_G0000195;Parent=HG03009_ch_G0000195;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=HG03009_ch_T0000546;Name=HSFY2
HG03009_chrY	CAT	exon	20791524	20791635	.	-	.	source_transcript=hg002_chrY_paternal_413.3;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.3,hg002_chrY_paternal_413.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000546;gene_id=HG03009_ch_G0000195;Parent=HG03009_ch_T0000546;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=exon:HG03009_ch_T0000546:0;Name=HSFY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	20791614	20791635	.	-	1	source_transcript=hg002_chrY_paternal_413.3;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.3,hg002_chrY_paternal_413.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000546;gene_id=HG03009_ch_G0000195;Parent=HG03009_ch_T0000546;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=CDS:HG03009_ch_T0000546:0;Name=HSFY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	20791614	20791616	.	-	0	source_transcript=hg002_chrY_paternal_413.3;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.3,hg002_chrY_paternal_413.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000546;gene_id=HG03009_ch_G0000195;Parent=HG03009_ch_T0000546;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=stop_codon:HG03009_ch_T0000546;Name=HSFY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	20791636	20792198	.	-	.	source_transcript=hg002_chrY_paternal_413.3;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.3,hg002_chrY_paternal_413.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000546;gene_id=HG03009_ch_G0000195;Parent=HG03009_ch_T0000546;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=intron:HG03009_ch_T0000546:0;Name=HSFY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	20792199	20792308	.	-	.	source_transcript=hg002_chrY_paternal_413.3;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.3,hg002_chrY_paternal_413.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000546;gene_id=HG03009_ch_G0000195;Parent=HG03009_ch_T0000546;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=exon:HG03009_ch_T0000546:1;Name=HSFY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	20792199	20792308	.	-	0	source_transcript=hg002_chrY_paternal_413.3;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.3,hg002_chrY_paternal_413.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000546;gene_id=HG03009_ch_G0000195;Parent=HG03009_ch_T0000546;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=CDS:HG03009_ch_T0000546:1;Name=HSFY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	20792309	20795121	.	-	.	source_transcript=hg002_chrY_paternal_413.3;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.3,hg002_chrY_paternal_413.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000546;gene_id=HG03009_ch_G0000195;Parent=HG03009_ch_T0000546;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=intron:HG03009_ch_T0000546:1;Name=HSFY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	20795122	20795751	.	-	.	source_transcript=hg002_chrY_paternal_413.3;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.3,hg002_chrY_paternal_413.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000546;gene_id=HG03009_ch_G0000195;Parent=HG03009_ch_T0000546;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=exon:HG03009_ch_T0000546:2;Name=HSFY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	20795122	20795634	.	-	0	source_transcript=hg002_chrY_paternal_413.3;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.3,hg002_chrY_paternal_413.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000546;gene_id=HG03009_ch_G0000195;Parent=HG03009_ch_T0000546;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=CDS:HG03009_ch_T0000546:2;Name=HSFY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	20795632	20795634	.	-	0	source_transcript=hg002_chrY_paternal_413.3;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.3,hg002_chrY_paternal_413.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000546;gene_id=HG03009_ch_G0000195;Parent=HG03009_ch_T0000546;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=start_codon:HG03009_ch_T0000546;Name=HSFY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	20793830	20795742	100	-	.	source_transcript=hg002_chrY_paternal_413.4;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.4,hg002_chrY_paternal_413.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000547;gene_id=HG03009_ch_G0000195;Parent=HG03009_ch_G0000195;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=HG03009_ch_T0000547;Name=HSFY2
HG03009_chrY	CAT	exon	20793830	20794643	.	-	.	source_transcript=hg002_chrY_paternal_413.4;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.4,hg002_chrY_paternal_413.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000547;gene_id=HG03009_ch_G0000195;Parent=HG03009_ch_T0000547;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=exon:HG03009_ch_T0000547:0;Name=HSFY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	20793951	20794643	.	-	0	source_transcript=hg002_chrY_paternal_413.4;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.4,hg002_chrY_paternal_413.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000547;gene_id=HG03009_ch_G0000195;Parent=HG03009_ch_T0000547;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=CDS:HG03009_ch_T0000547:0;Name=HSFY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	20793951	20793953	.	-	0	source_transcript=hg002_chrY_paternal_413.4;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.4,hg002_chrY_paternal_413.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000547;gene_id=HG03009_ch_G0000195;Parent=HG03009_ch_T0000547;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=stop_codon:HG03009_ch_T0000547;Name=HSFY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	20794644	20795121	.	-	.	source_transcript=hg002_chrY_paternal_413.4;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.4,hg002_chrY_paternal_413.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000547;gene_id=HG03009_ch_G0000195;Parent=HG03009_ch_T0000547;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=intron:HG03009_ch_T0000547:0;Name=HSFY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	20795122	20795389	.	-	.	source_transcript=hg002_chrY_paternal_413.4;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.4,hg002_chrY_paternal_413.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000547;gene_id=HG03009_ch_G0000195;Parent=HG03009_ch_T0000547;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=exon:HG03009_ch_T0000547:1;Name=HSFY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	20795122	20795389	.	-	1	source_transcript=hg002_chrY_paternal_413.4;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.4,hg002_chrY_paternal_413.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000547;gene_id=HG03009_ch_G0000195;Parent=HG03009_ch_T0000547;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=CDS:HG03009_ch_T0000547:1;Name=HSFY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	20795390	20795487	.	-	.	source_transcript=hg002_chrY_paternal_413.4;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.4,hg002_chrY_paternal_413.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000547;gene_id=HG03009_ch_G0000195;Parent=HG03009_ch_T0000547;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=intron:HG03009_ch_T0000547:1;Name=HSFY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	20795488	20795742	.	-	.	source_transcript=hg002_chrY_paternal_413.4;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.4,hg002_chrY_paternal_413.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000547;gene_id=HG03009_ch_G0000195;Parent=HG03009_ch_T0000547;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=exon:HG03009_ch_T0000547:2;Name=HSFY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	20795488	20795498	.	-	0	source_transcript=hg002_chrY_paternal_413.4;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.4,hg002_chrY_paternal_413.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000547;gene_id=HG03009_ch_G0000195;Parent=HG03009_ch_T0000547;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=CDS:HG03009_ch_T0000547:2;Name=HSFY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	20795496	20795498	.	-	0	source_transcript=hg002_chrY_paternal_413.4;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.4,hg002_chrY_paternal_413.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000547;gene_id=HG03009_ch_G0000195;Parent=HG03009_ch_T0000547;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=start_codon:HG03009_ch_T0000547;Name=HSFY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	20793830	20795751	100	-	.	source_transcript=hg002_chrY_paternal_413.5;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.5,hg002_chrY_paternal_413.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000548;gene_id=HG03009_ch_G0000195;Parent=HG03009_ch_G0000195;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=HG03009_ch_T0000548;Name=HSFY2
HG03009_chrY	CAT	exon	20793830	20794643	.	-	.	source_transcript=hg002_chrY_paternal_413.5;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.5,hg002_chrY_paternal_413.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000548;gene_id=HG03009_ch_G0000195;Parent=HG03009_ch_T0000548;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=exon:HG03009_ch_T0000548:0;Name=HSFY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	20793951	20794643	.	-	0	source_transcript=hg002_chrY_paternal_413.5;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.5,hg002_chrY_paternal_413.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000548;gene_id=HG03009_ch_G0000195;Parent=HG03009_ch_T0000548;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=CDS:HG03009_ch_T0000548:0;Name=HSFY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	20793951	20793953	.	-	0	source_transcript=hg002_chrY_paternal_413.5;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.5,hg002_chrY_paternal_413.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000548;gene_id=HG03009_ch_G0000195;Parent=HG03009_ch_T0000548;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=stop_codon:HG03009_ch_T0000548;Name=HSFY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	20794644	20795121	.	-	.	source_transcript=hg002_chrY_paternal_413.5;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.5,hg002_chrY_paternal_413.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000548;gene_id=HG03009_ch_G0000195;Parent=HG03009_ch_T0000548;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=intron:HG03009_ch_T0000548:0;Name=HSFY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	20795122	20795751	.	-	.	source_transcript=hg002_chrY_paternal_413.5;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.5,hg002_chrY_paternal_413.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000548;gene_id=HG03009_ch_G0000195;Parent=HG03009_ch_T0000548;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=exon:HG03009_ch_T0000548:1;Name=HSFY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	20795122	20795634	.	-	0	source_transcript=hg002_chrY_paternal_413.5;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.5,hg002_chrY_paternal_413.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000548;gene_id=HG03009_ch_G0000195;Parent=HG03009_ch_T0000548;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=CDS:HG03009_ch_T0000548:1;Name=HSFY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	20795632	20795634	.	-	0	source_transcript=hg002_chrY_paternal_413.5;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.5,hg002_chrY_paternal_413.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000548;gene_id=HG03009_ch_G0000195;Parent=HG03009_ch_T0000548;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=start_codon:HG03009_ch_T0000548;Name=HSFY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	20793830	20812780	100	-	.	source_transcript=hg002_chrY_paternal_413.6;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.6,hg002_chrY_paternal_413.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000549;gene_id=HG03009_ch_G0000195;Parent=HG03009_ch_G0000195;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=HG03009_ch_T0000549;Name=HSFY2
HG03009_chrY	CAT	exon	20793830	20794643	.	-	.	source_transcript=hg002_chrY_paternal_413.6;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.6,hg002_chrY_paternal_413.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000549;gene_id=HG03009_ch_G0000195;Parent=HG03009_ch_T0000549;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=exon:HG03009_ch_T0000549:0;Name=HSFY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	20793951	20794643	.	-	0	source_transcript=hg002_chrY_paternal_413.6;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.6,hg002_chrY_paternal_413.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000549;gene_id=HG03009_ch_G0000195;Parent=HG03009_ch_T0000549;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=CDS:HG03009_ch_T0000549:0;Name=HSFY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	20793951	20793953	.	-	0	source_transcript=hg002_chrY_paternal_413.6;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.6,hg002_chrY_paternal_413.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000549;gene_id=HG03009_ch_G0000195;Parent=HG03009_ch_T0000549;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=stop_codon:HG03009_ch_T0000549;Name=HSFY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	20794644	20795121	.	-	.	source_transcript=hg002_chrY_paternal_413.6;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.6,hg002_chrY_paternal_413.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000549;gene_id=HG03009_ch_G0000195;Parent=HG03009_ch_T0000549;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=intron:HG03009_ch_T0000549:0;Name=HSFY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	20795122	20795389	.	-	.	source_transcript=hg002_chrY_paternal_413.6;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.6,hg002_chrY_paternal_413.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000549;gene_id=HG03009_ch_G0000195;Parent=HG03009_ch_T0000549;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=exon:HG03009_ch_T0000549:1;Name=HSFY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	20795122	20795389	.	-	1	source_transcript=hg002_chrY_paternal_413.6;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.6,hg002_chrY_paternal_413.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000549;gene_id=HG03009_ch_G0000195;Parent=HG03009_ch_T0000549;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=CDS:HG03009_ch_T0000549:1;Name=HSFY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	20795390	20812585	.	-	.	source_transcript=hg002_chrY_paternal_413.6;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.6,hg002_chrY_paternal_413.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000549;gene_id=HG03009_ch_G0000195;Parent=HG03009_ch_T0000549;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=intron:HG03009_ch_T0000549:1;Name=HSFY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	20812586	20812780	.	-	.	source_transcript=hg002_chrY_paternal_413.6;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.6,hg002_chrY_paternal_413.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000549;gene_id=HG03009_ch_G0000195;Parent=HG03009_ch_T0000549;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=exon:HG03009_ch_T0000549:2;Name=HSFY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	20812586	20812611	.	-	0	source_transcript=hg002_chrY_paternal_413.6;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.6,hg002_chrY_paternal_413.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000549;gene_id=HG03009_ch_G0000195;Parent=HG03009_ch_T0000549;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=CDS:HG03009_ch_T0000549:2;Name=HSFY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	20812609	20812611	.	-	0	source_transcript=hg002_chrY_paternal_413.6;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.6,hg002_chrY_paternal_413.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000549;gene_id=HG03009_ch_G0000195;Parent=HG03009_ch_T0000549;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=start_codon:HG03009_ch_T0000549;Name=HSFY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	20824556	20858371	.	-	.	source_gene_common_name=LOC124905304;source_gene=hg002_chrY_paternal_398;gene_id=HG03009_ch_G0000196;gene_biotype=lncRNA;gene_name=LOC124905304;gene_sources=liftoff;ID=HG03009_ch_G0000196;Name=LOC124905304
HG03009_chrY	CAT	transcript	20824556	20858371	1000	-	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;transcript_id=HG03009_ch_T0000550;gene_id=HG03009_ch_G0000196;Parent=HG03009_ch_G0000196;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=HG03009_ch_T0000550;Name=LOC124905304
HG03009_chrY	CAT	exon	20824556	20826863	.	-	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;transcript_id=HG03009_ch_T0000550;gene_id=HG03009_ch_G0000196;Parent=HG03009_ch_T0000550;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=exon:HG03009_ch_T0000550:0;Name=LOC124905304;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	20826864	20835631	.	-	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;transcript_id=HG03009_ch_T0000550;gene_id=HG03009_ch_G0000196;Parent=HG03009_ch_T0000550;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=intron:HG03009_ch_T0000550:0;Name=LOC124905304;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	20835632	20835759	.	-	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;transcript_id=HG03009_ch_T0000550;gene_id=HG03009_ch_G0000196;Parent=HG03009_ch_T0000550;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=exon:HG03009_ch_T0000550:1;Name=LOC124905304;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	20835760	20841370	.	-	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;transcript_id=HG03009_ch_T0000550;gene_id=HG03009_ch_G0000196;Parent=HG03009_ch_T0000550;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=intron:HG03009_ch_T0000550:1;Name=LOC124905304;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	20841371	20841476	.	-	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;transcript_id=HG03009_ch_T0000550;gene_id=HG03009_ch_G0000196;Parent=HG03009_ch_T0000550;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=exon:HG03009_ch_T0000550:2;Name=LOC124905304;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	20841477	20841569	.	-	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;transcript_id=HG03009_ch_T0000550;gene_id=HG03009_ch_G0000196;Parent=HG03009_ch_T0000550;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=intron:HG03009_ch_T0000550:2;Name=LOC124905304;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	20841570	20841802	.	-	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;transcript_id=HG03009_ch_T0000550;gene_id=HG03009_ch_G0000196;Parent=HG03009_ch_T0000550;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=exon:HG03009_ch_T0000550:3;Name=LOC124905304;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	20841803	20850596	.	-	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;transcript_id=HG03009_ch_T0000550;gene_id=HG03009_ch_G0000196;Parent=HG03009_ch_T0000550;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=intron:HG03009_ch_T0000550:3;Name=LOC124905304;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	20850597	20850731	.	-	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;transcript_id=HG03009_ch_T0000550;gene_id=HG03009_ch_G0000196;Parent=HG03009_ch_T0000550;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=exon:HG03009_ch_T0000550:4;Name=LOC124905304;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	20850732	20852447	.	-	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;transcript_id=HG03009_ch_T0000550;gene_id=HG03009_ch_G0000196;Parent=HG03009_ch_T0000550;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=intron:HG03009_ch_T0000550:4;Name=LOC124905304;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	20852448	20852651	.	-	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;transcript_id=HG03009_ch_T0000550;gene_id=HG03009_ch_G0000196;Parent=HG03009_ch_T0000550;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=exon:HG03009_ch_T0000550:5;Name=LOC124905304;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	20852652	20855011	.	-	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;transcript_id=HG03009_ch_T0000550;gene_id=HG03009_ch_G0000196;Parent=HG03009_ch_T0000550;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=intron:HG03009_ch_T0000550:5;Name=LOC124905304;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	20855012	20855113	.	-	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;transcript_id=HG03009_ch_T0000550;gene_id=HG03009_ch_G0000196;Parent=HG03009_ch_T0000550;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=exon:HG03009_ch_T0000550:6;Name=LOC124905304;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	20855114	20855766	.	-	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;transcript_id=HG03009_ch_T0000550;gene_id=HG03009_ch_G0000196;Parent=HG03009_ch_T0000550;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=intron:HG03009_ch_T0000550:6;Name=LOC124905304;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	20855767	20855929	.	-	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;transcript_id=HG03009_ch_T0000550;gene_id=HG03009_ch_G0000196;Parent=HG03009_ch_T0000550;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=exon:HG03009_ch_T0000550:7;Name=LOC124905304;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	20855930	20858330	.	-	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;transcript_id=HG03009_ch_T0000550;gene_id=HG03009_ch_G0000196;Parent=HG03009_ch_T0000550;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=intron:HG03009_ch_T0000550:7;Name=LOC124905304;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	20858331	20858371	.	-	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;transcript_id=HG03009_ch_T0000550;gene_id=HG03009_ch_G0000196;Parent=HG03009_ch_T0000550;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=exon:HG03009_ch_T0000550:8;Name=LOC124905304;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	20894517	21099579	.	-	.	source_gene_common_name=TTTY14;source_gene=hg002_chrY_paternal_425;alternative_source_transcripts=hg002_chrY_paternal_425.1,hg002_chrY_paternal_425.1;gene_id=HG03009_ch_G0000197;gene_biotype=lncRNA;gene_name=TTTY14;gene_sources=liftoff;ID=HG03009_ch_G0000197;Name=TTTY14
HG03009_chrY	CAT	transcript	20894517	21098035	1000	-	.	source_transcript=hg002_chrY_paternal_425.1;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.1,hg002_chrY_paternal_425.1;transcript_id=HG03009_ch_T0000551;gene_id=HG03009_ch_G0000197;Parent=HG03009_ch_G0000197;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=HG03009_ch_T0000551;Name=TTTY14
HG03009_chrY	CAT	exon	20894517	20894850	.	-	.	source_transcript=hg002_chrY_paternal_425.1;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.1,hg002_chrY_paternal_425.1;transcript_id=HG03009_ch_T0000551;gene_id=HG03009_ch_G0000197;Parent=HG03009_ch_T0000551;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG03009_ch_T0000551:0;Name=TTTY14;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	20894851	20899083	.	-	.	source_transcript=hg002_chrY_paternal_425.1;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.1,hg002_chrY_paternal_425.1;transcript_id=HG03009_ch_T0000551;gene_id=HG03009_ch_G0000197;Parent=HG03009_ch_T0000551;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG03009_ch_T0000551:0;Name=TTTY14;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	20899084	20899221	.	-	.	source_transcript=hg002_chrY_paternal_425.1;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.1,hg002_chrY_paternal_425.1;transcript_id=HG03009_ch_T0000551;gene_id=HG03009_ch_G0000197;Parent=HG03009_ch_T0000551;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG03009_ch_T0000551:1;Name=TTTY14;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	20899222	20934399	.	-	.	source_transcript=hg002_chrY_paternal_425.1;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.1,hg002_chrY_paternal_425.1;transcript_id=HG03009_ch_T0000551;gene_id=HG03009_ch_G0000197;Parent=HG03009_ch_T0000551;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG03009_ch_T0000551:1;Name=TTTY14;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	20934400	20934514	.	-	.	source_transcript=hg002_chrY_paternal_425.1;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.1,hg002_chrY_paternal_425.1;transcript_id=HG03009_ch_T0000551;gene_id=HG03009_ch_G0000197;Parent=HG03009_ch_T0000551;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG03009_ch_T0000551:2;Name=TTTY14;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	20934515	21090754	.	-	.	source_transcript=hg002_chrY_paternal_425.1;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.1,hg002_chrY_paternal_425.1;transcript_id=HG03009_ch_T0000551;gene_id=HG03009_ch_G0000197;Parent=HG03009_ch_T0000551;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG03009_ch_T0000551:2;Name=TTTY14;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21090755	21090829	.	-	.	source_transcript=hg002_chrY_paternal_425.1;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.1,hg002_chrY_paternal_425.1;transcript_id=HG03009_ch_T0000551;gene_id=HG03009_ch_G0000197;Parent=HG03009_ch_T0000551;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG03009_ch_T0000551:3;Name=TTTY14;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21090830	21097972	.	-	.	source_transcript=hg002_chrY_paternal_425.1;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.1,hg002_chrY_paternal_425.1;transcript_id=HG03009_ch_T0000551;gene_id=HG03009_ch_G0000197;Parent=HG03009_ch_T0000551;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG03009_ch_T0000551:3;Name=TTTY14;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21097973	21098035	.	-	.	source_transcript=hg002_chrY_paternal_425.1;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.1,hg002_chrY_paternal_425.1;transcript_id=HG03009_ch_T0000551;gene_id=HG03009_ch_G0000197;Parent=HG03009_ch_T0000551;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG03009_ch_T0000551:4;Name=TTTY14;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	20894517	21098061	1000	-	.	source_transcript=hg002_chrY_paternal_425.2;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.2,hg002_chrY_paternal_425.2;transcript_id=HG03009_ch_T0000552;gene_id=HG03009_ch_G0000197;Parent=HG03009_ch_G0000197;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=HG03009_ch_T0000552;Name=TTTY14
HG03009_chrY	CAT	exon	20894517	20894850	.	-	.	source_transcript=hg002_chrY_paternal_425.2;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.2,hg002_chrY_paternal_425.2;transcript_id=HG03009_ch_T0000552;gene_id=HG03009_ch_G0000197;Parent=HG03009_ch_T0000552;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG03009_ch_T0000552:0;Name=TTTY14;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	20894851	20899083	.	-	.	source_transcript=hg002_chrY_paternal_425.2;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.2,hg002_chrY_paternal_425.2;transcript_id=HG03009_ch_T0000552;gene_id=HG03009_ch_G0000197;Parent=HG03009_ch_T0000552;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG03009_ch_T0000552:0;Name=TTTY14;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	20899084	20899221	.	-	.	source_transcript=hg002_chrY_paternal_425.2;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.2,hg002_chrY_paternal_425.2;transcript_id=HG03009_ch_T0000552;gene_id=HG03009_ch_G0000197;Parent=HG03009_ch_T0000552;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG03009_ch_T0000552:1;Name=TTTY14;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	20899222	21095530	.	-	.	source_transcript=hg002_chrY_paternal_425.2;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.2,hg002_chrY_paternal_425.2;transcript_id=HG03009_ch_T0000552;gene_id=HG03009_ch_G0000197;Parent=HG03009_ch_T0000552;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG03009_ch_T0000552:1;Name=TTTY14;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21095531	21095593	.	-	.	source_transcript=hg002_chrY_paternal_425.2;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.2,hg002_chrY_paternal_425.2;transcript_id=HG03009_ch_T0000552;gene_id=HG03009_ch_G0000197;Parent=HG03009_ch_T0000552;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG03009_ch_T0000552:2;Name=TTTY14;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21095594	21097972	.	-	.	source_transcript=hg002_chrY_paternal_425.2;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.2,hg002_chrY_paternal_425.2;transcript_id=HG03009_ch_T0000552;gene_id=HG03009_ch_G0000197;Parent=HG03009_ch_T0000552;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG03009_ch_T0000552:2;Name=TTTY14;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21097973	21098061	.	-	.	source_transcript=hg002_chrY_paternal_425.2;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.2,hg002_chrY_paternal_425.2;transcript_id=HG03009_ch_T0000552;gene_id=HG03009_ch_G0000197;Parent=HG03009_ch_T0000552;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG03009_ch_T0000552:3;Name=TTTY14;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	20894517	21099579	1000	-	.	source_transcript=hg002_chrY_paternal_425.3;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.3,hg002_chrY_paternal_425.3;transcript_id=HG03009_ch_T0000553;gene_id=HG03009_ch_G0000197;Parent=HG03009_ch_G0000197;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=HG03009_ch_T0000553;Name=TTTY14
HG03009_chrY	CAT	exon	20894517	20894850	.	-	.	source_transcript=hg002_chrY_paternal_425.3;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.3,hg002_chrY_paternal_425.3;transcript_id=HG03009_ch_T0000553;gene_id=HG03009_ch_G0000197;Parent=HG03009_ch_T0000553;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG03009_ch_T0000553:0;Name=TTTY14;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	20894851	20954774	.	-	.	source_transcript=hg002_chrY_paternal_425.3;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.3,hg002_chrY_paternal_425.3;transcript_id=HG03009_ch_T0000553;gene_id=HG03009_ch_G0000197;Parent=HG03009_ch_T0000553;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG03009_ch_T0000553:0;Name=TTTY14;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	20954775	20954873	.	-	.	source_transcript=hg002_chrY_paternal_425.3;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.3,hg002_chrY_paternal_425.3;transcript_id=HG03009_ch_T0000553;gene_id=HG03009_ch_G0000197;Parent=HG03009_ch_T0000553;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG03009_ch_T0000553:1;Name=TTTY14;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	20954874	20955388	.	-	.	source_transcript=hg002_chrY_paternal_425.3;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.3,hg002_chrY_paternal_425.3;transcript_id=HG03009_ch_T0000553;gene_id=HG03009_ch_G0000197;Parent=HG03009_ch_T0000553;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG03009_ch_T0000553:1;Name=TTTY14;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	20955389	20955507	.	-	.	source_transcript=hg002_chrY_paternal_425.3;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.3,hg002_chrY_paternal_425.3;transcript_id=HG03009_ch_T0000553;gene_id=HG03009_ch_G0000197;Parent=HG03009_ch_T0000553;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG03009_ch_T0000553:2;Name=TTTY14;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	20955508	21090754	.	-	.	source_transcript=hg002_chrY_paternal_425.3;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.3,hg002_chrY_paternal_425.3;transcript_id=HG03009_ch_T0000553;gene_id=HG03009_ch_G0000197;Parent=HG03009_ch_T0000553;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG03009_ch_T0000553:2;Name=TTTY14;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21090755	21090829	.	-	.	source_transcript=hg002_chrY_paternal_425.3;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.3,hg002_chrY_paternal_425.3;transcript_id=HG03009_ch_T0000553;gene_id=HG03009_ch_G0000197;Parent=HG03009_ch_T0000553;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG03009_ch_T0000553:3;Name=TTTY14;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21090830	21099076	.	-	.	source_transcript=hg002_chrY_paternal_425.3;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.3,hg002_chrY_paternal_425.3;transcript_id=HG03009_ch_T0000553;gene_id=HG03009_ch_G0000197;Parent=HG03009_ch_T0000553;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG03009_ch_T0000553:3;Name=TTTY14;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21099077	21099579	.	-	.	source_transcript=hg002_chrY_paternal_425.3;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.3,hg002_chrY_paternal_425.3;transcript_id=HG03009_ch_T0000553;gene_id=HG03009_ch_G0000197;Parent=HG03009_ch_T0000553;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG03009_ch_T0000553:4;Name=TTTY14;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	20894517	21099579	1000	-	.	source_transcript=hg002_chrY_paternal_425.4;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.4,hg002_chrY_paternal_425.4;transcript_id=HG03009_ch_T0000554;gene_id=HG03009_ch_G0000197;Parent=HG03009_ch_G0000197;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=HG03009_ch_T0000554;Name=TTTY14
HG03009_chrY	CAT	exon	20894517	20894850	.	-	.	source_transcript=hg002_chrY_paternal_425.4;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.4,hg002_chrY_paternal_425.4;transcript_id=HG03009_ch_T0000554;gene_id=HG03009_ch_G0000197;Parent=HG03009_ch_T0000554;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG03009_ch_T0000554:0;Name=TTTY14;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	20894851	20899083	.	-	.	source_transcript=hg002_chrY_paternal_425.4;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.4,hg002_chrY_paternal_425.4;transcript_id=HG03009_ch_T0000554;gene_id=HG03009_ch_G0000197;Parent=HG03009_ch_T0000554;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG03009_ch_T0000554:0;Name=TTTY14;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	20899084	20899221	.	-	.	source_transcript=hg002_chrY_paternal_425.4;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.4,hg002_chrY_paternal_425.4;transcript_id=HG03009_ch_T0000554;gene_id=HG03009_ch_G0000197;Parent=HG03009_ch_T0000554;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG03009_ch_T0000554:1;Name=TTTY14;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	20899222	21090754	.	-	.	source_transcript=hg002_chrY_paternal_425.4;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.4,hg002_chrY_paternal_425.4;transcript_id=HG03009_ch_T0000554;gene_id=HG03009_ch_G0000197;Parent=HG03009_ch_T0000554;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG03009_ch_T0000554:1;Name=TTTY14;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21090755	21090829	.	-	.	source_transcript=hg002_chrY_paternal_425.4;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.4,hg002_chrY_paternal_425.4;transcript_id=HG03009_ch_T0000554;gene_id=HG03009_ch_G0000197;Parent=HG03009_ch_T0000554;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG03009_ch_T0000554:2;Name=TTTY14;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21090830	21099076	.	-	.	source_transcript=hg002_chrY_paternal_425.4;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.4,hg002_chrY_paternal_425.4;transcript_id=HG03009_ch_T0000554;gene_id=HG03009_ch_G0000197;Parent=HG03009_ch_T0000554;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG03009_ch_T0000554:2;Name=TTTY14;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21099077	21099579	.	-	.	source_transcript=hg002_chrY_paternal_425.4;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.4,hg002_chrY_paternal_425.4;transcript_id=HG03009_ch_T0000554;gene_id=HG03009_ch_G0000197;Parent=HG03009_ch_T0000554;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG03009_ch_T0000554:3;Name=TTTY14;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	20894517	21099579	1000	-	.	source_transcript=hg002_chrY_paternal_425.5;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.5,hg002_chrY_paternal_425.5;transcript_id=HG03009_ch_T0000555;gene_id=HG03009_ch_G0000197;Parent=HG03009_ch_G0000197;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=HG03009_ch_T0000555;Name=TTTY14
HG03009_chrY	CAT	exon	20894517	20894850	.	-	.	source_transcript=hg002_chrY_paternal_425.5;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.5,hg002_chrY_paternal_425.5;transcript_id=HG03009_ch_T0000555;gene_id=HG03009_ch_G0000197;Parent=HG03009_ch_T0000555;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG03009_ch_T0000555:0;Name=TTTY14;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	20894851	20899083	.	-	.	source_transcript=hg002_chrY_paternal_425.5;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.5,hg002_chrY_paternal_425.5;transcript_id=HG03009_ch_T0000555;gene_id=HG03009_ch_G0000197;Parent=HG03009_ch_T0000555;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG03009_ch_T0000555:0;Name=TTTY14;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	20899084	20899221	.	-	.	source_transcript=hg002_chrY_paternal_425.5;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.5,hg002_chrY_paternal_425.5;transcript_id=HG03009_ch_T0000555;gene_id=HG03009_ch_G0000197;Parent=HG03009_ch_T0000555;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG03009_ch_T0000555:1;Name=TTTY14;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	20899222	21099076	.	-	.	source_transcript=hg002_chrY_paternal_425.5;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.5,hg002_chrY_paternal_425.5;transcript_id=HG03009_ch_T0000555;gene_id=HG03009_ch_G0000197;Parent=HG03009_ch_T0000555;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG03009_ch_T0000555:1;Name=TTTY14;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21099077	21099579	.	-	.	source_transcript=hg002_chrY_paternal_425.5;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.5,hg002_chrY_paternal_425.5;transcript_id=HG03009_ch_T0000555;gene_id=HG03009_ch_G0000197;Parent=HG03009_ch_T0000555;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG03009_ch_T0000555:2;Name=TTTY14;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	20954039	21098061	1000	-	.	source_transcript=hg002_chrY_paternal_425.6;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.6;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.6,hg002_chrY_paternal_425.6;transcript_id=HG03009_ch_T0000556;gene_id=HG03009_ch_G0000197;Parent=HG03009_ch_G0000197;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=HG03009_ch_T0000556;Name=TTTY14
HG03009_chrY	CAT	exon	20954039	20954873	.	-	.	source_transcript=hg002_chrY_paternal_425.6;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.6,hg002_chrY_paternal_425.6;transcript_id=HG03009_ch_T0000556;gene_id=HG03009_ch_G0000197;Parent=HG03009_ch_T0000556;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG03009_ch_T0000556:0;Name=TTTY14;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	20954874	21066573	.	-	.	source_transcript=hg002_chrY_paternal_425.6;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.6,hg002_chrY_paternal_425.6;transcript_id=HG03009_ch_T0000556;gene_id=HG03009_ch_G0000197;Parent=HG03009_ch_T0000556;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG03009_ch_T0000556:0;Name=TTTY14;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21066574	21066727	.	-	.	source_transcript=hg002_chrY_paternal_425.6;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.6,hg002_chrY_paternal_425.6;transcript_id=HG03009_ch_T0000556;gene_id=HG03009_ch_G0000197;Parent=HG03009_ch_T0000556;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG03009_ch_T0000556:1;Name=TTTY14;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21066728	21067273	.	-	.	source_transcript=hg002_chrY_paternal_425.6;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.6,hg002_chrY_paternal_425.6;transcript_id=HG03009_ch_T0000556;gene_id=HG03009_ch_G0000197;Parent=HG03009_ch_T0000556;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG03009_ch_T0000556:1;Name=TTTY14;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21067274	21067323	.	-	.	source_transcript=hg002_chrY_paternal_425.6;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.6,hg002_chrY_paternal_425.6;transcript_id=HG03009_ch_T0000556;gene_id=HG03009_ch_G0000197;Parent=HG03009_ch_T0000556;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG03009_ch_T0000556:2;Name=TTTY14;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21067324	21090754	.	-	.	source_transcript=hg002_chrY_paternal_425.6;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.6,hg002_chrY_paternal_425.6;transcript_id=HG03009_ch_T0000556;gene_id=HG03009_ch_G0000197;Parent=HG03009_ch_T0000556;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG03009_ch_T0000556:2;Name=TTTY14;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21090755	21090829	.	-	.	source_transcript=hg002_chrY_paternal_425.6;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.6,hg002_chrY_paternal_425.6;transcript_id=HG03009_ch_T0000556;gene_id=HG03009_ch_G0000197;Parent=HG03009_ch_T0000556;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG03009_ch_T0000556:3;Name=TTTY14;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21090830	21097972	.	-	.	source_transcript=hg002_chrY_paternal_425.6;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.6,hg002_chrY_paternal_425.6;transcript_id=HG03009_ch_T0000556;gene_id=HG03009_ch_G0000197;Parent=HG03009_ch_T0000556;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG03009_ch_T0000556:3;Name=TTTY14;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21097973	21098061	.	-	.	source_transcript=hg002_chrY_paternal_425.6;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.6,hg002_chrY_paternal_425.6;transcript_id=HG03009_ch_T0000556;gene_id=HG03009_ch_G0000197;Parent=HG03009_ch_T0000556;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG03009_ch_T0000556:4;Name=TTTY14;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	20954483	21098035	1000	-	.	source_transcript=hg002_chrY_paternal_425.7;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.7;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.7,hg002_chrY_paternal_425.7;transcript_id=HG03009_ch_T0000557;gene_id=HG03009_ch_G0000197;Parent=HG03009_ch_G0000197;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=HG03009_ch_T0000557;Name=TTTY14
HG03009_chrY	CAT	exon	20954483	20954873	.	-	.	source_transcript=hg002_chrY_paternal_425.7;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.7,hg002_chrY_paternal_425.7;transcript_id=HG03009_ch_T0000557;gene_id=HG03009_ch_G0000197;Parent=HG03009_ch_T0000557;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG03009_ch_T0000557:0;Name=TTTY14;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	20954874	21090754	.	-	.	source_transcript=hg002_chrY_paternal_425.7;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.7,hg002_chrY_paternal_425.7;transcript_id=HG03009_ch_T0000557;gene_id=HG03009_ch_G0000197;Parent=HG03009_ch_T0000557;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG03009_ch_T0000557:0;Name=TTTY14;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21090755	21090829	.	-	.	source_transcript=hg002_chrY_paternal_425.7;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.7,hg002_chrY_paternal_425.7;transcript_id=HG03009_ch_T0000557;gene_id=HG03009_ch_G0000197;Parent=HG03009_ch_T0000557;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG03009_ch_T0000557:1;Name=TTTY14;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21090830	21097972	.	-	.	source_transcript=hg002_chrY_paternal_425.7;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.7,hg002_chrY_paternal_425.7;transcript_id=HG03009_ch_T0000557;gene_id=HG03009_ch_G0000197;Parent=HG03009_ch_T0000557;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG03009_ch_T0000557:1;Name=TTTY14;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21097973	21098035	.	-	.	source_transcript=hg002_chrY_paternal_425.7;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.7,hg002_chrY_paternal_425.7;transcript_id=HG03009_ch_T0000557;gene_id=HG03009_ch_G0000197;Parent=HG03009_ch_T0000557;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG03009_ch_T0000557:2;Name=TTTY14;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	20954483	21099579	1000	-	.	source_transcript=hg002_chrY_paternal_425.8;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.8;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.8,hg002_chrY_paternal_425.8;transcript_id=HG03009_ch_T0000558;gene_id=HG03009_ch_G0000197;Parent=HG03009_ch_G0000197;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=HG03009_ch_T0000558;Name=TTTY14
HG03009_chrY	CAT	exon	20954483	20954873	.	-	.	source_transcript=hg002_chrY_paternal_425.8;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.8,hg002_chrY_paternal_425.8;transcript_id=HG03009_ch_T0000558;gene_id=HG03009_ch_G0000197;Parent=HG03009_ch_T0000558;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG03009_ch_T0000558:0;Name=TTTY14;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	20954874	21099076	.	-	.	source_transcript=hg002_chrY_paternal_425.8;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.8,hg002_chrY_paternal_425.8;transcript_id=HG03009_ch_T0000558;gene_id=HG03009_ch_G0000197;Parent=HG03009_ch_T0000558;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG03009_ch_T0000558:0;Name=TTTY14;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21099077	21099579	.	-	.	source_transcript=hg002_chrY_paternal_425.8;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.8,hg002_chrY_paternal_425.8;transcript_id=HG03009_ch_T0000558;gene_id=HG03009_ch_G0000197;Parent=HG03009_ch_T0000558;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG03009_ch_T0000558:1;Name=TTTY14;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	21101888	21110910	.	+	.	source_gene_common_name=LOC124905306;source_gene=hg002_chrY_paternal_429;alternative_source_transcripts=hg002_chrY_paternal_429.1,hg002_chrY_paternal_429.1;gene_id=HG03009_ch_G0000198;gene_biotype=lncRNA;gene_name=LOC124905306;gene_sources=liftoff;ID=HG03009_ch_G0000198;Name=LOC124905306
HG03009_chrY	CAT	transcript	21101888	21110910	1000	+	.	source_transcript=hg002_chrY_paternal_429.1;source_transcript_name=hg002_chrY_paternal_429.1;source_gene=hg002_chrY_paternal_429;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_429;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_429.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_429.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905306;alternative_source_transcripts=hg002_chrY_paternal_429.1,hg002_chrY_paternal_429.1;transcript_id=HG03009_ch_T0000559;gene_id=HG03009_ch_G0000198;Parent=HG03009_ch_G0000198;transcript_name=hg002_chrY_paternal_429.1;gene_name=LOC124905306;ID=HG03009_ch_T0000559;Name=LOC124905306
HG03009_chrY	CAT	exon	21101888	21102757	.	+	.	source_transcript=hg002_chrY_paternal_429.1;source_transcript_name=hg002_chrY_paternal_429.1;source_gene=hg002_chrY_paternal_429;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_429;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_429.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_429.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905306;alternative_source_transcripts=hg002_chrY_paternal_429.1,hg002_chrY_paternal_429.1;transcript_id=HG03009_ch_T0000559;gene_id=HG03009_ch_G0000198;Parent=HG03009_ch_T0000559;transcript_name=hg002_chrY_paternal_429.1;gene_name=LOC124905306;ID=exon:HG03009_ch_T0000559:0;Name=LOC124905306;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21102758	21108531	.	+	.	source_transcript=hg002_chrY_paternal_429.1;source_transcript_name=hg002_chrY_paternal_429.1;source_gene=hg002_chrY_paternal_429;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_429;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_429.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_429.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905306;alternative_source_transcripts=hg002_chrY_paternal_429.1,hg002_chrY_paternal_429.1;transcript_id=HG03009_ch_T0000559;gene_id=HG03009_ch_G0000198;Parent=HG03009_ch_T0000559;transcript_name=hg002_chrY_paternal_429.1;gene_name=LOC124905306;ID=intron:HG03009_ch_T0000559:0;Name=LOC124905306;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21108532	21110910	.	+	.	source_transcript=hg002_chrY_paternal_429.1;source_transcript_name=hg002_chrY_paternal_429.1;source_gene=hg002_chrY_paternal_429;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_429;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_429.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_429.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905306;alternative_source_transcripts=hg002_chrY_paternal_429.1,hg002_chrY_paternal_429.1;transcript_id=HG03009_ch_T0000559;gene_id=HG03009_ch_G0000198;Parent=HG03009_ch_T0000559;transcript_name=hg002_chrY_paternal_429.1;gene_name=LOC124905306;ID=exon:HG03009_ch_T0000559:1;Name=LOC124905306;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	21477459	21525189	.	-	.	source_gene_common_name=BCORP1;source_gene=hg002_chrY_paternal_431;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;gene_id=HG03009_ch_G0000199;gene_biotype=transcribed_pseudogene;gene_name=BCORP1;gene_sources=liftoff;ID=HG03009_ch_G0000199;Name=BCORP1
HG03009_chrY	CAT	transcript	21477459	21525189	1000	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG03009_ch_T0000560;gene_id=HG03009_ch_G0000199;Parent=HG03009_ch_G0000199;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=HG03009_ch_T0000560;Name=BCORP1
HG03009_chrY	CAT	exon	21477459	21478893	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG03009_ch_T0000560;gene_id=HG03009_ch_G0000199;Parent=HG03009_ch_T0000560;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG03009_ch_T0000560:0;Name=BCORP1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21478894	21480957	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG03009_ch_T0000560;gene_id=HG03009_ch_G0000199;Parent=HG03009_ch_T0000560;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG03009_ch_T0000560:0;Name=BCORP1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21480958	21481113	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG03009_ch_T0000560;gene_id=HG03009_ch_G0000199;Parent=HG03009_ch_T0000560;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG03009_ch_T0000560:1;Name=BCORP1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21481114	21481322	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG03009_ch_T0000560;gene_id=HG03009_ch_G0000199;Parent=HG03009_ch_T0000560;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG03009_ch_T0000560:1;Name=BCORP1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21481323	21481400	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG03009_ch_T0000560;gene_id=HG03009_ch_G0000199;Parent=HG03009_ch_T0000560;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG03009_ch_T0000560:2;Name=BCORP1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21481401	21487140	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG03009_ch_T0000560;gene_id=HG03009_ch_G0000199;Parent=HG03009_ch_T0000560;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG03009_ch_T0000560:2;Name=BCORP1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21487141	21487262	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG03009_ch_T0000560;gene_id=HG03009_ch_G0000199;Parent=HG03009_ch_T0000560;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG03009_ch_T0000560:3;Name=BCORP1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21487263	21488490	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG03009_ch_T0000560;gene_id=HG03009_ch_G0000199;Parent=HG03009_ch_T0000560;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG03009_ch_T0000560:3;Name=BCORP1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21488491	21489409	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG03009_ch_T0000560;gene_id=HG03009_ch_G0000199;Parent=HG03009_ch_T0000560;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG03009_ch_T0000560:4;Name=BCORP1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21489410	21495939	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG03009_ch_T0000560;gene_id=HG03009_ch_G0000199;Parent=HG03009_ch_T0000560;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG03009_ch_T0000560:4;Name=BCORP1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21495940	21496179	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG03009_ch_T0000560;gene_id=HG03009_ch_G0000199;Parent=HG03009_ch_T0000560;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG03009_ch_T0000560:5;Name=BCORP1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21496180	21496674	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG03009_ch_T0000560;gene_id=HG03009_ch_G0000199;Parent=HG03009_ch_T0000560;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG03009_ch_T0000560:5;Name=BCORP1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21496675	21496938	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG03009_ch_T0000560;gene_id=HG03009_ch_G0000199;Parent=HG03009_ch_T0000560;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG03009_ch_T0000560:6;Name=BCORP1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21496939	21502204	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG03009_ch_T0000560;gene_id=HG03009_ch_G0000199;Parent=HG03009_ch_T0000560;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG03009_ch_T0000560:6;Name=BCORP1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21502205	21502330	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG03009_ch_T0000560;gene_id=HG03009_ch_G0000199;Parent=HG03009_ch_T0000560;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG03009_ch_T0000560:7;Name=BCORP1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21502331	21525067	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG03009_ch_T0000560;gene_id=HG03009_ch_G0000199;Parent=HG03009_ch_T0000560;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG03009_ch_T0000560:7;Name=BCORP1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21525068	21525189	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG03009_ch_T0000560;gene_id=HG03009_ch_G0000199;Parent=HG03009_ch_T0000560;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG03009_ch_T0000560:8;Name=BCORP1;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	21477459	21525189	1000	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG03009_ch_T0000561;gene_id=HG03009_ch_G0000199;Parent=HG03009_ch_G0000199;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=HG03009_ch_T0000561;Name=BCORP1
HG03009_chrY	CAT	exon	21477459	21478893	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG03009_ch_T0000561;gene_id=HG03009_ch_G0000199;Parent=HG03009_ch_T0000561;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG03009_ch_T0000561:0;Name=BCORP1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21478894	21479085	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG03009_ch_T0000561;gene_id=HG03009_ch_G0000199;Parent=HG03009_ch_T0000561;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG03009_ch_T0000561:0;Name=BCORP1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21479086	21479146	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG03009_ch_T0000561;gene_id=HG03009_ch_G0000199;Parent=HG03009_ch_T0000561;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG03009_ch_T0000561:1;Name=BCORP1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21479147	21480957	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG03009_ch_T0000561;gene_id=HG03009_ch_G0000199;Parent=HG03009_ch_T0000561;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG03009_ch_T0000561:1;Name=BCORP1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21480958	21481113	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG03009_ch_T0000561;gene_id=HG03009_ch_G0000199;Parent=HG03009_ch_T0000561;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG03009_ch_T0000561:2;Name=BCORP1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21481114	21481322	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG03009_ch_T0000561;gene_id=HG03009_ch_G0000199;Parent=HG03009_ch_T0000561;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG03009_ch_T0000561:2;Name=BCORP1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21481323	21481400	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG03009_ch_T0000561;gene_id=HG03009_ch_G0000199;Parent=HG03009_ch_T0000561;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG03009_ch_T0000561:3;Name=BCORP1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21481401	21481992	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG03009_ch_T0000561;gene_id=HG03009_ch_G0000199;Parent=HG03009_ch_T0000561;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG03009_ch_T0000561:3;Name=BCORP1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21481993	21482138	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG03009_ch_T0000561;gene_id=HG03009_ch_G0000199;Parent=HG03009_ch_T0000561;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG03009_ch_T0000561:4;Name=BCORP1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21482139	21487140	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG03009_ch_T0000561;gene_id=HG03009_ch_G0000199;Parent=HG03009_ch_T0000561;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG03009_ch_T0000561:4;Name=BCORP1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21487141	21487262	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG03009_ch_T0000561;gene_id=HG03009_ch_G0000199;Parent=HG03009_ch_T0000561;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG03009_ch_T0000561:5;Name=BCORP1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21487263	21488490	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG03009_ch_T0000561;gene_id=HG03009_ch_G0000199;Parent=HG03009_ch_T0000561;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG03009_ch_T0000561:5;Name=BCORP1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21488491	21489409	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG03009_ch_T0000561;gene_id=HG03009_ch_G0000199;Parent=HG03009_ch_T0000561;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG03009_ch_T0000561:6;Name=BCORP1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21489410	21495939	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG03009_ch_T0000561;gene_id=HG03009_ch_G0000199;Parent=HG03009_ch_T0000561;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG03009_ch_T0000561:6;Name=BCORP1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21495940	21496179	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG03009_ch_T0000561;gene_id=HG03009_ch_G0000199;Parent=HG03009_ch_T0000561;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG03009_ch_T0000561:7;Name=BCORP1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21496180	21496674	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG03009_ch_T0000561;gene_id=HG03009_ch_G0000199;Parent=HG03009_ch_T0000561;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG03009_ch_T0000561:7;Name=BCORP1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21496675	21496938	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG03009_ch_T0000561;gene_id=HG03009_ch_G0000199;Parent=HG03009_ch_T0000561;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG03009_ch_T0000561:8;Name=BCORP1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21496939	21502204	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG03009_ch_T0000561;gene_id=HG03009_ch_G0000199;Parent=HG03009_ch_T0000561;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG03009_ch_T0000561:8;Name=BCORP1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21502205	21502330	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG03009_ch_T0000561;gene_id=HG03009_ch_G0000199;Parent=HG03009_ch_T0000561;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG03009_ch_T0000561:9;Name=BCORP1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21502331	21525067	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG03009_ch_T0000561;gene_id=HG03009_ch_G0000199;Parent=HG03009_ch_T0000561;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG03009_ch_T0000561:9;Name=BCORP1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21525068	21525189	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG03009_ch_T0000561;gene_id=HG03009_ch_G0000199;Parent=HG03009_ch_T0000561;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG03009_ch_T0000561:10;Name=BCORP1;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	21503652	21505491	.	-	.	source_gene_common_name=LOC102723934;source_gene=hg002_chrY_paternal_432;alternative_source_transcripts=hg002_chrY_paternal_432.1,hg002_chrY_paternal_432.1;gene_id=HG03009_ch_G0000200;gene_biotype=protein_coding;gene_name=LOC102723934;gene_sources=liftoff,augTM;ID=HG03009_ch_G0000200;Name=LOC102723934
HG03009_chrY	CAT	transcript	21503652	21505491	100	-	.	source_transcript=hg002_chrY_paternal_432.1;source_transcript_name=hg002_chrY_paternal_432.1;source_gene=hg002_chrY_paternal_432;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_432;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_432.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_432.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723934;alternative_source_transcripts=hg002_chrY_paternal_432.1,hg002_chrY_paternal_432.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000562;gene_id=HG03009_ch_G0000200;Parent=HG03009_ch_G0000200;transcript_name=hg002_chrY_paternal_432.1;gene_name=LOC102723934;ID=HG03009_ch_T0000562;Name=LOC102723934
HG03009_chrY	CAT	exon	21503652	21504040	.	-	.	source_transcript=hg002_chrY_paternal_432.1;source_transcript_name=hg002_chrY_paternal_432.1;source_gene=hg002_chrY_paternal_432;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_432;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_432.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_432.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723934;alternative_source_transcripts=hg002_chrY_paternal_432.1,hg002_chrY_paternal_432.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000562;gene_id=HG03009_ch_G0000200;Parent=HG03009_ch_T0000562;transcript_name=hg002_chrY_paternal_432.1;gene_name=LOC102723934;ID=exon:HG03009_ch_T0000562:0;Name=LOC102723934;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21503652	21504040	.	-	2	source_transcript=hg002_chrY_paternal_432.1;source_transcript_name=hg002_chrY_paternal_432.1;source_gene=hg002_chrY_paternal_432;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_432;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_432.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_432.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723934;alternative_source_transcripts=hg002_chrY_paternal_432.1,hg002_chrY_paternal_432.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000562;gene_id=HG03009_ch_G0000200;Parent=HG03009_ch_T0000562;transcript_name=hg002_chrY_paternal_432.1;gene_name=LOC102723934;ID=CDS:HG03009_ch_T0000562:0;Name=LOC102723934;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	21503652	21503654	.	-	0	source_transcript=hg002_chrY_paternal_432.1;source_transcript_name=hg002_chrY_paternal_432.1;source_gene=hg002_chrY_paternal_432;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_432;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_432.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_432.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723934;alternative_source_transcripts=hg002_chrY_paternal_432.1,hg002_chrY_paternal_432.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000562;gene_id=HG03009_ch_G0000200;Parent=HG03009_ch_T0000562;transcript_name=hg002_chrY_paternal_432.1;gene_name=LOC102723934;ID=stop_codon:HG03009_ch_T0000562;Name=LOC102723934;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21504041	21504352	.	-	.	source_transcript=hg002_chrY_paternal_432.1;source_transcript_name=hg002_chrY_paternal_432.1;source_gene=hg002_chrY_paternal_432;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_432;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_432.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_432.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723934;alternative_source_transcripts=hg002_chrY_paternal_432.1,hg002_chrY_paternal_432.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000562;gene_id=HG03009_ch_G0000200;Parent=HG03009_ch_T0000562;transcript_name=hg002_chrY_paternal_432.1;gene_name=LOC102723934;ID=intron:HG03009_ch_T0000562:0;Name=LOC102723934;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21504353	21504364	.	-	.	source_transcript=hg002_chrY_paternal_432.1;source_transcript_name=hg002_chrY_paternal_432.1;source_gene=hg002_chrY_paternal_432;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_432;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_432.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_432.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723934;alternative_source_transcripts=hg002_chrY_paternal_432.1,hg002_chrY_paternal_432.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000562;gene_id=HG03009_ch_G0000200;Parent=HG03009_ch_T0000562;transcript_name=hg002_chrY_paternal_432.1;gene_name=LOC102723934;ID=exon:HG03009_ch_T0000562:1;Name=LOC102723934;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21504353	21504364	.	-	2	source_transcript=hg002_chrY_paternal_432.1;source_transcript_name=hg002_chrY_paternal_432.1;source_gene=hg002_chrY_paternal_432;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_432;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_432.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_432.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723934;alternative_source_transcripts=hg002_chrY_paternal_432.1,hg002_chrY_paternal_432.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000562;gene_id=HG03009_ch_G0000200;Parent=HG03009_ch_T0000562;transcript_name=hg002_chrY_paternal_432.1;gene_name=LOC102723934;ID=CDS:HG03009_ch_T0000562:1;Name=LOC102723934;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21504365	21504444	.	-	.	source_transcript=hg002_chrY_paternal_432.1;source_transcript_name=hg002_chrY_paternal_432.1;source_gene=hg002_chrY_paternal_432;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_432;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_432.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_432.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723934;alternative_source_transcripts=hg002_chrY_paternal_432.1,hg002_chrY_paternal_432.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000562;gene_id=HG03009_ch_G0000200;Parent=HG03009_ch_T0000562;transcript_name=hg002_chrY_paternal_432.1;gene_name=LOC102723934;ID=intron:HG03009_ch_T0000562:1;Name=LOC102723934;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21504445	21505491	.	-	.	source_transcript=hg002_chrY_paternal_432.1;source_transcript_name=hg002_chrY_paternal_432.1;source_gene=hg002_chrY_paternal_432;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_432;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_432.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_432.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723934;alternative_source_transcripts=hg002_chrY_paternal_432.1,hg002_chrY_paternal_432.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000562;gene_id=HG03009_ch_G0000200;Parent=HG03009_ch_T0000562;transcript_name=hg002_chrY_paternal_432.1;gene_name=LOC102723934;ID=exon:HG03009_ch_T0000562:2;Name=LOC102723934;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21504445	21505468	.	-	0	source_transcript=hg002_chrY_paternal_432.1;source_transcript_name=hg002_chrY_paternal_432.1;source_gene=hg002_chrY_paternal_432;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_432;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_432.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_432.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723934;alternative_source_transcripts=hg002_chrY_paternal_432.1,hg002_chrY_paternal_432.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000562;gene_id=HG03009_ch_G0000200;Parent=HG03009_ch_T0000562;transcript_name=hg002_chrY_paternal_432.1;gene_name=LOC102723934;ID=CDS:HG03009_ch_T0000562:2;Name=LOC102723934;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	21505466	21505468	.	-	0	source_transcript=hg002_chrY_paternal_432.1;source_transcript_name=hg002_chrY_paternal_432.1;source_gene=hg002_chrY_paternal_432;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_432;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_432.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_432.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723934;alternative_source_transcripts=hg002_chrY_paternal_432.1,hg002_chrY_paternal_432.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000562;gene_id=HG03009_ch_G0000200;Parent=HG03009_ch_T0000562;transcript_name=hg002_chrY_paternal_432.1;gene_name=LOC102723934;ID=start_codon:HG03009_ch_T0000562;Name=LOC102723934;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	21575922	21589033	.	-	.	source_gene_common_name=LOC105377223;source_gene=hg002_chrY_paternal_433;alternative_source_transcripts=hg002_chrY_paternal_433.1,hg002_chrY_paternal_433.1;gene_id=HG03009_ch_G0000201;gene_biotype=lncRNA;gene_name=LOC105377223;gene_sources=liftoff;ID=HG03009_ch_G0000201;Name=LOC105377223
HG03009_chrY	CAT	transcript	21575922	21589033	1000	-	.	source_transcript=hg002_chrY_paternal_433.1;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.1,hg002_chrY_paternal_433.1;transcript_id=HG03009_ch_T0000563;gene_id=HG03009_ch_G0000201;Parent=HG03009_ch_G0000201;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=HG03009_ch_T0000563;Name=LOC105377223
HG03009_chrY	CAT	exon	21575922	21578836	.	-	.	source_transcript=hg002_chrY_paternal_433.1;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.1,hg002_chrY_paternal_433.1;transcript_id=HG03009_ch_T0000563;gene_id=HG03009_ch_G0000201;Parent=HG03009_ch_T0000563;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG03009_ch_T0000563:0;Name=LOC105377223;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21578837	21579253	.	-	.	source_transcript=hg002_chrY_paternal_433.1;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.1,hg002_chrY_paternal_433.1;transcript_id=HG03009_ch_T0000563;gene_id=HG03009_ch_G0000201;Parent=HG03009_ch_T0000563;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG03009_ch_T0000563:0;Name=LOC105377223;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21579254	21579313	.	-	.	source_transcript=hg002_chrY_paternal_433.1;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.1,hg002_chrY_paternal_433.1;transcript_id=HG03009_ch_T0000563;gene_id=HG03009_ch_G0000201;Parent=HG03009_ch_T0000563;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG03009_ch_T0000563:1;Name=LOC105377223;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21579314	21580047	.	-	.	source_transcript=hg002_chrY_paternal_433.1;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.1,hg002_chrY_paternal_433.1;transcript_id=HG03009_ch_T0000563;gene_id=HG03009_ch_G0000201;Parent=HG03009_ch_T0000563;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG03009_ch_T0000563:1;Name=LOC105377223;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21580048	21580164	.	-	.	source_transcript=hg002_chrY_paternal_433.1;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.1,hg002_chrY_paternal_433.1;transcript_id=HG03009_ch_T0000563;gene_id=HG03009_ch_G0000201;Parent=HG03009_ch_T0000563;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG03009_ch_T0000563:2;Name=LOC105377223;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21580165	21589005	.	-	.	source_transcript=hg002_chrY_paternal_433.1;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.1,hg002_chrY_paternal_433.1;transcript_id=HG03009_ch_T0000563;gene_id=HG03009_ch_G0000201;Parent=HG03009_ch_T0000563;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG03009_ch_T0000563:2;Name=LOC105377223;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21589006	21589033	.	-	.	source_transcript=hg002_chrY_paternal_433.1;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.1,hg002_chrY_paternal_433.1;transcript_id=HG03009_ch_T0000563;gene_id=HG03009_ch_G0000201;Parent=HG03009_ch_T0000563;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG03009_ch_T0000563:3;Name=LOC105377223;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	21575922	21589033	1000	-	.	source_transcript=hg002_chrY_paternal_433.2;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.2,hg002_chrY_paternal_433.2;transcript_id=HG03009_ch_T0000564;gene_id=HG03009_ch_G0000201;Parent=HG03009_ch_G0000201;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=HG03009_ch_T0000564;Name=LOC105377223
HG03009_chrY	CAT	exon	21575922	21578836	.	-	.	source_transcript=hg002_chrY_paternal_433.2;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.2,hg002_chrY_paternal_433.2;transcript_id=HG03009_ch_T0000564;gene_id=HG03009_ch_G0000201;Parent=HG03009_ch_T0000564;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG03009_ch_T0000564:0;Name=LOC105377223;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21578837	21579253	.	-	.	source_transcript=hg002_chrY_paternal_433.2;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.2,hg002_chrY_paternal_433.2;transcript_id=HG03009_ch_T0000564;gene_id=HG03009_ch_G0000201;Parent=HG03009_ch_T0000564;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG03009_ch_T0000564:0;Name=LOC105377223;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21579254	21579313	.	-	.	source_transcript=hg002_chrY_paternal_433.2;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.2,hg002_chrY_paternal_433.2;transcript_id=HG03009_ch_T0000564;gene_id=HG03009_ch_G0000201;Parent=HG03009_ch_T0000564;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG03009_ch_T0000564:1;Name=LOC105377223;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21579314	21580063	.	-	.	source_transcript=hg002_chrY_paternal_433.2;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.2,hg002_chrY_paternal_433.2;transcript_id=HG03009_ch_T0000564;gene_id=HG03009_ch_G0000201;Parent=HG03009_ch_T0000564;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG03009_ch_T0000564:1;Name=LOC105377223;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21580064	21580164	.	-	.	source_transcript=hg002_chrY_paternal_433.2;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.2,hg002_chrY_paternal_433.2;transcript_id=HG03009_ch_T0000564;gene_id=HG03009_ch_G0000201;Parent=HG03009_ch_T0000564;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG03009_ch_T0000564:2;Name=LOC105377223;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21580165	21589005	.	-	.	source_transcript=hg002_chrY_paternal_433.2;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.2,hg002_chrY_paternal_433.2;transcript_id=HG03009_ch_T0000564;gene_id=HG03009_ch_G0000201;Parent=HG03009_ch_T0000564;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG03009_ch_T0000564:2;Name=LOC105377223;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21589006	21589033	.	-	.	source_transcript=hg002_chrY_paternal_433.2;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.2,hg002_chrY_paternal_433.2;transcript_id=HG03009_ch_T0000564;gene_id=HG03009_ch_G0000201;Parent=HG03009_ch_T0000564;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG03009_ch_T0000564:3;Name=LOC105377223;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	21575922	21589033	1000	-	.	source_transcript=hg002_chrY_paternal_433.3;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.3,hg002_chrY_paternal_433.3;transcript_id=HG03009_ch_T0000565;gene_id=HG03009_ch_G0000201;Parent=HG03009_ch_G0000201;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=HG03009_ch_T0000565;Name=LOC105377223
HG03009_chrY	CAT	exon	21575922	21578836	.	-	.	source_transcript=hg002_chrY_paternal_433.3;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.3,hg002_chrY_paternal_433.3;transcript_id=HG03009_ch_T0000565;gene_id=HG03009_ch_G0000201;Parent=HG03009_ch_T0000565;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG03009_ch_T0000565:0;Name=LOC105377223;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21578837	21579253	.	-	.	source_transcript=hg002_chrY_paternal_433.3;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.3,hg002_chrY_paternal_433.3;transcript_id=HG03009_ch_T0000565;gene_id=HG03009_ch_G0000201;Parent=HG03009_ch_T0000565;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG03009_ch_T0000565:0;Name=LOC105377223;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21579254	21579313	.	-	.	source_transcript=hg002_chrY_paternal_433.3;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.3,hg002_chrY_paternal_433.3;transcript_id=HG03009_ch_T0000565;gene_id=HG03009_ch_G0000201;Parent=HG03009_ch_T0000565;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG03009_ch_T0000565:1;Name=LOC105377223;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21579314	21580047	.	-	.	source_transcript=hg002_chrY_paternal_433.3;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.3,hg002_chrY_paternal_433.3;transcript_id=HG03009_ch_T0000565;gene_id=HG03009_ch_G0000201;Parent=HG03009_ch_T0000565;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG03009_ch_T0000565:1;Name=LOC105377223;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21580048	21580164	.	-	.	source_transcript=hg002_chrY_paternal_433.3;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.3,hg002_chrY_paternal_433.3;transcript_id=HG03009_ch_T0000565;gene_id=HG03009_ch_G0000201;Parent=HG03009_ch_T0000565;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG03009_ch_T0000565:2;Name=LOC105377223;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21580165	21581363	.	-	.	source_transcript=hg002_chrY_paternal_433.3;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.3,hg002_chrY_paternal_433.3;transcript_id=HG03009_ch_T0000565;gene_id=HG03009_ch_G0000201;Parent=HG03009_ch_T0000565;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG03009_ch_T0000565:2;Name=LOC105377223;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21581364	21589033	.	-	.	source_transcript=hg002_chrY_paternal_433.3;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.3,hg002_chrY_paternal_433.3;transcript_id=HG03009_ch_T0000565;gene_id=HG03009_ch_G0000201;Parent=HG03009_ch_T0000565;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG03009_ch_T0000565:3;Name=LOC105377223;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	21575922	21589033	1000	-	.	source_transcript=hg002_chrY_paternal_433.4;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.4,hg002_chrY_paternal_433.4;transcript_id=HG03009_ch_T0000566;gene_id=HG03009_ch_G0000201;Parent=HG03009_ch_G0000201;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=HG03009_ch_T0000566;Name=LOC105377223
HG03009_chrY	CAT	exon	21575922	21577578	.	-	.	source_transcript=hg002_chrY_paternal_433.4;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.4,hg002_chrY_paternal_433.4;transcript_id=HG03009_ch_T0000566;gene_id=HG03009_ch_G0000201;Parent=HG03009_ch_T0000566;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG03009_ch_T0000566:0;Name=LOC105377223;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21577579	21579253	.	-	.	source_transcript=hg002_chrY_paternal_433.4;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.4,hg002_chrY_paternal_433.4;transcript_id=HG03009_ch_T0000566;gene_id=HG03009_ch_G0000201;Parent=HG03009_ch_T0000566;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG03009_ch_T0000566:0;Name=LOC105377223;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21579254	21579313	.	-	.	source_transcript=hg002_chrY_paternal_433.4;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.4,hg002_chrY_paternal_433.4;transcript_id=HG03009_ch_T0000566;gene_id=HG03009_ch_G0000201;Parent=HG03009_ch_T0000566;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG03009_ch_T0000566:1;Name=LOC105377223;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21579314	21580063	.	-	.	source_transcript=hg002_chrY_paternal_433.4;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.4,hg002_chrY_paternal_433.4;transcript_id=HG03009_ch_T0000566;gene_id=HG03009_ch_G0000201;Parent=HG03009_ch_T0000566;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG03009_ch_T0000566:1;Name=LOC105377223;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21580064	21580164	.	-	.	source_transcript=hg002_chrY_paternal_433.4;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.4,hg002_chrY_paternal_433.4;transcript_id=HG03009_ch_T0000566;gene_id=HG03009_ch_G0000201;Parent=HG03009_ch_T0000566;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG03009_ch_T0000566:2;Name=LOC105377223;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21580165	21581363	.	-	.	source_transcript=hg002_chrY_paternal_433.4;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.4,hg002_chrY_paternal_433.4;transcript_id=HG03009_ch_T0000566;gene_id=HG03009_ch_G0000201;Parent=HG03009_ch_T0000566;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG03009_ch_T0000566:2;Name=LOC105377223;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21581364	21589033	.	-	.	source_transcript=hg002_chrY_paternal_433.4;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.4,hg002_chrY_paternal_433.4;transcript_id=HG03009_ch_T0000566;gene_id=HG03009_ch_G0000201;Parent=HG03009_ch_T0000566;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG03009_ch_T0000566:3;Name=LOC105377223;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	21575922	21589033	1000	-	.	source_transcript=hg002_chrY_paternal_433.5;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.5,hg002_chrY_paternal_433.5;transcript_id=HG03009_ch_T0000567;gene_id=HG03009_ch_G0000201;Parent=HG03009_ch_G0000201;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=HG03009_ch_T0000567;Name=LOC105377223
HG03009_chrY	CAT	exon	21575922	21577578	.	-	.	source_transcript=hg002_chrY_paternal_433.5;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.5,hg002_chrY_paternal_433.5;transcript_id=HG03009_ch_T0000567;gene_id=HG03009_ch_G0000201;Parent=HG03009_ch_T0000567;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG03009_ch_T0000567:0;Name=LOC105377223;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21577579	21579253	.	-	.	source_transcript=hg002_chrY_paternal_433.5;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.5,hg002_chrY_paternal_433.5;transcript_id=HG03009_ch_T0000567;gene_id=HG03009_ch_G0000201;Parent=HG03009_ch_T0000567;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG03009_ch_T0000567:0;Name=LOC105377223;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21579254	21579313	.	-	.	source_transcript=hg002_chrY_paternal_433.5;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.5,hg002_chrY_paternal_433.5;transcript_id=HG03009_ch_T0000567;gene_id=HG03009_ch_G0000201;Parent=HG03009_ch_T0000567;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG03009_ch_T0000567:1;Name=LOC105377223;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21579314	21580047	.	-	.	source_transcript=hg002_chrY_paternal_433.5;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.5,hg002_chrY_paternal_433.5;transcript_id=HG03009_ch_T0000567;gene_id=HG03009_ch_G0000201;Parent=HG03009_ch_T0000567;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG03009_ch_T0000567:1;Name=LOC105377223;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21580048	21580164	.	-	.	source_transcript=hg002_chrY_paternal_433.5;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.5,hg002_chrY_paternal_433.5;transcript_id=HG03009_ch_T0000567;gene_id=HG03009_ch_G0000201;Parent=HG03009_ch_T0000567;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG03009_ch_T0000567:2;Name=LOC105377223;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21580165	21589005	.	-	.	source_transcript=hg002_chrY_paternal_433.5;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.5,hg002_chrY_paternal_433.5;transcript_id=HG03009_ch_T0000567;gene_id=HG03009_ch_G0000201;Parent=HG03009_ch_T0000567;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG03009_ch_T0000567:2;Name=LOC105377223;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21589006	21589033	.	-	.	source_transcript=hg002_chrY_paternal_433.5;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.5,hg002_chrY_paternal_433.5;transcript_id=HG03009_ch_T0000567;gene_id=HG03009_ch_G0000201;Parent=HG03009_ch_T0000567;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG03009_ch_T0000567:3;Name=LOC105377223;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	21575922	21589033	1000	-	.	source_transcript=hg002_chrY_paternal_433.6;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.6;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.6,hg002_chrY_paternal_433.6;transcript_id=HG03009_ch_T0000568;gene_id=HG03009_ch_G0000201;Parent=HG03009_ch_G0000201;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=HG03009_ch_T0000568;Name=LOC105377223
HG03009_chrY	CAT	exon	21575922	21579313	.	-	.	source_transcript=hg002_chrY_paternal_433.6;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.6,hg002_chrY_paternal_433.6;transcript_id=HG03009_ch_T0000568;gene_id=HG03009_ch_G0000201;Parent=HG03009_ch_T0000568;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG03009_ch_T0000568:0;Name=LOC105377223;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21579314	21580047	.	-	.	source_transcript=hg002_chrY_paternal_433.6;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.6,hg002_chrY_paternal_433.6;transcript_id=HG03009_ch_T0000568;gene_id=HG03009_ch_G0000201;Parent=HG03009_ch_T0000568;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG03009_ch_T0000568:0;Name=LOC105377223;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21580048	21580164	.	-	.	source_transcript=hg002_chrY_paternal_433.6;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.6,hg002_chrY_paternal_433.6;transcript_id=HG03009_ch_T0000568;gene_id=HG03009_ch_G0000201;Parent=HG03009_ch_T0000568;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG03009_ch_T0000568:1;Name=LOC105377223;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21580165	21581363	.	-	.	source_transcript=hg002_chrY_paternal_433.6;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.6,hg002_chrY_paternal_433.6;transcript_id=HG03009_ch_T0000568;gene_id=HG03009_ch_G0000201;Parent=HG03009_ch_T0000568;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG03009_ch_T0000568:1;Name=LOC105377223;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21581364	21589033	.	-	.	source_transcript=hg002_chrY_paternal_433.6;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.6,hg002_chrY_paternal_433.6;transcript_id=HG03009_ch_T0000568;gene_id=HG03009_ch_G0000201;Parent=HG03009_ch_T0000568;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG03009_ch_T0000568:2;Name=LOC105377223;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	21575922	21589033	1000	-	.	source_transcript=hg002_chrY_paternal_433.7;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.7;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.7,hg002_chrY_paternal_433.7;transcript_id=HG03009_ch_T0000569;gene_id=HG03009_ch_G0000201;Parent=HG03009_ch_G0000201;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=HG03009_ch_T0000569;Name=LOC105377223
HG03009_chrY	CAT	exon	21575922	21579313	.	-	.	source_transcript=hg002_chrY_paternal_433.7;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.7,hg002_chrY_paternal_433.7;transcript_id=HG03009_ch_T0000569;gene_id=HG03009_ch_G0000201;Parent=HG03009_ch_T0000569;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG03009_ch_T0000569:0;Name=LOC105377223;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21579314	21580047	.	-	.	source_transcript=hg002_chrY_paternal_433.7;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.7,hg002_chrY_paternal_433.7;transcript_id=HG03009_ch_T0000569;gene_id=HG03009_ch_G0000201;Parent=HG03009_ch_T0000569;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG03009_ch_T0000569:0;Name=LOC105377223;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21580048	21580164	.	-	.	source_transcript=hg002_chrY_paternal_433.7;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.7,hg002_chrY_paternal_433.7;transcript_id=HG03009_ch_T0000569;gene_id=HG03009_ch_G0000201;Parent=HG03009_ch_T0000569;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG03009_ch_T0000569:1;Name=LOC105377223;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21580165	21589005	.	-	.	source_transcript=hg002_chrY_paternal_433.7;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.7,hg002_chrY_paternal_433.7;transcript_id=HG03009_ch_T0000569;gene_id=HG03009_ch_G0000201;Parent=HG03009_ch_T0000569;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG03009_ch_T0000569:1;Name=LOC105377223;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21589006	21589033	.	-	.	source_transcript=hg002_chrY_paternal_433.7;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.7,hg002_chrY_paternal_433.7;transcript_id=HG03009_ch_T0000569;gene_id=HG03009_ch_G0000201;Parent=HG03009_ch_T0000569;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG03009_ch_T0000569:2;Name=LOC105377223;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	21589382	21629209	.	+	.	source_gene_common_name=TXLNGY;source_gene=hg002_chrY_paternal_434;alternative_source_transcripts=hg002_chrY_paternal_434.1,hg002_chrY_paternal_434.1;gene_id=HG03009_ch_G0000202;gene_biotype=transcribed_pseudogene;gene_name=TXLNGY;gene_sources=liftoff;ID=HG03009_ch_G0000202;Name=TXLNGY
HG03009_chrY	CAT	transcript	21589382	21612447	1000	+	.	source_transcript=hg002_chrY_paternal_434.1;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.1,hg002_chrY_paternal_434.1;transcript_id=HG03009_ch_T0000570;gene_id=HG03009_ch_G0000202;Parent=HG03009_ch_G0000202;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=HG03009_ch_T0000570;Name=TXLNGY
HG03009_chrY	CAT	exon	21589382	21589506	.	+	.	source_transcript=hg002_chrY_paternal_434.1;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.1,hg002_chrY_paternal_434.1;transcript_id=HG03009_ch_T0000570;gene_id=HG03009_ch_G0000202;Parent=HG03009_ch_T0000570;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:HG03009_ch_T0000570:0;Name=TXLNGY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21589507	21609233	.	+	.	source_transcript=hg002_chrY_paternal_434.1;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.1,hg002_chrY_paternal_434.1;transcript_id=HG03009_ch_T0000570;gene_id=HG03009_ch_G0000202;Parent=HG03009_ch_T0000570;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=intron:HG03009_ch_T0000570:0;Name=TXLNGY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21609234	21609531	.	+	.	source_transcript=hg002_chrY_paternal_434.1;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.1,hg002_chrY_paternal_434.1;transcript_id=HG03009_ch_T0000570;gene_id=HG03009_ch_G0000202;Parent=HG03009_ch_T0000570;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:HG03009_ch_T0000570:1;Name=TXLNGY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21609532	21611544	.	+	.	source_transcript=hg002_chrY_paternal_434.1;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.1,hg002_chrY_paternal_434.1;transcript_id=HG03009_ch_T0000570;gene_id=HG03009_ch_G0000202;Parent=HG03009_ch_T0000570;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=intron:HG03009_ch_T0000570:1;Name=TXLNGY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21611545	21611636	.	+	.	source_transcript=hg002_chrY_paternal_434.1;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.1,hg002_chrY_paternal_434.1;transcript_id=HG03009_ch_T0000570;gene_id=HG03009_ch_G0000202;Parent=HG03009_ch_T0000570;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:HG03009_ch_T0000570:2;Name=TXLNGY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21611637	21612106	.	+	.	source_transcript=hg002_chrY_paternal_434.1;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.1,hg002_chrY_paternal_434.1;transcript_id=HG03009_ch_T0000570;gene_id=HG03009_ch_G0000202;Parent=HG03009_ch_T0000570;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=intron:HG03009_ch_T0000570:2;Name=TXLNGY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21612107	21612447	.	+	.	source_transcript=hg002_chrY_paternal_434.1;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.1,hg002_chrY_paternal_434.1;transcript_id=HG03009_ch_T0000570;gene_id=HG03009_ch_G0000202;Parent=HG03009_ch_T0000570;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:HG03009_ch_T0000570:3;Name=TXLNGY;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	21589382	21629209	1000	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG03009_ch_T0000571;gene_id=HG03009_ch_G0000202;Parent=HG03009_ch_G0000202;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=HG03009_ch_T0000571;Name=TXLNGY
HG03009_chrY	CAT	exon	21589382	21589506	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG03009_ch_T0000571;gene_id=HG03009_ch_G0000202;Parent=HG03009_ch_T0000571;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:HG03009_ch_T0000571:0;Name=TXLNGY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21589507	21609233	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG03009_ch_T0000571;gene_id=HG03009_ch_G0000202;Parent=HG03009_ch_T0000571;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=intron:HG03009_ch_T0000571:0;Name=TXLNGY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21609234	21609531	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG03009_ch_T0000571;gene_id=HG03009_ch_G0000202;Parent=HG03009_ch_T0000571;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:HG03009_ch_T0000571:1;Name=TXLNGY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21609532	21611544	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG03009_ch_T0000571;gene_id=HG03009_ch_G0000202;Parent=HG03009_ch_T0000571;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=intron:HG03009_ch_T0000571:1;Name=TXLNGY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21611545	21611636	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG03009_ch_T0000571;gene_id=HG03009_ch_G0000202;Parent=HG03009_ch_T0000571;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:HG03009_ch_T0000571:2;Name=TXLNGY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21611637	21613803	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG03009_ch_T0000571;gene_id=HG03009_ch_G0000202;Parent=HG03009_ch_T0000571;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=intron:HG03009_ch_T0000571:2;Name=TXLNGY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21613804	21613983	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG03009_ch_T0000571;gene_id=HG03009_ch_G0000202;Parent=HG03009_ch_T0000571;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:HG03009_ch_T0000571:3;Name=TXLNGY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21613984	21615422	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG03009_ch_T0000571;gene_id=HG03009_ch_G0000202;Parent=HG03009_ch_T0000571;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=intron:HG03009_ch_T0000571:3;Name=TXLNGY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21615423	21615617	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG03009_ch_T0000571;gene_id=HG03009_ch_G0000202;Parent=HG03009_ch_T0000571;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:HG03009_ch_T0000571:4;Name=TXLNGY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21615618	21618038	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG03009_ch_T0000571;gene_id=HG03009_ch_G0000202;Parent=HG03009_ch_T0000571;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=intron:HG03009_ch_T0000571:4;Name=TXLNGY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21618039	21618158	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG03009_ch_T0000571;gene_id=HG03009_ch_G0000202;Parent=HG03009_ch_T0000571;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:HG03009_ch_T0000571:5;Name=TXLNGY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21618159	21619618	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG03009_ch_T0000571;gene_id=HG03009_ch_G0000202;Parent=HG03009_ch_T0000571;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=intron:HG03009_ch_T0000571:5;Name=TXLNGY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21619619	21619693	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG03009_ch_T0000571;gene_id=HG03009_ch_G0000202;Parent=HG03009_ch_T0000571;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:HG03009_ch_T0000571:6;Name=TXLNGY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21619694	21621767	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG03009_ch_T0000571;gene_id=HG03009_ch_G0000202;Parent=HG03009_ch_T0000571;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=intron:HG03009_ch_T0000571:6;Name=TXLNGY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21621768	21621860	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG03009_ch_T0000571;gene_id=HG03009_ch_G0000202;Parent=HG03009_ch_T0000571;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:HG03009_ch_T0000571:7;Name=TXLNGY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21621861	21624244	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG03009_ch_T0000571;gene_id=HG03009_ch_G0000202;Parent=HG03009_ch_T0000571;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=intron:HG03009_ch_T0000571:7;Name=TXLNGY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21624245	21624340	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG03009_ch_T0000571;gene_id=HG03009_ch_G0000202;Parent=HG03009_ch_T0000571;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:HG03009_ch_T0000571:8;Name=TXLNGY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21624341	21625825	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG03009_ch_T0000571;gene_id=HG03009_ch_G0000202;Parent=HG03009_ch_T0000571;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=intron:HG03009_ch_T0000571:8;Name=TXLNGY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21625826	21629209	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG03009_ch_T0000571;gene_id=HG03009_ch_G0000202;Parent=HG03009_ch_T0000571;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:HG03009_ch_T0000571:9;Name=TXLNGY;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	21725899	21766758	.	-	.	source_gene_common_name=KDM5D;source_gene=hg002_chrY_paternal_435;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;gene_id=HG03009_ch_G0000203;gene_biotype=protein_coding;gene_name=KDM5D;gene_sources=liftoff,augTM;ID=HG03009_ch_G0000203;Name=KDM5D
HG03009_chrY	CAT	transcript	21725899	21766758	100	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000572;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_G0000203;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=HG03009_ch_T0000572;Name=KDM5D
HG03009_chrY	CAT	exon	21725899	21728379	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000572;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000572:0;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21728029	21728379	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000572;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000572:0;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	21728029	21728031	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000572;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:HG03009_ch_T0000572;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21728380	21728474	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000572;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000572:0;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21728475	21728674	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000572;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000572:1;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21728475	21728674	.	-	2	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000572;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000572:1;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21728675	21728827	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000572;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000572:1;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21728828	21728897	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000572;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000572:2;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21728828	21728897	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000572;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000572:2;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21728898	21729180	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000572;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000572:2;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21729181	21729780	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000572;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000572:3;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21729181	21729780	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000572;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000572:3;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21729781	21729967	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000572;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000572:3;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21729968	21730105	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000572;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000572:4;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21729968	21730105	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000572;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000572:4;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21730106	21730277	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000572;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000572:4;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21730278	21730457	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000572;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000572:5;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21730278	21730457	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000572;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000572:5;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21730458	21730908	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000572;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000572:5;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21730909	21731047	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000572;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000572:6;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21730909	21731047	.	-	1	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000572;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000572:6;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21731048	21731484	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000572;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000572:6;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21731485	21731843	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000572;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000572:7;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21731485	21731843	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000572;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000572:7;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21731844	21732409	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000572;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000572:7;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21732410	21732506	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000572;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000572:8;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21732410	21732506	.	-	1	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000572;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000572:8;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21732507	21737385	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000572;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000572:8;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21737386	21737533	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000572;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000572:9;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21737386	21737533	.	-	2	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000572;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000572:9;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21737534	21737648	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000572;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000572:9;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21737649	21737773	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000572;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000572:10;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21737649	21737773	.	-	1	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000572;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000572:10;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21737774	21737856	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000572;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000572:10;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21737857	21738038	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000572;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000572:11;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21737857	21738038	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000572;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000572:11;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21738039	21738312	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000572;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000572:11;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21738313	21738507	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000572;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000572:12;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21738313	21738507	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000572;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000572:12;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21738508	21738629	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000572;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000572:12;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21738630	21738749	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000572;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000572:13;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21738630	21738749	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000572;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000572:13;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21738750	21742905	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000572;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000572:13;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21742906	21743068	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000572;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000572:14;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21742906	21743068	.	-	1	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000572;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000572:14;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21743069	21743163	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000572;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000572:14;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21743164	21743345	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000572;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000572:15;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21743164	21743345	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000572;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000572:15;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21743346	21745374	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000572;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000572:15;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21745375	21745467	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000572;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000572:16;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21745375	21745467	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000572;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000572:16;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21745468	21753805	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000572;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000572:16;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21753806	21753964	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000572;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000572:17;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21753806	21753964	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000572;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000572:17;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21753965	21754079	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000572;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000572:17;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21754080	21754199	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000572;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000572:18;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21754080	21754199	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000572;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000572:18;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21754200	21754615	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000572;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000572:18;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21754616	21754774	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000572;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000572:19;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21754616	21754774	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000572;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000572:19;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21754775	21757383	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000572;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000572:19;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21757384	21757529	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000572;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000572:20;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21757384	21757529	.	-	2	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000572;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000572:20;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21757530	21757652	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000572;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000572:20;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21757653	21757782	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000572;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000572:21;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21757653	21757782	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000572;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000572:21;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21757783	21761559	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000572;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000572:21;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21761560	21761694	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000572;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000572:22;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21761560	21761694	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000572;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000572:22;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21761695	21763349	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000572;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000572:22;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21763350	21763520	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000572;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000572:23;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21763350	21763520	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000572;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000572:23;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21763521	21763766	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000572;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000572:23;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21763767	21763889	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000572;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000572:24;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21763767	21763889	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000572;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000572:24;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21763890	21765193	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000572;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000572:24;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21765194	21765271	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000572;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000572:25;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21765194	21765271	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000572;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000572:25;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21765272	21766416	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000572;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000572:25;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21766417	21766585	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000572;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000572:26;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21766417	21766566	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000572;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000572:26;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	21766564	21766566	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000572;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:HG03009_ch_T0000572;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21766586	21766702	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000572;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000572:26;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21766703	21766758	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000572;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000572:27;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	21725899	21766758	100	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000573;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_G0000203;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=HG03009_ch_T0000573;Name=KDM5D
HG03009_chrY	CAT	exon	21725899	21728379	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000573;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000573:0;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21728029	21728379	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000573;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000573:0;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	21728029	21728031	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000573;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:HG03009_ch_T0000573;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21728380	21728474	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000573;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000573:0;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21728475	21728674	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000573;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000573:1;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21728475	21728674	.	-	2	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000573;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000573:1;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21728675	21728827	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000573;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000573:1;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21728828	21728897	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000573;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000573:2;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21728828	21728897	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000573;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000573:2;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21728898	21729180	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000573;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000573:2;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21729181	21729780	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000573;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000573:3;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21729181	21729780	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000573;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000573:3;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21729781	21729967	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000573;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000573:3;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21729968	21730105	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000573;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000573:4;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21729968	21730105	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000573;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000573:4;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21730106	21730355	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000573;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000573:4;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21730356	21730457	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000573;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000573:5;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21730356	21730457	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000573;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000573:5;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21730458	21730908	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000573;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000573:5;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21730909	21731047	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000573;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000573:6;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21730909	21731047	.	-	1	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000573;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000573:6;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21731048	21731484	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000573;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000573:6;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21731485	21731612	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000573;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000573:7;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21731485	21731612	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000573;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000573:7;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21731613	21732409	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000573;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000573:7;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21732410	21732506	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000573;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000573:8;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21732410	21732506	.	-	1	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000573;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000573:8;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21732507	21737385	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000573;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000573:8;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21737386	21737533	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000573;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000573:9;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21737386	21737533	.	-	2	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000573;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000573:9;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21737534	21737648	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000573;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000573:9;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21737649	21737773	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000573;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000573:10;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21737649	21737773	.	-	1	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000573;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000573:10;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21737774	21737856	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000573;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000573:10;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21737857	21738038	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000573;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000573:11;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21737857	21738038	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000573;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000573:11;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21738039	21738312	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000573;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000573:11;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21738313	21738507	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000573;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000573:12;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21738313	21738507	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000573;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000573:12;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21738508	21738629	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000573;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000573:12;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21738630	21738749	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000573;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000573:13;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21738630	21738749	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000573;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000573:13;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21738750	21742905	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000573;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000573:13;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21742906	21743068	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000573;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000573:14;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21742906	21743068	.	-	1	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000573;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000573:14;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21743069	21743163	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000573;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000573:14;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21743164	21743345	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000573;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000573:15;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21743164	21743345	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000573;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000573:15;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21743346	21753805	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000573;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000573:15;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21753806	21753964	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000573;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000573:16;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21753806	21753964	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000573;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000573:16;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21753965	21754079	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000573;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000573:16;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21754080	21754199	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000573;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000573:17;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21754080	21754199	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000573;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000573:17;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21754200	21754615	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000573;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000573:17;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21754616	21754774	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000573;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000573:18;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21754616	21754774	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000573;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000573:18;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21754775	21757383	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000573;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000573:18;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21757384	21757529	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000573;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000573:19;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21757384	21757529	.	-	2	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000573;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000573:19;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21757530	21757652	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000573;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000573:19;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21757653	21757782	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000573;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000573:20;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21757653	21757782	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000573;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000573:20;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21757783	21761559	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000573;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000573:20;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21761560	21761694	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000573;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000573:21;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21761560	21761694	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000573;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000573:21;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21761695	21763349	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000573;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000573:21;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21763350	21763520	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000573;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000573:22;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21763350	21763520	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000573;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000573:22;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21763521	21763766	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000573;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000573:22;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21763767	21763889	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000573;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000573:23;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21763767	21763889	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000573;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000573:23;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21763890	21765193	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000573;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000573:23;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21765194	21765271	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000573;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000573:24;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21765194	21765271	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000573;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000573:24;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21765272	21766416	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000573;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000573:24;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21766417	21766585	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000573;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000573:25;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21766417	21766566	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000573;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000573:25;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	21766564	21766566	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000573;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:HG03009_ch_T0000573;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21766586	21766702	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000573;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000573:25;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21766703	21766758	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000573;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000573:26;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	21725899	21766758	100	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000574;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_G0000203;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=HG03009_ch_T0000574;Name=KDM5D
HG03009_chrY	CAT	exon	21725899	21728379	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000574;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000574:0;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21728029	21728379	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000574;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000574:0;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	21728029	21728031	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000574;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:HG03009_ch_T0000574;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21728380	21728474	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000574;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000574:0;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21728475	21728674	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000574;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000574:1;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21728475	21728674	.	-	2	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000574;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000574:1;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21728675	21728827	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000574;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000574:1;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21728828	21728897	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000574;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000574:2;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21728828	21728897	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000574;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000574:2;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21728898	21729180	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000574;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000574:2;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21729181	21729780	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000574;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000574:3;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21729181	21729780	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000574;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000574:3;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21729781	21729967	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000574;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000574:3;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21729968	21730105	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000574;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000574:4;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21729968	21730105	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000574;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000574:4;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21730106	21730277	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000574;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000574:4;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21730278	21730457	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000574;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000574:5;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21730278	21730457	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000574;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000574:5;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21730458	21730908	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000574;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000574:5;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21730909	21731047	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000574;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000574:6;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21730909	21731047	.	-	1	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000574;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000574:6;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21731048	21731484	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000574;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000574:6;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21731485	21731612	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000574;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000574:7;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21731485	21731612	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000574;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000574:7;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21731613	21732409	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000574;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000574:7;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21732410	21732506	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000574;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000574:8;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21732410	21732506	.	-	1	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000574;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000574:8;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21732507	21737385	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000574;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000574:8;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21737386	21737533	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000574;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000574:9;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21737386	21737533	.	-	2	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000574;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000574:9;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21737534	21737648	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000574;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000574:9;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21737649	21737773	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000574;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000574:10;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21737649	21737773	.	-	1	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000574;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000574:10;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21737774	21737856	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000574;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000574:10;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21737857	21738038	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000574;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000574:11;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21737857	21738038	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000574;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000574:11;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21738039	21738312	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000574;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000574:11;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21738313	21738507	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000574;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000574:12;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21738313	21738507	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000574;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000574:12;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21738508	21738629	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000574;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000574:12;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21738630	21738749	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000574;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000574:13;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21738630	21738749	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000574;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000574:13;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21738750	21742905	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000574;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000574:13;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21742906	21743068	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000574;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000574:14;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21742906	21743068	.	-	1	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000574;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000574:14;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21743069	21743163	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000574;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000574:14;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21743164	21743345	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000574;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000574:15;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21743164	21743345	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000574;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000574:15;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21743346	21753805	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000574;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000574:15;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21753806	21753964	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000574;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000574:16;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21753806	21753964	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000574;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000574:16;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21753965	21754079	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000574;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000574:16;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21754080	21754199	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000574;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000574:17;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21754080	21754199	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000574;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000574:17;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21754200	21754615	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000574;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000574:17;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21754616	21754774	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000574;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000574:18;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21754616	21754774	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000574;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000574:18;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21754775	21757383	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000574;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000574:18;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21757384	21757529	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000574;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000574:19;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21757384	21757529	.	-	2	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000574;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000574:19;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21757530	21757652	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000574;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000574:19;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21757653	21757782	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000574;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000574:20;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21757653	21757782	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000574;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000574:20;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21757783	21763349	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000574;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000574:20;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21763350	21763520	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000574;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000574:21;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21763350	21763520	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000574;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000574:21;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21763521	21763766	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000574;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000574:21;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21763767	21763889	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000574;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000574:22;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21763767	21763889	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000574;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000574:22;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21763890	21765193	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000574;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000574:22;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21765194	21765271	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000574;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000574:23;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21765194	21765271	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000574;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000574:23;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21765272	21766416	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000574;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000574:23;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21766417	21766585	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000574;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000574:24;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21766417	21766566	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000574;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000574:24;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	21766564	21766566	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000574;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:HG03009_ch_T0000574;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21766586	21766702	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000574;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000574:24;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21766703	21766758	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000574;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000574:25;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	21725899	21766758	100	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000575;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_G0000203;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=HG03009_ch_T0000575;Name=KDM5D
HG03009_chrY	CAT	exon	21725899	21728379	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000575;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000575:0;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21728029	21728379	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000575;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000575:0;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	21728029	21728031	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000575;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:HG03009_ch_T0000575;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21728380	21728474	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000575;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000575:0;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21728475	21728674	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000575;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000575:1;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21728475	21728674	.	-	2	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000575;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000575:1;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21728675	21728827	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000575;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000575:1;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21728828	21728897	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000575;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000575:2;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21728828	21728897	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000575;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000575:2;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21728898	21729180	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000575;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000575:2;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21729181	21729780	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000575;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000575:3;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21729181	21729780	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000575;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000575:3;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21729781	21729967	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000575;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000575:3;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21729968	21730105	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000575;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000575:4;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21729968	21730105	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000575;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000575:4;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21730106	21730355	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000575;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000575:4;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21730356	21730457	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000575;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000575:5;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21730356	21730457	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000575;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000575:5;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21730458	21730908	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000575;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000575:5;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21730909	21731047	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000575;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000575:6;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21730909	21731047	.	-	1	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000575;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000575:6;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21731048	21731484	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000575;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000575:6;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21731485	21731612	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000575;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000575:7;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21731485	21731612	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000575;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000575:7;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21731613	21732409	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000575;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000575:7;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21732410	21732506	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000575;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000575:8;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21732410	21732506	.	-	1	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000575;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000575:8;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21732507	21737385	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000575;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000575:8;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21737386	21737533	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000575;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000575:9;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21737386	21737533	.	-	2	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000575;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000575:9;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21737534	21737648	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000575;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000575:9;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21737649	21737773	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000575;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000575:10;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21737649	21737773	.	-	1	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000575;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000575:10;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21737774	21737856	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000575;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000575:10;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21737857	21738038	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000575;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000575:11;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21737857	21738038	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000575;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000575:11;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21738039	21738312	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000575;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000575:11;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21738313	21738507	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000575;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000575:12;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21738313	21738507	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000575;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000575:12;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21738508	21738629	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000575;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000575:12;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21738630	21738749	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000575;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000575:13;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21738630	21738749	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000575;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000575:13;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21738750	21742905	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000575;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000575:13;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21742906	21743068	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000575;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000575:14;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21742906	21743068	.	-	1	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000575;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000575:14;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21743069	21743163	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000575;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000575:14;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21743164	21743345	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000575;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000575:15;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21743164	21743345	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000575;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000575:15;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21743346	21753805	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000575;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000575:15;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21753806	21753964	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000575;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000575:16;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21753806	21753964	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000575;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000575:16;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21753965	21754079	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000575;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000575:16;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21754080	21754199	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000575;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000575:17;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21754080	21754199	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000575;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000575:17;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21754200	21754615	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000575;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000575:17;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21754616	21754774	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000575;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000575:18;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21754616	21754774	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000575;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000575:18;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21754775	21757383	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000575;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000575:18;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21757384	21757529	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000575;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000575:19;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21757384	21757529	.	-	2	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000575;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000575:19;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21757530	21757652	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000575;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000575:19;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21757653	21757782	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000575;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000575:20;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21757653	21757782	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000575;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000575:20;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21757783	21763349	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000575;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000575:20;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21763350	21763520	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000575;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000575:21;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21763350	21763520	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000575;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000575:21;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21763521	21763766	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000575;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000575:21;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21763767	21763889	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000575;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000575:22;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21763767	21763889	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000575;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000575:22;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21763890	21765193	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000575;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000575:22;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21765194	21765271	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000575;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000575:23;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21765194	21765271	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000575;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000575:23;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21765272	21766416	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000575;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000575:23;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21766417	21766585	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000575;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000575:24;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21766417	21766566	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000575;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000575:24;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	21766564	21766566	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000575;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:HG03009_ch_T0000575;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21766586	21766702	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000575;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000575:24;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21766703	21766758	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000575;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000575:25;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	21725899	21766758	100	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000576;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_G0000203;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=HG03009_ch_T0000576;Name=KDM5D
HG03009_chrY	CAT	exon	21725899	21728379	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000576;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000576:0;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21728029	21728379	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000576;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000576:0;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	21728029	21728031	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000576;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:HG03009_ch_T0000576;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21728380	21728474	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000576;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000576:0;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21728475	21728674	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000576;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000576:1;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21728475	21728674	.	-	2	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000576;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000576:1;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21728675	21728827	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000576;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000576:1;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21728828	21728897	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000576;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000576:2;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21728828	21728897	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000576;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000576:2;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21728898	21729180	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000576;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000576:2;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21729181	21729780	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000576;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000576:3;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21729181	21729780	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000576;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000576:3;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21729781	21729967	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000576;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000576:3;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21729968	21730105	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000576;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000576:4;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21729968	21730105	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000576;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000576:4;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21730106	21730277	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000576;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000576:4;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21730278	21730457	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000576;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000576:5;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21730278	21730457	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000576;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000576:5;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21730458	21730908	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000576;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000576:5;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21730909	21731047	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000576;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000576:6;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21730909	21731047	.	-	1	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000576;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000576:6;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21731048	21731484	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000576;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000576:6;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21731485	21731843	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000576;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000576:7;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21731485	21731843	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000576;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000576:7;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21731844	21732409	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000576;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000576:7;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21732410	21732506	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000576;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000576:8;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21732410	21732506	.	-	1	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000576;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000576:8;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21732507	21737385	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000576;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000576:8;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21737386	21737533	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000576;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000576:9;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21737386	21737533	.	-	2	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000576;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000576:9;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21737534	21737648	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000576;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000576:9;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21737649	21737773	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000576;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000576:10;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21737649	21737773	.	-	1	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000576;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000576:10;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21737774	21737856	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000576;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000576:10;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21737857	21738038	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000576;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000576:11;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21737857	21738038	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000576;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000576:11;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21738039	21738312	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000576;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000576:11;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21738313	21738507	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000576;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000576:12;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21738313	21738507	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000576;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000576:12;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21738508	21738629	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000576;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000576:12;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21738630	21738749	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000576;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000576:13;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21738630	21738749	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000576;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000576:13;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21738750	21742905	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000576;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000576:13;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21742906	21743068	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000576;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000576:14;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21742906	21743068	.	-	1	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000576;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000576:14;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21743069	21743163	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000576;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000576:14;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21743164	21743345	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000576;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000576:15;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21743164	21743345	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000576;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000576:15;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21743346	21753805	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000576;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000576:15;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21753806	21753964	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000576;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000576:16;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21753806	21753964	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000576;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000576:16;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21753965	21754079	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000576;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000576:16;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21754080	21754199	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000576;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000576:17;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21754080	21754199	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000576;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000576:17;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21754200	21754615	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000576;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000576:17;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21754616	21754774	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000576;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000576:18;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21754616	21754774	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000576;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000576:18;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21754775	21757383	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000576;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000576:18;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21757384	21757529	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000576;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000576:19;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21757384	21757529	.	-	2	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000576;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000576:19;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21757530	21757652	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000576;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000576:19;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21757653	21757782	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000576;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000576:20;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21757653	21757782	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000576;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000576:20;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21757783	21761559	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000576;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000576:20;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21761560	21761694	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000576;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000576:21;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21761560	21761694	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000576;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000576:21;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21761695	21763766	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000576;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000576:21;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21763767	21763889	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000576;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000576:22;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21763767	21763889	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000576;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000576:22;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21763890	21765193	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000576;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000576:22;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21765194	21765271	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000576;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000576:23;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21765194	21765271	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000576;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000576:23;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21765272	21766416	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000576;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000576:23;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21766417	21766585	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000576;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000576:24;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21766417	21766566	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000576;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000576:24;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	21766564	21766566	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000576;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:HG03009_ch_T0000576;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21766586	21766702	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000576;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000576:24;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21766703	21766758	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000576;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000576:25;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	21725899	21766758	100	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000577;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_G0000203;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=HG03009_ch_T0000577;Name=KDM5D
HG03009_chrY	CAT	exon	21725899	21728379	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000577;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000577:0;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21728029	21728379	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000577;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000577:0;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	21728029	21728031	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000577;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:HG03009_ch_T0000577;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21728380	21728474	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000577;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000577:0;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21728475	21728674	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000577;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000577:1;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21728475	21728674	.	-	2	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000577;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000577:1;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21728675	21728827	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000577;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000577:1;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21728828	21728897	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000577;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000577:2;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21728828	21728897	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000577;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000577:2;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21728898	21729180	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000577;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000577:2;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21729181	21729780	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000577;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000577:3;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21729181	21729780	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000577;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000577:3;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21729781	21729967	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000577;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000577:3;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21729968	21730105	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000577;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000577:4;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21729968	21730105	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000577;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000577:4;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21730106	21730277	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000577;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000577:4;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21730278	21730457	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000577;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000577:5;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21730278	21730457	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000577;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000577:5;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21730458	21730908	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000577;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000577:5;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21730909	21731047	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000577;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000577:6;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21730909	21731047	.	-	1	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000577;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000577:6;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21731048	21731484	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000577;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000577:6;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21731485	21731843	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000577;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000577:7;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21731485	21731843	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000577;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000577:7;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21731844	21732409	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000577;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000577:7;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21732410	21732506	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000577;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000577:8;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21732410	21732506	.	-	1	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000577;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000577:8;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21732507	21737385	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000577;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000577:8;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21737386	21737533	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000577;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000577:9;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21737386	21737533	.	-	2	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000577;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000577:9;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21737534	21737648	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000577;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000577:9;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21737649	21737773	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000577;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000577:10;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21737649	21737773	.	-	1	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000577;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000577:10;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21737774	21737856	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000577;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000577:10;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21737857	21738038	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000577;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000577:11;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21737857	21738038	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000577;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000577:11;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21738039	21738312	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000577;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000577:11;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21738313	21738507	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000577;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000577:12;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21738313	21738507	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000577;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000577:12;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21738508	21738629	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000577;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000577:12;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21738630	21738749	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000577;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000577:13;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21738630	21738749	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000577;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000577:13;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21738750	21742905	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000577;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000577:13;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21742906	21743068	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000577;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000577:14;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21742906	21743068	.	-	1	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000577;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000577:14;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21743069	21743163	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000577;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000577:14;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21743164	21743345	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000577;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000577:15;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21743164	21743345	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000577;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000577:15;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21743346	21753805	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000577;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000577:15;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21753806	21753964	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000577;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000577:16;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21753806	21753964	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000577;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000577:16;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21753965	21754079	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000577;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000577:16;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21754080	21754199	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000577;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000577:17;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21754080	21754199	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000577;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000577:17;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21754200	21754615	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000577;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000577:17;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21754616	21754774	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000577;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000577:18;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21754616	21754774	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000577;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000577:18;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21754775	21757383	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000577;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000577:18;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21757384	21757529	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000577;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000577:19;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21757384	21757529	.	-	2	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000577;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000577:19;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21757530	21757652	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000577;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000577:19;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21757653	21757782	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000577;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000577:20;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21757653	21757782	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000577;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000577:20;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21757783	21761559	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000577;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000577:20;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21761560	21761694	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000577;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000577:21;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21761560	21761694	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000577;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000577:21;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21761695	21763349	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000577;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000577:21;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21763350	21763520	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000577;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000577:22;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21763350	21763520	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000577;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000577:22;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21763521	21763766	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000577;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000577:22;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21763767	21763889	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000577;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000577:23;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21763767	21763889	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000577;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000577:23;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21763890	21765193	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000577;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000577:23;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21765194	21765271	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000577;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000577:24;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21765194	21765271	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000577;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000577:24;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21765272	21766416	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000577;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000577:24;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21766417	21766585	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000577;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000577:25;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21766417	21766566	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000577;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000577:25;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	21766564	21766566	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000577;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:HG03009_ch_T0000577;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21766586	21766702	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000577;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000577:25;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21766703	21766758	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000577;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000577:26;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	21725899	21766758	100	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000578;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_G0000203;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=HG03009_ch_T0000578;Name=KDM5D
HG03009_chrY	CAT	exon	21725899	21728379	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000578;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000578:0;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21728029	21728379	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000578;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000578:0;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	21728029	21728031	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000578;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:HG03009_ch_T0000578;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21728380	21728474	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000578;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000578:0;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21728475	21728674	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000578;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000578:1;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21728475	21728674	.	-	2	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000578;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000578:1;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21728675	21728827	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000578;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000578:1;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21728828	21728897	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000578;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000578:2;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21728828	21728897	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000578;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000578:2;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21728898	21729180	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000578;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000578:2;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21729181	21729780	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000578;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000578:3;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21729181	21729780	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000578;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000578:3;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21729781	21729967	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000578;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000578:3;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21729968	21730105	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000578;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000578:4;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21729968	21730105	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000578;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000578:4;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21730106	21730277	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000578;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000578:4;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21730278	21730457	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000578;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000578:5;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21730278	21730457	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000578;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000578:5;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21730458	21730908	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000578;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000578:5;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21730909	21731047	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000578;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000578:6;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21730909	21731047	.	-	1	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000578;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000578:6;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21731048	21731484	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000578;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000578:6;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21731485	21731843	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000578;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000578:7;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21731485	21731843	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000578;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000578:7;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21731844	21732409	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000578;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000578:7;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21732410	21732506	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000578;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000578:8;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21732410	21732506	.	-	1	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000578;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000578:8;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21732507	21737385	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000578;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000578:8;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21737386	21737533	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000578;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000578:9;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21737386	21737533	.	-	2	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000578;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000578:9;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21737534	21737648	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000578;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000578:9;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21737649	21737773	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000578;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000578:10;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21737649	21737773	.	-	1	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000578;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000578:10;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21737774	21737856	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000578;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000578:10;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21737857	21738038	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000578;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000578:11;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21737857	21738038	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000578;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000578:11;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21738039	21738312	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000578;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000578:11;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21738313	21738507	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000578;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000578:12;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21738313	21738507	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000578;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000578:12;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21738508	21738629	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000578;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000578:12;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21738630	21738749	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000578;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000578:13;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21738630	21738749	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000578;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000578:13;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21738750	21742905	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000578;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000578:13;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21742906	21743068	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000578;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000578:14;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21742906	21743068	.	-	1	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000578;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000578:14;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21743069	21743163	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000578;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000578:14;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21743164	21743345	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000578;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000578:15;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21743164	21743345	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000578;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000578:15;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21743346	21753805	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000578;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000578:15;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21753806	21753964	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000578;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000578:16;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21753806	21753964	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000578;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000578:16;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21753965	21754079	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000578;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000578:16;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21754080	21754199	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000578;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000578:17;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21754080	21754199	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000578;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000578:17;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21754200	21754615	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000578;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000578:17;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21754616	21754774	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000578;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000578:18;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21754616	21754774	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000578;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000578:18;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21754775	21757383	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000578;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000578:18;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21757384	21757529	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000578;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000578:19;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21757384	21757529	.	-	2	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000578;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000578:19;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21757530	21757652	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000578;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000578:19;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21757653	21757782	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000578;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000578:20;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21757653	21757782	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000578;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000578:20;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21757783	21763349	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000578;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000578:20;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21763350	21763520	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000578;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000578:21;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21763350	21763520	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000578;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000578:21;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21763521	21763766	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000578;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000578:21;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21763767	21763889	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000578;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000578:22;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21763767	21763889	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000578;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000578:22;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21763890	21765193	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000578;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000578:22;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21765194	21765271	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000578;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000578:23;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21765194	21765271	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000578;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000578:23;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21765272	21766416	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000578;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000578:23;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21766417	21766585	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000578;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000578:24;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21766417	21766566	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000578;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000578:24;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	21766564	21766566	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000578;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:HG03009_ch_T0000578;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21766586	21766702	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000578;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000578:24;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21766703	21766758	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000578;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000578:25;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	21725899	21766758	100	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000579;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_G0000203;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=HG03009_ch_T0000579;Name=KDM5D
HG03009_chrY	CAT	exon	21725899	21728379	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000579;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000579:0;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21728029	21728379	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000579;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000579:0;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	21728029	21728031	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000579;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:HG03009_ch_T0000579;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21728380	21728474	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000579;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000579:0;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21728475	21728674	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000579;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000579:1;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21728475	21728674	.	-	2	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000579;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000579:1;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21728675	21728827	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000579;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000579:1;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21728828	21728897	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000579;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000579:2;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21728828	21728897	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000579;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000579:2;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21728898	21729180	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000579;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000579:2;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21729181	21729780	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000579;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000579:3;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21729181	21729780	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000579;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000579:3;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21729781	21729967	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000579;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000579:3;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21729968	21730105	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000579;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000579:4;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21729968	21730105	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000579;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000579:4;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21730106	21730277	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000579;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000579:4;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21730278	21730457	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000579;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000579:5;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21730278	21730457	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000579;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000579:5;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21730458	21730908	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000579;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000579:5;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21730909	21731047	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000579;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000579:6;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21730909	21731047	.	-	1	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000579;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000579:6;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21731048	21731484	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000579;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000579:6;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21731485	21731612	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000579;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000579:7;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21731485	21731612	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000579;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000579:7;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21731613	21732409	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000579;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000579:7;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21732410	21732506	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000579;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000579:8;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21732410	21732506	.	-	1	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000579;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000579:8;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21732507	21737385	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000579;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000579:8;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21737386	21737533	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000579;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000579:9;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21737386	21737533	.	-	2	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000579;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000579:9;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21737534	21737648	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000579;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000579:9;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21737649	21737773	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000579;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000579:10;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21737649	21737773	.	-	1	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000579;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000579:10;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21737774	21737856	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000579;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000579:10;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21737857	21738038	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000579;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000579:11;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21737857	21738038	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000579;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000579:11;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21738039	21738312	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000579;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000579:11;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21738313	21738507	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000579;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000579:12;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21738313	21738507	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000579;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000579:12;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21738508	21738629	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000579;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000579:12;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21738630	21738749	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000579;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000579:13;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21738630	21738749	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000579;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000579:13;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21738750	21742905	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000579;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000579:13;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21742906	21743068	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000579;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000579:14;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21742906	21743068	.	-	1	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000579;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000579:14;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21743069	21743163	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000579;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000579:14;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21743164	21743345	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000579;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000579:15;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21743164	21743345	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000579;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000579:15;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21743346	21753805	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000579;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000579:15;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21753806	21753964	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000579;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000579:16;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21753806	21753964	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000579;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000579:16;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21753965	21754079	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000579;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000579:16;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21754080	21754199	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000579;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000579:17;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21754080	21754199	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000579;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000579:17;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21754200	21754615	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000579;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000579:17;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21754616	21754774	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000579;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000579:18;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21754616	21754774	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000579;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000579:18;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21754775	21757383	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000579;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000579:18;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21757384	21757529	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000579;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000579:19;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21757384	21757529	.	-	2	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000579;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000579:19;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21757530	21757652	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000579;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000579:19;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21757653	21757782	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000579;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000579:20;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21757653	21757782	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000579;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000579:20;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21757783	21761559	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000579;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000579:20;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21761560	21761694	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000579;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000579:21;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21761560	21761694	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000579;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000579:21;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21761695	21763349	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000579;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000579:21;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21763350	21763520	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000579;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000579:22;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21763350	21763520	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000579;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000579:22;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21763521	21763766	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000579;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000579:22;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21763767	21763889	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000579;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000579:23;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21763767	21763889	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000579;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000579:23;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21763890	21765193	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000579;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000579:23;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21765194	21765271	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000579;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000579:24;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21765194	21765271	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000579;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000579:24;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21765272	21766416	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000579;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000579:24;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21766417	21766585	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000579;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000579:25;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21766417	21766566	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000579;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000579:25;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	21766564	21766566	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000579;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:HG03009_ch_T0000579;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21766586	21766702	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000579;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000579:25;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21766703	21766758	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000579;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000579:26;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	21725899	21766758	100	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000580;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_G0000203;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=HG03009_ch_T0000580;Name=KDM5D
HG03009_chrY	CAT	exon	21725899	21728379	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000580;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000580:0;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21728029	21728379	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000580;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000580:0;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	21728029	21728031	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000580;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:HG03009_ch_T0000580;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21728380	21728474	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000580;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000580:0;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21728475	21728674	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000580;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000580:1;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21728475	21728674	.	-	2	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000580;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000580:1;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21728675	21728827	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000580;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000580:1;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21728828	21728897	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000580;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000580:2;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21728828	21728897	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000580;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000580:2;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21728898	21729180	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000580;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000580:2;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21729181	21729780	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000580;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000580:3;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21729181	21729780	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000580;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000580:3;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21729781	21729967	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000580;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000580:3;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21729968	21730105	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000580;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000580:4;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21729968	21730105	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000580;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000580:4;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21730106	21730355	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000580;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000580:4;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21730356	21730457	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000580;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000580:5;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21730356	21730457	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000580;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000580:5;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21730458	21730908	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000580;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000580:5;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21730909	21731047	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000580;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000580:6;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21730909	21731047	.	-	1	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000580;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000580:6;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21731048	21731484	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000580;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000580:6;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21731485	21731843	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000580;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000580:7;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21731485	21731843	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000580;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000580:7;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21731844	21732409	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000580;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000580:7;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21732410	21732506	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000580;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000580:8;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21732410	21732506	.	-	1	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000580;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000580:8;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21732507	21737385	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000580;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000580:8;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21737386	21737533	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000580;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000580:9;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21737386	21737533	.	-	2	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000580;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000580:9;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21737534	21737648	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000580;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000580:9;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21737649	21737773	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000580;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000580:10;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21737649	21737773	.	-	1	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000580;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000580:10;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21737774	21737856	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000580;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000580:10;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21737857	21738038	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000580;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000580:11;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21737857	21738038	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000580;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000580:11;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21738039	21738312	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000580;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000580:11;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21738313	21738507	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000580;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000580:12;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21738313	21738507	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000580;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000580:12;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21738508	21738629	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000580;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000580:12;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21738630	21738749	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000580;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000580:13;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21738630	21738749	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000580;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000580:13;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21738750	21742905	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000580;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000580:13;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21742906	21743068	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000580;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000580:14;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21742906	21743068	.	-	1	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000580;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000580:14;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21743069	21743163	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000580;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000580:14;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21743164	21743345	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000580;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000580:15;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21743164	21743345	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000580;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000580:15;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21743346	21753805	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000580;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000580:15;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21753806	21753964	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000580;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000580:16;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21753806	21753964	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000580;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000580:16;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21753965	21754079	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000580;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000580:16;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21754080	21754199	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000580;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000580:17;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21754080	21754199	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000580;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000580:17;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21754200	21754615	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000580;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000580:17;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21754616	21754774	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000580;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000580:18;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21754616	21754774	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000580;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000580:18;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21754775	21757383	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000580;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000580:18;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21757384	21757529	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000580;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000580:19;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21757384	21757529	.	-	2	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000580;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000580:19;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21757530	21757652	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000580;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000580:19;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21757653	21757782	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000580;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000580:20;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21757653	21757782	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000580;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000580:20;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21757783	21761559	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000580;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000580:20;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21761560	21761694	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000580;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000580:21;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21761560	21761694	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000580;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000580:21;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21761695	21763349	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000580;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000580:21;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21763350	21763520	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000580;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000580:22;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21763350	21763520	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000580;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000580:22;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21763521	21763766	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000580;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000580:22;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21763767	21763889	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000580;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000580:23;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21763767	21763889	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000580;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000580:23;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21763890	21765193	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000580;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000580:23;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21765194	21765271	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000580;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000580:24;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21765194	21765271	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000580;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000580:24;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21765272	21766416	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000580;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000580:24;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21766417	21766585	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000580;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000580:25;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21766417	21766566	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000580;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000580:25;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	21766564	21766566	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000580;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:HG03009_ch_T0000580;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21766586	21766702	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000580;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000580:25;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21766703	21766758	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000580;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000580:26;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	21725899	21766758	100	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000581;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_G0000203;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=HG03009_ch_T0000581;Name=KDM5D
HG03009_chrY	CAT	exon	21725899	21728379	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000581;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000581:0;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21728029	21728379	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000581;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000581:0;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	21728029	21728031	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000581;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:HG03009_ch_T0000581;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21728380	21728474	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000581;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000581:0;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21728475	21728674	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000581;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000581:1;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21728475	21728674	.	-	2	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000581;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000581:1;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21728675	21728827	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000581;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000581:1;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21728828	21728897	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000581;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000581:2;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21728828	21728897	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000581;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000581:2;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21728898	21729180	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000581;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000581:2;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21729181	21729780	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000581;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000581:3;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21729181	21729780	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000581;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000581:3;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21729781	21729967	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000581;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000581:3;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21729968	21730105	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000581;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000581:4;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21729968	21730105	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000581;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000581:4;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21730106	21730355	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000581;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000581:4;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21730356	21730457	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000581;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000581:5;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21730356	21730457	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000581;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000581:5;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21730458	21730908	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000581;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000581:5;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21730909	21731047	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000581;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000581:6;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21730909	21731047	.	-	1	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000581;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000581:6;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21731048	21731484	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000581;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000581:6;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21731485	21731843	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000581;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000581:7;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21731485	21731843	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000581;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000581:7;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21731844	21732409	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000581;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000581:7;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21732410	21732506	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000581;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000581:8;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21732410	21732506	.	-	1	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000581;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000581:8;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21732507	21737385	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000581;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000581:8;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21737386	21737533	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000581;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000581:9;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21737386	21737533	.	-	2	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000581;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000581:9;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21737534	21737648	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000581;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000581:9;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21737649	21737773	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000581;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000581:10;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21737649	21737773	.	-	1	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000581;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000581:10;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21737774	21737856	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000581;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000581:10;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21737857	21738038	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000581;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000581:11;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21737857	21738038	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000581;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000581:11;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21738039	21738312	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000581;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000581:11;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21738313	21738507	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000581;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000581:12;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21738313	21738507	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000581;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000581:12;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21738508	21738629	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000581;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000581:12;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21738630	21738749	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000581;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000581:13;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21738630	21738749	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000581;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000581:13;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21738750	21742905	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000581;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000581:13;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21742906	21743068	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000581;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000581:14;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21742906	21743068	.	-	1	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000581;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000581:14;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21743069	21743163	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000581;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000581:14;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21743164	21743345	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000581;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000581:15;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21743164	21743345	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000581;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000581:15;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21743346	21753805	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000581;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000581:15;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21753806	21753964	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000581;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000581:16;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21753806	21753964	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000581;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000581:16;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21753965	21754079	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000581;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000581:16;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21754080	21754199	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000581;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000581:17;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21754080	21754199	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000581;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000581:17;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21754200	21754615	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000581;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000581:17;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21754616	21754774	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000581;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000581:18;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21754616	21754774	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000581;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000581:18;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21754775	21757383	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000581;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000581:18;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21757384	21757529	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000581;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000581:19;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21757384	21757529	.	-	2	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000581;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000581:19;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21757530	21757652	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000581;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000581:19;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21757653	21757782	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000581;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000581:20;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21757653	21757782	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000581;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000581:20;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21757783	21763349	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000581;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000581:20;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21763350	21763520	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000581;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000581:21;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21763350	21763520	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000581;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000581:21;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21763521	21763766	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000581;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000581:21;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21763767	21763889	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000581;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000581:22;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21763767	21763889	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000581;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000581:22;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21763890	21765193	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000581;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000581:22;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21765194	21765271	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000581;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000581:23;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21765194	21765271	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000581;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000581:23;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21765272	21766416	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000581;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000581:23;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21766417	21766585	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000581;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000581:24;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21766417	21766566	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000581;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000581:24;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	21766564	21766566	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000581;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:HG03009_ch_T0000581;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21766586	21766702	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000581;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000581:24;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21766703	21766758	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000581;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000581:25;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	21728512	21766758	100	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000582;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_G0000203;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=HG03009_ch_T0000582;Name=KDM5D
HG03009_chrY	CAT	exon	21728512	21728642	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000582;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000582:0;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21728614	21728642	.	-	2	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000582;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000582:0;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	21728614	21728616	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000582;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:HG03009_ch_T0000582;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21728643	21728827	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000582;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000582:0;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21728828	21728897	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000582;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000582:1;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21728828	21728897	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000582;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000582:1;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21728898	21729180	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000582;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000582:1;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21729181	21729780	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000582;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000582:2;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21729181	21729780	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000582;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000582:2;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21729781	21729967	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000582;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000582:2;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21729968	21730105	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000582;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000582:3;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21729968	21730105	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000582;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000582:3;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21730106	21730277	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000582;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000582:3;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21730278	21730457	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000582;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000582:4;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21730278	21730457	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000582;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000582:4;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21730458	21730908	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000582;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000582:4;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21730909	21731047	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000582;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000582:5;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21730909	21731047	.	-	1	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000582;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000582:5;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21731048	21731484	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000582;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000582:5;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21731485	21731843	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000582;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000582:6;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21731485	21731843	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000582;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000582:6;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21731844	21732409	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000582;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000582:6;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21732410	21732506	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000582;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000582:7;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21732410	21732506	.	-	1	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000582;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000582:7;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21732507	21737385	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000582;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000582:7;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21737386	21737533	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000582;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000582:8;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21737386	21737533	.	-	2	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000582;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000582:8;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21737534	21737648	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000582;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000582:8;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21737649	21737773	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000582;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000582:9;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21737649	21737773	.	-	1	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000582;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000582:9;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21737774	21737856	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000582;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000582:9;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21737857	21738038	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000582;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000582:10;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21737857	21738038	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000582;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000582:10;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21738039	21738312	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000582;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000582:10;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21738313	21738507	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000582;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000582:11;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21738313	21738507	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000582;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000582:11;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21738508	21738629	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000582;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000582:11;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21738630	21738749	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000582;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000582:12;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21738630	21738749	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000582;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000582:12;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21738750	21742905	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000582;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000582:12;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21742906	21743068	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000582;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000582:13;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21742906	21743068	.	-	1	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000582;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000582:13;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21743069	21743163	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000582;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000582:13;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21743164	21743345	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000582;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000582:14;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21743164	21743345	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000582;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000582:14;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21743346	21753805	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000582;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000582:14;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21753806	21753964	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000582;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000582:15;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21753806	21753964	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000582;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000582:15;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21753965	21754079	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000582;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000582:15;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21754080	21754199	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000582;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000582:16;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21754080	21754199	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000582;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000582:16;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21754200	21754615	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000582;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000582:16;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21754616	21754774	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000582;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000582:17;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21754616	21754774	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000582;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000582:17;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21754775	21757383	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000582;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000582:17;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21757384	21757529	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000582;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000582:18;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21757384	21757529	.	-	2	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000582;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000582:18;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21757530	21757652	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000582;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000582:18;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21757653	21757782	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000582;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000582:19;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21757653	21757782	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000582;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000582:19;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21757783	21761559	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000582;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000582:19;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21761560	21761694	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000582;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000582:20;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21761560	21761694	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000582;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000582:20;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21761695	21763349	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000582;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000582:20;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21763350	21763520	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000582;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000582:21;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21763350	21763520	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000582;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000582:21;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21763521	21763766	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000582;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000582:21;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21763767	21763889	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000582;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000582:22;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21763767	21763889	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000582;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000582:22;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21763890	21765193	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000582;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000582:22;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21765194	21765271	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000582;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000582:23;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21765194	21765271	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000582;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000582:23;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21765272	21766416	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000582;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000582:23;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21766417	21766585	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000582;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000582:24;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21766417	21766566	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000582;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000582:24;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	21766564	21766566	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000582;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:HG03009_ch_T0000582;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21766586	21766702	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000582;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000582:24;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21766703	21766758	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000582;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000582:25;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	21731494	21766758	100	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000583;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_G0000203;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=HG03009_ch_T0000583;Name=KDM5D
HG03009_chrY	CAT	exon	21731494	21732294	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000583;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000583;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000583:0;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21732211	21732294	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000583;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000583;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000583:0;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	21732211	21732213	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000583;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000583;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:HG03009_ch_T0000583;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21732295	21732409	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000583;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000583;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000583:0;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21732410	21732506	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000583;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000583;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000583:1;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21732410	21732506	.	-	1	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000583;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000583;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000583:1;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21732507	21737385	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000583;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000583;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000583:1;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21737386	21737533	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000583;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000583;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000583:2;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21737386	21737533	.	-	2	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000583;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000583;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000583:2;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21737534	21737648	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000583;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000583;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000583:2;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21737649	21737773	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000583;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000583;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000583:3;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21737649	21737773	.	-	1	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000583;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000583;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000583:3;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21737774	21737856	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000583;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000583;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000583:3;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21737857	21738038	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000583;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000583;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000583:4;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21737857	21738038	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000583;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000583;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000583:4;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21738039	21738312	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000583;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000583;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000583:4;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21738313	21738507	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000583;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000583;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000583:5;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21738313	21738507	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000583;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000583;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000583:5;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21738508	21738629	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000583;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000583;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000583:5;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21738630	21738749	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000583;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000583;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000583:6;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21738630	21738749	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000583;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000583;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000583:6;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21738750	21742905	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000583;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000583;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000583:6;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21742906	21743068	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000583;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000583;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000583:7;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21742906	21743068	.	-	1	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000583;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000583;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000583:7;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21743069	21743163	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000583;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000583;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000583:7;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21743164	21743345	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000583;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000583;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000583:8;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21743164	21743345	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000583;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000583;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000583:8;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21743346	21753805	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000583;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000583;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000583:8;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21753806	21753964	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000583;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000583;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000583:9;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21753806	21753964	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000583;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000583;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000583:9;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21753965	21754079	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000583;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000583;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000583:9;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21754080	21754199	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000583;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000583;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000583:10;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21754080	21754199	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000583;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000583;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000583:10;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21754200	21754615	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000583;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000583;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000583:10;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21754616	21754774	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000583;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000583;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000583:11;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21754616	21754774	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000583;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000583;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000583:11;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21754775	21757383	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000583;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000583;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000583:11;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21757384	21757529	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000583;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000583;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000583:12;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21757384	21757529	.	-	2	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000583;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000583;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000583:12;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21757530	21757652	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000583;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000583;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000583:12;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21757653	21757782	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000583;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000583;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000583:13;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21757653	21757782	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000583;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000583;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000583:13;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21757783	21761559	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000583;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000583;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000583:13;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21761560	21761694	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000583;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000583;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000583:14;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21761560	21761694	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000583;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000583;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000583:14;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21761695	21763349	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000583;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000583;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000583:14;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21763350	21763520	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000583;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000583;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000583:15;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21763350	21763520	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000583;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000583;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000583:15;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21763521	21763766	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000583;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000583;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000583:15;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21763767	21763889	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000583;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000583;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000583:16;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21763767	21763889	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000583;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000583;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000583:16;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21763890	21765193	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000583;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000583;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000583:16;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21765194	21765271	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000583;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000583;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000583:17;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21765194	21765271	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000583;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000583;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000583:17;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21765272	21766416	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000583;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000583;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000583:17;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21766417	21766585	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000583;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000583;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000583:18;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21766417	21766566	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000583;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000583;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000583:18;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	21766564	21766566	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000583;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000583;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:HG03009_ch_T0000583;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21766586	21766702	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000583;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000583;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000583:18;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21766703	21766758	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000583;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000583;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000583:19;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	21732434	21766758	100	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000584;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_G0000203;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=HG03009_ch_T0000584;Name=KDM5D
HG03009_chrY	CAT	exon	21732434	21732506	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000584;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000584;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000584:0;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21732507	21737617	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000584;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000584;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000584:0;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21737618	21737773	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000584;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000584;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000584:1;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21737641	21737773	.	-	1	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000584;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000584;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000584:0;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	21737641	21737643	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000584;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000584;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:HG03009_ch_T0000584;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21737774	21737856	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000584;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000584;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000584:1;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21737857	21738038	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000584;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000584;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000584:2;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21737857	21738038	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000584;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000584;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000584:1;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21738039	21738312	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000584;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000584;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000584:2;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21738313	21738507	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000584;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000584;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000584:3;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21738313	21738507	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000584;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000584;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000584:2;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21738508	21738629	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000584;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000584;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000584:3;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21738630	21738749	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000584;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000584;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000584:4;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21738630	21738749	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000584;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000584;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000584:3;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21738750	21742905	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000584;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000584;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000584:4;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21742906	21743068	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000584;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000584;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000584:5;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21742906	21743068	.	-	1	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000584;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000584;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000584:4;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21743069	21743163	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000584;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000584;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000584:5;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21743164	21743345	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000584;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000584;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000584:6;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21743164	21743345	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000584;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000584;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000584:5;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21743346	21753805	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000584;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000584;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000584:6;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21753806	21753964	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000584;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000584;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000584:7;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21753806	21753964	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000584;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000584;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000584:6;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21753965	21754079	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000584;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000584;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000584:7;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21754080	21754199	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000584;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000584;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000584:8;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21754080	21754199	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000584;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000584;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000584:7;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21754200	21754615	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000584;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000584;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000584:8;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21754616	21754774	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000584;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000584;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000584:9;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21754616	21754774	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000584;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000584;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000584:8;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21754775	21757383	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000584;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000584;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000584:9;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21757384	21757529	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000584;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000584;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000584:10;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21757384	21757529	.	-	2	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000584;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000584;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000584:9;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21757530	21757652	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000584;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000584;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000584:10;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21757653	21757782	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000584;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000584;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000584:11;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21757653	21757782	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000584;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000584;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000584:10;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21757783	21761559	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000584;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000584;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000584:11;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21761560	21761694	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000584;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000584;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000584:12;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21761560	21761694	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000584;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000584;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000584:11;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21761695	21763349	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000584;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000584;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000584:12;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21763350	21763520	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000584;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000584;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000584:13;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21763350	21763520	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000584;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000584;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000584:12;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21763521	21763766	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000584;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000584;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000584:13;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21763767	21763889	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000584;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000584;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000584:14;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21763767	21763889	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000584;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000584;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000584:13;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21763890	21765193	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000584;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000584;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000584:14;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21765194	21765271	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000584;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000584;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000584:15;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21765194	21765271	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000584;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000584;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000584:14;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21765272	21766416	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000584;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000584;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000584:15;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21766417	21766585	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000584;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000584;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000584:16;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21766417	21766566	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000584;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000584;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000584:15;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	21766564	21766566	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000584;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000584;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:HG03009_ch_T0000584;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21766586	21766702	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000584;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000584;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000584:16;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21766703	21766758	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000584;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000584;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000584:17;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	21737905	21766758	100	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000585;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_G0000203;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=HG03009_ch_T0000585;Name=KDM5D
HG03009_chrY	CAT	exon	21737905	21738038	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000585;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000585;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000585:0;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21738022	21738038	.	-	2	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000585;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000585;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000585:0;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	21738022	21738024	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000585;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000585;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:HG03009_ch_T0000585;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21738039	21738132	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000585;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000585;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000585:0;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21738133	21738145	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000585;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000585;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000585:1;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21738133	21738145	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000585;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000585;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000585:1;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21738146	21738312	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000585;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000585;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000585:1;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21738313	21738507	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000585;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000585;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000585:2;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21738313	21738507	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000585;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000585;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000585:2;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21738508	21738629	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000585;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000585;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000585:2;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21738630	21738749	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000585;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000585;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000585:3;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21738630	21738749	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000585;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000585;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000585:3;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21738750	21742905	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000585;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000585;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000585:3;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21742906	21743068	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000585;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000585;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000585:4;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21742906	21743068	.	-	1	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000585;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000585;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000585:4;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21743069	21743163	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000585;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000585;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000585:4;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21743164	21743345	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000585;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000585;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000585:5;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21743164	21743345	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000585;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000585;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000585:5;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21743346	21753805	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000585;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000585;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000585:5;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21753806	21753964	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000585;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000585;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000585:6;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21753806	21753964	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000585;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000585;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000585:6;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21753965	21754079	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000585;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000585;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000585:6;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21754080	21754199	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000585;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000585;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000585:7;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21754080	21754199	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000585;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000585;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000585:7;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21754200	21754615	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000585;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000585;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000585:7;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21754616	21754774	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000585;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000585;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000585:8;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21754616	21754774	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000585;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000585;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000585:8;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21754775	21757383	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000585;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000585;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000585:8;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21757384	21757529	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000585;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000585;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000585:9;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21757384	21757529	.	-	2	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000585;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000585;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000585:9;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21757530	21757652	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000585;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000585;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000585:9;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21757653	21757782	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000585;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000585;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000585:10;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21757653	21757782	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000585;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000585;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000585:10;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21757783	21761559	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000585;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000585;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000585:10;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21761560	21761694	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000585;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000585;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000585:11;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21761560	21761694	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000585;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000585;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000585:11;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21761695	21763349	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000585;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000585;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000585:11;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21763350	21763520	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000585;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000585;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000585:12;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21763350	21763520	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000585;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000585;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000585:12;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21763521	21763766	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000585;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000585;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000585:12;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21763767	21763889	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000585;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000585;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000585:13;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21763767	21763889	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000585;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000585;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000585:13;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21763890	21765193	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000585;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000585;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000585:13;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21765194	21765271	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000585;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000585;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000585:14;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21765194	21765271	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000585;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000585;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000585:14;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21765272	21766416	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000585;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000585;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000585:14;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21766417	21766585	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000585;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000585;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000585:15;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	21766417	21766566	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000585;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000585;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03009_ch_T0000585:15;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	21766564	21766566	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000585;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000585;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:HG03009_ch_T0000585;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21766586	21766702	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000585;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000585;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03009_ch_T0000585:15;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21766703	21766758	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000585;gene_id=HG03009_ch_G0000203;Parent=HG03009_ch_T0000585;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03009_ch_T0000585:16;Name=KDM5D;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	21766788	21779481	.	+	.	source_gene_common_name=LOC105377224;source_gene=hg002_chrY_paternal_436;alternative_source_transcripts=hg002_chrY_paternal_436.1,hg002_chrY_paternal_436.1;gene_id=HG03009_ch_G0000204;gene_biotype=lncRNA;gene_name=LOC105377224;gene_sources=liftoff;ID=HG03009_ch_G0000204;Name=LOC105377224
HG03009_chrY	CAT	transcript	21766788	21779588	1000	+	.	source_transcript=hg002_chrY_paternal_436.1;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.1,hg002_chrY_paternal_436.1;transcript_id=HG03009_ch_T0000586;gene_id=HG03009_ch_G0000204;Parent=HG03009_ch_G0000204;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=HG03009_ch_T0000586;Name=LOC105377224
HG03009_chrY	CAT	exon	21766788	21767745	.	+	.	source_transcript=hg002_chrY_paternal_436.1;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.1,hg002_chrY_paternal_436.1;transcript_id=HG03009_ch_T0000586;gene_id=HG03009_ch_G0000204;Parent=HG03009_ch_T0000586;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=exon:HG03009_ch_T0000586:0;Name=LOC105377224;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21767746	21776657	.	+	.	source_transcript=hg002_chrY_paternal_436.1;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.1,hg002_chrY_paternal_436.1;transcript_id=HG03009_ch_T0000586;gene_id=HG03009_ch_G0000204;Parent=HG03009_ch_T0000586;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=intron:HG03009_ch_T0000586:0;Name=LOC105377224;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21776658	21776847	.	+	.	source_transcript=hg002_chrY_paternal_436.1;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.1,hg002_chrY_paternal_436.1;transcript_id=HG03009_ch_T0000586;gene_id=HG03009_ch_G0000204;Parent=HG03009_ch_T0000586;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=exon:HG03009_ch_T0000586:1;Name=LOC105377224;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21776848	21777236	.	+	.	source_transcript=hg002_chrY_paternal_436.1;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.1,hg002_chrY_paternal_436.1;transcript_id=HG03009_ch_T0000586;gene_id=HG03009_ch_G0000204;Parent=HG03009_ch_T0000586;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=intron:HG03009_ch_T0000586:1;Name=LOC105377224;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21777237	21779588	.	+	.	source_transcript=hg002_chrY_paternal_436.1;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.1,hg002_chrY_paternal_436.1;transcript_id=HG03009_ch_T0000586;gene_id=HG03009_ch_G0000204;Parent=HG03009_ch_T0000586;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=exon:HG03009_ch_T0000586:2;Name=LOC105377224;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	21766817	21781103	1000	+	.	source_transcript=hg002_chrY_paternal_436.2;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.2,hg002_chrY_paternal_436.2;transcript_id=HG03009_ch_T0000587;gene_id=HG03009_ch_G0000204;Parent=HG03009_ch_G0000204;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=HG03009_ch_T0000587;Name=LOC105377224
HG03009_chrY	CAT	exon	21766817	21767745	.	+	.	source_transcript=hg002_chrY_paternal_436.2;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.2,hg002_chrY_paternal_436.2;transcript_id=HG03009_ch_T0000587;gene_id=HG03009_ch_G0000204;Parent=HG03009_ch_T0000587;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=exon:HG03009_ch_T0000587:0;Name=LOC105377224;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21767746	21776758	.	+	.	source_transcript=hg002_chrY_paternal_436.2;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.2,hg002_chrY_paternal_436.2;transcript_id=HG03009_ch_T0000587;gene_id=HG03009_ch_G0000204;Parent=HG03009_ch_T0000587;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=intron:HG03009_ch_T0000587:0;Name=LOC105377224;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21776759	21776847	.	+	.	source_transcript=hg002_chrY_paternal_436.2;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.2,hg002_chrY_paternal_436.2;transcript_id=HG03009_ch_T0000587;gene_id=HG03009_ch_G0000204;Parent=HG03009_ch_T0000587;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=exon:HG03009_ch_T0000587:1;Name=LOC105377224;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21776848	21777236	.	+	.	source_transcript=hg002_chrY_paternal_436.2;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.2,hg002_chrY_paternal_436.2;transcript_id=HG03009_ch_T0000587;gene_id=HG03009_ch_G0000204;Parent=HG03009_ch_T0000587;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=intron:HG03009_ch_T0000587:1;Name=LOC105377224;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21777237	21781103	.	+	.	source_transcript=hg002_chrY_paternal_436.2;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.2,hg002_chrY_paternal_436.2;transcript_id=HG03009_ch_T0000587;gene_id=HG03009_ch_G0000204;Parent=HG03009_ch_T0000587;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=exon:HG03009_ch_T0000587:2;Name=LOC105377224;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	21766870	21779481	1000	+	.	source_transcript=hg002_chrY_paternal_436.3;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.3,hg002_chrY_paternal_436.3;transcript_id=HG03009_ch_T0000588;gene_id=HG03009_ch_G0000204;Parent=HG03009_ch_G0000204;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=HG03009_ch_T0000588;Name=LOC105377224
HG03009_chrY	CAT	exon	21766870	21767745	.	+	.	source_transcript=hg002_chrY_paternal_436.3;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.3,hg002_chrY_paternal_436.3;transcript_id=HG03009_ch_T0000588;gene_id=HG03009_ch_G0000204;Parent=HG03009_ch_T0000588;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=exon:HG03009_ch_T0000588:0;Name=LOC105377224;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21767746	21776758	.	+	.	source_transcript=hg002_chrY_paternal_436.3;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.3,hg002_chrY_paternal_436.3;transcript_id=HG03009_ch_T0000588;gene_id=HG03009_ch_G0000204;Parent=HG03009_ch_T0000588;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=intron:HG03009_ch_T0000588:0;Name=LOC105377224;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21776759	21776847	.	+	.	source_transcript=hg002_chrY_paternal_436.3;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.3,hg002_chrY_paternal_436.3;transcript_id=HG03009_ch_T0000588;gene_id=HG03009_ch_G0000204;Parent=HG03009_ch_T0000588;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=exon:HG03009_ch_T0000588:1;Name=LOC105377224;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21776848	21777236	.	+	.	source_transcript=hg002_chrY_paternal_436.3;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.3,hg002_chrY_paternal_436.3;transcript_id=HG03009_ch_T0000588;gene_id=HG03009_ch_G0000204;Parent=HG03009_ch_T0000588;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=intron:HG03009_ch_T0000588:1;Name=LOC105377224;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21777237	21777356	.	+	.	source_transcript=hg002_chrY_paternal_436.3;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.3,hg002_chrY_paternal_436.3;transcript_id=HG03009_ch_T0000588;gene_id=HG03009_ch_G0000204;Parent=HG03009_ch_T0000588;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=exon:HG03009_ch_T0000588:2;Name=LOC105377224;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	21777357	21778674	.	+	.	source_transcript=hg002_chrY_paternal_436.3;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.3,hg002_chrY_paternal_436.3;transcript_id=HG03009_ch_T0000588;gene_id=HG03009_ch_G0000204;Parent=HG03009_ch_T0000588;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=intron:HG03009_ch_T0000588:2;Name=LOC105377224;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	21778675	21779481	.	+	.	source_transcript=hg002_chrY_paternal_436.3;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.3,hg002_chrY_paternal_436.3;transcript_id=HG03009_ch_T0000588;gene_id=HG03009_ch_G0000204;Parent=HG03009_ch_T0000588;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=exon:HG03009_ch_T0000588:3;Name=LOC105377224;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	22461266	22514806	.	-	.	source_gene_common_name=TTTY10;source_gene=hg002_chrY_paternal_441;alternative_source_transcripts=hg002_chrY_paternal_441.1,hg002_chrY_paternal_441.1;gene_id=HG03009_ch_G0000205;gene_biotype=lncRNA;gene_name=TTTY10;gene_sources=liftoff;ID=HG03009_ch_G0000205;Name=TTTY10
HG03009_chrY	CAT	transcript	22461266	22514806	1000	-	.	source_transcript=hg002_chrY_paternal_441.1;source_transcript_name=hg002_chrY_paternal_441.1;source_gene=hg002_chrY_paternal_441;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_441;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_441.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_441.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=hg002_chrY_paternal_441.1,hg002_chrY_paternal_441.1;transcript_id=HG03009_ch_T0000589;gene_id=HG03009_ch_G0000205;Parent=HG03009_ch_G0000205;transcript_name=hg002_chrY_paternal_441.1;gene_name=TTTY10;ID=HG03009_ch_T0000589;Name=TTTY10
HG03009_chrY	CAT	exon	22461266	22461420	.	-	.	source_transcript=hg002_chrY_paternal_441.1;source_transcript_name=hg002_chrY_paternal_441.1;source_gene=hg002_chrY_paternal_441;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_441;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_441.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=hg002_chrY_paternal_441.1,hg002_chrY_paternal_441.1;transcript_id=HG03009_ch_T0000589;gene_id=HG03009_ch_G0000205;Parent=HG03009_ch_T0000589;transcript_name=hg002_chrY_paternal_441.1;gene_name=TTTY10;ID=exon:HG03009_ch_T0000589:0;Name=TTTY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	22461421	22462025	.	-	.	source_transcript=hg002_chrY_paternal_441.1;source_transcript_name=hg002_chrY_paternal_441.1;source_gene=hg002_chrY_paternal_441;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_441;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_441.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=hg002_chrY_paternal_441.1,hg002_chrY_paternal_441.1;transcript_id=HG03009_ch_T0000589;gene_id=HG03009_ch_G0000205;Parent=HG03009_ch_T0000589;transcript_name=hg002_chrY_paternal_441.1;gene_name=TTTY10;ID=intron:HG03009_ch_T0000589:0;Name=TTTY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	22462026	22462265	.	-	.	source_transcript=hg002_chrY_paternal_441.1;source_transcript_name=hg002_chrY_paternal_441.1;source_gene=hg002_chrY_paternal_441;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_441;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_441.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=hg002_chrY_paternal_441.1,hg002_chrY_paternal_441.1;transcript_id=HG03009_ch_T0000589;gene_id=HG03009_ch_G0000205;Parent=HG03009_ch_T0000589;transcript_name=hg002_chrY_paternal_441.1;gene_name=TTTY10;ID=exon:HG03009_ch_T0000589:1;Name=TTTY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	22462266	22463786	.	-	.	source_transcript=hg002_chrY_paternal_441.1;source_transcript_name=hg002_chrY_paternal_441.1;source_gene=hg002_chrY_paternal_441;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_441;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_441.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=hg002_chrY_paternal_441.1,hg002_chrY_paternal_441.1;transcript_id=HG03009_ch_T0000589;gene_id=HG03009_ch_G0000205;Parent=HG03009_ch_T0000589;transcript_name=hg002_chrY_paternal_441.1;gene_name=TTTY10;ID=intron:HG03009_ch_T0000589:1;Name=TTTY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	22463787	22463846	.	-	.	source_transcript=hg002_chrY_paternal_441.1;source_transcript_name=hg002_chrY_paternal_441.1;source_gene=hg002_chrY_paternal_441;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_441;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_441.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=hg002_chrY_paternal_441.1,hg002_chrY_paternal_441.1;transcript_id=HG03009_ch_T0000589;gene_id=HG03009_ch_G0000205;Parent=HG03009_ch_T0000589;transcript_name=hg002_chrY_paternal_441.1;gene_name=TTTY10;ID=exon:HG03009_ch_T0000589:2;Name=TTTY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	22463847	22465469	.	-	.	source_transcript=hg002_chrY_paternal_441.1;source_transcript_name=hg002_chrY_paternal_441.1;source_gene=hg002_chrY_paternal_441;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_441;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_441.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=hg002_chrY_paternal_441.1,hg002_chrY_paternal_441.1;transcript_id=HG03009_ch_T0000589;gene_id=HG03009_ch_G0000205;Parent=HG03009_ch_T0000589;transcript_name=hg002_chrY_paternal_441.1;gene_name=TTTY10;ID=intron:HG03009_ch_T0000589:2;Name=TTTY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	22465470	22465579	.	-	.	source_transcript=hg002_chrY_paternal_441.1;source_transcript_name=hg002_chrY_paternal_441.1;source_gene=hg002_chrY_paternal_441;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_441;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_441.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=hg002_chrY_paternal_441.1,hg002_chrY_paternal_441.1;transcript_id=HG03009_ch_T0000589;gene_id=HG03009_ch_G0000205;Parent=HG03009_ch_T0000589;transcript_name=hg002_chrY_paternal_441.1;gene_name=TTTY10;ID=exon:HG03009_ch_T0000589:3;Name=TTTY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	22465580	22502929	.	-	.	source_transcript=hg002_chrY_paternal_441.1;source_transcript_name=hg002_chrY_paternal_441.1;source_gene=hg002_chrY_paternal_441;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_441;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_441.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=hg002_chrY_paternal_441.1,hg002_chrY_paternal_441.1;transcript_id=HG03009_ch_T0000589;gene_id=HG03009_ch_G0000205;Parent=HG03009_ch_T0000589;transcript_name=hg002_chrY_paternal_441.1;gene_name=TTTY10;ID=intron:HG03009_ch_T0000589:3;Name=TTTY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	22502930	22503034	.	-	.	source_transcript=hg002_chrY_paternal_441.1;source_transcript_name=hg002_chrY_paternal_441.1;source_gene=hg002_chrY_paternal_441;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_441;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_441.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=hg002_chrY_paternal_441.1,hg002_chrY_paternal_441.1;transcript_id=HG03009_ch_T0000589;gene_id=HG03009_ch_G0000205;Parent=HG03009_ch_T0000589;transcript_name=hg002_chrY_paternal_441.1;gene_name=TTTY10;ID=exon:HG03009_ch_T0000589:4;Name=TTTY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	22503035	22513848	.	-	.	source_transcript=hg002_chrY_paternal_441.1;source_transcript_name=hg002_chrY_paternal_441.1;source_gene=hg002_chrY_paternal_441;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_441;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_441.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=hg002_chrY_paternal_441.1,hg002_chrY_paternal_441.1;transcript_id=HG03009_ch_T0000589;gene_id=HG03009_ch_G0000205;Parent=HG03009_ch_T0000589;transcript_name=hg002_chrY_paternal_441.1;gene_name=TTTY10;ID=intron:HG03009_ch_T0000589:4;Name=TTTY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	22513849	22514806	.	-	.	source_transcript=hg002_chrY_paternal_441.1;source_transcript_name=hg002_chrY_paternal_441.1;source_gene=hg002_chrY_paternal_441;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_441;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_441.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=hg002_chrY_paternal_441.1,hg002_chrY_paternal_441.1;transcript_id=HG03009_ch_T0000589;gene_id=HG03009_ch_G0000205;Parent=HG03009_ch_T0000589;transcript_name=hg002_chrY_paternal_441.1;gene_name=TTTY10;ID=exon:HG03009_ch_T0000589:5;Name=TTTY10;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	22571353	22588732	.	+	.	source_gene_common_name=EIF1AY;source_gene=hg002_chrY_paternal_443;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;gene_id=HG03009_ch_G0000206;gene_biotype=protein_coding;gene_name=EIF1AY;gene_sources=liftoff,augTM;ID=HG03009_ch_G0000206;Name=EIF1AY
HG03009_chrY	CAT	transcript	22571353	22588732	100	+	.	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000590;gene_id=HG03009_ch_G0000206;Parent=HG03009_ch_G0000206;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=HG03009_ch_T0000590;Name=EIF1AY
HG03009_chrY	CAT	exon	22571353	22571464	.	+	.	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000590;gene_id=HG03009_ch_G0000206;Parent=HG03009_ch_T0000590;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=exon:HG03009_ch_T0000590:0;Name=EIF1AY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	22571449	22571464	.	+	0	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000590;gene_id=HG03009_ch_G0000206;Parent=HG03009_ch_T0000590;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=CDS:HG03009_ch_T0000590:0;Name=EIF1AY;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	22571449	22571451	.	+	0	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000590;gene_id=HG03009_ch_G0000206;Parent=HG03009_ch_T0000590;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=start_codon:HG03009_ch_T0000590;Name=EIF1AY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	22571465	22575184	.	+	.	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000590;gene_id=HG03009_ch_G0000206;Parent=HG03009_ch_T0000590;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=intron:HG03009_ch_T0000590:0;Name=EIF1AY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	22575185	22575268	.	+	.	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000590;gene_id=HG03009_ch_G0000206;Parent=HG03009_ch_T0000590;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=exon:HG03009_ch_T0000590:1;Name=EIF1AY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	22575185	22575268	.	+	2	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000590;gene_id=HG03009_ch_G0000206;Parent=HG03009_ch_T0000590;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=CDS:HG03009_ch_T0000590:1;Name=EIF1AY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	22575269	22578166	.	+	.	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000590;gene_id=HG03009_ch_G0000206;Parent=HG03009_ch_T0000590;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=intron:HG03009_ch_T0000590:1;Name=EIF1AY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	22578167	22578270	.	+	.	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000590;gene_id=HG03009_ch_G0000206;Parent=HG03009_ch_T0000590;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=exon:HG03009_ch_T0000590:2;Name=EIF1AY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	22578167	22578270	.	+	2	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000590;gene_id=HG03009_ch_G0000206;Parent=HG03009_ch_T0000590;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=CDS:HG03009_ch_T0000590:2;Name=EIF1AY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	22578271	22583601	.	+	.	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000590;gene_id=HG03009_ch_G0000206;Parent=HG03009_ch_T0000590;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=intron:HG03009_ch_T0000590:2;Name=EIF1AY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	22583602	22583683	.	+	.	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000590;gene_id=HG03009_ch_G0000206;Parent=HG03009_ch_T0000590;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=exon:HG03009_ch_T0000590:3;Name=EIF1AY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	22583602	22583683	.	+	0	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000590;gene_id=HG03009_ch_G0000206;Parent=HG03009_ch_T0000590;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=CDS:HG03009_ch_T0000590:3;Name=EIF1AY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	22583684	22585061	.	+	.	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000590;gene_id=HG03009_ch_G0000206;Parent=HG03009_ch_T0000590;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=intron:HG03009_ch_T0000590:3;Name=EIF1AY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	22585062	22585153	.	+	.	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000590;gene_id=HG03009_ch_G0000206;Parent=HG03009_ch_T0000590;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=exon:HG03009_ch_T0000590:4;Name=EIF1AY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	22585062	22585153	.	+	2	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000590;gene_id=HG03009_ch_G0000206;Parent=HG03009_ch_T0000590;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=CDS:HG03009_ch_T0000590:4;Name=EIF1AY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	22585154	22587918	.	+	.	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000590;gene_id=HG03009_ch_G0000206;Parent=HG03009_ch_T0000590;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=intron:HG03009_ch_T0000590:4;Name=EIF1AY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	22587919	22588732	.	+	.	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000590;gene_id=HG03009_ch_G0000206;Parent=HG03009_ch_T0000590;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=exon:HG03009_ch_T0000590:5;Name=EIF1AY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	22587919	22587924	.	+	0	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000590;gene_id=HG03009_ch_G0000206;Parent=HG03009_ch_T0000590;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=CDS:HG03009_ch_T0000590:5;Name=EIF1AY;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	22587922	22587924	.	+	0	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000590;gene_id=HG03009_ch_G0000206;Parent=HG03009_ch_T0000590;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=stop_codon:HG03009_ch_T0000590;Name=EIF1AY;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	22571353	22588732	100	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000591;gene_id=HG03009_ch_G0000206;Parent=HG03009_ch_G0000206;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=HG03009_ch_T0000591;Name=EIF1AY
HG03009_chrY	CAT	exon	22571353	22571464	.	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000591;gene_id=HG03009_ch_G0000206;Parent=HG03009_ch_T0000591;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=exon:HG03009_ch_T0000591:0;Name=EIF1AY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	22571449	22571464	.	+	0	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000591;gene_id=HG03009_ch_G0000206;Parent=HG03009_ch_T0000591;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=CDS:HG03009_ch_T0000591:0;Name=EIF1AY;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	22571449	22571451	.	+	0	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000591;gene_id=HG03009_ch_G0000206;Parent=HG03009_ch_T0000591;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=start_codon:HG03009_ch_T0000591;Name=EIF1AY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	22571465	22575184	.	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000591;gene_id=HG03009_ch_G0000206;Parent=HG03009_ch_T0000591;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=intron:HG03009_ch_T0000591:0;Name=EIF1AY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	22575185	22575268	.	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000591;gene_id=HG03009_ch_G0000206;Parent=HG03009_ch_T0000591;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=exon:HG03009_ch_T0000591:1;Name=EIF1AY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	22575185	22575268	.	+	2	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000591;gene_id=HG03009_ch_G0000206;Parent=HG03009_ch_T0000591;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=CDS:HG03009_ch_T0000591:1;Name=EIF1AY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	22575269	22578166	.	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000591;gene_id=HG03009_ch_G0000206;Parent=HG03009_ch_T0000591;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=intron:HG03009_ch_T0000591:1;Name=EIF1AY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	22578167	22578270	.	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000591;gene_id=HG03009_ch_G0000206;Parent=HG03009_ch_T0000591;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=exon:HG03009_ch_T0000591:2;Name=EIF1AY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	22578167	22578270	.	+	2	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000591;gene_id=HG03009_ch_G0000206;Parent=HG03009_ch_T0000591;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=CDS:HG03009_ch_T0000591:2;Name=EIF1AY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	22578271	22580051	.	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000591;gene_id=HG03009_ch_G0000206;Parent=HG03009_ch_T0000591;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=intron:HG03009_ch_T0000591:2;Name=EIF1AY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	22580052	22580102	.	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000591;gene_id=HG03009_ch_G0000206;Parent=HG03009_ch_T0000591;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=exon:HG03009_ch_T0000591:3;Name=EIF1AY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	22580052	22580102	.	+	0	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000591;gene_id=HG03009_ch_G0000206;Parent=HG03009_ch_T0000591;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=CDS:HG03009_ch_T0000591:3;Name=EIF1AY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	22580103	22583601	.	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000591;gene_id=HG03009_ch_G0000206;Parent=HG03009_ch_T0000591;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=intron:HG03009_ch_T0000591:3;Name=EIF1AY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	22583602	22583683	.	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000591;gene_id=HG03009_ch_G0000206;Parent=HG03009_ch_T0000591;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=exon:HG03009_ch_T0000591:4;Name=EIF1AY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	22583602	22583683	.	+	0	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000591;gene_id=HG03009_ch_G0000206;Parent=HG03009_ch_T0000591;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=CDS:HG03009_ch_T0000591:4;Name=EIF1AY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	22583684	22585061	.	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000591;gene_id=HG03009_ch_G0000206;Parent=HG03009_ch_T0000591;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=intron:HG03009_ch_T0000591:4;Name=EIF1AY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	22585062	22585153	.	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000591;gene_id=HG03009_ch_G0000206;Parent=HG03009_ch_T0000591;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=exon:HG03009_ch_T0000591:5;Name=EIF1AY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	22585062	22585153	.	+	2	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000591;gene_id=HG03009_ch_G0000206;Parent=HG03009_ch_T0000591;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=CDS:HG03009_ch_T0000591:5;Name=EIF1AY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	22585154	22587918	.	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000591;gene_id=HG03009_ch_G0000206;Parent=HG03009_ch_T0000591;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=intron:HG03009_ch_T0000591:5;Name=EIF1AY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	22587919	22588732	.	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000591;gene_id=HG03009_ch_G0000206;Parent=HG03009_ch_T0000591;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=exon:HG03009_ch_T0000591:6;Name=EIF1AY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	22587919	22587924	.	+	0	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000591;gene_id=HG03009_ch_G0000206;Parent=HG03009_ch_T0000591;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=CDS:HG03009_ch_T0000591:6;Name=EIF1AY;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	22587922	22587924	.	+	0	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000591;gene_id=HG03009_ch_G0000206;Parent=HG03009_ch_T0000591;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=stop_codon:HG03009_ch_T0000591;Name=EIF1AY;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	22751683	22776608	.	+	.	source_gene_common_name=RPS4Y2;source_gene=hg002_chrY_paternal_446;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;gene_id=HG03009_ch_G0000207;gene_biotype=protein_coding;gene_name=RPS4Y2;gene_sources=liftoff,augTM;ID=HG03009_ch_G0000207;Name=RPS4Y2
HG03009_chrY	CAT	transcript	22751683	22776608	100	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000592;gene_id=HG03009_ch_G0000207;Parent=HG03009_ch_G0000207;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=HG03009_ch_T0000592;Name=RPS4Y2
HG03009_chrY	CAT	exon	22751683	22751741	.	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000592;gene_id=HG03009_ch_G0000207;Parent=HG03009_ch_T0000592;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=exon:HG03009_ch_T0000592:0;Name=RPS4Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	22751739	22751741	.	+	0	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000592;gene_id=HG03009_ch_G0000207;Parent=HG03009_ch_T0000592;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=CDS:HG03009_ch_T0000592:0;Name=RPS4Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	22751739	22751741	.	+	0	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000592;gene_id=HG03009_ch_G0000207;Parent=HG03009_ch_T0000592;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=start_codon:HG03009_ch_T0000592;Name=RPS4Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	22751742	22752352	.	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000592;gene_id=HG03009_ch_G0000207;Parent=HG03009_ch_T0000592;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=intron:HG03009_ch_T0000592:0;Name=RPS4Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	22752353	22752430	.	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000592;gene_id=HG03009_ch_G0000207;Parent=HG03009_ch_T0000592;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=exon:HG03009_ch_T0000592:1;Name=RPS4Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	22752353	22752430	.	+	0	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000592;gene_id=HG03009_ch_G0000207;Parent=HG03009_ch_T0000592;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=CDS:HG03009_ch_T0000592:1;Name=RPS4Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	22752431	22755442	.	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000592;gene_id=HG03009_ch_G0000207;Parent=HG03009_ch_T0000592;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=intron:HG03009_ch_T0000592:1;Name=RPS4Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	22755443	22755623	.	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000592;gene_id=HG03009_ch_G0000207;Parent=HG03009_ch_T0000592;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=exon:HG03009_ch_T0000592:2;Name=RPS4Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	22755443	22755623	.	+	0	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000592;gene_id=HG03009_ch_G0000207;Parent=HG03009_ch_T0000592;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=CDS:HG03009_ch_T0000592:2;Name=RPS4Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	22755624	22756858	.	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000592;gene_id=HG03009_ch_G0000207;Parent=HG03009_ch_T0000592;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=intron:HG03009_ch_T0000592:2;Name=RPS4Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	22756859	22756956	.	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000592;gene_id=HG03009_ch_G0000207;Parent=HG03009_ch_T0000592;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=exon:HG03009_ch_T0000592:3;Name=RPS4Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	22756859	22756956	.	+	2	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000592;gene_id=HG03009_ch_G0000207;Parent=HG03009_ch_T0000592;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=CDS:HG03009_ch_T0000592:3;Name=RPS4Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	22756957	22764379	.	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000592;gene_id=HG03009_ch_G0000207;Parent=HG03009_ch_T0000592;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=intron:HG03009_ch_T0000592:3;Name=RPS4Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	22764380	22764551	.	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000592;gene_id=HG03009_ch_G0000207;Parent=HG03009_ch_T0000592;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=exon:HG03009_ch_T0000592:4;Name=RPS4Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	22764380	22764551	.	+	0	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000592;gene_id=HG03009_ch_G0000207;Parent=HG03009_ch_T0000592;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=CDS:HG03009_ch_T0000592:4;Name=RPS4Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	22764552	22775084	.	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000592;gene_id=HG03009_ch_G0000207;Parent=HG03009_ch_T0000592;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=intron:HG03009_ch_T0000592:4;Name=RPS4Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	22775085	22775242	.	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000592;gene_id=HG03009_ch_G0000207;Parent=HG03009_ch_T0000592;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=exon:HG03009_ch_T0000592:5;Name=RPS4Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	22775085	22775242	.	+	2	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000592;gene_id=HG03009_ch_G0000207;Parent=HG03009_ch_T0000592;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=CDS:HG03009_ch_T0000592:5;Name=RPS4Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	22775243	22776506	.	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000592;gene_id=HG03009_ch_G0000207;Parent=HG03009_ch_T0000592;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=intron:HG03009_ch_T0000592:5;Name=RPS4Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	22776507	22776608	.	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000592;gene_id=HG03009_ch_G0000207;Parent=HG03009_ch_T0000592;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=exon:HG03009_ch_T0000592:6;Name=RPS4Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	22776507	22776608	.	+	0	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000592;gene_id=HG03009_ch_G0000207;Parent=HG03009_ch_T0000592;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=CDS:HG03009_ch_T0000592:6;Name=RPS4Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	22776606	22776608	.	+	0	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000592;gene_id=HG03009_ch_G0000207;Parent=HG03009_ch_T0000592;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=stop_codon:HG03009_ch_T0000592;Name=RPS4Y2;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	23134228	23168576	.	+	.	source_gene_common_name=LOC105377225;source_gene=hg002_chrY_paternal_451;alternative_source_transcripts=hg002_chrY_paternal_451.1,hg002_chrY_paternal_451.1;gene_id=HG03009_ch_G0000208;gene_biotype=lncRNA;gene_name=LOC105377225;gene_sources=liftoff;ID=HG03009_ch_G0000208;Name=LOC105377225
HG03009_chrY	CAT	transcript	23134228	23165821	1000	+	.	source_transcript=hg002_chrY_paternal_451.1;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.1,hg002_chrY_paternal_451.1;transcript_id=HG03009_ch_T0000593;gene_id=HG03009_ch_G0000208;Parent=HG03009_ch_G0000208;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=HG03009_ch_T0000593;Name=LOC105377225
HG03009_chrY	CAT	exon	23134228	23134464	.	+	.	source_transcript=hg002_chrY_paternal_451.1;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.1,hg002_chrY_paternal_451.1;transcript_id=HG03009_ch_T0000593;gene_id=HG03009_ch_G0000208;Parent=HG03009_ch_T0000593;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03009_ch_T0000593:0;Name=LOC105377225;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23134465	23143774	.	+	.	source_transcript=hg002_chrY_paternal_451.1;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.1,hg002_chrY_paternal_451.1;transcript_id=HG03009_ch_T0000593;gene_id=HG03009_ch_G0000208;Parent=HG03009_ch_T0000593;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG03009_ch_T0000593:0;Name=LOC105377225;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23143775	23143825	.	+	.	source_transcript=hg002_chrY_paternal_451.1;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.1,hg002_chrY_paternal_451.1;transcript_id=HG03009_ch_T0000593;gene_id=HG03009_ch_G0000208;Parent=HG03009_ch_T0000593;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03009_ch_T0000593:1;Name=LOC105377225;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23143826	23144017	.	+	.	source_transcript=hg002_chrY_paternal_451.1;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.1,hg002_chrY_paternal_451.1;transcript_id=HG03009_ch_T0000593;gene_id=HG03009_ch_G0000208;Parent=HG03009_ch_T0000593;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG03009_ch_T0000593:1;Name=LOC105377225;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23144018	23144112	.	+	.	source_transcript=hg002_chrY_paternal_451.1;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.1,hg002_chrY_paternal_451.1;transcript_id=HG03009_ch_T0000593;gene_id=HG03009_ch_G0000208;Parent=HG03009_ch_T0000593;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03009_ch_T0000593:2;Name=LOC105377225;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23144113	23147183	.	+	.	source_transcript=hg002_chrY_paternal_451.1;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.1,hg002_chrY_paternal_451.1;transcript_id=HG03009_ch_T0000593;gene_id=HG03009_ch_G0000208;Parent=HG03009_ch_T0000593;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG03009_ch_T0000593:2;Name=LOC105377225;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23147184	23147237	.	+	.	source_transcript=hg002_chrY_paternal_451.1;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.1,hg002_chrY_paternal_451.1;transcript_id=HG03009_ch_T0000593;gene_id=HG03009_ch_G0000208;Parent=HG03009_ch_T0000593;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03009_ch_T0000593:3;Name=LOC105377225;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23147238	23148433	.	+	.	source_transcript=hg002_chrY_paternal_451.1;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.1,hg002_chrY_paternal_451.1;transcript_id=HG03009_ch_T0000593;gene_id=HG03009_ch_G0000208;Parent=HG03009_ch_T0000593;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG03009_ch_T0000593:3;Name=LOC105377225;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23148434	23148568	.	+	.	source_transcript=hg002_chrY_paternal_451.1;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.1,hg002_chrY_paternal_451.1;transcript_id=HG03009_ch_T0000593;gene_id=HG03009_ch_G0000208;Parent=HG03009_ch_T0000593;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03009_ch_T0000593:4;Name=LOC105377225;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23148569	23165557	.	+	.	source_transcript=hg002_chrY_paternal_451.1;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.1,hg002_chrY_paternal_451.1;transcript_id=HG03009_ch_T0000593;gene_id=HG03009_ch_G0000208;Parent=HG03009_ch_T0000593;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG03009_ch_T0000593:4;Name=LOC105377225;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23165558	23165821	.	+	.	source_transcript=hg002_chrY_paternal_451.1;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.1,hg002_chrY_paternal_451.1;transcript_id=HG03009_ch_T0000593;gene_id=HG03009_ch_G0000208;Parent=HG03009_ch_T0000593;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03009_ch_T0000593:5;Name=LOC105377225;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	23134228	23165821	1000	+	.	source_transcript=hg002_chrY_paternal_451.2;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.2,hg002_chrY_paternal_451.2;transcript_id=HG03009_ch_T0000594;gene_id=HG03009_ch_G0000208;Parent=HG03009_ch_G0000208;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=HG03009_ch_T0000594;Name=LOC105377225
HG03009_chrY	CAT	exon	23134228	23134464	.	+	.	source_transcript=hg002_chrY_paternal_451.2;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.2,hg002_chrY_paternal_451.2;transcript_id=HG03009_ch_T0000594;gene_id=HG03009_ch_G0000208;Parent=HG03009_ch_T0000594;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03009_ch_T0000594:0;Name=LOC105377225;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23134465	23144017	.	+	.	source_transcript=hg002_chrY_paternal_451.2;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.2,hg002_chrY_paternal_451.2;transcript_id=HG03009_ch_T0000594;gene_id=HG03009_ch_G0000208;Parent=HG03009_ch_T0000594;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG03009_ch_T0000594:0;Name=LOC105377225;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23144018	23144112	.	+	.	source_transcript=hg002_chrY_paternal_451.2;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.2,hg002_chrY_paternal_451.2;transcript_id=HG03009_ch_T0000594;gene_id=HG03009_ch_G0000208;Parent=HG03009_ch_T0000594;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03009_ch_T0000594:1;Name=LOC105377225;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23144113	23147183	.	+	.	source_transcript=hg002_chrY_paternal_451.2;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.2,hg002_chrY_paternal_451.2;transcript_id=HG03009_ch_T0000594;gene_id=HG03009_ch_G0000208;Parent=HG03009_ch_T0000594;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG03009_ch_T0000594:1;Name=LOC105377225;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23147184	23147237	.	+	.	source_transcript=hg002_chrY_paternal_451.2;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.2,hg002_chrY_paternal_451.2;transcript_id=HG03009_ch_T0000594;gene_id=HG03009_ch_G0000208;Parent=HG03009_ch_T0000594;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03009_ch_T0000594:2;Name=LOC105377225;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23147238	23148433	.	+	.	source_transcript=hg002_chrY_paternal_451.2;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.2,hg002_chrY_paternal_451.2;transcript_id=HG03009_ch_T0000594;gene_id=HG03009_ch_G0000208;Parent=HG03009_ch_T0000594;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG03009_ch_T0000594:2;Name=LOC105377225;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23148434	23148568	.	+	.	source_transcript=hg002_chrY_paternal_451.2;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.2,hg002_chrY_paternal_451.2;transcript_id=HG03009_ch_T0000594;gene_id=HG03009_ch_G0000208;Parent=HG03009_ch_T0000594;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03009_ch_T0000594:3;Name=LOC105377225;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23148569	23165557	.	+	.	source_transcript=hg002_chrY_paternal_451.2;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.2,hg002_chrY_paternal_451.2;transcript_id=HG03009_ch_T0000594;gene_id=HG03009_ch_G0000208;Parent=HG03009_ch_T0000594;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG03009_ch_T0000594:3;Name=LOC105377225;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23165558	23165821	.	+	.	source_transcript=hg002_chrY_paternal_451.2;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.2,hg002_chrY_paternal_451.2;transcript_id=HG03009_ch_T0000594;gene_id=HG03009_ch_G0000208;Parent=HG03009_ch_T0000594;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03009_ch_T0000594:4;Name=LOC105377225;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	23134228	23165821	1000	+	.	source_transcript=hg002_chrY_paternal_451.3;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.3,hg002_chrY_paternal_451.3;transcript_id=HG03009_ch_T0000595;gene_id=HG03009_ch_G0000208;Parent=HG03009_ch_G0000208;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=HG03009_ch_T0000595;Name=LOC105377225
HG03009_chrY	CAT	exon	23134228	23134464	.	+	.	source_transcript=hg002_chrY_paternal_451.3;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.3,hg002_chrY_paternal_451.3;transcript_id=HG03009_ch_T0000595;gene_id=HG03009_ch_G0000208;Parent=HG03009_ch_T0000595;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03009_ch_T0000595:0;Name=LOC105377225;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23134465	23144140	.	+	.	source_transcript=hg002_chrY_paternal_451.3;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.3,hg002_chrY_paternal_451.3;transcript_id=HG03009_ch_T0000595;gene_id=HG03009_ch_G0000208;Parent=HG03009_ch_T0000595;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG03009_ch_T0000595:0;Name=LOC105377225;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23144141	23144194	.	+	.	source_transcript=hg002_chrY_paternal_451.3;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.3,hg002_chrY_paternal_451.3;transcript_id=HG03009_ch_T0000595;gene_id=HG03009_ch_G0000208;Parent=HG03009_ch_T0000595;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03009_ch_T0000595:1;Name=LOC105377225;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23144195	23147183	.	+	.	source_transcript=hg002_chrY_paternal_451.3;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.3,hg002_chrY_paternal_451.3;transcript_id=HG03009_ch_T0000595;gene_id=HG03009_ch_G0000208;Parent=HG03009_ch_T0000595;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG03009_ch_T0000595:1;Name=LOC105377225;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23147184	23147237	.	+	.	source_transcript=hg002_chrY_paternal_451.3;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.3,hg002_chrY_paternal_451.3;transcript_id=HG03009_ch_T0000595;gene_id=HG03009_ch_G0000208;Parent=HG03009_ch_T0000595;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03009_ch_T0000595:2;Name=LOC105377225;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23147238	23148433	.	+	.	source_transcript=hg002_chrY_paternal_451.3;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.3,hg002_chrY_paternal_451.3;transcript_id=HG03009_ch_T0000595;gene_id=HG03009_ch_G0000208;Parent=HG03009_ch_T0000595;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG03009_ch_T0000595:2;Name=LOC105377225;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23148434	23148568	.	+	.	source_transcript=hg002_chrY_paternal_451.3;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.3,hg002_chrY_paternal_451.3;transcript_id=HG03009_ch_T0000595;gene_id=HG03009_ch_G0000208;Parent=HG03009_ch_T0000595;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03009_ch_T0000595:3;Name=LOC105377225;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23148569	23165557	.	+	.	source_transcript=hg002_chrY_paternal_451.3;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.3,hg002_chrY_paternal_451.3;transcript_id=HG03009_ch_T0000595;gene_id=HG03009_ch_G0000208;Parent=HG03009_ch_T0000595;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG03009_ch_T0000595:3;Name=LOC105377225;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23165558	23165821	.	+	.	source_transcript=hg002_chrY_paternal_451.3;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.3,hg002_chrY_paternal_451.3;transcript_id=HG03009_ch_T0000595;gene_id=HG03009_ch_G0000208;Parent=HG03009_ch_T0000595;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03009_ch_T0000595:4;Name=LOC105377225;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	23134228	23168576	1000	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=HG03009_ch_T0000596;gene_id=HG03009_ch_G0000208;Parent=HG03009_ch_G0000208;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=HG03009_ch_T0000596;Name=LOC105377225
HG03009_chrY	CAT	exon	23134228	23134464	.	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=HG03009_ch_T0000596;gene_id=HG03009_ch_G0000208;Parent=HG03009_ch_T0000596;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03009_ch_T0000596:0;Name=LOC105377225;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23134465	23140378	.	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=HG03009_ch_T0000596;gene_id=HG03009_ch_G0000208;Parent=HG03009_ch_T0000596;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG03009_ch_T0000596:0;Name=LOC105377225;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23140379	23140470	.	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=HG03009_ch_T0000596;gene_id=HG03009_ch_G0000208;Parent=HG03009_ch_T0000596;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03009_ch_T0000596:1;Name=LOC105377225;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23140471	23143774	.	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=HG03009_ch_T0000596;gene_id=HG03009_ch_G0000208;Parent=HG03009_ch_T0000596;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG03009_ch_T0000596:1;Name=LOC105377225;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23143775	23143825	.	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=HG03009_ch_T0000596;gene_id=HG03009_ch_G0000208;Parent=HG03009_ch_T0000596;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03009_ch_T0000596:2;Name=LOC105377225;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23143826	23144017	.	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=HG03009_ch_T0000596;gene_id=HG03009_ch_G0000208;Parent=HG03009_ch_T0000596;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG03009_ch_T0000596:2;Name=LOC105377225;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23144018	23144112	.	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=HG03009_ch_T0000596;gene_id=HG03009_ch_G0000208;Parent=HG03009_ch_T0000596;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03009_ch_T0000596:3;Name=LOC105377225;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23144113	23147183	.	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=HG03009_ch_T0000596;gene_id=HG03009_ch_G0000208;Parent=HG03009_ch_T0000596;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG03009_ch_T0000596:3;Name=LOC105377225;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23147184	23147237	.	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=HG03009_ch_T0000596;gene_id=HG03009_ch_G0000208;Parent=HG03009_ch_T0000596;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03009_ch_T0000596:4;Name=LOC105377225;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23147238	23148433	.	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=HG03009_ch_T0000596;gene_id=HG03009_ch_G0000208;Parent=HG03009_ch_T0000596;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG03009_ch_T0000596:4;Name=LOC105377225;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23148434	23148568	.	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=HG03009_ch_T0000596;gene_id=HG03009_ch_G0000208;Parent=HG03009_ch_T0000596;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03009_ch_T0000596:5;Name=LOC105377225;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23148569	23165557	.	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=HG03009_ch_T0000596;gene_id=HG03009_ch_G0000208;Parent=HG03009_ch_T0000596;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG03009_ch_T0000596:5;Name=LOC105377225;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23165558	23168576	.	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=HG03009_ch_T0000596;gene_id=HG03009_ch_G0000208;Parent=HG03009_ch_T0000596;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03009_ch_T0000596:6;Name=LOC105377225;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	23139638	23165821	1000	+	.	source_transcript=hg002_chrY_paternal_451.5;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.5,hg002_chrY_paternal_451.5;transcript_id=HG03009_ch_T0000597;gene_id=HG03009_ch_G0000208;Parent=HG03009_ch_G0000208;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=HG03009_ch_T0000597;Name=LOC105377225
HG03009_chrY	CAT	exon	23139638	23143825	.	+	.	source_transcript=hg002_chrY_paternal_451.5;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.5,hg002_chrY_paternal_451.5;transcript_id=HG03009_ch_T0000597;gene_id=HG03009_ch_G0000208;Parent=HG03009_ch_T0000597;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03009_ch_T0000597:0;Name=LOC105377225;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23143826	23144017	.	+	.	source_transcript=hg002_chrY_paternal_451.5;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.5,hg002_chrY_paternal_451.5;transcript_id=HG03009_ch_T0000597;gene_id=HG03009_ch_G0000208;Parent=HG03009_ch_T0000597;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG03009_ch_T0000597:0;Name=LOC105377225;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23144018	23144194	.	+	.	source_transcript=hg002_chrY_paternal_451.5;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.5,hg002_chrY_paternal_451.5;transcript_id=HG03009_ch_T0000597;gene_id=HG03009_ch_G0000208;Parent=HG03009_ch_T0000597;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03009_ch_T0000597:1;Name=LOC105377225;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23144195	23147183	.	+	.	source_transcript=hg002_chrY_paternal_451.5;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.5,hg002_chrY_paternal_451.5;transcript_id=HG03009_ch_T0000597;gene_id=HG03009_ch_G0000208;Parent=HG03009_ch_T0000597;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG03009_ch_T0000597:1;Name=LOC105377225;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23147184	23147237	.	+	.	source_transcript=hg002_chrY_paternal_451.5;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.5,hg002_chrY_paternal_451.5;transcript_id=HG03009_ch_T0000597;gene_id=HG03009_ch_G0000208;Parent=HG03009_ch_T0000597;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03009_ch_T0000597:2;Name=LOC105377225;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23147238	23148433	.	+	.	source_transcript=hg002_chrY_paternal_451.5;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.5,hg002_chrY_paternal_451.5;transcript_id=HG03009_ch_T0000597;gene_id=HG03009_ch_G0000208;Parent=HG03009_ch_T0000597;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG03009_ch_T0000597:2;Name=LOC105377225;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23148434	23148568	.	+	.	source_transcript=hg002_chrY_paternal_451.5;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.5,hg002_chrY_paternal_451.5;transcript_id=HG03009_ch_T0000597;gene_id=HG03009_ch_G0000208;Parent=HG03009_ch_T0000597;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03009_ch_T0000597:3;Name=LOC105377225;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23148569	23165557	.	+	.	source_transcript=hg002_chrY_paternal_451.5;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.5,hg002_chrY_paternal_451.5;transcript_id=HG03009_ch_T0000597;gene_id=HG03009_ch_G0000208;Parent=HG03009_ch_T0000597;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG03009_ch_T0000597:3;Name=LOC105377225;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23165558	23165821	.	+	.	source_transcript=hg002_chrY_paternal_451.5;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.5,hg002_chrY_paternal_451.5;transcript_id=HG03009_ch_T0000597;gene_id=HG03009_ch_G0000208;Parent=HG03009_ch_T0000597;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03009_ch_T0000597:4;Name=LOC105377225;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	23139638	23165821	1000	+	.	source_transcript=hg002_chrY_paternal_451.6;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.6;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.6,hg002_chrY_paternal_451.6;transcript_id=HG03009_ch_T0000598;gene_id=HG03009_ch_G0000208;Parent=HG03009_ch_G0000208;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=HG03009_ch_T0000598;Name=LOC105377225
HG03009_chrY	CAT	exon	23139638	23143825	.	+	.	source_transcript=hg002_chrY_paternal_451.6;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.6,hg002_chrY_paternal_451.6;transcript_id=HG03009_ch_T0000598;gene_id=HG03009_ch_G0000208;Parent=HG03009_ch_T0000598;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03009_ch_T0000598:0;Name=LOC105377225;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23143826	23144140	.	+	.	source_transcript=hg002_chrY_paternal_451.6;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.6,hg002_chrY_paternal_451.6;transcript_id=HG03009_ch_T0000598;gene_id=HG03009_ch_G0000208;Parent=HG03009_ch_T0000598;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG03009_ch_T0000598:0;Name=LOC105377225;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23144141	23144194	.	+	.	source_transcript=hg002_chrY_paternal_451.6;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.6,hg002_chrY_paternal_451.6;transcript_id=HG03009_ch_T0000598;gene_id=HG03009_ch_G0000208;Parent=HG03009_ch_T0000598;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03009_ch_T0000598:1;Name=LOC105377225;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23144195	23147183	.	+	.	source_transcript=hg002_chrY_paternal_451.6;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.6,hg002_chrY_paternal_451.6;transcript_id=HG03009_ch_T0000598;gene_id=HG03009_ch_G0000208;Parent=HG03009_ch_T0000598;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG03009_ch_T0000598:1;Name=LOC105377225;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23147184	23147237	.	+	.	source_transcript=hg002_chrY_paternal_451.6;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.6,hg002_chrY_paternal_451.6;transcript_id=HG03009_ch_T0000598;gene_id=HG03009_ch_G0000208;Parent=HG03009_ch_T0000598;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03009_ch_T0000598:2;Name=LOC105377225;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23147238	23148433	.	+	.	source_transcript=hg002_chrY_paternal_451.6;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.6,hg002_chrY_paternal_451.6;transcript_id=HG03009_ch_T0000598;gene_id=HG03009_ch_G0000208;Parent=HG03009_ch_T0000598;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG03009_ch_T0000598:2;Name=LOC105377225;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23148434	23148568	.	+	.	source_transcript=hg002_chrY_paternal_451.6;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.6,hg002_chrY_paternal_451.6;transcript_id=HG03009_ch_T0000598;gene_id=HG03009_ch_G0000208;Parent=HG03009_ch_T0000598;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03009_ch_T0000598:3;Name=LOC105377225;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23148569	23165557	.	+	.	source_transcript=hg002_chrY_paternal_451.6;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.6,hg002_chrY_paternal_451.6;transcript_id=HG03009_ch_T0000598;gene_id=HG03009_ch_G0000208;Parent=HG03009_ch_T0000598;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG03009_ch_T0000598:3;Name=LOC105377225;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23165558	23165821	.	+	.	source_transcript=hg002_chrY_paternal_451.6;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.6,hg002_chrY_paternal_451.6;transcript_id=HG03009_ch_T0000598;gene_id=HG03009_ch_G0000208;Parent=HG03009_ch_T0000598;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03009_ch_T0000598:4;Name=LOC105377225;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	23139638	23165821	1000	+	.	source_transcript=hg002_chrY_paternal_451.7;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.7;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.7,hg002_chrY_paternal_451.7;transcript_id=HG03009_ch_T0000599;gene_id=HG03009_ch_G0000208;Parent=HG03009_ch_G0000208;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=HG03009_ch_T0000599;Name=LOC105377225
HG03009_chrY	CAT	exon	23139638	23143825	.	+	.	source_transcript=hg002_chrY_paternal_451.7;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.7,hg002_chrY_paternal_451.7;transcript_id=HG03009_ch_T0000599;gene_id=HG03009_ch_G0000208;Parent=HG03009_ch_T0000599;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03009_ch_T0000599:0;Name=LOC105377225;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23143826	23144017	.	+	.	source_transcript=hg002_chrY_paternal_451.7;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.7,hg002_chrY_paternal_451.7;transcript_id=HG03009_ch_T0000599;gene_id=HG03009_ch_G0000208;Parent=HG03009_ch_T0000599;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG03009_ch_T0000599:0;Name=LOC105377225;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23144018	23144194	.	+	.	source_transcript=hg002_chrY_paternal_451.7;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.7,hg002_chrY_paternal_451.7;transcript_id=HG03009_ch_T0000599;gene_id=HG03009_ch_G0000208;Parent=HG03009_ch_T0000599;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03009_ch_T0000599:1;Name=LOC105377225;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23144195	23147183	.	+	.	source_transcript=hg002_chrY_paternal_451.7;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.7,hg002_chrY_paternal_451.7;transcript_id=HG03009_ch_T0000599;gene_id=HG03009_ch_G0000208;Parent=HG03009_ch_T0000599;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG03009_ch_T0000599:1;Name=LOC105377225;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23147184	23147237	.	+	.	source_transcript=hg002_chrY_paternal_451.7;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.7,hg002_chrY_paternal_451.7;transcript_id=HG03009_ch_T0000599;gene_id=HG03009_ch_G0000208;Parent=HG03009_ch_T0000599;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03009_ch_T0000599:2;Name=LOC105377225;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23147238	23148274	.	+	.	source_transcript=hg002_chrY_paternal_451.7;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.7,hg002_chrY_paternal_451.7;transcript_id=HG03009_ch_T0000599;gene_id=HG03009_ch_G0000208;Parent=HG03009_ch_T0000599;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG03009_ch_T0000599:2;Name=LOC105377225;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23148275	23148366	.	+	.	source_transcript=hg002_chrY_paternal_451.7;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.7,hg002_chrY_paternal_451.7;transcript_id=HG03009_ch_T0000599;gene_id=HG03009_ch_G0000208;Parent=HG03009_ch_T0000599;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03009_ch_T0000599:3;Name=LOC105377225;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23148367	23165557	.	+	.	source_transcript=hg002_chrY_paternal_451.7;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.7,hg002_chrY_paternal_451.7;transcript_id=HG03009_ch_T0000599;gene_id=HG03009_ch_G0000208;Parent=HG03009_ch_T0000599;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG03009_ch_T0000599:3;Name=LOC105377225;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23165558	23165821	.	+	.	source_transcript=hg002_chrY_paternal_451.7;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.7,hg002_chrY_paternal_451.7;transcript_id=HG03009_ch_T0000599;gene_id=HG03009_ch_G0000208;Parent=HG03009_ch_T0000599;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03009_ch_T0000599:4;Name=LOC105377225;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	23223739	23248975	.	+	.	source_gene_common_name=LOC107987346;source_gene=hg002_chrY_paternal_453;alternative_source_transcripts=hg002_chrY_paternal_453.1,hg002_chrY_paternal_453.1;gene_id=HG03009_ch_G0000209;gene_biotype=lncRNA;gene_name=LOC107987346;gene_sources=liftoff;ID=HG03009_ch_G0000209;Name=LOC107987346
HG03009_chrY	CAT	transcript	23223739	23248975	1000	+	.	source_transcript=hg002_chrY_paternal_453.1;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.1,hg002_chrY_paternal_453.1;transcript_id=HG03009_ch_T0000600;gene_id=HG03009_ch_G0000209;Parent=HG03009_ch_G0000209;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=HG03009_ch_T0000600;Name=LOC107987346
HG03009_chrY	CAT	exon	23223739	23223776	.	+	.	source_transcript=hg002_chrY_paternal_453.1;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.1,hg002_chrY_paternal_453.1;transcript_id=HG03009_ch_T0000600;gene_id=HG03009_ch_G0000209;Parent=HG03009_ch_T0000600;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=exon:HG03009_ch_T0000600:0;Name=LOC107987346;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23223777	23223953	.	+	.	source_transcript=hg002_chrY_paternal_453.1;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.1,hg002_chrY_paternal_453.1;transcript_id=HG03009_ch_T0000600;gene_id=HG03009_ch_G0000209;Parent=HG03009_ch_T0000600;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=intron:HG03009_ch_T0000600:0;Name=LOC107987346;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23223954	23224061	.	+	.	source_transcript=hg002_chrY_paternal_453.1;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.1,hg002_chrY_paternal_453.1;transcript_id=HG03009_ch_T0000600;gene_id=HG03009_ch_G0000209;Parent=HG03009_ch_T0000600;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=exon:HG03009_ch_T0000600:1;Name=LOC107987346;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23224062	23246150	.	+	.	source_transcript=hg002_chrY_paternal_453.1;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.1,hg002_chrY_paternal_453.1;transcript_id=HG03009_ch_T0000600;gene_id=HG03009_ch_G0000209;Parent=HG03009_ch_T0000600;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=intron:HG03009_ch_T0000600:1;Name=LOC107987346;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23246151	23248975	.	+	.	source_transcript=hg002_chrY_paternal_453.1;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.1,hg002_chrY_paternal_453.1;transcript_id=HG03009_ch_T0000600;gene_id=HG03009_ch_G0000209;Parent=HG03009_ch_T0000600;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=exon:HG03009_ch_T0000600:2;Name=LOC107987346;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	23223739	23248975	1000	+	.	source_transcript=hg002_chrY_paternal_453.2;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.2,hg002_chrY_paternal_453.2;transcript_id=HG03009_ch_T0000601;gene_id=HG03009_ch_G0000209;Parent=HG03009_ch_G0000209;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=HG03009_ch_T0000601;Name=LOC107987346
HG03009_chrY	CAT	exon	23223739	23223776	.	+	.	source_transcript=hg002_chrY_paternal_453.2;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.2,hg002_chrY_paternal_453.2;transcript_id=HG03009_ch_T0000601;gene_id=HG03009_ch_G0000209;Parent=HG03009_ch_T0000601;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=exon:HG03009_ch_T0000601:0;Name=LOC107987346;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23223777	23223953	.	+	.	source_transcript=hg002_chrY_paternal_453.2;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.2,hg002_chrY_paternal_453.2;transcript_id=HG03009_ch_T0000601;gene_id=HG03009_ch_G0000209;Parent=HG03009_ch_T0000601;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=intron:HG03009_ch_T0000601:0;Name=LOC107987346;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23223954	23224061	.	+	.	source_transcript=hg002_chrY_paternal_453.2;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.2,hg002_chrY_paternal_453.2;transcript_id=HG03009_ch_T0000601;gene_id=HG03009_ch_G0000209;Parent=HG03009_ch_T0000601;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=exon:HG03009_ch_T0000601:1;Name=LOC107987346;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23224062	23246150	.	+	.	source_transcript=hg002_chrY_paternal_453.2;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.2,hg002_chrY_paternal_453.2;transcript_id=HG03009_ch_T0000601;gene_id=HG03009_ch_G0000209;Parent=HG03009_ch_T0000601;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=intron:HG03009_ch_T0000601:1;Name=LOC107987346;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23246151	23246309	.	+	.	source_transcript=hg002_chrY_paternal_453.2;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.2,hg002_chrY_paternal_453.2;transcript_id=HG03009_ch_T0000601;gene_id=HG03009_ch_G0000209;Parent=HG03009_ch_T0000601;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=exon:HG03009_ch_T0000601:2;Name=LOC107987346;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23246310	23248723	.	+	.	source_transcript=hg002_chrY_paternal_453.2;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.2,hg002_chrY_paternal_453.2;transcript_id=HG03009_ch_T0000601;gene_id=HG03009_ch_G0000209;Parent=HG03009_ch_T0000601;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=intron:HG03009_ch_T0000601:2;Name=LOC107987346;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23248724	23248975	.	+	.	source_transcript=hg002_chrY_paternal_453.2;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.2,hg002_chrY_paternal_453.2;transcript_id=HG03009_ch_T0000601;gene_id=HG03009_ch_G0000209;Parent=HG03009_ch_T0000601;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=exon:HG03009_ch_T0000601:3;Name=LOC107987346;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	23243666	23298606	.	-	.	source_gene_common_name=LOC107987347;source_gene=hg002_chrY_paternal_454;alternative_source_transcripts=hg002_chrY_paternal_454.1,hg002_chrY_paternal_454.1;gene_id=HG03009_ch_G0000210;gene_biotype=lncRNA;gene_name=LOC107987347;gene_sources=liftoff;ID=HG03009_ch_G0000210;Name=LOC107987347
HG03009_chrY	CAT	transcript	23243666	23298606	1000	-	.	source_transcript=hg002_chrY_paternal_454.1;source_transcript_name=hg002_chrY_paternal_454.1;source_gene=hg002_chrY_paternal_454;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_454;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_454.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_454.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987347;alternative_source_transcripts=hg002_chrY_paternal_454.1,hg002_chrY_paternal_454.1;transcript_id=HG03009_ch_T0000602;gene_id=HG03009_ch_G0000210;Parent=HG03009_ch_G0000210;transcript_name=hg002_chrY_paternal_454.1;gene_name=LOC107987347;ID=HG03009_ch_T0000602;Name=LOC107987347
HG03009_chrY	CAT	exon	23243666	23244751	.	-	.	source_transcript=hg002_chrY_paternal_454.1;source_transcript_name=hg002_chrY_paternal_454.1;source_gene=hg002_chrY_paternal_454;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_454;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_454.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_454.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987347;alternative_source_transcripts=hg002_chrY_paternal_454.1,hg002_chrY_paternal_454.1;transcript_id=HG03009_ch_T0000602;gene_id=HG03009_ch_G0000210;Parent=HG03009_ch_T0000602;transcript_name=hg002_chrY_paternal_454.1;gene_name=LOC107987347;ID=exon:HG03009_ch_T0000602:0;Name=LOC107987347;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23244752	23291750	.	-	.	source_transcript=hg002_chrY_paternal_454.1;source_transcript_name=hg002_chrY_paternal_454.1;source_gene=hg002_chrY_paternal_454;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_454;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_454.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_454.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987347;alternative_source_transcripts=hg002_chrY_paternal_454.1,hg002_chrY_paternal_454.1;transcript_id=HG03009_ch_T0000602;gene_id=HG03009_ch_G0000210;Parent=HG03009_ch_T0000602;transcript_name=hg002_chrY_paternal_454.1;gene_name=LOC107987347;ID=intron:HG03009_ch_T0000602:0;Name=LOC107987347;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23291751	23291816	.	-	.	source_transcript=hg002_chrY_paternal_454.1;source_transcript_name=hg002_chrY_paternal_454.1;source_gene=hg002_chrY_paternal_454;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_454;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_454.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_454.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987347;alternative_source_transcripts=hg002_chrY_paternal_454.1,hg002_chrY_paternal_454.1;transcript_id=HG03009_ch_T0000602;gene_id=HG03009_ch_G0000210;Parent=HG03009_ch_T0000602;transcript_name=hg002_chrY_paternal_454.1;gene_name=LOC107987347;ID=exon:HG03009_ch_T0000602:1;Name=LOC107987347;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23291817	23298156	.	-	.	source_transcript=hg002_chrY_paternal_454.1;source_transcript_name=hg002_chrY_paternal_454.1;source_gene=hg002_chrY_paternal_454;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_454;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_454.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_454.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987347;alternative_source_transcripts=hg002_chrY_paternal_454.1,hg002_chrY_paternal_454.1;transcript_id=HG03009_ch_T0000602;gene_id=HG03009_ch_G0000210;Parent=HG03009_ch_T0000602;transcript_name=hg002_chrY_paternal_454.1;gene_name=LOC107987347;ID=intron:HG03009_ch_T0000602:1;Name=LOC107987347;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23298157	23298606	.	-	.	source_transcript=hg002_chrY_paternal_454.1;source_transcript_name=hg002_chrY_paternal_454.1;source_gene=hg002_chrY_paternal_454;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_454;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_454.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_454.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987347;alternative_source_transcripts=hg002_chrY_paternal_454.1,hg002_chrY_paternal_454.1;transcript_id=HG03009_ch_T0000602;gene_id=HG03009_ch_G0000210;Parent=HG03009_ch_T0000602;transcript_name=hg002_chrY_paternal_454.1;gene_name=LOC107987347;ID=exon:HG03009_ch_T0000602:2;Name=LOC107987347;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	23377503	23447445	.	-	.	source_gene_common_name=PRORY;source_gene=hg002_chrY_paternal_456;alternative_source_transcripts=hg002_chrY_paternal_456.1,hg002_chrY_paternal_456.1;gene_id=HG03009_ch_G0000211;gene_biotype=lncRNA;gene_name=PRORY;gene_sources=liftoff;ID=HG03009_ch_G0000211;Name=PRORY
HG03009_chrY	CAT	transcript	23377503	23447445	1000	-	.	source_transcript=hg002_chrY_paternal_456.1;source_transcript_name=hg002_chrY_paternal_456.1;source_gene=hg002_chrY_paternal_456;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_456;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_456.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_456.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=hg002_chrY_paternal_456.1,hg002_chrY_paternal_456.1;transcript_id=HG03009_ch_T0000603;gene_id=HG03009_ch_G0000211;Parent=HG03009_ch_G0000211;transcript_name=hg002_chrY_paternal_456.1;gene_name=PRORY;ID=HG03009_ch_T0000603;Name=PRORY
HG03009_chrY	CAT	exon	23377503	23378878	.	-	.	source_transcript=hg002_chrY_paternal_456.1;source_transcript_name=hg002_chrY_paternal_456.1;source_gene=hg002_chrY_paternal_456;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_456;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_456.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_456.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=hg002_chrY_paternal_456.1,hg002_chrY_paternal_456.1;transcript_id=HG03009_ch_T0000603;gene_id=HG03009_ch_G0000211;Parent=HG03009_ch_T0000603;transcript_name=hg002_chrY_paternal_456.1;gene_name=PRORY;ID=exon:HG03009_ch_T0000603:0;Name=PRORY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23378879	23379029	.	-	.	source_transcript=hg002_chrY_paternal_456.1;source_transcript_name=hg002_chrY_paternal_456.1;source_gene=hg002_chrY_paternal_456;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_456;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_456.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_456.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=hg002_chrY_paternal_456.1,hg002_chrY_paternal_456.1;transcript_id=HG03009_ch_T0000603;gene_id=HG03009_ch_G0000211;Parent=HG03009_ch_T0000603;transcript_name=hg002_chrY_paternal_456.1;gene_name=PRORY;ID=intron:HG03009_ch_T0000603:0;Name=PRORY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23379030	23379394	.	-	.	source_transcript=hg002_chrY_paternal_456.1;source_transcript_name=hg002_chrY_paternal_456.1;source_gene=hg002_chrY_paternal_456;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_456;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_456.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_456.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=hg002_chrY_paternal_456.1,hg002_chrY_paternal_456.1;transcript_id=HG03009_ch_T0000603;gene_id=HG03009_ch_G0000211;Parent=HG03009_ch_T0000603;transcript_name=hg002_chrY_paternal_456.1;gene_name=PRORY;ID=exon:HG03009_ch_T0000603:1;Name=PRORY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23379395	23379510	.	-	.	source_transcript=hg002_chrY_paternal_456.1;source_transcript_name=hg002_chrY_paternal_456.1;source_gene=hg002_chrY_paternal_456;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_456;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_456.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_456.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=hg002_chrY_paternal_456.1,hg002_chrY_paternal_456.1;transcript_id=HG03009_ch_T0000603;gene_id=HG03009_ch_G0000211;Parent=HG03009_ch_T0000603;transcript_name=hg002_chrY_paternal_456.1;gene_name=PRORY;ID=intron:HG03009_ch_T0000603:1;Name=PRORY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23379511	23379567	.	-	.	source_transcript=hg002_chrY_paternal_456.1;source_transcript_name=hg002_chrY_paternal_456.1;source_gene=hg002_chrY_paternal_456;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_456;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_456.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_456.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=hg002_chrY_paternal_456.1,hg002_chrY_paternal_456.1;transcript_id=HG03009_ch_T0000603;gene_id=HG03009_ch_G0000211;Parent=HG03009_ch_T0000603;transcript_name=hg002_chrY_paternal_456.1;gene_name=PRORY;ID=exon:HG03009_ch_T0000603:2;Name=PRORY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23379568	23381829	.	-	.	source_transcript=hg002_chrY_paternal_456.1;source_transcript_name=hg002_chrY_paternal_456.1;source_gene=hg002_chrY_paternal_456;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_456;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_456.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_456.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=hg002_chrY_paternal_456.1,hg002_chrY_paternal_456.1;transcript_id=HG03009_ch_T0000603;gene_id=HG03009_ch_G0000211;Parent=HG03009_ch_T0000603;transcript_name=hg002_chrY_paternal_456.1;gene_name=PRORY;ID=intron:HG03009_ch_T0000603:2;Name=PRORY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23381830	23381954	.	-	.	source_transcript=hg002_chrY_paternal_456.1;source_transcript_name=hg002_chrY_paternal_456.1;source_gene=hg002_chrY_paternal_456;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_456;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_456.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_456.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=hg002_chrY_paternal_456.1,hg002_chrY_paternal_456.1;transcript_id=HG03009_ch_T0000603;gene_id=HG03009_ch_G0000211;Parent=HG03009_ch_T0000603;transcript_name=hg002_chrY_paternal_456.1;gene_name=PRORY;ID=exon:HG03009_ch_T0000603:3;Name=PRORY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23381955	23447242	.	-	.	source_transcript=hg002_chrY_paternal_456.1;source_transcript_name=hg002_chrY_paternal_456.1;source_gene=hg002_chrY_paternal_456;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_456;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_456.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_456.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=hg002_chrY_paternal_456.1,hg002_chrY_paternal_456.1;transcript_id=HG03009_ch_T0000603;gene_id=HG03009_ch_G0000211;Parent=HG03009_ch_T0000603;transcript_name=hg002_chrY_paternal_456.1;gene_name=PRORY;ID=intron:HG03009_ch_T0000603:3;Name=PRORY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23447243	23447445	.	-	.	source_transcript=hg002_chrY_paternal_456.1;source_transcript_name=hg002_chrY_paternal_456.1;source_gene=hg002_chrY_paternal_456;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_456;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_456.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_456.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=hg002_chrY_paternal_456.1,hg002_chrY_paternal_456.1;transcript_id=HG03009_ch_T0000603;gene_id=HG03009_ch_G0000211;Parent=HG03009_ch_T0000603;transcript_name=hg002_chrY_paternal_456.1;gene_name=PRORY;ID=exon:HG03009_ch_T0000603:4;Name=PRORY;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	23390746	23397160	.	-	.	source_gene_common_name=RBMY2EP;source_gene=hg002_chrY_paternal_457;alternative_source_transcripts=hg002_chrY_paternal_457.1,hg002_chrY_paternal_457.1;gene_id=HG03009_ch_G0000212;gene_biotype=transcribed_pseudogene;gene_name=RBMY2EP;gene_sources=liftoff;ID=HG03009_ch_G0000212;Name=RBMY2EP
HG03009_chrY	CAT	transcript	23390746	23397160	1000	-	.	source_transcript=hg002_chrY_paternal_457.1;source_transcript_name=hg002_chrY_paternal_457.1;source_gene=hg002_chrY_paternal_457;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_457;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_457.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_457.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;alternative_source_transcripts=hg002_chrY_paternal_457.1,hg002_chrY_paternal_457.1;transcript_id=HG03009_ch_T0000604;gene_id=HG03009_ch_G0000212;Parent=HG03009_ch_G0000212;transcript_name=hg002_chrY_paternal_457.1;gene_name=RBMY2EP;ID=HG03009_ch_T0000604;Name=RBMY2EP
HG03009_chrY	CAT	exon	23390746	23390889	.	-	.	source_transcript=hg002_chrY_paternal_457.1;source_transcript_name=hg002_chrY_paternal_457.1;source_gene=hg002_chrY_paternal_457;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_457;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_457.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_457.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;alternative_source_transcripts=hg002_chrY_paternal_457.1,hg002_chrY_paternal_457.1;transcript_id=HG03009_ch_T0000604;gene_id=HG03009_ch_G0000212;Parent=HG03009_ch_T0000604;transcript_name=hg002_chrY_paternal_457.1;gene_name=RBMY2EP;ID=exon:HG03009_ch_T0000604:0;Name=RBMY2EP;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23390890	23391297	.	-	.	source_transcript=hg002_chrY_paternal_457.1;source_transcript_name=hg002_chrY_paternal_457.1;source_gene=hg002_chrY_paternal_457;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_457;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_457.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_457.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;alternative_source_transcripts=hg002_chrY_paternal_457.1,hg002_chrY_paternal_457.1;transcript_id=HG03009_ch_T0000604;gene_id=HG03009_ch_G0000212;Parent=HG03009_ch_T0000604;transcript_name=hg002_chrY_paternal_457.1;gene_name=RBMY2EP;ID=intron:HG03009_ch_T0000604:0;Name=RBMY2EP;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23391298	23391386	.	-	.	source_transcript=hg002_chrY_paternal_457.1;source_transcript_name=hg002_chrY_paternal_457.1;source_gene=hg002_chrY_paternal_457;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_457;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_457.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_457.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;alternative_source_transcripts=hg002_chrY_paternal_457.1,hg002_chrY_paternal_457.1;transcript_id=HG03009_ch_T0000604;gene_id=HG03009_ch_G0000212;Parent=HG03009_ch_T0000604;transcript_name=hg002_chrY_paternal_457.1;gene_name=RBMY2EP;ID=exon:HG03009_ch_T0000604:1;Name=RBMY2EP;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23391387	23391468	.	-	.	source_transcript=hg002_chrY_paternal_457.1;source_transcript_name=hg002_chrY_paternal_457.1;source_gene=hg002_chrY_paternal_457;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_457;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_457.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_457.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;alternative_source_transcripts=hg002_chrY_paternal_457.1,hg002_chrY_paternal_457.1;transcript_id=HG03009_ch_T0000604;gene_id=HG03009_ch_G0000212;Parent=HG03009_ch_T0000604;transcript_name=hg002_chrY_paternal_457.1;gene_name=RBMY2EP;ID=intron:HG03009_ch_T0000604:1;Name=RBMY2EP;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23391469	23391579	.	-	.	source_transcript=hg002_chrY_paternal_457.1;source_transcript_name=hg002_chrY_paternal_457.1;source_gene=hg002_chrY_paternal_457;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_457;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_457.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_457.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;alternative_source_transcripts=hg002_chrY_paternal_457.1,hg002_chrY_paternal_457.1;transcript_id=HG03009_ch_T0000604;gene_id=HG03009_ch_G0000212;Parent=HG03009_ch_T0000604;transcript_name=hg002_chrY_paternal_457.1;gene_name=RBMY2EP;ID=exon:HG03009_ch_T0000604:2;Name=RBMY2EP;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23391580	23396520	.	-	.	source_transcript=hg002_chrY_paternal_457.1;source_transcript_name=hg002_chrY_paternal_457.1;source_gene=hg002_chrY_paternal_457;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_457;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_457.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_457.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;alternative_source_transcripts=hg002_chrY_paternal_457.1,hg002_chrY_paternal_457.1;transcript_id=HG03009_ch_T0000604;gene_id=HG03009_ch_G0000212;Parent=HG03009_ch_T0000604;transcript_name=hg002_chrY_paternal_457.1;gene_name=RBMY2EP;ID=intron:HG03009_ch_T0000604:2;Name=RBMY2EP;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23396521	23396624	.	-	.	source_transcript=hg002_chrY_paternal_457.1;source_transcript_name=hg002_chrY_paternal_457.1;source_gene=hg002_chrY_paternal_457;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_457;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_457.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_457.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;alternative_source_transcripts=hg002_chrY_paternal_457.1,hg002_chrY_paternal_457.1;transcript_id=HG03009_ch_T0000604;gene_id=HG03009_ch_G0000212;Parent=HG03009_ch_T0000604;transcript_name=hg002_chrY_paternal_457.1;gene_name=RBMY2EP;ID=exon:HG03009_ch_T0000604:3;Name=RBMY2EP;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23396625	23397074	.	-	.	source_transcript=hg002_chrY_paternal_457.1;source_transcript_name=hg002_chrY_paternal_457.1;source_gene=hg002_chrY_paternal_457;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_457;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_457.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_457.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;alternative_source_transcripts=hg002_chrY_paternal_457.1,hg002_chrY_paternal_457.1;transcript_id=HG03009_ch_T0000604;gene_id=HG03009_ch_G0000212;Parent=HG03009_ch_T0000604;transcript_name=hg002_chrY_paternal_457.1;gene_name=RBMY2EP;ID=intron:HG03009_ch_T0000604:3;Name=RBMY2EP;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23397075	23397160	.	-	.	source_transcript=hg002_chrY_paternal_457.1;source_transcript_name=hg002_chrY_paternal_457.1;source_gene=hg002_chrY_paternal_457;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_457;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_457.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_457.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;alternative_source_transcripts=hg002_chrY_paternal_457.1,hg002_chrY_paternal_457.1;transcript_id=HG03009_ch_T0000604;gene_id=HG03009_ch_G0000212;Parent=HG03009_ch_T0000604;transcript_name=hg002_chrY_paternal_457.1;gene_name=RBMY2EP;ID=exon:HG03009_ch_T0000604:4;Name=RBMY2EP;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	23506936	23521382	.	+	.	source_gene_common_name=RBMY1A1;source_gene=hg002_chrY_paternal_462;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;gene_id=HG03009_ch_G0000213;gene_biotype=protein_coding;gene_name=RBMY1A1;gene_sources=liftoff,augTM;ID=HG03009_ch_G0000213;Name=RBMY1A1
HG03009_chrY	CAT	transcript	23506936	23520394	1000	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000605;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_G0000213;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=HG03009_ch_T0000605;Name=RBMY1A1
HG03009_chrY	CAT	exon	23506936	23507083	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000605;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000605;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03009_ch_T0000605:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23507084	23508944	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000605;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000605;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03009_ch_T0000605:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23508945	23509057	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000605;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000605;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03009_ch_T0000605:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23508949	23509057	.	+	0	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000605;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000605;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03009_ch_T0000605:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	23508949	23508951	.	+	0	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000605;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000605;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=start_codon:HG03009_ch_T0000605;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23509058	23509529	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000605;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000605;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03009_ch_T0000605:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23509530	23509633	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000605;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000605;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03009_ch_T0000605:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23509530	23509633	.	+	2	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000605;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000605;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03009_ch_T0000605:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23509634	23512652	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000605;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000605;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03009_ch_T0000605:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23512653	23512830	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000605;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000605;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03009_ch_T0000605:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23512653	23512830	.	+	0	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000605;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000605;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03009_ch_T0000605:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23512831	23514745	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000605;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000605;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03009_ch_T0000605:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23514746	23514898	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000605;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000605;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03009_ch_T0000605:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23514746	23514898	.	+	2	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000605;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000605;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03009_ch_T0000605:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23514899	23516908	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000605;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000605;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03009_ch_T0000605:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23516909	23517023	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000605;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000605;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03009_ch_T0000605:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23516909	23517023	.	+	2	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000605;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000605;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03009_ch_T0000605:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23517024	23517978	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000605;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000605;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03009_ch_T0000605:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23517979	23518089	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000605;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000605;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03009_ch_T0000605:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23517979	23518089	.	+	1	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000605;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000605;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03009_ch_T0000605:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23518090	23518530	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000605;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000605;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03009_ch_T0000605:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23518531	23518641	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000605;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000605;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03009_ch_T0000605:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23518531	23518641	.	+	1	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000605;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000605;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03009_ch_T0000605:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23518642	23519075	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000605;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000605;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03009_ch_T0000605:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23519076	23519186	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000605;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000605;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03009_ch_T0000605:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23519076	23519186	.	+	1	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000605;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000605;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03009_ch_T0000605:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23519187	23520107	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000605;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000605;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03009_ch_T0000605:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23520108	23520218	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000605;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000605;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03009_ch_T0000605:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23520108	23520218	.	+	1	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000605;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000605;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03009_ch_T0000605:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23520219	23520305	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000605;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000605;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03009_ch_T0000605:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23520306	23520394	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000605;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000605;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03009_ch_T0000605:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23520306	23520393	.	+	1	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000605;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000605;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03009_ch_T0000605:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	23520391	23520393	.	+	0	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000605;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000605;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=stop_codon:HG03009_ch_T0000605;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	23506936	23521382	1000	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000606;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_G0000213;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=HG03009_ch_T0000606;Name=RBMY1A1
HG03009_chrY	CAT	exon	23506936	23507083	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000606;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000606;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03009_ch_T0000606:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23507084	23508944	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000606;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000606;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03009_ch_T0000606:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23508945	23509057	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000606;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000606;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03009_ch_T0000606:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23508949	23509057	.	+	0	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000606;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000606;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03009_ch_T0000606:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	23508949	23508951	.	+	0	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000606;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000606;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=start_codon:HG03009_ch_T0000606;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23509058	23509529	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000606;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000606;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03009_ch_T0000606:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23509530	23509633	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000606;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000606;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03009_ch_T0000606:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23509530	23509633	.	+	2	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000606;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000606;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03009_ch_T0000606:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23509634	23512652	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000606;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000606;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03009_ch_T0000606:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23512653	23512830	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000606;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000606;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03009_ch_T0000606:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23512653	23512830	.	+	0	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000606;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000606;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03009_ch_T0000606:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23512831	23514745	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000606;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000606;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03009_ch_T0000606:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23514746	23514898	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000606;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000606;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03009_ch_T0000606:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23514746	23514898	.	+	2	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000606;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000606;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03009_ch_T0000606:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23514899	23516908	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000606;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000606;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03009_ch_T0000606:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23516909	23517023	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000606;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000606;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03009_ch_T0000606:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23516909	23517023	.	+	2	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000606;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000606;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03009_ch_T0000606:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23517024	23517978	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000606;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000606;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03009_ch_T0000606:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23517979	23518089	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000606;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000606;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03009_ch_T0000606:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23517979	23518089	.	+	1	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000606;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000606;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03009_ch_T0000606:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23518090	23518530	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000606;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000606;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03009_ch_T0000606:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23518531	23518641	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000606;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000606;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03009_ch_T0000606:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23518531	23518641	.	+	1	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000606;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000606;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03009_ch_T0000606:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23518642	23519075	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000606;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000606;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03009_ch_T0000606:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23519076	23519186	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000606;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000606;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03009_ch_T0000606:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23519076	23519186	.	+	1	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000606;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000606;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03009_ch_T0000606:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23519187	23520305	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000606;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000606;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03009_ch_T0000606:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23520306	23520394	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000606;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000606;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03009_ch_T0000606:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23520306	23520394	.	+	1	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000606;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000606;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03009_ch_T0000606:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23520395	23520805	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000606;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000606;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03009_ch_T0000606:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23520806	23521382	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000606;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000606;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03009_ch_T0000606:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23520806	23521104	.	+	2	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000606;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000606;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03009_ch_T0000606:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	23521102	23521104	.	+	0	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000606;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000606;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=stop_codon:HG03009_ch_T0000606;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	23506936	23521382	1000	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000607;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_G0000213;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=HG03009_ch_T0000607;Name=RBMY1A1
HG03009_chrY	CAT	exon	23506936	23507083	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000607;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000607;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03009_ch_T0000607:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23507084	23508944	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000607;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000607;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03009_ch_T0000607:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23508945	23509057	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000607;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000607;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03009_ch_T0000607:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23509058	23509529	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000607;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000607;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03009_ch_T0000607:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23509530	23509633	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000607;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000607;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03009_ch_T0000607:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23509634	23514745	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000607;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000607;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03009_ch_T0000607:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23514746	23514898	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000607;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000607;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03009_ch_T0000607:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23514775	23514898	.	+	0	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000607;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000607;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03009_ch_T0000607:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	23514775	23514777	.	+	0	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000607;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000607;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=start_codon:HG03009_ch_T0000607;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23514899	23516908	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000607;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000607;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03009_ch_T0000607:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23516909	23517023	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000607;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000607;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03009_ch_T0000607:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23516909	23517023	.	+	2	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000607;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000607;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03009_ch_T0000607:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23517024	23517978	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000607;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000607;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03009_ch_T0000607:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23517979	23518089	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000607;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000607;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03009_ch_T0000607:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23517979	23518089	.	+	1	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000607;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000607;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03009_ch_T0000607:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23518090	23518530	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000607;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000607;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03009_ch_T0000607:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23518531	23518641	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000607;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000607;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03009_ch_T0000607:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23518531	23518641	.	+	1	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000607;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000607;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03009_ch_T0000607:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23518642	23519075	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000607;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000607;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03009_ch_T0000607:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23519076	23519186	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000607;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000607;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03009_ch_T0000607:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23519076	23519186	.	+	1	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000607;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000607;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03009_ch_T0000607:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23519187	23520107	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000607;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000607;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03009_ch_T0000607:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23520108	23520218	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000607;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000607;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03009_ch_T0000607:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23520108	23520218	.	+	1	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000607;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000607;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03009_ch_T0000607:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23520219	23520305	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000607;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000607;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03009_ch_T0000607:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23520306	23520394	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000607;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000607;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03009_ch_T0000607:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23520306	23520394	.	+	1	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000607;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000607;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03009_ch_T0000607:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23520395	23520805	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000607;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000607;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03009_ch_T0000607:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23520806	23521382	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000607;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000607;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03009_ch_T0000607:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23520806	23521104	.	+	2	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000607;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000607;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03009_ch_T0000607:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	23521102	23521104	.	+	0	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000607;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000607;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=stop_codon:HG03009_ch_T0000607;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	23506936	23521382	1000	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000608;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_G0000213;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=HG03009_ch_T0000608;Name=RBMY1A1
HG03009_chrY	CAT	exon	23506936	23507083	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000608;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000608;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03009_ch_T0000608:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23507084	23508944	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000608;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000608;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03009_ch_T0000608:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23508945	23509057	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000608;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000608;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03009_ch_T0000608:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23508949	23509057	.	+	0	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000608;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000608;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03009_ch_T0000608:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	23508949	23508951	.	+	0	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000608;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000608;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=start_codon:HG03009_ch_T0000608;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23509058	23509529	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000608;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000608;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03009_ch_T0000608:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23509530	23509633	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000608;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000608;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03009_ch_T0000608:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23509530	23509633	.	+	2	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000608;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000608;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03009_ch_T0000608:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23509634	23512652	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000608;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000608;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03009_ch_T0000608:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23512653	23512830	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000608;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000608;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03009_ch_T0000608:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23512653	23512830	.	+	0	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000608;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000608;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03009_ch_T0000608:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23512831	23514745	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000608;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000608;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03009_ch_T0000608:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23514746	23514898	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000608;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000608;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03009_ch_T0000608:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23514746	23514898	.	+	2	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000608;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000608;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03009_ch_T0000608:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23514899	23516908	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000608;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000608;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03009_ch_T0000608:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23516909	23517023	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000608;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000608;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03009_ch_T0000608:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23516909	23517023	.	+	2	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000608;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000608;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03009_ch_T0000608:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23517024	23517978	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000608;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000608;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03009_ch_T0000608:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23517979	23518089	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000608;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000608;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03009_ch_T0000608:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23517979	23518089	.	+	1	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000608;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000608;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03009_ch_T0000608:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23518090	23518530	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000608;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000608;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03009_ch_T0000608:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23518531	23518641	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000608;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000608;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03009_ch_T0000608:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23518531	23518641	.	+	1	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000608;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000608;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03009_ch_T0000608:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23518642	23519075	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000608;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000608;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03009_ch_T0000608:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23519076	23519186	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000608;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000608;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03009_ch_T0000608:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23519076	23519186	.	+	1	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000608;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000608;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03009_ch_T0000608:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23519187	23520107	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000608;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000608;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03009_ch_T0000608:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23520108	23520218	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000608;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000608;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03009_ch_T0000608:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23520108	23520218	.	+	1	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000608;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000608;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03009_ch_T0000608:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23520219	23520305	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000608;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000608;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03009_ch_T0000608:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23520306	23520394	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000608;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000608;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03009_ch_T0000608:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23520306	23520394	.	+	1	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000608;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000608;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03009_ch_T0000608:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23520395	23520805	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000608;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000608;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03009_ch_T0000608:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23520806	23521382	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000608;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000608;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03009_ch_T0000608:11;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23520806	23521104	.	+	2	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000608;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000608;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03009_ch_T0000608:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	23521102	23521104	.	+	0	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000608;gene_id=HG03009_ch_G0000213;Parent=HG03009_ch_T0000608;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=stop_codon:HG03009_ch_T0000608;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	23524254	23556572	.	+	.	source_gene_common_name=RBMY1D;source_gene=hg002_chrY_paternal_463;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;gene_id=HG03009_ch_G0000214;gene_biotype=protein_coding;gene_name=RBMY1D;gene_sources=liftoff,augTM;ID=HG03009_ch_G0000214;Name=RBMY1D
HG03009_chrY	CAT	transcript	23524254	23544922	100	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000609;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_G0000214;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=HG03009_ch_T0000609;Name=RBMY1D
HG03009_chrY	CAT	exon	23524254	23524274	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000609;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000609;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03009_ch_T0000609:0;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23524275	23532482	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000609;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000609;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03009_ch_T0000609:0;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23532483	23532595	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000609;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000609;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03009_ch_T0000609:1;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23532487	23532595	.	+	0	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000609;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000609;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03009_ch_T0000609:0;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	23532487	23532489	.	+	0	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000609;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000609;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=start_codon:HG03009_ch_T0000609;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23532596	23533069	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000609;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000609;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03009_ch_T0000609:1;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23533070	23533173	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000609;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000609;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03009_ch_T0000609:2;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23533070	23533173	.	+	2	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000609;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000609;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03009_ch_T0000609:1;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23533174	23536192	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000609;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000609;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03009_ch_T0000609:2;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23536193	23536370	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000609;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000609;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03009_ch_T0000609:3;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23536193	23536370	.	+	0	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000609;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000609;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03009_ch_T0000609:2;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23536371	23538285	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000609;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000609;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03009_ch_T0000609:3;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23538286	23538438	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000609;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000609;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03009_ch_T0000609:4;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23538286	23538438	.	+	2	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000609;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000609;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03009_ch_T0000609:3;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23538439	23540448	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000609;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000609;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03009_ch_T0000609:4;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23540449	23540563	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000609;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000609;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03009_ch_T0000609:5;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23540449	23540563	.	+	2	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000609;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000609;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03009_ch_T0000609:4;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23540564	23541518	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000609;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000609;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03009_ch_T0000609:5;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23541519	23541629	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000609;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000609;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03009_ch_T0000609:6;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23541519	23541629	.	+	1	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000609;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000609;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03009_ch_T0000609:5;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23541630	23542070	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000609;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000609;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03009_ch_T0000609:6;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23542071	23542181	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000609;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000609;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03009_ch_T0000609:7;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23542071	23542181	.	+	1	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000609;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000609;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03009_ch_T0000609:6;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23542182	23542615	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000609;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000609;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03009_ch_T0000609:7;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23542616	23542726	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000609;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000609;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03009_ch_T0000609:8;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23542616	23542726	.	+	1	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000609;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000609;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03009_ch_T0000609:7;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23542727	23543647	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000609;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000609;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03009_ch_T0000609:8;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23543648	23543758	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000609;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000609;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03009_ch_T0000609:9;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23543648	23543758	.	+	1	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000609;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000609;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03009_ch_T0000609:8;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23543759	23543845	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000609;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000609;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03009_ch_T0000609:9;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23543846	23543934	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000609;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000609;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03009_ch_T0000609:10;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23543846	23543934	.	+	1	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000609;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000609;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03009_ch_T0000609:9;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23543935	23544345	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000609;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000609;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03009_ch_T0000609:10;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23544346	23544922	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000609;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000609;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03009_ch_T0000609:11;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23544346	23544644	.	+	2	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000609;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000609;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03009_ch_T0000609:10;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	23544642	23544644	.	+	0	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000609;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000609;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=stop_codon:HG03009_ch_T0000609;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	23530474	23544922	100	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000610;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_G0000214;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=HG03009_ch_T0000610;Name=RBMY1D
HG03009_chrY	CAT	exon	23530474	23530621	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000610;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000610;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03009_ch_T0000610:0;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23530622	23532482	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000610;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000610;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03009_ch_T0000610:0;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23532483	23532595	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000610;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000610;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03009_ch_T0000610:1;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23532487	23532595	.	+	0	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000610;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000610;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03009_ch_T0000610:0;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	23532487	23532489	.	+	0	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000610;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000610;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=start_codon:HG03009_ch_T0000610;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23532596	23533069	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000610;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000610;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03009_ch_T0000610:1;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23533070	23533173	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000610;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000610;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03009_ch_T0000610:2;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23533070	23533173	.	+	2	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000610;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000610;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03009_ch_T0000610:1;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23533174	23536192	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000610;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000610;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03009_ch_T0000610:2;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23536193	23536370	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000610;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000610;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03009_ch_T0000610:3;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23536193	23536370	.	+	0	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000610;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000610;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03009_ch_T0000610:2;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23536371	23538285	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000610;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000610;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03009_ch_T0000610:3;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23538286	23538438	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000610;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000610;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03009_ch_T0000610:4;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23538286	23538438	.	+	2	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000610;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000610;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03009_ch_T0000610:3;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23538439	23540448	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000610;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000610;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03009_ch_T0000610:4;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23540449	23540563	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000610;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000610;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03009_ch_T0000610:5;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23540449	23540563	.	+	2	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000610;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000610;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03009_ch_T0000610:4;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23540564	23541518	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000610;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000610;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03009_ch_T0000610:5;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23541519	23541629	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000610;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000610;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03009_ch_T0000610:6;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23541519	23541629	.	+	1	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000610;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000610;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03009_ch_T0000610:5;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23541630	23542070	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000610;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000610;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03009_ch_T0000610:6;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23542071	23542181	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000610;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000610;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03009_ch_T0000610:7;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23542071	23542181	.	+	1	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000610;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000610;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03009_ch_T0000610:6;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23542182	23542615	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000610;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000610;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03009_ch_T0000610:7;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23542616	23542726	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000610;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000610;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03009_ch_T0000610:8;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23542616	23542726	.	+	1	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000610;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000610;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03009_ch_T0000610:7;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23542727	23543647	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000610;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000610;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03009_ch_T0000610:8;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23543648	23543758	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000610;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000610;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03009_ch_T0000610:9;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23543648	23543758	.	+	1	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000610;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000610;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03009_ch_T0000610:8;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23543759	23543845	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000610;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000610;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03009_ch_T0000610:9;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23543846	23543934	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000610;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000610;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03009_ch_T0000610:10;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23543846	23543934	.	+	1	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000610;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000610;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03009_ch_T0000610:9;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23543935	23544345	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000610;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000610;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03009_ch_T0000610:10;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23544346	23544922	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000610;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000610;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03009_ch_T0000610:11;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23544346	23544644	.	+	2	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000610;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000610;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03009_ch_T0000610:10;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	23544642	23544644	.	+	0	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000610;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000610;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=stop_codon:HG03009_ch_T0000610;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	23530474	23544922	100	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000611;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_G0000214;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=HG03009_ch_T0000611;Name=RBMY1D
HG03009_chrY	CAT	exon	23530474	23530621	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000611;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000611;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03009_ch_T0000611:0;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23530622	23532482	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000611;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000611;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03009_ch_T0000611:0;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23532483	23532595	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000611;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000611;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03009_ch_T0000611:1;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23532487	23532595	.	+	0	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000611;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000611;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03009_ch_T0000611:0;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	23532487	23532489	.	+	0	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000611;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000611;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=start_codon:HG03009_ch_T0000611;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23532596	23533069	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000611;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000611;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03009_ch_T0000611:1;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23533070	23533173	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000611;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000611;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03009_ch_T0000611:2;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23533070	23533173	.	+	2	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000611;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000611;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03009_ch_T0000611:1;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23533174	23536192	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000611;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000611;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03009_ch_T0000611:2;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23536193	23536370	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000611;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000611;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03009_ch_T0000611:3;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23536193	23536370	.	+	0	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000611;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000611;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03009_ch_T0000611:2;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23536371	23538285	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000611;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000611;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03009_ch_T0000611:3;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23538286	23538438	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000611;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000611;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03009_ch_T0000611:4;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23538286	23538438	.	+	2	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000611;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000611;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03009_ch_T0000611:3;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23538439	23540448	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000611;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000611;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03009_ch_T0000611:4;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23540449	23540563	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000611;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000611;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03009_ch_T0000611:5;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23540449	23540563	.	+	2	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000611;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000611;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03009_ch_T0000611:4;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23540564	23541518	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000611;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000611;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03009_ch_T0000611:5;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23541519	23541629	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000611;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000611;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03009_ch_T0000611:6;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23541519	23541629	.	+	1	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000611;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000611;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03009_ch_T0000611:5;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23541630	23542070	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000611;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000611;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03009_ch_T0000611:6;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23542071	23542181	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000611;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000611;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03009_ch_T0000611:7;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23542071	23542181	.	+	1	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000611;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000611;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03009_ch_T0000611:6;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23542182	23542615	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000611;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000611;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03009_ch_T0000611:7;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23542616	23542726	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000611;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000611;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03009_ch_T0000611:8;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23542616	23542726	.	+	1	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000611;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000611;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03009_ch_T0000611:7;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23542727	23543845	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000611;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000611;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03009_ch_T0000611:8;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23543846	23543934	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000611;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000611;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03009_ch_T0000611:9;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23543846	23543934	.	+	1	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000611;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000611;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03009_ch_T0000611:8;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23543935	23544345	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000611;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000611;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03009_ch_T0000611:9;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23544346	23544922	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000611;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000611;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03009_ch_T0000611:10;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23544346	23544644	.	+	2	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000611;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000611;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03009_ch_T0000611:9;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	23544642	23544644	.	+	0	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000611;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000611;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=stop_codon:HG03009_ch_T0000611;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	23530474	23544922	100	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000612;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_G0000214;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=HG03009_ch_T0000612;Name=RBMY1D
HG03009_chrY	CAT	exon	23530474	23530621	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000612;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000612;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03009_ch_T0000612:0;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23530622	23531294	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000612;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000612;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03009_ch_T0000612:0;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23531295	23531359	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000612;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000612;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03009_ch_T0000612:1;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23531360	23532482	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000612;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000612;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03009_ch_T0000612:1;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23532483	23532595	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000612;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000612;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03009_ch_T0000612:2;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23532545	23532595	.	+	0	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000612;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000612;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03009_ch_T0000612:0;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	23532545	23532547	.	+	0	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000612;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000612;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=start_codon:HG03009_ch_T0000612;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23532596	23533083	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000612;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000612;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03009_ch_T0000612:2;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23533084	23533173	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000612;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000612;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03009_ch_T0000612:3;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23533084	23533173	.	+	0	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000612;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000612;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03009_ch_T0000612:1;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23533174	23536192	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000612;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000612;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03009_ch_T0000612:3;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23536193	23536370	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000612;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000612;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03009_ch_T0000612:4;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23536193	23536370	.	+	0	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000612;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000612;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03009_ch_T0000612:2;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23536371	23538285	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000612;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000612;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03009_ch_T0000612:4;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23538286	23538438	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000612;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000612;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03009_ch_T0000612:5;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23538286	23538438	.	+	2	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000612;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000612;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03009_ch_T0000612:3;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23538439	23540448	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000612;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000612;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03009_ch_T0000612:5;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23540449	23540563	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000612;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000612;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03009_ch_T0000612:6;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23540449	23540563	.	+	2	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000612;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000612;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03009_ch_T0000612:4;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23540564	23541518	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000612;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000612;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03009_ch_T0000612:6;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23541519	23541629	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000612;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000612;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03009_ch_T0000612:7;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23541519	23541629	.	+	1	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000612;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000612;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03009_ch_T0000612:5;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23541630	23542070	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000612;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000612;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03009_ch_T0000612:7;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23542071	23542181	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000612;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000612;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03009_ch_T0000612:8;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23542071	23542181	.	+	1	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000612;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000612;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03009_ch_T0000612:6;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23542182	23542615	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000612;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000612;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03009_ch_T0000612:8;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23542616	23542726	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000612;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000612;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03009_ch_T0000612:9;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23542616	23542726	.	+	1	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000612;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000612;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03009_ch_T0000612:7;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23542727	23543845	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000612;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000612;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03009_ch_T0000612:9;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23543846	23543934	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000612;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000612;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03009_ch_T0000612:10;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23543846	23543934	.	+	1	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000612;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000612;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03009_ch_T0000612:8;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23543935	23544345	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000612;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000612;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03009_ch_T0000612:10;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23544346	23544922	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000612;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000612;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03009_ch_T0000612:11;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23544346	23544644	.	+	2	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000612;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000612;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03009_ch_T0000612:9;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	23544642	23544644	.	+	0	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000612;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000612;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=stop_codon:HG03009_ch_T0000612;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	23530474	23544922	100	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000613;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_G0000214;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=HG03009_ch_T0000613;Name=RBMY1D
HG03009_chrY	CAT	exon	23530474	23530621	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000613;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000613;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03009_ch_T0000613:0;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23530622	23532482	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000613;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000613;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03009_ch_T0000613:0;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23532483	23532595	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000613;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000613;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03009_ch_T0000613:1;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23532487	23532595	.	+	0	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000613;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000613;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03009_ch_T0000613:0;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	23532487	23532489	.	+	0	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000613;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000613;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=start_codon:HG03009_ch_T0000613;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23532596	23533069	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000613;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000613;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03009_ch_T0000613:1;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23533070	23533173	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000613;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000613;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03009_ch_T0000613:2;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23533070	23533173	.	+	2	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000613;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000613;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03009_ch_T0000613:1;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23533174	23536192	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000613;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000613;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03009_ch_T0000613:2;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23536193	23536370	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000613;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000613;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03009_ch_T0000613:3;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23536193	23536370	.	+	0	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000613;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000613;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03009_ch_T0000613:2;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23536371	23538285	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000613;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000613;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03009_ch_T0000613:3;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23538286	23538438	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000613;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000613;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03009_ch_T0000613:4;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23538286	23538438	.	+	2	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000613;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000613;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03009_ch_T0000613:3;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23538439	23540448	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000613;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000613;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03009_ch_T0000613:4;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23540449	23540563	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000613;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000613;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03009_ch_T0000613:5;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23540449	23540563	.	+	2	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000613;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000613;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03009_ch_T0000613:4;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23540564	23541518	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000613;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000613;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03009_ch_T0000613:5;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23541519	23541629	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000613;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000613;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03009_ch_T0000613:6;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23541519	23541629	.	+	1	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000613;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000613;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03009_ch_T0000613:5;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23541630	23543845	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000613;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000613;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03009_ch_T0000613:6;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23543846	23543934	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000613;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000613;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03009_ch_T0000613:7;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23543846	23543934	.	+	1	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000613;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000613;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03009_ch_T0000613:6;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23543935	23544345	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000613;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000613;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03009_ch_T0000613:7;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23544346	23544922	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000613;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000613;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03009_ch_T0000613:8;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23544346	23544644	.	+	2	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000613;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000613;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03009_ch_T0000613:7;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	23544642	23544644	.	+	0	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000613;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000613;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=stop_codon:HG03009_ch_T0000613;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	23530474	23546340	100	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000614;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_G0000214;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=HG03009_ch_T0000614;Name=RBMY1D
HG03009_chrY	CAT	exon	23530474	23530621	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000614;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000614;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03009_ch_T0000614:0;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23530622	23532482	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000614;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000614;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03009_ch_T0000614:0;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23532483	23532595	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000614;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000614;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03009_ch_T0000614:1;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23532487	23532595	.	+	0	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000614;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000614;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03009_ch_T0000614:0;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	23532487	23532489	.	+	0	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000614;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000614;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=start_codon:HG03009_ch_T0000614;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23532596	23533069	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000614;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000614;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03009_ch_T0000614:1;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23533070	23533173	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000614;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000614;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03009_ch_T0000614:2;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23533070	23533173	.	+	2	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000614;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000614;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03009_ch_T0000614:1;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23533174	23536192	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000614;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000614;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03009_ch_T0000614:2;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23536193	23536370	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000614;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000614;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03009_ch_T0000614:3;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23536193	23536370	.	+	0	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000614;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000614;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03009_ch_T0000614:2;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23536371	23538285	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000614;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000614;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03009_ch_T0000614:3;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23538286	23538438	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000614;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000614;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03009_ch_T0000614:4;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23538286	23538438	.	+	2	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000614;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000614;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03009_ch_T0000614:3;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23538439	23540448	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000614;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000614;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03009_ch_T0000614:4;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23540449	23540563	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000614;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000614;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03009_ch_T0000614:5;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23540449	23540563	.	+	2	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000614;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000614;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03009_ch_T0000614:4;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23540564	23541518	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000614;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000614;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03009_ch_T0000614:5;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23541519	23541629	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000614;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000614;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03009_ch_T0000614:6;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23541519	23541629	.	+	1	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000614;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000614;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03009_ch_T0000614:5;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23541630	23542070	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000614;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000614;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03009_ch_T0000614:6;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23542071	23542181	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000614;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000614;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03009_ch_T0000614:7;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23542071	23542181	.	+	1	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000614;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000614;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03009_ch_T0000614:6;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23542182	23542615	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000614;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000614;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03009_ch_T0000614:7;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23542616	23542726	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000614;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000614;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03009_ch_T0000614:8;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23542616	23542726	.	+	1	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000614;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000614;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03009_ch_T0000614:7;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23542727	23543647	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000614;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000614;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03009_ch_T0000614:8;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23543648	23543758	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000614;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000614;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03009_ch_T0000614:9;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23543648	23543758	.	+	1	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000614;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000614;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03009_ch_T0000614:8;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23543759	23543845	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000614;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000614;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03009_ch_T0000614:9;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23543846	23543934	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000614;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000614;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03009_ch_T0000614:10;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23543846	23543934	.	+	1	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000614;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000614;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03009_ch_T0000614:9;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23543935	23545181	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000614;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000614;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03009_ch_T0000614:10;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23545182	23546340	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000614;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000614;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03009_ch_T0000614:11;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23545182	23545189	.	+	2	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000614;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000614;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03009_ch_T0000614:10;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	23545187	23545189	.	+	0	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000614;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000614;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=stop_codon:HG03009_ch_T0000614;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	23530474	23556572	100	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000615;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_G0000214;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=HG03009_ch_T0000615;Name=RBMY1D
HG03009_chrY	CAT	exon	23530474	23530621	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000615;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03009_ch_T0000615:0;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23530622	23532482	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000615;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03009_ch_T0000615:0;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23532483	23532595	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000615;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03009_ch_T0000615:1;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23532487	23532595	.	+	0	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000615;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03009_ch_T0000615:0;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	23532487	23532489	.	+	0	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000615;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=start_codon:HG03009_ch_T0000615;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23532596	23533069	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000615;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03009_ch_T0000615:1;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23533070	23533173	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000615;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03009_ch_T0000615:2;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23533070	23533173	.	+	2	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000615;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03009_ch_T0000615:1;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23533174	23536192	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000615;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03009_ch_T0000615:2;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23536193	23536370	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000615;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03009_ch_T0000615:3;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23536193	23536370	.	+	0	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000615;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03009_ch_T0000615:2;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23536371	23538285	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000615;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03009_ch_T0000615:3;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23538286	23538438	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000615;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03009_ch_T0000615:4;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23538286	23538438	.	+	2	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000615;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03009_ch_T0000615:3;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23538439	23540448	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000615;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03009_ch_T0000615:4;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23540449	23540563	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000615;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03009_ch_T0000615:5;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23540449	23540563	.	+	2	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000615;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03009_ch_T0000615:4;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23540564	23541518	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000615;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03009_ch_T0000615:5;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23541519	23541629	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000615;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03009_ch_T0000615:6;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23541519	23541629	.	+	1	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000615;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03009_ch_T0000615:5;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23541630	23542070	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000615;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03009_ch_T0000615:6;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23542071	23542181	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000615;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03009_ch_T0000615:7;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23542071	23542181	.	+	1	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000615;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03009_ch_T0000615:6;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23542182	23542615	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000615;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03009_ch_T0000615:7;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23542616	23542726	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000615;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03009_ch_T0000615:8;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23542616	23542726	.	+	1	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000615;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03009_ch_T0000615:7;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23542727	23543647	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000615;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03009_ch_T0000615:8;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23543648	23543758	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000615;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03009_ch_T0000615:9;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23543648	23543758	.	+	1	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000615;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03009_ch_T0000615:8;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23543759	23543845	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000615;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03009_ch_T0000615:9;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23543846	23543934	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000615;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03009_ch_T0000615:10;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23543846	23543934	.	+	1	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000615;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03009_ch_T0000615:9;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23543935	23555188	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000615;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03009_ch_T0000615:10;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23555189	23556572	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000615;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03009_ch_T0000615:11;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23555189	23555265	.	+	2	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000615;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03009_ch_T0000615:10;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	23555263	23555265	.	+	0	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000615;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=stop_codon:HG03009_ch_T0000615;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	23533084	23544922	100	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000616;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_G0000214;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=HG03009_ch_T0000616;Name=RBMY1D
HG03009_chrY	CAT	exon	23533084	23533173	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000616;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000616;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03009_ch_T0000616:0;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23533174	23538285	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000616;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000616;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03009_ch_T0000616:0;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23538286	23538438	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000616;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000616;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03009_ch_T0000616:1;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23538315	23538438	.	+	0	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000616;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000616;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03009_ch_T0000616:0;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	23538315	23538317	.	+	0	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000616;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000616;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=start_codon:HG03009_ch_T0000616;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23538439	23540448	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000616;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000616;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03009_ch_T0000616:1;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23540449	23540563	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000616;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000616;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03009_ch_T0000616:2;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23540449	23540563	.	+	2	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000616;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000616;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03009_ch_T0000616:1;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23540564	23541518	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000616;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000616;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03009_ch_T0000616:2;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23541519	23541629	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000616;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000616;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03009_ch_T0000616:3;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23541519	23541629	.	+	1	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000616;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000616;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03009_ch_T0000616:2;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23541630	23542070	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000616;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000616;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03009_ch_T0000616:3;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23542071	23542181	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000616;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000616;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03009_ch_T0000616:4;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23542071	23542181	.	+	1	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000616;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000616;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03009_ch_T0000616:3;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23542182	23542615	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000616;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000616;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03009_ch_T0000616:4;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23542616	23542726	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000616;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000616;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03009_ch_T0000616:5;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23542616	23542726	.	+	1	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000616;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000616;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03009_ch_T0000616:4;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23542727	23543647	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000616;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000616;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03009_ch_T0000616:5;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23543648	23543758	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000616;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000616;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03009_ch_T0000616:6;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23543648	23543758	.	+	1	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000616;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000616;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03009_ch_T0000616:5;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23543759	23543845	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000616;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000616;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03009_ch_T0000616:6;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23543846	23543934	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000616;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000616;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03009_ch_T0000616:7;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23543846	23543934	.	+	1	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000616;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000616;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03009_ch_T0000616:6;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23543935	23544345	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000616;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000616;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03009_ch_T0000616:7;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23544346	23544922	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000616;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000616;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03009_ch_T0000616:8;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23544346	23544644	.	+	2	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000616;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000616;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03009_ch_T0000616:7;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	23544642	23544644	.	+	0	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000616;gene_id=HG03009_ch_G0000214;Parent=HG03009_ch_T0000616;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=stop_codon:HG03009_ch_T0000616;Name=RBMY1D;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	23564630	23566883	.	-	.	source_gene_common_name=LOC105379266;source_gene=hg002_chrY_paternal_465;alternative_source_transcripts=hg002_chrY_paternal_465.1;gene_id=HG03009_ch_G0000215;gene_biotype=lncRNA;gene_name=LOC105379266;gene_sources=liftoff,transMap;ID=HG03009_ch_G0000215;Name=LOC105379266
HG03009_chrY	CAT	transcript	23564630	23566883	1000	-	.	source_transcript=hg002_chrY_paternal_465.1;source_transcript_name=hg002_chrY_paternal_465.1;source_gene=hg002_chrY_paternal_465;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_465;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_465.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_465.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379266;alternative_source_transcripts=hg002_chrY_paternal_465.1;AdditionalSources=liftoff;transcript_id=HG03009_ch_T0000617;gene_id=HG03009_ch_G0000215;Parent=HG03009_ch_G0000215;transcript_name=hg002_chrY_paternal_465.1;gene_name=LOC105379266;ID=HG03009_ch_T0000617;Name=LOC105379266
HG03009_chrY	CAT	exon	23564630	23565910	.	-	.	source_transcript=hg002_chrY_paternal_465.1;source_transcript_name=hg002_chrY_paternal_465.1;source_gene=hg002_chrY_paternal_465;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_465;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_465.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379266;alternative_source_transcripts=hg002_chrY_paternal_465.1;AdditionalSources=liftoff;transcript_id=HG03009_ch_T0000617;gene_id=HG03009_ch_G0000215;Parent=HG03009_ch_T0000617;transcript_name=hg002_chrY_paternal_465.1;gene_name=LOC105379266;ID=exon:HG03009_ch_T0000617:0;Name=LOC105379266;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23565911	23566588	.	-	.	source_transcript=hg002_chrY_paternal_465.1;source_transcript_name=hg002_chrY_paternal_465.1;source_gene=hg002_chrY_paternal_465;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_465;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_465.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379266;alternative_source_transcripts=hg002_chrY_paternal_465.1;AdditionalSources=liftoff;transcript_id=HG03009_ch_T0000617;gene_id=HG03009_ch_G0000215;Parent=HG03009_ch_T0000617;transcript_name=hg002_chrY_paternal_465.1;gene_name=LOC105379266;ID=intron:HG03009_ch_T0000617:0;Name=LOC105379266;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23566589	23566883	.	-	.	source_transcript=hg002_chrY_paternal_465.1;source_transcript_name=hg002_chrY_paternal_465.1;source_gene=hg002_chrY_paternal_465;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_465;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_465.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379266;alternative_source_transcripts=hg002_chrY_paternal_465.1;AdditionalSources=liftoff;transcript_id=HG03009_ch_T0000617;gene_id=HG03009_ch_G0000215;Parent=HG03009_ch_T0000617;transcript_name=hg002_chrY_paternal_465.1;gene_name=LOC105379266;ID=exon:HG03009_ch_T0000617:1;Name=LOC105379266;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	23579190	23590256	.	-	.	source_gene_common_name=TTTY13;source_gene=hg002_chrY_paternal_466;alternative_source_transcripts=hg002_chrY_paternal_466.1,hg002_chrY_paternal_466.1;gene_id=HG03009_ch_G0000216;gene_biotype=lncRNA;gene_name=TTTY13;gene_sources=liftoff;ID=HG03009_ch_G0000216;Name=TTTY13
HG03009_chrY	CAT	transcript	23579190	23590256	1000	-	.	source_transcript=hg002_chrY_paternal_466.1;source_transcript_name=hg002_chrY_paternal_466.1;source_gene=hg002_chrY_paternal_466;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_466;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_466.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_466.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=hg002_chrY_paternal_466.1,hg002_chrY_paternal_466.1;transcript_id=HG03009_ch_T0000618;gene_id=HG03009_ch_G0000216;Parent=HG03009_ch_G0000216;transcript_name=hg002_chrY_paternal_466.1;gene_name=TTTY13;ID=HG03009_ch_T0000618;Name=TTTY13
HG03009_chrY	CAT	exon	23579190	23579252	.	-	.	source_transcript=hg002_chrY_paternal_466.1;source_transcript_name=hg002_chrY_paternal_466.1;source_gene=hg002_chrY_paternal_466;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_466;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_466.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_466.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=hg002_chrY_paternal_466.1,hg002_chrY_paternal_466.1;transcript_id=HG03009_ch_T0000618;gene_id=HG03009_ch_G0000216;Parent=HG03009_ch_T0000618;transcript_name=hg002_chrY_paternal_466.1;gene_name=TTTY13;ID=exon:HG03009_ch_T0000618:0;Name=TTTY13;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23579253	23580372	.	-	.	source_transcript=hg002_chrY_paternal_466.1;source_transcript_name=hg002_chrY_paternal_466.1;source_gene=hg002_chrY_paternal_466;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_466;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_466.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_466.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=hg002_chrY_paternal_466.1,hg002_chrY_paternal_466.1;transcript_id=HG03009_ch_T0000618;gene_id=HG03009_ch_G0000216;Parent=HG03009_ch_T0000618;transcript_name=hg002_chrY_paternal_466.1;gene_name=TTTY13;ID=intron:HG03009_ch_T0000618:0;Name=TTTY13;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23580373	23580464	.	-	.	source_transcript=hg002_chrY_paternal_466.1;source_transcript_name=hg002_chrY_paternal_466.1;source_gene=hg002_chrY_paternal_466;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_466;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_466.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_466.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=hg002_chrY_paternal_466.1,hg002_chrY_paternal_466.1;transcript_id=HG03009_ch_T0000618;gene_id=HG03009_ch_G0000216;Parent=HG03009_ch_T0000618;transcript_name=hg002_chrY_paternal_466.1;gene_name=TTTY13;ID=exon:HG03009_ch_T0000618:1;Name=TTTY13;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23580465	23583090	.	-	.	source_transcript=hg002_chrY_paternal_466.1;source_transcript_name=hg002_chrY_paternal_466.1;source_gene=hg002_chrY_paternal_466;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_466;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_466.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_466.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=hg002_chrY_paternal_466.1,hg002_chrY_paternal_466.1;transcript_id=HG03009_ch_T0000618;gene_id=HG03009_ch_G0000216;Parent=HG03009_ch_T0000618;transcript_name=hg002_chrY_paternal_466.1;gene_name=TTTY13;ID=intron:HG03009_ch_T0000618:1;Name=TTTY13;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23583091	23583252	.	-	.	source_transcript=hg002_chrY_paternal_466.1;source_transcript_name=hg002_chrY_paternal_466.1;source_gene=hg002_chrY_paternal_466;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_466;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_466.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_466.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=hg002_chrY_paternal_466.1,hg002_chrY_paternal_466.1;transcript_id=HG03009_ch_T0000618;gene_id=HG03009_ch_G0000216;Parent=HG03009_ch_T0000618;transcript_name=hg002_chrY_paternal_466.1;gene_name=TTTY13;ID=exon:HG03009_ch_T0000618:2;Name=TTTY13;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23583253	23584861	.	-	.	source_transcript=hg002_chrY_paternal_466.1;source_transcript_name=hg002_chrY_paternal_466.1;source_gene=hg002_chrY_paternal_466;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_466;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_466.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_466.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=hg002_chrY_paternal_466.1,hg002_chrY_paternal_466.1;transcript_id=HG03009_ch_T0000618;gene_id=HG03009_ch_G0000216;Parent=HG03009_ch_T0000618;transcript_name=hg002_chrY_paternal_466.1;gene_name=TTTY13;ID=intron:HG03009_ch_T0000618:2;Name=TTTY13;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23584862	23584960	.	-	.	source_transcript=hg002_chrY_paternal_466.1;source_transcript_name=hg002_chrY_paternal_466.1;source_gene=hg002_chrY_paternal_466;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_466;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_466.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_466.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=hg002_chrY_paternal_466.1,hg002_chrY_paternal_466.1;transcript_id=HG03009_ch_T0000618;gene_id=HG03009_ch_G0000216;Parent=HG03009_ch_T0000618;transcript_name=hg002_chrY_paternal_466.1;gene_name=TTTY13;ID=exon:HG03009_ch_T0000618:3;Name=TTTY13;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23584961	23585555	.	-	.	source_transcript=hg002_chrY_paternal_466.1;source_transcript_name=hg002_chrY_paternal_466.1;source_gene=hg002_chrY_paternal_466;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_466;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_466.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_466.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=hg002_chrY_paternal_466.1,hg002_chrY_paternal_466.1;transcript_id=HG03009_ch_T0000618;gene_id=HG03009_ch_G0000216;Parent=HG03009_ch_T0000618;transcript_name=hg002_chrY_paternal_466.1;gene_name=TTTY13;ID=intron:HG03009_ch_T0000618:3;Name=TTTY13;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23585556	23585717	.	-	.	source_transcript=hg002_chrY_paternal_466.1;source_transcript_name=hg002_chrY_paternal_466.1;source_gene=hg002_chrY_paternal_466;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_466;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_466.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_466.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=hg002_chrY_paternal_466.1,hg002_chrY_paternal_466.1;transcript_id=HG03009_ch_T0000618;gene_id=HG03009_ch_G0000216;Parent=HG03009_ch_T0000618;transcript_name=hg002_chrY_paternal_466.1;gene_name=TTTY13;ID=exon:HG03009_ch_T0000618:4;Name=TTTY13;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23585718	23590175	.	-	.	source_transcript=hg002_chrY_paternal_466.1;source_transcript_name=hg002_chrY_paternal_466.1;source_gene=hg002_chrY_paternal_466;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_466;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_466.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_466.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=hg002_chrY_paternal_466.1,hg002_chrY_paternal_466.1;transcript_id=HG03009_ch_T0000618;gene_id=HG03009_ch_G0000216;Parent=HG03009_ch_T0000618;transcript_name=hg002_chrY_paternal_466.1;gene_name=TTTY13;ID=intron:HG03009_ch_T0000618:4;Name=TTTY13;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23590176	23590256	.	-	.	source_transcript=hg002_chrY_paternal_466.1;source_transcript_name=hg002_chrY_paternal_466.1;source_gene=hg002_chrY_paternal_466;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_466;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_466.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_466.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=hg002_chrY_paternal_466.1,hg002_chrY_paternal_466.1;transcript_id=HG03009_ch_T0000618;gene_id=HG03009_ch_G0000216;Parent=HG03009_ch_T0000618;transcript_name=hg002_chrY_paternal_466.1;gene_name=TTTY13;ID=exon:HG03009_ch_T0000618:5;Name=TTTY13;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	23765002	23779658	.	-	.	source_gene_common_name=LOC105377236;source_gene=hg002_chrY_paternal_472;alternative_source_transcripts=hg002_chrY_paternal_472.1,hg002_chrY_paternal_472.1;gene_id=HG03009_ch_G0000217;gene_biotype=lncRNA;gene_name=LOC105377236;gene_sources=liftoff;ID=HG03009_ch_G0000217;Name=LOC105377236
HG03009_chrY	CAT	transcript	23765002	23778426	1000	-	.	source_transcript=hg002_chrY_paternal_472.1;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.1,hg002_chrY_paternal_472.1;transcript_id=HG03009_ch_T0000619;gene_id=HG03009_ch_G0000217;Parent=HG03009_ch_G0000217;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=HG03009_ch_T0000619;Name=LOC105377236
HG03009_chrY	CAT	exon	23765002	23766545	.	-	.	source_transcript=hg002_chrY_paternal_472.1;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.1,hg002_chrY_paternal_472.1;transcript_id=HG03009_ch_T0000619;gene_id=HG03009_ch_G0000217;Parent=HG03009_ch_T0000619;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=exon:HG03009_ch_T0000619:0;Name=LOC105377236;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23766546	23773924	.	-	.	source_transcript=hg002_chrY_paternal_472.1;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.1,hg002_chrY_paternal_472.1;transcript_id=HG03009_ch_T0000619;gene_id=HG03009_ch_G0000217;Parent=HG03009_ch_T0000619;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=intron:HG03009_ch_T0000619:0;Name=LOC105377236;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23773925	23774060	.	-	.	source_transcript=hg002_chrY_paternal_472.1;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.1,hg002_chrY_paternal_472.1;transcript_id=HG03009_ch_T0000619;gene_id=HG03009_ch_G0000217;Parent=HG03009_ch_T0000619;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=exon:HG03009_ch_T0000619:1;Name=LOC105377236;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23774061	23777055	.	-	.	source_transcript=hg002_chrY_paternal_472.1;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.1,hg002_chrY_paternal_472.1;transcript_id=HG03009_ch_T0000619;gene_id=HG03009_ch_G0000217;Parent=HG03009_ch_T0000619;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=intron:HG03009_ch_T0000619:1;Name=LOC105377236;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23777056	23777217	.	-	.	source_transcript=hg002_chrY_paternal_472.1;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.1,hg002_chrY_paternal_472.1;transcript_id=HG03009_ch_T0000619;gene_id=HG03009_ch_G0000217;Parent=HG03009_ch_T0000619;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=exon:HG03009_ch_T0000619:2;Name=LOC105377236;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23777218	23777461	.	-	.	source_transcript=hg002_chrY_paternal_472.1;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.1,hg002_chrY_paternal_472.1;transcript_id=HG03009_ch_T0000619;gene_id=HG03009_ch_G0000217;Parent=HG03009_ch_T0000619;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=intron:HG03009_ch_T0000619:2;Name=LOC105377236;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23777462	23778426	.	-	.	source_transcript=hg002_chrY_paternal_472.1;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.1,hg002_chrY_paternal_472.1;transcript_id=HG03009_ch_T0000619;gene_id=HG03009_ch_G0000217;Parent=HG03009_ch_T0000619;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=exon:HG03009_ch_T0000619:3;Name=LOC105377236;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	23765002	23778426	1000	-	.	source_transcript=hg002_chrY_paternal_472.2;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.2,hg002_chrY_paternal_472.2;transcript_id=HG03009_ch_T0000620;gene_id=HG03009_ch_G0000217;Parent=HG03009_ch_G0000217;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=HG03009_ch_T0000620;Name=LOC105377236
HG03009_chrY	CAT	exon	23765002	23766545	.	-	.	source_transcript=hg002_chrY_paternal_472.2;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.2,hg002_chrY_paternal_472.2;transcript_id=HG03009_ch_T0000620;gene_id=HG03009_ch_G0000217;Parent=HG03009_ch_T0000620;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=exon:HG03009_ch_T0000620:0;Name=LOC105377236;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23766546	23773924	.	-	.	source_transcript=hg002_chrY_paternal_472.2;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.2,hg002_chrY_paternal_472.2;transcript_id=HG03009_ch_T0000620;gene_id=HG03009_ch_G0000217;Parent=HG03009_ch_T0000620;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=intron:HG03009_ch_T0000620:0;Name=LOC105377236;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23773925	23774060	.	-	.	source_transcript=hg002_chrY_paternal_472.2;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.2,hg002_chrY_paternal_472.2;transcript_id=HG03009_ch_T0000620;gene_id=HG03009_ch_G0000217;Parent=HG03009_ch_T0000620;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=exon:HG03009_ch_T0000620:1;Name=LOC105377236;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23774061	23777055	.	-	.	source_transcript=hg002_chrY_paternal_472.2;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.2,hg002_chrY_paternal_472.2;transcript_id=HG03009_ch_T0000620;gene_id=HG03009_ch_G0000217;Parent=HG03009_ch_T0000620;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=intron:HG03009_ch_T0000620:1;Name=LOC105377236;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23777056	23777130	.	-	.	source_transcript=hg002_chrY_paternal_472.2;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.2,hg002_chrY_paternal_472.2;transcript_id=HG03009_ch_T0000620;gene_id=HG03009_ch_G0000217;Parent=HG03009_ch_T0000620;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=exon:HG03009_ch_T0000620:2;Name=LOC105377236;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23777131	23777461	.	-	.	source_transcript=hg002_chrY_paternal_472.2;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.2,hg002_chrY_paternal_472.2;transcript_id=HG03009_ch_T0000620;gene_id=HG03009_ch_G0000217;Parent=HG03009_ch_T0000620;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=intron:HG03009_ch_T0000620:2;Name=LOC105377236;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23777462	23778426	.	-	.	source_transcript=hg002_chrY_paternal_472.2;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.2,hg002_chrY_paternal_472.2;transcript_id=HG03009_ch_T0000620;gene_id=HG03009_ch_G0000217;Parent=HG03009_ch_T0000620;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=exon:HG03009_ch_T0000620:3;Name=LOC105377236;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	23765002	23779658	1000	-	.	source_transcript=hg002_chrY_paternal_472.3;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.3,hg002_chrY_paternal_472.3;transcript_id=HG03009_ch_T0000621;gene_id=HG03009_ch_G0000217;Parent=HG03009_ch_G0000217;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=HG03009_ch_T0000621;Name=LOC105377236
HG03009_chrY	CAT	exon	23765002	23766545	.	-	.	source_transcript=hg002_chrY_paternal_472.3;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.3,hg002_chrY_paternal_472.3;transcript_id=HG03009_ch_T0000621;gene_id=HG03009_ch_G0000217;Parent=HG03009_ch_T0000621;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=exon:HG03009_ch_T0000621:0;Name=LOC105377236;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23766546	23773924	.	-	.	source_transcript=hg002_chrY_paternal_472.3;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.3,hg002_chrY_paternal_472.3;transcript_id=HG03009_ch_T0000621;gene_id=HG03009_ch_G0000217;Parent=HG03009_ch_T0000621;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=intron:HG03009_ch_T0000621:0;Name=LOC105377236;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23773925	23774060	.	-	.	source_transcript=hg002_chrY_paternal_472.3;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.3,hg002_chrY_paternal_472.3;transcript_id=HG03009_ch_T0000621;gene_id=HG03009_ch_G0000217;Parent=HG03009_ch_T0000621;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=exon:HG03009_ch_T0000621:1;Name=LOC105377236;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23774061	23777055	.	-	.	source_transcript=hg002_chrY_paternal_472.3;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.3,hg002_chrY_paternal_472.3;transcript_id=HG03009_ch_T0000621;gene_id=HG03009_ch_G0000217;Parent=HG03009_ch_T0000621;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=intron:HG03009_ch_T0000621:1;Name=LOC105377236;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23777056	23777217	.	-	.	source_transcript=hg002_chrY_paternal_472.3;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.3,hg002_chrY_paternal_472.3;transcript_id=HG03009_ch_T0000621;gene_id=HG03009_ch_G0000217;Parent=HG03009_ch_T0000621;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=exon:HG03009_ch_T0000621:2;Name=LOC105377236;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23777218	23777461	.	-	.	source_transcript=hg002_chrY_paternal_472.3;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.3,hg002_chrY_paternal_472.3;transcript_id=HG03009_ch_T0000621;gene_id=HG03009_ch_G0000217;Parent=HG03009_ch_T0000621;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=intron:HG03009_ch_T0000621:2;Name=LOC105377236;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23777462	23778247	.	-	.	source_transcript=hg002_chrY_paternal_472.3;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.3,hg002_chrY_paternal_472.3;transcript_id=HG03009_ch_T0000621;gene_id=HG03009_ch_G0000217;Parent=HG03009_ch_T0000621;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=exon:HG03009_ch_T0000621:3;Name=LOC105377236;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23778248	23779502	.	-	.	source_transcript=hg002_chrY_paternal_472.3;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.3,hg002_chrY_paternal_472.3;transcript_id=HG03009_ch_T0000621;gene_id=HG03009_ch_G0000217;Parent=HG03009_ch_T0000621;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=intron:HG03009_ch_T0000621:3;Name=LOC105377236;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23779503	23779658	.	-	.	source_transcript=hg002_chrY_paternal_472.3;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.3,hg002_chrY_paternal_472.3;transcript_id=HG03009_ch_T0000621;gene_id=HG03009_ch_G0000217;Parent=HG03009_ch_T0000621;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=exon:HG03009_ch_T0000621:4;Name=LOC105377236;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	23792121	23795009	.	+	.	source_gene_common_name=LOC105377237;source_gene=hg002_chrY_paternal_474;alternative_source_transcripts=hg002_chrY_paternal_474.1,hg002_chrY_paternal_474.1;gene_id=HG03009_ch_G0000218;gene_biotype=lncRNA;gene_name=LOC105377237;gene_sources=liftoff;ID=HG03009_ch_G0000218;Name=LOC105377237
HG03009_chrY	CAT	transcript	23792121	23795009	1000	+	.	source_transcript=hg002_chrY_paternal_474.1;source_transcript_name=hg002_chrY_paternal_474.1;source_gene=hg002_chrY_paternal_474;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_474;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_474.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_474.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377237;alternative_source_transcripts=hg002_chrY_paternal_474.1,hg002_chrY_paternal_474.1;transcript_id=HG03009_ch_T0000622;gene_id=HG03009_ch_G0000218;Parent=HG03009_ch_G0000218;transcript_name=hg002_chrY_paternal_474.1;gene_name=LOC105377237;ID=HG03009_ch_T0000622;Name=LOC105377237
HG03009_chrY	CAT	exon	23792121	23793358	.	+	.	source_transcript=hg002_chrY_paternal_474.1;source_transcript_name=hg002_chrY_paternal_474.1;source_gene=hg002_chrY_paternal_474;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_474;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_474.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_474.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377237;alternative_source_transcripts=hg002_chrY_paternal_474.1,hg002_chrY_paternal_474.1;transcript_id=HG03009_ch_T0000622;gene_id=HG03009_ch_G0000218;Parent=HG03009_ch_T0000622;transcript_name=hg002_chrY_paternal_474.1;gene_name=LOC105377237;ID=exon:HG03009_ch_T0000622:0;Name=LOC105377237;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23793359	23794530	.	+	.	source_transcript=hg002_chrY_paternal_474.1;source_transcript_name=hg002_chrY_paternal_474.1;source_gene=hg002_chrY_paternal_474;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_474;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_474.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_474.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377237;alternative_source_transcripts=hg002_chrY_paternal_474.1,hg002_chrY_paternal_474.1;transcript_id=HG03009_ch_T0000622;gene_id=HG03009_ch_G0000218;Parent=HG03009_ch_T0000622;transcript_name=hg002_chrY_paternal_474.1;gene_name=LOC105377237;ID=intron:HG03009_ch_T0000622:0;Name=LOC105377237;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23794531	23794690	.	+	.	source_transcript=hg002_chrY_paternal_474.1;source_transcript_name=hg002_chrY_paternal_474.1;source_gene=hg002_chrY_paternal_474;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_474;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_474.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_474.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377237;alternative_source_transcripts=hg002_chrY_paternal_474.1,hg002_chrY_paternal_474.1;transcript_id=HG03009_ch_T0000622;gene_id=HG03009_ch_G0000218;Parent=HG03009_ch_T0000622;transcript_name=hg002_chrY_paternal_474.1;gene_name=LOC105377237;ID=exon:HG03009_ch_T0000622:1;Name=LOC105377237;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23794691	23794850	.	+	.	source_transcript=hg002_chrY_paternal_474.1;source_transcript_name=hg002_chrY_paternal_474.1;source_gene=hg002_chrY_paternal_474;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_474;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_474.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_474.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377237;alternative_source_transcripts=hg002_chrY_paternal_474.1,hg002_chrY_paternal_474.1;transcript_id=HG03009_ch_T0000622;gene_id=HG03009_ch_G0000218;Parent=HG03009_ch_T0000622;transcript_name=hg002_chrY_paternal_474.1;gene_name=LOC105377237;ID=intron:HG03009_ch_T0000622:1;Name=LOC105377237;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23794851	23795009	.	+	.	source_transcript=hg002_chrY_paternal_474.1;source_transcript_name=hg002_chrY_paternal_474.1;source_gene=hg002_chrY_paternal_474;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_474;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_474.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_474.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377237;alternative_source_transcripts=hg002_chrY_paternal_474.1,hg002_chrY_paternal_474.1;transcript_id=HG03009_ch_T0000622;gene_id=HG03009_ch_G0000218;Parent=HG03009_ch_T0000622;transcript_name=hg002_chrY_paternal_474.1;gene_name=LOC105377237;ID=exon:HG03009_ch_T0000622:2;Name=LOC105377237;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	23835928	23850377	.	-	.	source_gene_common_name=RBMY1A1;source_gene=hg002_chrY_paternal_475;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;gene_id=HG03009_ch_G0000219;gene_biotype=protein_coding;gene_name=RBMY1A1;gene_sources=liftoff,augTM;ID=HG03009_ch_G0000219;Name=RBMY1A1
HG03009_chrY	CAT	transcript	23835928	23850377	1000	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000623;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_G0000219;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=HG03009_ch_T0000623;Name=RBMY1A1
HG03009_chrY	CAT	exon	23835928	23836504	.	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000623;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000623;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03009_ch_T0000623:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23836206	23836504	.	-	2	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000623;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000623;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03009_ch_T0000623:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	23836206	23836208	.	-	0	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000623;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000623;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=stop_codon:HG03009_ch_T0000623;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23836505	23836915	.	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000623;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000623;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03009_ch_T0000623:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23836916	23837004	.	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000623;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000623;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03009_ch_T0000623:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23836916	23837004	.	-	1	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000623;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000623;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03009_ch_T0000623:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23837005	23838122	.	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000623;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000623;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03009_ch_T0000623:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23838123	23838233	.	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000623;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000623;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03009_ch_T0000623:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23838123	23838233	.	-	1	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000623;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000623;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03009_ch_T0000623:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23838234	23838667	.	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000623;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000623;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03009_ch_T0000623:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23838668	23838778	.	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000623;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000623;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03009_ch_T0000623:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23838668	23838778	.	-	1	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000623;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000623;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03009_ch_T0000623:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23838779	23839219	.	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000623;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000623;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03009_ch_T0000623:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23839220	23839330	.	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000623;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000623;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03009_ch_T0000623:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23839220	23839330	.	-	1	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000623;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000623;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03009_ch_T0000623:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23839331	23840285	.	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000623;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000623;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03009_ch_T0000623:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23840286	23840400	.	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000623;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000623;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03009_ch_T0000623:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23840286	23840400	.	-	2	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000623;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000623;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03009_ch_T0000623:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23840401	23842410	.	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000623;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000623;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03009_ch_T0000623:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23842411	23842563	.	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000623;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000623;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03009_ch_T0000623:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23842411	23842563	.	-	2	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000623;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000623;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03009_ch_T0000623:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23842564	23844478	.	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000623;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000623;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03009_ch_T0000623:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23844479	23844656	.	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000623;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000623;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03009_ch_T0000623:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23844479	23844656	.	-	0	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000623;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000623;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03009_ch_T0000623:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23844657	23847675	.	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000623;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000623;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03009_ch_T0000623:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23847676	23847779	.	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000623;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000623;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03009_ch_T0000623:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23847676	23847779	.	-	2	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000623;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000623;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03009_ch_T0000623:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23847780	23848255	.	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000623;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000623;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03009_ch_T0000623:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23848256	23848368	.	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000623;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000623;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03009_ch_T0000623:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23848256	23848364	.	-	0	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000623;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000623;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03009_ch_T0000623:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	23848362	23848364	.	-	0	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000623;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000623;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=start_codon:HG03009_ch_T0000623;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23848369	23850229	.	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000623;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000623;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03009_ch_T0000623:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23850230	23850377	.	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000623;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000623;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03009_ch_T0000623:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	23835928	23850377	1000	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000624;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_G0000219;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=HG03009_ch_T0000624;Name=RBMY1A1
HG03009_chrY	CAT	exon	23835928	23836504	.	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000624;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000624;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03009_ch_T0000624:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23836206	23836504	.	-	2	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000624;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000624;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03009_ch_T0000624:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	23836206	23836208	.	-	0	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000624;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000624;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=stop_codon:HG03009_ch_T0000624;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23836505	23836915	.	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000624;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000624;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03009_ch_T0000624:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23836916	23837004	.	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000624;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000624;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03009_ch_T0000624:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23836916	23837004	.	-	1	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000624;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000624;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03009_ch_T0000624:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23837005	23837090	.	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000624;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000624;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03009_ch_T0000624:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23837091	23837201	.	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000624;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000624;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03009_ch_T0000624:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23837091	23837201	.	-	1	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000624;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000624;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03009_ch_T0000624:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23837202	23838122	.	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000624;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000624;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03009_ch_T0000624:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23838123	23838233	.	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000624;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000624;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03009_ch_T0000624:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23838123	23838233	.	-	1	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000624;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000624;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03009_ch_T0000624:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23838234	23838667	.	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000624;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000624;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03009_ch_T0000624:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23838668	23838778	.	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000624;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000624;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03009_ch_T0000624:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23838668	23838778	.	-	1	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000624;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000624;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03009_ch_T0000624:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23838779	23839219	.	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000624;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000624;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03009_ch_T0000624:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23839220	23839330	.	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000624;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000624;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03009_ch_T0000624:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23839220	23839330	.	-	1	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000624;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000624;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03009_ch_T0000624:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23839331	23840285	.	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000624;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000624;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03009_ch_T0000624:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23840286	23840400	.	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000624;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000624;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03009_ch_T0000624:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23840286	23840400	.	-	2	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000624;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000624;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03009_ch_T0000624:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23840401	23842410	.	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000624;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000624;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03009_ch_T0000624:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23842411	23842563	.	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000624;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000624;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03009_ch_T0000624:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23842411	23842534	.	-	0	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000624;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000624;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03009_ch_T0000624:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	23842532	23842534	.	-	0	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000624;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000624;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=start_codon:HG03009_ch_T0000624;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23842564	23847675	.	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000624;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000624;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03009_ch_T0000624:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23847676	23847779	.	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000624;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000624;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03009_ch_T0000624:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23847780	23848255	.	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000624;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000624;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03009_ch_T0000624:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23848256	23848368	.	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000624;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000624;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03009_ch_T0000624:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23848369	23850229	.	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000624;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000624;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03009_ch_T0000624:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23850230	23850377	.	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000624;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000624;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03009_ch_T0000624:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	23835928	23850377	1000	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000625;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_G0000219;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=HG03009_ch_T0000625;Name=RBMY1A1
HG03009_chrY	CAT	exon	23835928	23836504	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000625;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000625;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03009_ch_T0000625:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23836206	23836504	.	-	2	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000625;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000625;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03009_ch_T0000625:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	23836206	23836208	.	-	0	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000625;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000625;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=stop_codon:HG03009_ch_T0000625;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23836505	23836915	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000625;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000625;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03009_ch_T0000625:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23836916	23837004	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000625;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000625;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03009_ch_T0000625:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23836916	23837004	.	-	1	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000625;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000625;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03009_ch_T0000625:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23837005	23837090	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000625;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000625;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03009_ch_T0000625:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23837091	23837201	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000625;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000625;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03009_ch_T0000625:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23837091	23837201	.	-	1	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000625;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000625;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03009_ch_T0000625:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23837202	23838122	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000625;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000625;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03009_ch_T0000625:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23838123	23838233	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000625;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000625;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03009_ch_T0000625:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23838123	23838233	.	-	1	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000625;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000625;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03009_ch_T0000625:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23838234	23838667	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000625;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000625;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03009_ch_T0000625:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23838668	23838778	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000625;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000625;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03009_ch_T0000625:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23838668	23838778	.	-	1	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000625;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000625;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03009_ch_T0000625:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23838779	23839219	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000625;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000625;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03009_ch_T0000625:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23839220	23839330	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000625;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000625;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03009_ch_T0000625:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23839220	23839330	.	-	1	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000625;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000625;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03009_ch_T0000625:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23839331	23840285	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000625;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000625;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03009_ch_T0000625:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23840286	23840400	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000625;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000625;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03009_ch_T0000625:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23840286	23840400	.	-	2	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000625;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000625;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03009_ch_T0000625:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23840401	23842410	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000625;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000625;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03009_ch_T0000625:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23842411	23842563	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000625;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000625;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03009_ch_T0000625:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23842411	23842563	.	-	2	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000625;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000625;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03009_ch_T0000625:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23842564	23844478	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000625;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000625;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03009_ch_T0000625:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23844479	23844656	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000625;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000625;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03009_ch_T0000625:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23844479	23844656	.	-	0	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000625;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000625;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03009_ch_T0000625:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23844657	23847675	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000625;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000625;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03009_ch_T0000625:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23847676	23847779	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000625;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000625;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03009_ch_T0000625:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23847676	23847779	.	-	2	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000625;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000625;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03009_ch_T0000625:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23847780	23848255	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000625;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000625;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03009_ch_T0000625:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23848256	23848368	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000625;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000625;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03009_ch_T0000625:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23848256	23848364	.	-	0	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000625;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000625;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03009_ch_T0000625:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	23848362	23848364	.	-	0	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000625;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000625;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=start_codon:HG03009_ch_T0000625;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23848369	23850229	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000625;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000625;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03009_ch_T0000625:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23850230	23850377	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000625;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000625;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03009_ch_T0000625:11;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	23836916	23850377	1000	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000626;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_G0000219;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=HG03009_ch_T0000626;Name=RBMY1A1
HG03009_chrY	CAT	exon	23836916	23837004	.	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000626;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000626;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03009_ch_T0000626:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23836917	23837004	.	-	1	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000626;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000626;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03009_ch_T0000626:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	23836917	23836919	.	-	0	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000626;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000626;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=stop_codon:HG03009_ch_T0000626;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23837005	23837090	.	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000626;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000626;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03009_ch_T0000626:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23837091	23837201	.	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000626;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000626;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03009_ch_T0000626:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23837091	23837201	.	-	1	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000626;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000626;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03009_ch_T0000626:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23837202	23838122	.	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000626;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000626;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03009_ch_T0000626:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23838123	23838233	.	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000626;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000626;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03009_ch_T0000626:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23838123	23838233	.	-	1	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000626;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000626;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03009_ch_T0000626:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23838234	23838667	.	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000626;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000626;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03009_ch_T0000626:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23838668	23838778	.	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000626;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000626;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03009_ch_T0000626:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23838668	23838778	.	-	1	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000626;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000626;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03009_ch_T0000626:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23838779	23839219	.	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000626;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000626;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03009_ch_T0000626:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23839220	23839330	.	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000626;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000626;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03009_ch_T0000626:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23839220	23839330	.	-	1	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000626;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000626;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03009_ch_T0000626:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23839331	23840285	.	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000626;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000626;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03009_ch_T0000626:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23840286	23840400	.	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000626;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000626;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03009_ch_T0000626:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23840286	23840400	.	-	2	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000626;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000626;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03009_ch_T0000626:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23840401	23842410	.	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000626;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000626;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03009_ch_T0000626:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23842411	23842563	.	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000626;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000626;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03009_ch_T0000626:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23842411	23842563	.	-	2	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000626;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000626;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03009_ch_T0000626:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23842564	23844478	.	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000626;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000626;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03009_ch_T0000626:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23844479	23844656	.	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000626;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000626;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03009_ch_T0000626:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23844479	23844656	.	-	0	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000626;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000626;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03009_ch_T0000626:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23844657	23847675	.	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000626;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000626;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03009_ch_T0000626:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23847676	23847779	.	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000626;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000626;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03009_ch_T0000626:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23847676	23847779	.	-	2	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000626;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000626;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03009_ch_T0000626:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23847780	23848255	.	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000626;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000626;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03009_ch_T0000626:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23848256	23848368	.	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000626;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000626;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03009_ch_T0000626:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23848256	23848364	.	-	0	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000626;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000626;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03009_ch_T0000626:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	23848362	23848364	.	-	0	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000626;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000626;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=start_codon:HG03009_ch_T0000626;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23848369	23850229	.	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000626;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000626;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03009_ch_T0000626:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23850230	23850377	.	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000626;gene_id=HG03009_ch_G0000219;Parent=HG03009_ch_T0000626;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03009_ch_T0000626:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	23858028	23873883	.	-	.	source_gene_common_name=RBMY1E;source_gene=hg002_chrY_paternal_477;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;gene_id=HG03009_ch_G0000220;gene_biotype=protein_coding;gene_name=RBMY1E;gene_sources=liftoff,augTM;ID=HG03009_ch_G0000220;Name=RBMY1E
HG03009_chrY	CAT	transcript	23858028	23873883	100	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000627;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_G0000220;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=HG03009_ch_T0000627;Name=RBMY1E
HG03009_chrY	CAT	exon	23858028	23859209	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000627;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000627;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03009_ch_T0000627:0;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23859202	23859209	.	-	2	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000627;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000627;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03009_ch_T0000627:0;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	23859202	23859204	.	-	0	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000627;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000627;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=stop_codon:HG03009_ch_T0000627;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23859210	23860456	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000627;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000627;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03009_ch_T0000627:0;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23860457	23860545	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000627;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000627;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03009_ch_T0000627:1;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23860457	23860545	.	-	1	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000627;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000627;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03009_ch_T0000627:1;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23860546	23860631	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000627;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000627;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03009_ch_T0000627:1;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23860632	23860742	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000627;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000627;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03009_ch_T0000627:2;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23860632	23860742	.	-	1	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000627;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000627;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03009_ch_T0000627:2;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23860743	23861663	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000627;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000627;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03009_ch_T0000627:2;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23861664	23861774	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000627;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000627;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03009_ch_T0000627:3;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23861664	23861774	.	-	1	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000627;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000627;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03009_ch_T0000627:3;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23861775	23862208	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000627;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000627;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03009_ch_T0000627:3;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23862209	23862319	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000627;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000627;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03009_ch_T0000627:4;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23862209	23862319	.	-	1	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000627;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000627;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03009_ch_T0000627:4;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23862320	23862760	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000627;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000627;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03009_ch_T0000627:4;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23862761	23862871	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000627;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000627;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03009_ch_T0000627:5;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23862761	23862871	.	-	1	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000627;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000627;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03009_ch_T0000627:5;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23862872	23863826	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000627;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000627;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03009_ch_T0000627:5;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23863827	23863941	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000627;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000627;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03009_ch_T0000627:6;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23863827	23863941	.	-	2	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000627;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000627;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03009_ch_T0000627:6;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23863942	23865951	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000627;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000627;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03009_ch_T0000627:6;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23865952	23866104	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000627;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000627;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03009_ch_T0000627:7;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23865952	23866104	.	-	2	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000627;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000627;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03009_ch_T0000627:7;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23866105	23868019	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000627;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000627;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03009_ch_T0000627:7;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23868020	23868197	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000627;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000627;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03009_ch_T0000627:8;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23868020	23868197	.	-	0	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000627;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000627;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03009_ch_T0000627:8;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23868198	23871216	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000627;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000627;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03009_ch_T0000627:8;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23871217	23871320	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000627;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000627;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03009_ch_T0000627:9;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23871217	23871320	.	-	2	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000627;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000627;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03009_ch_T0000627:9;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23871321	23871796	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000627;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000627;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03009_ch_T0000627:9;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23871797	23871909	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000627;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000627;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03009_ch_T0000627:10;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23871797	23871905	.	-	0	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000627;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000627;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03009_ch_T0000627:10;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	23871903	23871905	.	-	0	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000627;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000627;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=start_codon:HG03009_ch_T0000627;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23871910	23873770	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000627;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000627;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03009_ch_T0000627:10;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23873771	23873883	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000627;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000627;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03009_ch_T0000627:11;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	23859473	23871307	100	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000628;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_G0000220;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=HG03009_ch_T0000628;Name=RBMY1E
HG03009_chrY	CAT	exon	23859473	23860045	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000628;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000628;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03009_ch_T0000628:0;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23859747	23860045	.	-	2	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000628;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000628;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03009_ch_T0000628:0;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	23859747	23859749	.	-	0	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000628;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000628;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=stop_codon:HG03009_ch_T0000628;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23860046	23860456	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000628;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000628;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03009_ch_T0000628:0;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23860457	23860545	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000628;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000628;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03009_ch_T0000628:1;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23860457	23860545	.	-	1	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000628;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000628;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03009_ch_T0000628:1;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23860546	23860631	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000628;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000628;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03009_ch_T0000628:1;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23860632	23860742	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000628;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000628;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03009_ch_T0000628:2;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23860632	23860742	.	-	1	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000628;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000628;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03009_ch_T0000628:2;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23860743	23861663	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000628;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000628;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03009_ch_T0000628:2;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23861664	23861774	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000628;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000628;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03009_ch_T0000628:3;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23861664	23861774	.	-	1	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000628;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000628;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03009_ch_T0000628:3;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23861775	23862208	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000628;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000628;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03009_ch_T0000628:3;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23862209	23862319	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000628;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000628;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03009_ch_T0000628:4;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23862209	23862319	.	-	1	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000628;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000628;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03009_ch_T0000628:4;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23862320	23862760	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000628;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000628;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03009_ch_T0000628:4;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23862761	23862871	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000628;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000628;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03009_ch_T0000628:5;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23862761	23862871	.	-	1	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000628;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000628;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03009_ch_T0000628:5;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23862872	23863826	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000628;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000628;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03009_ch_T0000628:5;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23863827	23863941	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000628;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000628;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03009_ch_T0000628:6;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23863827	23863941	.	-	2	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000628;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000628;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03009_ch_T0000628:6;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23863942	23865951	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000628;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000628;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03009_ch_T0000628:6;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23865952	23866104	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000628;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000628;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03009_ch_T0000628:7;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23865952	23866075	.	-	0	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000628;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000628;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03009_ch_T0000628:7;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	23866073	23866075	.	-	0	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000628;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000628;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=start_codon:HG03009_ch_T0000628;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23866105	23871216	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000628;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000628;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03009_ch_T0000628:7;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23871217	23871307	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000628;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000628;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03009_ch_T0000628:8;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	23859473	23873883	100	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000629;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_G0000220;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=HG03009_ch_T0000629;Name=RBMY1E
HG03009_chrY	CAT	exon	23859473	23860045	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000629;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000629;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03009_ch_T0000629:0;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23859747	23860045	.	-	2	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000629;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000629;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03009_ch_T0000629:0;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	23859747	23859749	.	-	0	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000629;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000629;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=stop_codon:HG03009_ch_T0000629;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23860046	23860456	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000629;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000629;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03009_ch_T0000629:0;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23860457	23860545	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000629;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000629;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03009_ch_T0000629:1;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23860457	23860545	.	-	1	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000629;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000629;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03009_ch_T0000629:1;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23860546	23860631	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000629;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000629;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03009_ch_T0000629:1;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23860632	23860742	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000629;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000629;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03009_ch_T0000629:2;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23860632	23860742	.	-	1	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000629;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000629;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03009_ch_T0000629:2;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23860743	23861663	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000629;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000629;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03009_ch_T0000629:2;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23861664	23861774	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000629;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000629;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03009_ch_T0000629:3;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23861664	23861774	.	-	1	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000629;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000629;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03009_ch_T0000629:3;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23861775	23862208	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000629;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000629;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03009_ch_T0000629:3;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23862209	23862319	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000629;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000629;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03009_ch_T0000629:4;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23862209	23862319	.	-	1	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000629;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000629;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03009_ch_T0000629:4;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23862320	23862760	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000629;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000629;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03009_ch_T0000629:4;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23862761	23862871	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000629;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000629;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03009_ch_T0000629:5;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23862761	23862871	.	-	1	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000629;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000629;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03009_ch_T0000629:5;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23862872	23863826	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000629;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000629;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03009_ch_T0000629:5;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23863827	23863941	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000629;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000629;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03009_ch_T0000629:6;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23863827	23863941	.	-	2	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000629;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000629;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03009_ch_T0000629:6;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23863942	23865951	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000629;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000629;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03009_ch_T0000629:6;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23865952	23866104	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000629;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000629;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03009_ch_T0000629:7;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23865952	23866104	.	-	2	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000629;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000629;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03009_ch_T0000629:7;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23866105	23868019	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000629;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000629;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03009_ch_T0000629:7;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23868020	23868197	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000629;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000629;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03009_ch_T0000629:8;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23868020	23868197	.	-	0	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000629;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000629;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03009_ch_T0000629:8;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23868198	23871216	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000629;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000629;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03009_ch_T0000629:8;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23871217	23871320	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000629;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000629;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03009_ch_T0000629:9;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23871217	23871320	.	-	2	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000629;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000629;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03009_ch_T0000629:9;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23871321	23871796	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000629;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000629;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03009_ch_T0000629:9;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23871797	23871909	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000629;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000629;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03009_ch_T0000629:10;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23871797	23871905	.	-	0	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000629;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000629;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03009_ch_T0000629:10;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	23871903	23871905	.	-	0	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000629;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000629;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=start_codon:HG03009_ch_T0000629;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23871910	23873770	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000629;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000629;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03009_ch_T0000629:10;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23873771	23873883	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000629;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000629;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03009_ch_T0000629:11;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	23859473	23873883	100	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000630;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_G0000220;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=HG03009_ch_T0000630;Name=RBMY1E
HG03009_chrY	CAT	exon	23859473	23860045	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000630;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000630;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03009_ch_T0000630:0;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23859747	23860045	.	-	2	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000630;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000630;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03009_ch_T0000630:0;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	23859747	23859749	.	-	0	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000630;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000630;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=stop_codon:HG03009_ch_T0000630;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23860046	23860456	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000630;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000630;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03009_ch_T0000630:0;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23860457	23860545	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000630;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000630;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03009_ch_T0000630:1;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23860457	23860545	.	-	1	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000630;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000630;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03009_ch_T0000630:1;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23860546	23861663	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000630;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000630;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03009_ch_T0000630:1;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23861664	23861774	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000630;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000630;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03009_ch_T0000630:2;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23861664	23861774	.	-	1	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000630;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000630;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03009_ch_T0000630:2;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23861775	23862208	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000630;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000630;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03009_ch_T0000630:2;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23862209	23862319	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000630;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000630;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03009_ch_T0000630:3;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23862209	23862319	.	-	1	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000630;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000630;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03009_ch_T0000630:3;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23862320	23862760	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000630;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000630;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03009_ch_T0000630:3;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23862761	23862871	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000630;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000630;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03009_ch_T0000630:4;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23862761	23862871	.	-	1	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000630;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000630;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03009_ch_T0000630:4;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23862872	23863826	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000630;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000630;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03009_ch_T0000630:4;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23863827	23863941	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000630;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000630;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03009_ch_T0000630:5;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23863827	23863941	.	-	2	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000630;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000630;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03009_ch_T0000630:5;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23863942	23865951	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000630;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000630;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03009_ch_T0000630:5;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23865952	23866104	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000630;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000630;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03009_ch_T0000630:6;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23865952	23866104	.	-	2	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000630;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000630;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03009_ch_T0000630:6;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23866105	23868019	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000630;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000630;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03009_ch_T0000630:6;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23868020	23868197	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000630;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000630;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03009_ch_T0000630:7;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23868020	23868197	.	-	0	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000630;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000630;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03009_ch_T0000630:7;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23868198	23871216	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000630;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000630;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03009_ch_T0000630:7;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23871217	23871320	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000630;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000630;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03009_ch_T0000630:8;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23871217	23871320	.	-	2	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000630;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000630;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03009_ch_T0000630:8;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23871321	23871796	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000630;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000630;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03009_ch_T0000630:8;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23871797	23871909	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000630;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000630;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03009_ch_T0000630:9;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23871797	23871905	.	-	0	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000630;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000630;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03009_ch_T0000630:9;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	23871903	23871905	.	-	0	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000630;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000630;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=start_codon:HG03009_ch_T0000630;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23871910	23873770	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000630;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000630;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03009_ch_T0000630:9;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23873771	23873883	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000630;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000630;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03009_ch_T0000630:10;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	23859473	23873883	100	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000631;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_G0000220;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=HG03009_ch_T0000631;Name=RBMY1E
HG03009_chrY	CAT	exon	23859473	23860045	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000631;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000631;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03009_ch_T0000631:0;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23859747	23860045	.	-	2	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000631;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000631;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03009_ch_T0000631:0;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	23859747	23859749	.	-	0	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000631;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000631;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=stop_codon:HG03009_ch_T0000631;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23860046	23860456	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000631;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000631;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03009_ch_T0000631:0;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23860457	23860545	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000631;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000631;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03009_ch_T0000631:1;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23860457	23860545	.	-	1	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000631;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000631;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03009_ch_T0000631:1;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23860546	23862760	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000631;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000631;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03009_ch_T0000631:1;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23862761	23862871	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000631;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000631;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03009_ch_T0000631:2;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23862761	23862871	.	-	1	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000631;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000631;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03009_ch_T0000631:2;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23862872	23863826	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000631;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000631;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03009_ch_T0000631:2;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23863827	23863941	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000631;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000631;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03009_ch_T0000631:3;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23863827	23863941	.	-	2	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000631;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000631;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03009_ch_T0000631:3;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23863942	23865951	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000631;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000631;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03009_ch_T0000631:3;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23865952	23866104	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000631;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000631;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03009_ch_T0000631:4;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23865952	23866104	.	-	2	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000631;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000631;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03009_ch_T0000631:4;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23866105	23868019	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000631;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000631;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03009_ch_T0000631:4;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23868020	23868197	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000631;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000631;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03009_ch_T0000631:5;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23868020	23868197	.	-	0	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000631;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000631;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03009_ch_T0000631:5;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23868198	23871216	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000631;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000631;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03009_ch_T0000631:5;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23871217	23871320	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000631;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000631;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03009_ch_T0000631:6;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23871217	23871320	.	-	2	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000631;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000631;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03009_ch_T0000631:6;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23871321	23871796	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000631;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000631;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03009_ch_T0000631:6;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23871797	23871909	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000631;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000631;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03009_ch_T0000631:7;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	23871797	23871905	.	-	0	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000631;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000631;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03009_ch_T0000631:7;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	23871903	23871905	.	-	0	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000631;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000631;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=start_codon:HG03009_ch_T0000631;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23871910	23873770	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000631;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000631;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03009_ch_T0000631:7;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23873771	23873883	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000631;gene_id=HG03009_ch_G0000220;Parent=HG03009_ch_T0000631;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03009_ch_T0000631:8;Name=RBMY1E;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	23984202	23986199	.	+	.	source_gene_common_name=LOC107987357;source_gene=hg002_chrY_paternal_510;gene_id=HG03009_ch_G0000221;gene_biotype=lncRNA;gene_name=LOC107987357;gene_sources=liftoff;ID=HG03009_ch_G0000221;Name=LOC107987357
HG03009_chrY	CAT	transcript	23984202	23986199	1000	+	.	source_transcript=hg002_chrY_paternal_510.1;source_transcript_name=hg002_chrY_paternal_510.1;source_gene=hg002_chrY_paternal_510;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_510;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_510.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_510.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987357;transcript_id=HG03009_ch_T0000632;gene_id=HG03009_ch_G0000221;Parent=HG03009_ch_G0000221;transcript_name=hg002_chrY_paternal_510.1;gene_name=LOC107987357;ID=HG03009_ch_T0000632;Name=LOC107987357
HG03009_chrY	CAT	exon	23984202	23984284	.	+	.	source_transcript=hg002_chrY_paternal_510.1;source_transcript_name=hg002_chrY_paternal_510.1;source_gene=hg002_chrY_paternal_510;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_510;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_510.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_510.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987357;transcript_id=HG03009_ch_T0000632;gene_id=HG03009_ch_G0000221;Parent=HG03009_ch_T0000632;transcript_name=hg002_chrY_paternal_510.1;gene_name=LOC107987357;ID=exon:HG03009_ch_T0000632:0;Name=LOC107987357;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23984285	23984401	.	+	.	source_transcript=hg002_chrY_paternal_510.1;source_transcript_name=hg002_chrY_paternal_510.1;source_gene=hg002_chrY_paternal_510;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_510;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_510.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_510.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987357;transcript_id=HG03009_ch_T0000632;gene_id=HG03009_ch_G0000221;Parent=HG03009_ch_T0000632;transcript_name=hg002_chrY_paternal_510.1;gene_name=LOC107987357;ID=intron:HG03009_ch_T0000632:0;Name=LOC107987357;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23984402	23984462	.	+	.	source_transcript=hg002_chrY_paternal_510.1;source_transcript_name=hg002_chrY_paternal_510.1;source_gene=hg002_chrY_paternal_510;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_510;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_510.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_510.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987357;transcript_id=HG03009_ch_T0000632;gene_id=HG03009_ch_G0000221;Parent=HG03009_ch_T0000632;transcript_name=hg002_chrY_paternal_510.1;gene_name=LOC107987357;ID=exon:HG03009_ch_T0000632:1;Name=LOC107987357;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	23984463	23985997	.	+	.	source_transcript=hg002_chrY_paternal_510.1;source_transcript_name=hg002_chrY_paternal_510.1;source_gene=hg002_chrY_paternal_510;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_510;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_510.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_510.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987357;transcript_id=HG03009_ch_T0000632;gene_id=HG03009_ch_G0000221;Parent=HG03009_ch_T0000632;transcript_name=hg002_chrY_paternal_510.1;gene_name=LOC107987357;ID=intron:HG03009_ch_T0000632:1;Name=LOC107987357;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	23985998	23986199	.	+	.	source_transcript=hg002_chrY_paternal_510.1;source_transcript_name=hg002_chrY_paternal_510.1;source_gene=hg002_chrY_paternal_510;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_510;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_510.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_510.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987357;transcript_id=HG03009_ch_T0000632;gene_id=HG03009_ch_G0000221;Parent=HG03009_ch_T0000632;transcript_name=hg002_chrY_paternal_510.1;gene_name=LOC107987357;ID=exon:HG03009_ch_T0000632:2;Name=LOC107987357;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	24027613	24051863	.	-	.	source_gene_common_name=PRY;source_gene=hg002_chrY_paternal_486;alternative_source_transcripts=hg002_chrY_paternal_486.1;gene_id=HG03009_ch_G0000222;gene_biotype=protein_coding;gene_name=PRY;gene_sources=liftoff,augTM;ID=HG03009_ch_G0000222;Name=PRY
HG03009_chrY	CAT	transcript	24027613	24051863	100	-	.	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_486.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000633;gene_id=HG03009_ch_G0000222;Parent=HG03009_ch_G0000222;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=HG03009_ch_T0000633;Name=PRY
HG03009_chrY	CAT	exon	24027613	24028438	.	-	.	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_486.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000633;gene_id=HG03009_ch_G0000222;Parent=HG03009_ch_T0000633;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=exon:HG03009_ch_T0000633:0;Name=PRY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24028180	24028438	.	-	1	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_486.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000633;gene_id=HG03009_ch_G0000222;Parent=HG03009_ch_T0000633;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=CDS:HG03009_ch_T0000633:0;Name=PRY;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	24028180	24028182	.	-	0	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_486.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000633;gene_id=HG03009_ch_G0000222;Parent=HG03009_ch_T0000633;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=stop_codon:HG03009_ch_T0000633;Name=PRY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24028439	24037936	.	-	.	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_486.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000633;gene_id=HG03009_ch_G0000222;Parent=HG03009_ch_T0000633;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=intron:HG03009_ch_T0000633:0;Name=PRY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24037937	24038052	.	-	.	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_486.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000633;gene_id=HG03009_ch_G0000222;Parent=HG03009_ch_T0000633;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=exon:HG03009_ch_T0000633:1;Name=PRY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24037937	24038052	.	-	0	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_486.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000633;gene_id=HG03009_ch_G0000222;Parent=HG03009_ch_T0000633;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=CDS:HG03009_ch_T0000633:1;Name=PRY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24038053	24040627	.	-	.	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_486.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000633;gene_id=HG03009_ch_G0000222;Parent=HG03009_ch_T0000633;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=intron:HG03009_ch_T0000633:1;Name=PRY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24040628	24040748	.	-	.	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_486.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000633;gene_id=HG03009_ch_G0000222;Parent=HG03009_ch_T0000633;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=exon:HG03009_ch_T0000633:2;Name=PRY;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24040628	24040696	.	-	0	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_486.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000633;gene_id=HG03009_ch_G0000222;Parent=HG03009_ch_T0000633;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=CDS:HG03009_ch_T0000633:2;Name=PRY;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	24040694	24040696	.	-	0	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_486.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000633;gene_id=HG03009_ch_G0000222;Parent=HG03009_ch_T0000633;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=start_codon:HG03009_ch_T0000633;Name=PRY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24040749	24051587	.	-	.	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_486.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000633;gene_id=HG03009_ch_G0000222;Parent=HG03009_ch_T0000633;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=intron:HG03009_ch_T0000633:2;Name=PRY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24051588	24051674	.	-	.	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_486.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000633;gene_id=HG03009_ch_G0000222;Parent=HG03009_ch_T0000633;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=exon:HG03009_ch_T0000633:3;Name=PRY;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24051675	24051775	.	-	.	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_486.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000633;gene_id=HG03009_ch_G0000222;Parent=HG03009_ch_T0000633;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=intron:HG03009_ch_T0000633:3;Name=PRY;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24051776	24051863	.	-	.	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_486.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000633;gene_id=HG03009_ch_G0000222;Parent=HG03009_ch_T0000633;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=exon:HG03009_ch_T0000633:4;Name=PRY;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	24057549	24103376	.	-	.	source_gene_common_name=LOC102725532;source_gene=hg002_chrY_paternal_487;alternative_source_transcripts=hg002_chrY_paternal_487.1;gene_id=HG03009_ch_G0000223;gene_biotype=lncRNA;gene_name=LOC102725532;gene_sources=liftoff;ID=HG03009_ch_G0000223;Name=LOC102725532
HG03009_chrY	CAT	transcript	24057549	24103376	1000	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1;transcript_id=HG03009_ch_T0000634;gene_id=HG03009_ch_G0000223;Parent=HG03009_ch_G0000223;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=HG03009_ch_T0000634;Name=LOC102725532
HG03009_chrY	CAT	exon	24057549	24058226	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1;transcript_id=HG03009_ch_T0000634;gene_id=HG03009_ch_G0000223;Parent=HG03009_ch_T0000634;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=exon:HG03009_ch_T0000634:0;Name=LOC102725532;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24058227	24058741	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1;transcript_id=HG03009_ch_T0000634;gene_id=HG03009_ch_G0000223;Parent=HG03009_ch_T0000634;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=intron:HG03009_ch_T0000634:0;Name=LOC102725532;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24058742	24058859	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1;transcript_id=HG03009_ch_T0000634;gene_id=HG03009_ch_G0000223;Parent=HG03009_ch_T0000634;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=exon:HG03009_ch_T0000634:1;Name=LOC102725532;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24058860	24059403	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1;transcript_id=HG03009_ch_T0000634;gene_id=HG03009_ch_G0000223;Parent=HG03009_ch_T0000634;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=intron:HG03009_ch_T0000634:1;Name=LOC102725532;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24059404	24059600	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1;transcript_id=HG03009_ch_T0000634;gene_id=HG03009_ch_G0000223;Parent=HG03009_ch_T0000634;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=exon:HG03009_ch_T0000634:2;Name=LOC102725532;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24059601	24059720	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1;transcript_id=HG03009_ch_T0000634;gene_id=HG03009_ch_G0000223;Parent=HG03009_ch_T0000634;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=intron:HG03009_ch_T0000634:2;Name=LOC102725532;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24059721	24059806	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1;transcript_id=HG03009_ch_T0000634;gene_id=HG03009_ch_G0000223;Parent=HG03009_ch_T0000634;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=exon:HG03009_ch_T0000634:3;Name=LOC102725532;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24059807	24061606	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1;transcript_id=HG03009_ch_T0000634;gene_id=HG03009_ch_G0000223;Parent=HG03009_ch_T0000634;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=intron:HG03009_ch_T0000634:3;Name=LOC102725532;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24061607	24061942	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1;transcript_id=HG03009_ch_T0000634;gene_id=HG03009_ch_G0000223;Parent=HG03009_ch_T0000634;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=exon:HG03009_ch_T0000634:4;Name=LOC102725532;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24061943	24063408	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1;transcript_id=HG03009_ch_T0000634;gene_id=HG03009_ch_G0000223;Parent=HG03009_ch_T0000634;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=intron:HG03009_ch_T0000634:4;Name=LOC102725532;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24063409	24063498	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1;transcript_id=HG03009_ch_T0000634;gene_id=HG03009_ch_G0000223;Parent=HG03009_ch_T0000634;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=exon:HG03009_ch_T0000634:5;Name=LOC102725532;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24063499	24077127	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1;transcript_id=HG03009_ch_T0000634;gene_id=HG03009_ch_G0000223;Parent=HG03009_ch_T0000634;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=intron:HG03009_ch_T0000634:5;Name=LOC102725532;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24077128	24077481	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1;transcript_id=HG03009_ch_T0000634;gene_id=HG03009_ch_G0000223;Parent=HG03009_ch_T0000634;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=exon:HG03009_ch_T0000634:6;Name=LOC102725532;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24077482	24077911	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1;transcript_id=HG03009_ch_T0000634;gene_id=HG03009_ch_G0000223;Parent=HG03009_ch_T0000634;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=intron:HG03009_ch_T0000634:6;Name=LOC102725532;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24077912	24078030	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1;transcript_id=HG03009_ch_T0000634;gene_id=HG03009_ch_G0000223;Parent=HG03009_ch_T0000634;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=exon:HG03009_ch_T0000634:7;Name=LOC102725532;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24078031	24085208	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1;transcript_id=HG03009_ch_T0000634;gene_id=HG03009_ch_G0000223;Parent=HG03009_ch_T0000634;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=intron:HG03009_ch_T0000634:7;Name=LOC102725532;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24085209	24085294	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1;transcript_id=HG03009_ch_T0000634;gene_id=HG03009_ch_G0000223;Parent=HG03009_ch_T0000634;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=exon:HG03009_ch_T0000634:8;Name=LOC102725532;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24085295	24085602	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1;transcript_id=HG03009_ch_T0000634;gene_id=HG03009_ch_G0000223;Parent=HG03009_ch_T0000634;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=intron:HG03009_ch_T0000634:8;Name=LOC102725532;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24085603	24085825	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1;transcript_id=HG03009_ch_T0000634;gene_id=HG03009_ch_G0000223;Parent=HG03009_ch_T0000634;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=exon:HG03009_ch_T0000634:9;Name=LOC102725532;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24085826	24095787	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1;transcript_id=HG03009_ch_T0000634;gene_id=HG03009_ch_G0000223;Parent=HG03009_ch_T0000634;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=intron:HG03009_ch_T0000634:9;Name=LOC102725532;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24095788	24095928	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1;transcript_id=HG03009_ch_T0000634;gene_id=HG03009_ch_G0000223;Parent=HG03009_ch_T0000634;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=exon:HG03009_ch_T0000634:10;Name=LOC102725532;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24095929	24102475	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1;transcript_id=HG03009_ch_T0000634;gene_id=HG03009_ch_G0000223;Parent=HG03009_ch_T0000634;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=intron:HG03009_ch_T0000634:10;Name=LOC102725532;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24102476	24102785	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1;transcript_id=HG03009_ch_T0000634;gene_id=HG03009_ch_G0000223;Parent=HG03009_ch_T0000634;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=exon:HG03009_ch_T0000634:11;Name=LOC102725532;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24102786	24103119	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1;transcript_id=HG03009_ch_T0000634;gene_id=HG03009_ch_G0000223;Parent=HG03009_ch_T0000634;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=intron:HG03009_ch_T0000634:11;Name=LOC102725532;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24103120	24103376	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1;transcript_id=HG03009_ch_T0000634;gene_id=HG03009_ch_G0000223;Parent=HG03009_ch_T0000634;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=exon:HG03009_ch_T0000634:12;Name=LOC102725532;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	24100801	24102667	.	+	.	source_gene_common_name=TTTY6;source_gene=hg002_chrY_paternal_504;gene_id=HG03009_ch_G0000224;gene_biotype=lncRNA;gene_name=TTTY6;gene_sources=liftoff;ID=HG03009_ch_G0000224;Name=TTTY6
HG03009_chrY	CAT	transcript	24100801	24102667	1000	+	.	source_transcript=hg002_chrY_paternal_504.1;source_transcript_name=hg002_chrY_paternal_504.1;source_gene=hg002_chrY_paternal_504;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_504;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_504.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_504.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;transcript_id=HG03009_ch_T0000635;gene_id=HG03009_ch_G0000224;Parent=HG03009_ch_G0000224;transcript_name=hg002_chrY_paternal_504.1;gene_name=TTTY6;ID=HG03009_ch_T0000635;Name=TTTY6
HG03009_chrY	CAT	exon	24100801	24100915	.	+	.	source_transcript=hg002_chrY_paternal_504.1;source_transcript_name=hg002_chrY_paternal_504.1;source_gene=hg002_chrY_paternal_504;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_504;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_504.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_504.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;transcript_id=HG03009_ch_T0000635;gene_id=HG03009_ch_G0000224;Parent=HG03009_ch_T0000635;transcript_name=hg002_chrY_paternal_504.1;gene_name=TTTY6;ID=exon:HG03009_ch_T0000635:0;Name=TTTY6;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24100916	24101133	.	+	.	source_transcript=hg002_chrY_paternal_504.1;source_transcript_name=hg002_chrY_paternal_504.1;source_gene=hg002_chrY_paternal_504;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_504;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_504.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_504.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;transcript_id=HG03009_ch_T0000635;gene_id=HG03009_ch_G0000224;Parent=HG03009_ch_T0000635;transcript_name=hg002_chrY_paternal_504.1;gene_name=TTTY6;ID=intron:HG03009_ch_T0000635:0;Name=TTTY6;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24101134	24101271	.	+	.	source_transcript=hg002_chrY_paternal_504.1;source_transcript_name=hg002_chrY_paternal_504.1;source_gene=hg002_chrY_paternal_504;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_504;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_504.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_504.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;transcript_id=HG03009_ch_T0000635;gene_id=HG03009_ch_G0000224;Parent=HG03009_ch_T0000635;transcript_name=hg002_chrY_paternal_504.1;gene_name=TTTY6;ID=exon:HG03009_ch_T0000635:1;Name=TTTY6;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24101272	24102428	.	+	.	source_transcript=hg002_chrY_paternal_504.1;source_transcript_name=hg002_chrY_paternal_504.1;source_gene=hg002_chrY_paternal_504;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_504;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_504.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_504.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;transcript_id=HG03009_ch_T0000635;gene_id=HG03009_ch_G0000224;Parent=HG03009_ch_T0000635;transcript_name=hg002_chrY_paternal_504.1;gene_name=TTTY6;ID=intron:HG03009_ch_T0000635:1;Name=TTTY6;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24102429	24102667	.	+	.	source_transcript=hg002_chrY_paternal_504.1;source_transcript_name=hg002_chrY_paternal_504.1;source_gene=hg002_chrY_paternal_504;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_504;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_504.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_504.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;transcript_id=HG03009_ch_T0000635;gene_id=HG03009_ch_G0000224;Parent=HG03009_ch_T0000635;transcript_name=hg002_chrY_paternal_504.1;gene_name=TTTY6;ID=exon:HG03009_ch_T0000635:2;Name=TTTY6;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	24117389	24138845	.	-	.	source_gene_common_name=RBMY1J;source_gene=hg002_chrY_paternal_489;gene_id=HG03009_ch_G0000225;gene_biotype=protein_coding;gene_name=RBMY1J;gene_sources=augTM,transMap;ID=HG03009_ch_G0000225;Name=RBMY1J
HG03009_chrY	CAT	transcript	24117389	24138845	10000	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000636;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_G0000225;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=HG03009_ch_T0000636;Name=RBMY1J
HG03009_chrY	CAT	exon	24117389	24118892	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000636;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000636;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03009_ch_T0000636:0;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24118882	24118892	.	-	2	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000636;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000636;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03009_ch_T0000636:0;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	24118882	24118884	.	-	0	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000636;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000636;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=stop_codon:HG03009_ch_T0000636;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24118893	24121485	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000636;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000636;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03009_ch_T0000636:0;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24121486	24121632	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000636;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000636;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03009_ch_T0000636:1;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24121486	24121632	.	-	2	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000636;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000636;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03009_ch_T0000636:1;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24121633	24125364	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000636;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000636;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03009_ch_T0000636:1;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24125365	24125453	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000636;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000636;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03009_ch_T0000636:2;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24125365	24125453	.	-	1	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000636;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000636;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03009_ch_T0000636:2;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24125454	24125539	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000636;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000636;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03009_ch_T0000636:2;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24125540	24125650	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000636;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000636;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03009_ch_T0000636:3;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24125540	24125650	.	-	1	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000636;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000636;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03009_ch_T0000636:3;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24125651	24126573	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000636;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000636;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03009_ch_T0000636:3;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24126574	24126684	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000636;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000636;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03009_ch_T0000636:4;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24126574	24126684	.	-	1	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000636;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000636;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03009_ch_T0000636:4;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24126685	24127118	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000636;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000636;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03009_ch_T0000636:4;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24127119	24127229	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000636;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000636;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03009_ch_T0000636:5;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24127119	24127229	.	-	1	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000636;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000636;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03009_ch_T0000636:5;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24127230	24127669	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000636;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000636;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03009_ch_T0000636:5;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24127670	24127780	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000636;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000636;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03009_ch_T0000636:6;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24127670	24127780	.	-	1	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000636;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000636;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03009_ch_T0000636:6;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24127781	24128735	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000636;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000636;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03009_ch_T0000636:6;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24128736	24128850	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000636;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000636;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03009_ch_T0000636:7;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24128736	24128850	.	-	2	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000636;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000636;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03009_ch_T0000636:7;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24128851	24130860	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000636;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000636;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03009_ch_T0000636:7;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24130861	24131013	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000636;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000636;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03009_ch_T0000636:8;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24130861	24131013	.	-	2	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000636;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000636;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03009_ch_T0000636:8;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24131014	24132928	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000636;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000636;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03009_ch_T0000636:8;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24132929	24133106	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000636;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000636;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03009_ch_T0000636:9;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24132929	24133106	.	-	0	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000636;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000636;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03009_ch_T0000636:9;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24133107	24136129	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000636;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000636;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03009_ch_T0000636:9;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24136130	24136233	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000636;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000636;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03009_ch_T0000636:10;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24136130	24136233	.	-	2	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000636;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000636;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03009_ch_T0000636:10;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24136234	24136697	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000636;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000636;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03009_ch_T0000636:10;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24136698	24136810	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000636;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000636;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03009_ch_T0000636:11;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24136698	24136806	.	-	0	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000636;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000636;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03009_ch_T0000636:11;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	24136804	24136806	.	-	0	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000636;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000636;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=start_codon:HG03009_ch_T0000636;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24136811	24138671	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000636;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000636;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03009_ch_T0000636:11;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24138672	24138845	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000636;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000636;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03009_ch_T0000636:12;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	24124377	24136221	10000	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000637;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_G0000225;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=HG03009_ch_T0000637;Name=RBMY1J
HG03009_chrY	CAT	exon	24124377	24124953	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000637;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000637;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03009_ch_T0000637:0;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24124655	24124953	.	-	2	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000637;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000637;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03009_ch_T0000637:0;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	24124655	24124657	.	-	0	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000637;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000637;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=stop_codon:HG03009_ch_T0000637;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24124954	24125364	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000637;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000637;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03009_ch_T0000637:0;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24125365	24125453	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000637;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000637;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03009_ch_T0000637:1;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24125365	24125453	.	-	1	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000637;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000637;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03009_ch_T0000637:1;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24125454	24125539	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000637;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000637;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03009_ch_T0000637:1;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24125540	24125650	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000637;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000637;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03009_ch_T0000637:2;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24125540	24125650	.	-	1	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000637;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000637;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03009_ch_T0000637:2;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24125651	24126573	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000637;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000637;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03009_ch_T0000637:2;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24126574	24126684	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000637;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000637;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03009_ch_T0000637:3;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24126574	24126684	.	-	1	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000637;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000637;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03009_ch_T0000637:3;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24126685	24127118	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000637;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000637;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03009_ch_T0000637:3;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24127119	24127229	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000637;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000637;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03009_ch_T0000637:4;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24127119	24127229	.	-	1	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000637;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000637;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03009_ch_T0000637:4;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24127230	24127669	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000637;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000637;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03009_ch_T0000637:4;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24127670	24127780	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000637;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000637;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03009_ch_T0000637:5;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24127670	24127780	.	-	1	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000637;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000637;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03009_ch_T0000637:5;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24127781	24128735	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000637;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000637;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03009_ch_T0000637:5;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24128736	24128850	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000637;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000637;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03009_ch_T0000637:6;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24128736	24128850	.	-	2	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000637;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000637;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03009_ch_T0000637:6;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24128851	24130860	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000637;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000637;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03009_ch_T0000637:6;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24130861	24131013	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000637;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000637;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03009_ch_T0000637:7;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24130861	24130984	.	-	0	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000637;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000637;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03009_ch_T0000637:7;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	24130982	24130984	.	-	0	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000637;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000637;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=start_codon:HG03009_ch_T0000637;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24131014	24136129	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000637;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000637;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03009_ch_T0000637:7;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24136130	24136221	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000637;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000637;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03009_ch_T0000637:8;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	24124377	24138845	10000	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000638;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_G0000225;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=HG03009_ch_T0000638;Name=RBMY1J
HG03009_chrY	CAT	exon	24124377	24124953	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000638;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000638;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03009_ch_T0000638:0;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24124655	24124953	.	-	2	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000638;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000638;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03009_ch_T0000638:0;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	24124655	24124657	.	-	0	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000638;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000638;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=stop_codon:HG03009_ch_T0000638;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24124954	24125364	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000638;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000638;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03009_ch_T0000638:0;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24125365	24125453	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000638;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000638;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03009_ch_T0000638:1;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24125365	24125453	.	-	1	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000638;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000638;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03009_ch_T0000638:1;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24125454	24125539	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000638;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000638;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03009_ch_T0000638:1;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24125540	24125650	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000638;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000638;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03009_ch_T0000638:2;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24125540	24125650	.	-	1	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000638;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000638;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03009_ch_T0000638:2;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24125651	24126573	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000638;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000638;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03009_ch_T0000638:2;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24126574	24126684	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000638;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000638;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03009_ch_T0000638:3;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24126574	24126684	.	-	1	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000638;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000638;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03009_ch_T0000638:3;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24126685	24127118	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000638;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000638;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03009_ch_T0000638:3;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24127119	24127229	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000638;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000638;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03009_ch_T0000638:4;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24127119	24127229	.	-	1	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000638;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000638;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03009_ch_T0000638:4;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24127230	24127669	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000638;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000638;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03009_ch_T0000638:4;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24127670	24127780	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000638;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000638;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03009_ch_T0000638:5;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24127670	24127780	.	-	1	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000638;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000638;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03009_ch_T0000638:5;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24127781	24128735	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000638;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000638;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03009_ch_T0000638:5;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24128736	24128850	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000638;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000638;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03009_ch_T0000638:6;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24128736	24128850	.	-	2	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000638;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000638;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03009_ch_T0000638:6;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24128851	24130860	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000638;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000638;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03009_ch_T0000638:6;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24130861	24131013	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000638;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000638;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03009_ch_T0000638:7;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24130861	24131013	.	-	2	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000638;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000638;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03009_ch_T0000638:7;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24131014	24132928	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000638;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000638;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03009_ch_T0000638:7;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24132929	24133106	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000638;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000638;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03009_ch_T0000638:8;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24132929	24133106	.	-	0	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000638;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000638;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03009_ch_T0000638:8;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24133107	24136129	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000638;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000638;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03009_ch_T0000638:8;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24136130	24136233	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000638;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000638;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03009_ch_T0000638:9;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24136130	24136233	.	-	2	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000638;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000638;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03009_ch_T0000638:9;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24136234	24136697	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000638;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000638;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03009_ch_T0000638:9;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24136698	24136810	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000638;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000638;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03009_ch_T0000638:10;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24136698	24136806	.	-	0	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000638;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000638;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03009_ch_T0000638:10;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	24136804	24136806	.	-	0	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000638;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000638;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=start_codon:HG03009_ch_T0000638;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24136811	24138671	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000638;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000638;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03009_ch_T0000638:10;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24138672	24138845	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000638;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000638;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03009_ch_T0000638:11;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	24124377	24138845	10000	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000639;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_G0000225;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=HG03009_ch_T0000639;Name=RBMY1J
HG03009_chrY	CAT	exon	24124377	24124953	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000639;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000639;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03009_ch_T0000639:0;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24124655	24124953	.	-	2	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000639;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000639;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03009_ch_T0000639:0;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	24124655	24124657	.	-	0	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000639;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000639;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=stop_codon:HG03009_ch_T0000639;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24124954	24125364	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000639;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000639;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03009_ch_T0000639:0;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24125365	24125453	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000639;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000639;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03009_ch_T0000639:1;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24125365	24125453	.	-	1	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000639;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000639;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03009_ch_T0000639:1;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24125454	24126573	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000639;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000639;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03009_ch_T0000639:1;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24126574	24126684	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000639;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000639;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03009_ch_T0000639:2;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24126574	24126684	.	-	1	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000639;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000639;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03009_ch_T0000639:2;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24126685	24127118	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000639;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000639;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03009_ch_T0000639:2;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24127119	24127229	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000639;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000639;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03009_ch_T0000639:3;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24127119	24127229	.	-	1	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000639;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000639;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03009_ch_T0000639:3;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24127230	24127669	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000639;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000639;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03009_ch_T0000639:3;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24127670	24127780	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000639;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000639;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03009_ch_T0000639:4;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24127670	24127780	.	-	1	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000639;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000639;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03009_ch_T0000639:4;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24127781	24128735	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000639;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000639;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03009_ch_T0000639:4;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24128736	24128850	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000639;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000639;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03009_ch_T0000639:5;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24128736	24128850	.	-	2	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000639;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000639;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03009_ch_T0000639:5;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24128851	24130860	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000639;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000639;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03009_ch_T0000639:5;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24130861	24131013	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000639;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000639;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03009_ch_T0000639:6;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24130861	24131013	.	-	2	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000639;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000639;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03009_ch_T0000639:6;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24131014	24132928	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000639;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000639;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03009_ch_T0000639:6;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24132929	24133106	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000639;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000639;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03009_ch_T0000639:7;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24132929	24133106	.	-	0	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000639;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000639;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03009_ch_T0000639:7;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24133107	24136129	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000639;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000639;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03009_ch_T0000639:7;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24136130	24136233	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000639;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000639;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03009_ch_T0000639:8;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24136130	24136233	.	-	2	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000639;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000639;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03009_ch_T0000639:8;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24136234	24136697	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000639;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000639;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03009_ch_T0000639:8;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24136698	24136810	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000639;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000639;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03009_ch_T0000639:9;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24136698	24136806	.	-	0	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000639;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000639;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03009_ch_T0000639:9;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	24136804	24136806	.	-	0	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000639;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000639;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=start_codon:HG03009_ch_T0000639;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24136811	24138671	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000639;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000639;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03009_ch_T0000639:9;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24138672	24138845	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000639;gene_id=HG03009_ch_G0000225;Parent=HG03009_ch_T0000639;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03009_ch_T0000639:10;Name=RBMY1J;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	24252719	24254797	.	-	.	source_gene_common_name=TTTY5;source_gene=hg002_chrY_paternal_497;alternative_source_transcripts=hg002_chrY_paternal_497.1;gene_id=HG03009_ch_G0000226;gene_biotype=lncRNA;gene_name=TTTY5;gene_sources=liftoff;ID=HG03009_ch_G0000226;Name=TTTY5
HG03009_chrY	CAT	transcript	24252719	24254797	1000	-	.	source_transcript=hg002_chrY_paternal_497.1;source_transcript_name=hg002_chrY_paternal_497.1;source_gene=hg002_chrY_paternal_497;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_497;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_497.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_497.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY5;alternative_source_transcripts=hg002_chrY_paternal_497.1;transcript_id=HG03009_ch_T0000640;gene_id=HG03009_ch_G0000226;Parent=HG03009_ch_G0000226;transcript_name=hg002_chrY_paternal_497.1;gene_name=TTTY5;ID=HG03009_ch_T0000640;Name=TTTY5
HG03009_chrY	CAT	exon	24252719	24253709	.	-	.	source_transcript=hg002_chrY_paternal_497.1;source_transcript_name=hg002_chrY_paternal_497.1;source_gene=hg002_chrY_paternal_497;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_497;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_497.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_497.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY5;alternative_source_transcripts=hg002_chrY_paternal_497.1;transcript_id=HG03009_ch_T0000640;gene_id=HG03009_ch_G0000226;Parent=HG03009_ch_T0000640;transcript_name=hg002_chrY_paternal_497.1;gene_name=TTTY5;ID=exon:HG03009_ch_T0000640:0;Name=TTTY5;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24253710	24254226	.	-	.	source_transcript=hg002_chrY_paternal_497.1;source_transcript_name=hg002_chrY_paternal_497.1;source_gene=hg002_chrY_paternal_497;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_497;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_497.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_497.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY5;alternative_source_transcripts=hg002_chrY_paternal_497.1;transcript_id=HG03009_ch_T0000640;gene_id=HG03009_ch_G0000226;Parent=HG03009_ch_T0000640;transcript_name=hg002_chrY_paternal_497.1;gene_name=TTTY5;ID=intron:HG03009_ch_T0000640:0;Name=TTTY5;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24254227	24254797	.	-	.	source_transcript=hg002_chrY_paternal_497.1;source_transcript_name=hg002_chrY_paternal_497.1;source_gene=hg002_chrY_paternal_497;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_497;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_497.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_497.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY5;alternative_source_transcripts=hg002_chrY_paternal_497.1;transcript_id=HG03009_ch_T0000640;gene_id=HG03009_ch_G0000226;Parent=HG03009_ch_T0000640;transcript_name=hg002_chrY_paternal_497.1;gene_name=TTTY5;ID=exon:HG03009_ch_T0000640:1;Name=TTTY5;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	24264784	24272130	.	+	.	source_gene_common_name=RBMY2FP;source_gene=hg002_chrY_paternal_495;alternative_source_transcripts=hg002_chrY_paternal_495.1;gene_id=HG03009_ch_G0000227;gene_biotype=transcribed_pseudogene;gene_name=RBMY2FP;gene_sources=liftoff;ID=HG03009_ch_G0000227;Name=RBMY2FP
HG03009_chrY	CAT	transcript	24264784	24272130	1000	+	.	source_transcript=hg002_chrY_paternal_495.1;source_transcript_name=hg002_chrY_paternal_495.1;source_gene=hg002_chrY_paternal_495;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_495;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_495.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_495.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;alternative_source_transcripts=hg002_chrY_paternal_495.1;transcript_id=HG03009_ch_T0000641;gene_id=HG03009_ch_G0000227;Parent=HG03009_ch_G0000227;transcript_name=hg002_chrY_paternal_495.1;gene_name=RBMY2FP;ID=HG03009_ch_T0000641;Name=RBMY2FP
HG03009_chrY	CAT	exon	24264784	24264895	.	+	.	source_transcript=hg002_chrY_paternal_495.1;source_transcript_name=hg002_chrY_paternal_495.1;source_gene=hg002_chrY_paternal_495;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_495;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_495.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_495.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;alternative_source_transcripts=hg002_chrY_paternal_495.1;transcript_id=HG03009_ch_T0000641;gene_id=HG03009_ch_G0000227;Parent=HG03009_ch_T0000641;transcript_name=hg002_chrY_paternal_495.1;gene_name=RBMY2FP;ID=exon:HG03009_ch_T0000641:0;Name=RBMY2FP;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24264896	24266784	.	+	.	source_transcript=hg002_chrY_paternal_495.1;source_transcript_name=hg002_chrY_paternal_495.1;source_gene=hg002_chrY_paternal_495;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_495;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_495.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_495.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;alternative_source_transcripts=hg002_chrY_paternal_495.1;transcript_id=HG03009_ch_T0000641;gene_id=HG03009_ch_G0000227;Parent=HG03009_ch_T0000641;transcript_name=hg002_chrY_paternal_495.1;gene_name=RBMY2FP;ID=intron:HG03009_ch_T0000641:0;Name=RBMY2FP;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24266785	24266897	.	+	.	source_transcript=hg002_chrY_paternal_495.1;source_transcript_name=hg002_chrY_paternal_495.1;source_gene=hg002_chrY_paternal_495;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_495;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_495.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_495.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;alternative_source_transcripts=hg002_chrY_paternal_495.1;transcript_id=HG03009_ch_T0000641;gene_id=HG03009_ch_G0000227;Parent=HG03009_ch_T0000641;transcript_name=hg002_chrY_paternal_495.1;gene_name=RBMY2FP;ID=exon:HG03009_ch_T0000641:1;Name=RBMY2FP;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24266898	24267319	.	+	.	source_transcript=hg002_chrY_paternal_495.1;source_transcript_name=hg002_chrY_paternal_495.1;source_gene=hg002_chrY_paternal_495;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_495;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_495.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_495.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;alternative_source_transcripts=hg002_chrY_paternal_495.1;transcript_id=HG03009_ch_T0000641;gene_id=HG03009_ch_G0000227;Parent=HG03009_ch_T0000641;transcript_name=hg002_chrY_paternal_495.1;gene_name=RBMY2FP;ID=intron:HG03009_ch_T0000641:1;Name=RBMY2FP;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24267320	24267423	.	+	.	source_transcript=hg002_chrY_paternal_495.1;source_transcript_name=hg002_chrY_paternal_495.1;source_gene=hg002_chrY_paternal_495;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_495;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_495.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_495.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;alternative_source_transcripts=hg002_chrY_paternal_495.1;transcript_id=HG03009_ch_T0000641;gene_id=HG03009_ch_G0000227;Parent=HG03009_ch_T0000641;transcript_name=hg002_chrY_paternal_495.1;gene_name=RBMY2FP;ID=exon:HG03009_ch_T0000641:2;Name=RBMY2FP;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24267424	24270417	.	+	.	source_transcript=hg002_chrY_paternal_495.1;source_transcript_name=hg002_chrY_paternal_495.1;source_gene=hg002_chrY_paternal_495;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_495;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_495.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_495.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;alternative_source_transcripts=hg002_chrY_paternal_495.1;transcript_id=HG03009_ch_T0000641;gene_id=HG03009_ch_G0000227;Parent=HG03009_ch_T0000641;transcript_name=hg002_chrY_paternal_495.1;gene_name=RBMY2FP;ID=intron:HG03009_ch_T0000641:2;Name=RBMY2FP;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24270418	24272130	.	+	.	source_transcript=hg002_chrY_paternal_495.1;source_transcript_name=hg002_chrY_paternal_495.1;source_gene=hg002_chrY_paternal_495;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_495;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_495.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_495.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;alternative_source_transcripts=hg002_chrY_paternal_495.1;transcript_id=HG03009_ch_T0000641;gene_id=HG03009_ch_G0000227;Parent=HG03009_ch_T0000641;transcript_name=hg002_chrY_paternal_495.1;gene_name=RBMY2FP;ID=exon:HG03009_ch_T0000641:3;Name=RBMY2FP;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	24272603	24276309	.	+	.	source_gene_common_name=LOC100652931;source_gene=hg002_chrY_paternal_494;alternative_source_transcripts=hg002_chrY_paternal_494.1;gene_id=HG03009_ch_G0000228;gene_biotype=transcribed_pseudogene;gene_name=LOC100652931;gene_sources=liftoff;ID=HG03009_ch_G0000228;Name=LOC100652931
HG03009_chrY	CAT	transcript	24272603	24276309	1000	+	.	source_transcript=hg002_chrY_paternal_494.1;source_transcript_name=hg002_chrY_paternal_494.1;source_gene=hg002_chrY_paternal_494;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_494;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_494.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_494.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC100652931;alternative_source_transcripts=hg002_chrY_paternal_494.1;transcript_id=HG03009_ch_T0000642;gene_id=HG03009_ch_G0000228;Parent=HG03009_ch_G0000228;transcript_name=hg002_chrY_paternal_494.1;gene_name=LOC100652931;ID=HG03009_ch_T0000642;Name=LOC100652931
HG03009_chrY	CAT	exon	24272603	24272672	.	+	.	source_transcript=hg002_chrY_paternal_494.1;source_transcript_name=hg002_chrY_paternal_494.1;source_gene=hg002_chrY_paternal_494;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_494;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_494.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_494.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC100652931;alternative_source_transcripts=hg002_chrY_paternal_494.1;transcript_id=HG03009_ch_T0000642;gene_id=HG03009_ch_G0000228;Parent=HG03009_ch_T0000642;transcript_name=hg002_chrY_paternal_494.1;gene_name=LOC100652931;ID=exon:HG03009_ch_T0000642:0;Name=LOC100652931;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24272673	24274707	.	+	.	source_transcript=hg002_chrY_paternal_494.1;source_transcript_name=hg002_chrY_paternal_494.1;source_gene=hg002_chrY_paternal_494;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_494;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_494.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_494.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC100652931;alternative_source_transcripts=hg002_chrY_paternal_494.1;transcript_id=HG03009_ch_T0000642;gene_id=HG03009_ch_G0000228;Parent=HG03009_ch_T0000642;transcript_name=hg002_chrY_paternal_494.1;gene_name=LOC100652931;ID=intron:HG03009_ch_T0000642:0;Name=LOC100652931;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24274708	24274822	.	+	.	source_transcript=hg002_chrY_paternal_494.1;source_transcript_name=hg002_chrY_paternal_494.1;source_gene=hg002_chrY_paternal_494;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_494;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_494.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_494.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC100652931;alternative_source_transcripts=hg002_chrY_paternal_494.1;transcript_id=HG03009_ch_T0000642;gene_id=HG03009_ch_G0000228;Parent=HG03009_ch_T0000642;transcript_name=hg002_chrY_paternal_494.1;gene_name=LOC100652931;ID=exon:HG03009_ch_T0000642:1;Name=LOC100652931;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24274823	24276287	.	+	.	source_transcript=hg002_chrY_paternal_494.1;source_transcript_name=hg002_chrY_paternal_494.1;source_gene=hg002_chrY_paternal_494;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_494;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_494.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_494.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC100652931;alternative_source_transcripts=hg002_chrY_paternal_494.1;transcript_id=HG03009_ch_T0000642;gene_id=HG03009_ch_G0000228;Parent=HG03009_ch_T0000642;transcript_name=hg002_chrY_paternal_494.1;gene_name=LOC100652931;ID=intron:HG03009_ch_T0000642:1;Name=LOC100652931;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24276288	24276309	.	+	.	source_transcript=hg002_chrY_paternal_494.1;source_transcript_name=hg002_chrY_paternal_494.1;source_gene=hg002_chrY_paternal_494;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_494;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_494.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_494.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC100652931;alternative_source_transcripts=hg002_chrY_paternal_494.1;transcript_id=HG03009_ch_T0000642;gene_id=HG03009_ch_G0000228;Parent=HG03009_ch_T0000642;transcript_name=hg002_chrY_paternal_494.1;gene_name=LOC100652931;ID=exon:HG03009_ch_T0000642:2;Name=LOC100652931;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	24359418	24379460	.	+	.	source_gene_common_name=RBMY1F;source_gene=hg002_chrY_paternal_502;gene_id=HG03009_ch_G0000229;gene_biotype=protein_coding;gene_name=RBMY1F;gene_sources=augTM,transMap;ID=HG03009_ch_G0000229;Name=RBMY1F
HG03009_chrY	CAT	transcript	24359418	24373803	10000	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000643;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_G0000229;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=HG03009_ch_T0000643;Name=RBMY1F
HG03009_chrY	CAT	exon	24359418	24359506	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000643;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000643;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03009_ch_T0000643:0;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24359507	24361367	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000643;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000643;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03009_ch_T0000643:0;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24361368	24361480	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000643;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000643;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03009_ch_T0000643:1;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24361372	24361480	.	+	0	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000643;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000643;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03009_ch_T0000643:0;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	24361372	24361374	.	+	0	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000643;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000643;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=start_codon:HG03009_ch_T0000643;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24361481	24361946	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000643;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000643;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03009_ch_T0000643:1;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24361947	24362050	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000643;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000643;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03009_ch_T0000643:2;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24361947	24362050	.	+	2	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000643;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000643;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03009_ch_T0000643:1;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24362051	24365073	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000643;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000643;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03009_ch_T0000643:2;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24365074	24365251	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000643;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000643;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03009_ch_T0000643:3;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24365074	24365251	.	+	0	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000643;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000643;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03009_ch_T0000643:2;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24365252	24367166	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000643;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000643;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03009_ch_T0000643:3;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24367167	24367319	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000643;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000643;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03009_ch_T0000643:4;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24367167	24367319	.	+	2	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000643;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000643;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03009_ch_T0000643:3;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24367320	24369329	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000643;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000643;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03009_ch_T0000643:4;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24369330	24369444	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000643;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000643;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03009_ch_T0000643:5;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24369330	24369444	.	+	2	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000643;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000643;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03009_ch_T0000643:4;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24369445	24370399	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000643;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000643;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03009_ch_T0000643:5;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24370400	24370510	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000643;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000643;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03009_ch_T0000643:6;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24370400	24370510	.	+	1	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000643;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000643;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03009_ch_T0000643:5;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24370511	24370950	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000643;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000643;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03009_ch_T0000643:6;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24370951	24371061	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000643;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000643;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03009_ch_T0000643:7;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24370951	24371061	.	+	1	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000643;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000643;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03009_ch_T0000643:6;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24371062	24371495	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000643;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000643;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03009_ch_T0000643:7;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24371496	24371606	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000643;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000643;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03009_ch_T0000643:8;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24371496	24371606	.	+	1	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000643;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000643;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03009_ch_T0000643:7;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24371607	24372529	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000643;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000643;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03009_ch_T0000643:8;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24372530	24372640	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000643;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000643;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03009_ch_T0000643:9;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24372530	24372640	.	+	1	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000643;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000643;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03009_ch_T0000643:8;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24372641	24372726	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000643;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000643;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03009_ch_T0000643:9;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24372727	24372810	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000643;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000643;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03009_ch_T0000643:10;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24372727	24372810	.	+	1	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000643;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000643;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03009_ch_T0000643:9;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24372811	24373226	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000643;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000643;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03009_ch_T0000643:10;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24373227	24373803	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000643;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000643;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03009_ch_T0000643:11;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24373227	24373299	.	+	1	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000643;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000643;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03009_ch_T0000643:10;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	24373297	24373299	.	+	0	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000643;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000643;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=stop_codon:HG03009_ch_T0000643;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	24359418	24373803	10000	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000644;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_G0000229;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=HG03009_ch_T0000644;Name=RBMY1F
HG03009_chrY	CAT	exon	24359418	24359506	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000644;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000644;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03009_ch_T0000644:0;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24359507	24361367	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000644;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000644;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03009_ch_T0000644:0;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24361368	24361480	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000644;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000644;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03009_ch_T0000644:1;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24361372	24361480	.	+	0	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000644;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000644;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03009_ch_T0000644:0;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	24361372	24361374	.	+	0	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000644;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000644;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=start_codon:HG03009_ch_T0000644;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24361481	24361946	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000644;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000644;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03009_ch_T0000644:1;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24361947	24362050	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000644;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000644;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03009_ch_T0000644:2;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24361947	24362050	.	+	2	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000644;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000644;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03009_ch_T0000644:1;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24362051	24365073	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000644;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000644;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03009_ch_T0000644:2;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24365074	24365251	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000644;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000644;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03009_ch_T0000644:3;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24365074	24365251	.	+	0	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000644;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000644;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03009_ch_T0000644:2;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24365252	24367166	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000644;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000644;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03009_ch_T0000644:3;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24367167	24367319	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000644;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000644;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03009_ch_T0000644:4;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24367167	24367319	.	+	2	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000644;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000644;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03009_ch_T0000644:3;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24367320	24369329	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000644;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000644;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03009_ch_T0000644:4;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24369330	24369444	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000644;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000644;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03009_ch_T0000644:5;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24369330	24369444	.	+	2	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000644;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000644;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03009_ch_T0000644:4;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24369445	24370399	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000644;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000644;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03009_ch_T0000644:5;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24370400	24370510	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000644;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000644;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03009_ch_T0000644:6;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24370400	24370510	.	+	1	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000644;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000644;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03009_ch_T0000644:5;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24370511	24370950	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000644;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000644;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03009_ch_T0000644:6;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24370951	24371061	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000644;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000644;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03009_ch_T0000644:7;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24370951	24371061	.	+	1	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000644;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000644;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03009_ch_T0000644:6;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24371062	24371495	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000644;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000644;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03009_ch_T0000644:7;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24371496	24371606	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000644;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000644;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03009_ch_T0000644:8;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24371496	24371606	.	+	1	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000644;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000644;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03009_ch_T0000644:7;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24371607	24372726	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000644;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000644;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03009_ch_T0000644:8;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24372727	24372815	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000644;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000644;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03009_ch_T0000644:9;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24372727	24372815	.	+	1	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000644;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000644;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03009_ch_T0000644:8;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24372816	24373226	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000644;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000644;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03009_ch_T0000644:9;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24373227	24373803	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000644;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000644;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03009_ch_T0000644:10;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24373227	24373525	.	+	2	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000644;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000644;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03009_ch_T0000644:9;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	24373523	24373525	.	+	0	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000644;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000644;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=stop_codon:HG03009_ch_T0000644;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	24359418	24373803	10000	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000645;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_G0000229;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=HG03009_ch_T0000645;Name=RBMY1F
HG03009_chrY	CAT	exon	24359418	24359506	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000645;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000645;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03009_ch_T0000645:0;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24359507	24361367	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000645;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000645;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03009_ch_T0000645:0;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24361368	24361480	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000645;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000645;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03009_ch_T0000645:1;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24361372	24361480	.	+	0	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000645;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000645;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03009_ch_T0000645:0;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	24361372	24361374	.	+	0	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000645;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000645;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=start_codon:HG03009_ch_T0000645;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24361481	24361946	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000645;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000645;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03009_ch_T0000645:1;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24361947	24362050	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000645;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000645;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03009_ch_T0000645:2;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24361947	24362050	.	+	2	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000645;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000645;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03009_ch_T0000645:1;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24362051	24365073	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000645;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000645;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03009_ch_T0000645:2;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24365074	24365251	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000645;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000645;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03009_ch_T0000645:3;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24365074	24365251	.	+	0	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000645;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000645;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03009_ch_T0000645:2;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24365252	24367166	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000645;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000645;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03009_ch_T0000645:3;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24367167	24367319	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000645;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000645;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03009_ch_T0000645:4;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24367167	24367319	.	+	2	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000645;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000645;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03009_ch_T0000645:3;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24367320	24369329	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000645;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000645;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03009_ch_T0000645:4;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24369330	24369444	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000645;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000645;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03009_ch_T0000645:5;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24369330	24369444	.	+	2	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000645;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000645;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03009_ch_T0000645:4;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24369445	24370399	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000645;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000645;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03009_ch_T0000645:5;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24370400	24370510	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000645;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000645;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03009_ch_T0000645:6;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24370400	24370510	.	+	1	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000645;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000645;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03009_ch_T0000645:5;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24370511	24370950	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000645;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000645;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03009_ch_T0000645:6;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24370951	24371061	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000645;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000645;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03009_ch_T0000645:7;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24370951	24371061	.	+	1	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000645;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000645;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03009_ch_T0000645:6;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24371062	24371495	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000645;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000645;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03009_ch_T0000645:7;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24371496	24371606	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000645;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000645;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03009_ch_T0000645:8;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24371496	24371606	.	+	1	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000645;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000645;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03009_ch_T0000645:7;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24371607	24372529	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000645;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000645;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03009_ch_T0000645:8;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24372530	24372640	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000645;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000645;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03009_ch_T0000645:9;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24372530	24372640	.	+	1	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000645;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000645;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03009_ch_T0000645:8;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24372641	24372726	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000645;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000645;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03009_ch_T0000645:9;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24372727	24372815	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000645;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000645;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03009_ch_T0000645:10;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24372727	24372815	.	+	1	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000645;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000645;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03009_ch_T0000645:9;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24372816	24373226	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000645;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000645;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03009_ch_T0000645:10;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24373227	24373803	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000645;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000645;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03009_ch_T0000645:11;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24373227	24373525	.	+	2	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000645;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000645;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03009_ch_T0000645:10;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	24373523	24373525	.	+	0	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000645;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000645;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=stop_codon:HG03009_ch_T0000645;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	24359418	24379460	10000	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000646;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_G0000229;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=HG03009_ch_T0000646;Name=RBMY1F
HG03009_chrY	CAT	exon	24359418	24359506	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000646;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000646;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03009_ch_T0000646:0;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24359507	24361367	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000646;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000646;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03009_ch_T0000646:0;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24361368	24361480	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000646;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000646;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03009_ch_T0000646:1;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24361372	24361480	.	+	0	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000646;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000646;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03009_ch_T0000646:0;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	24361372	24361374	.	+	0	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000646;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000646;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=start_codon:HG03009_ch_T0000646;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24361481	24361946	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000646;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000646;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03009_ch_T0000646:1;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24361947	24362050	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000646;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000646;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03009_ch_T0000646:2;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24361947	24362050	.	+	2	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000646;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000646;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03009_ch_T0000646:1;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24362051	24365073	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000646;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000646;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03009_ch_T0000646:2;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24365074	24365251	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000646;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000646;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03009_ch_T0000646:3;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24365074	24365251	.	+	0	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000646;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000646;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03009_ch_T0000646:2;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24365252	24367166	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000646;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000646;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03009_ch_T0000646:3;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24367167	24367319	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000646;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000646;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03009_ch_T0000646:4;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24367167	24367319	.	+	2	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000646;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000646;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03009_ch_T0000646:3;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24367320	24369329	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000646;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000646;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03009_ch_T0000646:4;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24369330	24369444	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000646;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000646;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03009_ch_T0000646:5;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24369330	24369444	.	+	2	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000646;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000646;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03009_ch_T0000646:4;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24369445	24370399	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000646;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000646;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03009_ch_T0000646:5;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24370400	24370510	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000646;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000646;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03009_ch_T0000646:6;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24370400	24370510	.	+	1	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000646;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000646;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03009_ch_T0000646:5;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24370511	24370950	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000646;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000646;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03009_ch_T0000646:6;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24370951	24371061	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000646;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000646;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03009_ch_T0000646:7;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24370951	24371061	.	+	1	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000646;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000646;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03009_ch_T0000646:6;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24371062	24371495	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000646;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000646;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03009_ch_T0000646:7;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24371496	24371606	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000646;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000646;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03009_ch_T0000646:8;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24371496	24371606	.	+	1	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000646;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000646;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03009_ch_T0000646:7;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24371607	24372529	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000646;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000646;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03009_ch_T0000646:8;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24372530	24372640	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000646;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000646;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03009_ch_T0000646:9;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24372530	24372640	.	+	1	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000646;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000646;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03009_ch_T0000646:8;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24372641	24372726	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000646;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000646;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03009_ch_T0000646:9;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24372727	24372815	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000646;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000646;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03009_ch_T0000646:10;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24372727	24372815	.	+	1	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000646;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000646;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03009_ch_T0000646:9;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24372816	24376548	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000646;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000646;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03009_ch_T0000646:10;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24376549	24376695	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000646;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000646;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03009_ch_T0000646:11;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24376549	24376695	.	+	2	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000646;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000646;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03009_ch_T0000646:10;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24376696	24379288	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000646;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000646;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03009_ch_T0000646:11;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24379289	24379460	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000646;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000646;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03009_ch_T0000646:12;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24379289	24379299	.	+	2	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000646;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000646;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03009_ch_T0000646:11;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	24379297	24379299	.	+	0	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000646;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000646;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=stop_codon:HG03009_ch_T0000646;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	24359418	24379460	10000	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000647;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_G0000229;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=HG03009_ch_T0000647;Name=RBMY1F
HG03009_chrY	CAT	exon	24359418	24359506	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000647;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000647;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03009_ch_T0000647:0;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24359507	24361367	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000647;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000647;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03009_ch_T0000647:0;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24361368	24361480	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000647;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000647;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03009_ch_T0000647:1;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24361372	24361480	.	+	0	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000647;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000647;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03009_ch_T0000647:0;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	24361372	24361374	.	+	0	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000647;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000647;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=start_codon:HG03009_ch_T0000647;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24361481	24361946	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000647;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000647;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03009_ch_T0000647:1;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24361947	24362050	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000647;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000647;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03009_ch_T0000647:2;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24361947	24362050	.	+	2	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000647;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000647;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03009_ch_T0000647:1;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24362051	24365073	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000647;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000647;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03009_ch_T0000647:2;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24365074	24365251	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000647;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000647;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03009_ch_T0000647:3;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24365074	24365251	.	+	0	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000647;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000647;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03009_ch_T0000647:2;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24365252	24367166	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000647;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000647;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03009_ch_T0000647:3;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24367167	24367319	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000647;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000647;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03009_ch_T0000647:4;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24367167	24367319	.	+	2	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000647;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000647;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03009_ch_T0000647:3;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24367320	24369329	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000647;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000647;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03009_ch_T0000647:4;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24369330	24369444	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000647;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000647;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03009_ch_T0000647:5;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24369330	24369444	.	+	2	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000647;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000647;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03009_ch_T0000647:4;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24369445	24370399	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000647;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000647;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03009_ch_T0000647:5;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24370400	24370510	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000647;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000647;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03009_ch_T0000647:6;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24370400	24370510	.	+	1	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000647;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000647;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03009_ch_T0000647:5;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24370511	24370950	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000647;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000647;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03009_ch_T0000647:6;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24370951	24371061	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000647;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000647;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03009_ch_T0000647:7;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24370951	24371061	.	+	1	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000647;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000647;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03009_ch_T0000647:6;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24371062	24371495	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000647;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000647;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03009_ch_T0000647:7;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24371496	24371606	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000647;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000647;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03009_ch_T0000647:8;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24371496	24371606	.	+	1	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000647;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000647;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03009_ch_T0000647:7;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24371607	24372726	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000647;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000647;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03009_ch_T0000647:8;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24372727	24372815	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000647;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000647;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03009_ch_T0000647:9;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24372727	24372815	.	+	1	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000647;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000647;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03009_ch_T0000647:8;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24372816	24376548	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000647;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000647;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03009_ch_T0000647:9;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24376549	24376695	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000647;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000647;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03009_ch_T0000647:10;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24376549	24376695	.	+	2	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000647;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000647;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03009_ch_T0000647:9;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24376696	24379288	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000647;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000647;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03009_ch_T0000647:10;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24379289	24379460	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000647;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000647;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03009_ch_T0000647:11;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24379289	24379299	.	+	2	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000647;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000647;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03009_ch_T0000647:10;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	24379297	24379299	.	+	0	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000647;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000647;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=stop_codon:HG03009_ch_T0000647;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	24359418	24379460	10000	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000648;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_G0000229;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=HG03009_ch_T0000648;Name=RBMY1F
HG03009_chrY	CAT	exon	24359418	24359506	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000648;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000648;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03009_ch_T0000648:0;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24359507	24361367	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000648;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000648;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03009_ch_T0000648:0;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24361368	24361480	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000648;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000648;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03009_ch_T0000648:1;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24361372	24361480	.	+	0	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000648;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000648;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03009_ch_T0000648:0;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	24361372	24361374	.	+	0	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000648;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000648;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=start_codon:HG03009_ch_T0000648;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24361481	24361946	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000648;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000648;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03009_ch_T0000648:1;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24361947	24362050	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000648;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000648;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03009_ch_T0000648:2;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24361947	24362050	.	+	2	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000648;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000648;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03009_ch_T0000648:1;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24362051	24365073	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000648;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000648;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03009_ch_T0000648:2;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24365074	24365251	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000648;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000648;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03009_ch_T0000648:3;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24365074	24365251	.	+	0	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000648;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000648;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03009_ch_T0000648:2;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24365252	24367166	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000648;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000648;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03009_ch_T0000648:3;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24367167	24367319	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000648;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000648;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03009_ch_T0000648:4;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24367167	24367319	.	+	2	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000648;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000648;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03009_ch_T0000648:3;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24367320	24369329	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000648;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000648;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03009_ch_T0000648:4;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24369330	24369444	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000648;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000648;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03009_ch_T0000648:5;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24369330	24369444	.	+	2	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000648;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000648;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03009_ch_T0000648:4;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24369445	24370399	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000648;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000648;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03009_ch_T0000648:5;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24370400	24370510	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000648;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000648;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03009_ch_T0000648:6;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24370400	24370510	.	+	1	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000648;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000648;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03009_ch_T0000648:5;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24370511	24370950	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000648;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000648;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03009_ch_T0000648:6;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24370951	24371061	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000648;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000648;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03009_ch_T0000648:7;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24370951	24371061	.	+	1	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000648;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000648;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03009_ch_T0000648:6;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24371062	24371495	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000648;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000648;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03009_ch_T0000648:7;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24371496	24371606	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000648;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000648;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03009_ch_T0000648:8;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24371496	24371606	.	+	1	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000648;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000648;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03009_ch_T0000648:7;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24371607	24372726	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000648;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000648;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03009_ch_T0000648:8;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24372727	24372815	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000648;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000648;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03009_ch_T0000648:9;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24372727	24372815	.	+	1	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000648;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000648;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03009_ch_T0000648:8;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24372816	24379288	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000648;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000648;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03009_ch_T0000648:9;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24379289	24379460	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000648;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000648;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03009_ch_T0000648:10;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24379289	24379299	.	+	2	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000648;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000648;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03009_ch_T0000648:9;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	24379297	24379299	.	+	0	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000648;gene_id=HG03009_ch_G0000229;Parent=HG03009_ch_T0000648;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=stop_codon:HG03009_ch_T0000648;Name=RBMY1F;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	24394863	24440633	.	+	.	source_gene_common_name=LOC101929148;source_gene=hg002_chrY_paternal_503;alternative_source_transcripts=hg002_chrY_paternal_503.1;gene_id=HG03009_ch_G0000230;gene_biotype=lncRNA;gene_name=LOC101929148;gene_sources=liftoff;ID=HG03009_ch_G0000230;Name=LOC101929148
HG03009_chrY	CAT	transcript	24394863	24440633	1000	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1;transcript_id=HG03009_ch_T0000649;gene_id=HG03009_ch_G0000230;Parent=HG03009_ch_G0000230;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=HG03009_ch_T0000649;Name=LOC101929148
HG03009_chrY	CAT	exon	24394863	24395063	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1;transcript_id=HG03009_ch_T0000649;gene_id=HG03009_ch_G0000230;Parent=HG03009_ch_T0000649;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=exon:HG03009_ch_T0000649:0;Name=LOC101929148;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24395064	24395397	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1;transcript_id=HG03009_ch_T0000649;gene_id=HG03009_ch_G0000230;Parent=HG03009_ch_T0000649;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=intron:HG03009_ch_T0000649:0;Name=LOC101929148;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24395398	24395707	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1;transcript_id=HG03009_ch_T0000649;gene_id=HG03009_ch_G0000230;Parent=HG03009_ch_T0000649;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=exon:HG03009_ch_T0000649:1;Name=LOC101929148;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24395708	24402254	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1;transcript_id=HG03009_ch_T0000649;gene_id=HG03009_ch_G0000230;Parent=HG03009_ch_T0000649;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=intron:HG03009_ch_T0000649:1;Name=LOC101929148;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24402255	24402395	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1;transcript_id=HG03009_ch_T0000649;gene_id=HG03009_ch_G0000230;Parent=HG03009_ch_T0000649;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=exon:HG03009_ch_T0000649:2;Name=LOC101929148;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24402396	24412356	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1;transcript_id=HG03009_ch_T0000649;gene_id=HG03009_ch_G0000230;Parent=HG03009_ch_T0000649;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=intron:HG03009_ch_T0000649:2;Name=LOC101929148;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24412357	24412579	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1;transcript_id=HG03009_ch_T0000649;gene_id=HG03009_ch_G0000230;Parent=HG03009_ch_T0000649;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=exon:HG03009_ch_T0000649:3;Name=LOC101929148;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24412580	24412887	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1;transcript_id=HG03009_ch_T0000649;gene_id=HG03009_ch_G0000230;Parent=HG03009_ch_T0000649;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=intron:HG03009_ch_T0000649:3;Name=LOC101929148;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24412888	24412973	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1;transcript_id=HG03009_ch_T0000649;gene_id=HG03009_ch_G0000230;Parent=HG03009_ch_T0000649;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=exon:HG03009_ch_T0000649:4;Name=LOC101929148;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24412974	24420151	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1;transcript_id=HG03009_ch_T0000649;gene_id=HG03009_ch_G0000230;Parent=HG03009_ch_T0000649;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=intron:HG03009_ch_T0000649:4;Name=LOC101929148;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24420152	24420270	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1;transcript_id=HG03009_ch_T0000649;gene_id=HG03009_ch_G0000230;Parent=HG03009_ch_T0000649;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=exon:HG03009_ch_T0000649:5;Name=LOC101929148;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24420271	24420700	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1;transcript_id=HG03009_ch_T0000649;gene_id=HG03009_ch_G0000230;Parent=HG03009_ch_T0000649;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=intron:HG03009_ch_T0000649:5;Name=LOC101929148;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24420701	24421054	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1;transcript_id=HG03009_ch_T0000649;gene_id=HG03009_ch_G0000230;Parent=HG03009_ch_T0000649;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=exon:HG03009_ch_T0000649:6;Name=LOC101929148;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24421055	24434683	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1;transcript_id=HG03009_ch_T0000649;gene_id=HG03009_ch_G0000230;Parent=HG03009_ch_T0000649;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=intron:HG03009_ch_T0000649:6;Name=LOC101929148;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24434684	24434773	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1;transcript_id=HG03009_ch_T0000649;gene_id=HG03009_ch_G0000230;Parent=HG03009_ch_T0000649;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=exon:HG03009_ch_T0000649:7;Name=LOC101929148;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24434774	24436239	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1;transcript_id=HG03009_ch_T0000649;gene_id=HG03009_ch_G0000230;Parent=HG03009_ch_T0000649;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=intron:HG03009_ch_T0000649:7;Name=LOC101929148;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24436240	24436575	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1;transcript_id=HG03009_ch_T0000649;gene_id=HG03009_ch_G0000230;Parent=HG03009_ch_T0000649;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=exon:HG03009_ch_T0000649:8;Name=LOC101929148;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24436576	24438375	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1;transcript_id=HG03009_ch_T0000649;gene_id=HG03009_ch_G0000230;Parent=HG03009_ch_T0000649;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=intron:HG03009_ch_T0000649:8;Name=LOC101929148;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24438376	24438461	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1;transcript_id=HG03009_ch_T0000649;gene_id=HG03009_ch_G0000230;Parent=HG03009_ch_T0000649;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=exon:HG03009_ch_T0000649:9;Name=LOC101929148;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24438462	24438581	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1;transcript_id=HG03009_ch_T0000649;gene_id=HG03009_ch_G0000230;Parent=HG03009_ch_T0000649;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=intron:HG03009_ch_T0000649:9;Name=LOC101929148;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24438582	24438778	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1;transcript_id=HG03009_ch_T0000649;gene_id=HG03009_ch_G0000230;Parent=HG03009_ch_T0000649;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=exon:HG03009_ch_T0000649:10;Name=LOC101929148;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24438779	24439322	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1;transcript_id=HG03009_ch_T0000649;gene_id=HG03009_ch_G0000230;Parent=HG03009_ch_T0000649;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=intron:HG03009_ch_T0000649:10;Name=LOC101929148;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24439323	24439440	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1;transcript_id=HG03009_ch_T0000649;gene_id=HG03009_ch_G0000230;Parent=HG03009_ch_T0000649;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=exon:HG03009_ch_T0000649:11;Name=LOC101929148;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24439441	24439955	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1;transcript_id=HG03009_ch_T0000649;gene_id=HG03009_ch_G0000230;Parent=HG03009_ch_T0000649;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=intron:HG03009_ch_T0000649:11;Name=LOC101929148;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24439956	24440633	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1;transcript_id=HG03009_ch_T0000649;gene_id=HG03009_ch_G0000230;Parent=HG03009_ch_T0000649;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=exon:HG03009_ch_T0000649:12;Name=LOC101929148;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	24395513	24397360	.	-	.	source_gene_common_name=TTTY6B;source_gene=hg002_chrY_paternal_488;gene_id=HG03009_ch_G0000231;gene_biotype=lncRNA;gene_name=TTTY6B;gene_sources=liftoff;ID=HG03009_ch_G0000231;Name=TTTY6B
HG03009_chrY	CAT	transcript	24395513	24397360	1000	-	.	source_transcript=hg002_chrY_paternal_488.1;source_transcript_name=hg002_chrY_paternal_488.1;source_gene=hg002_chrY_paternal_488;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_488;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_488.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_488.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;transcript_id=HG03009_ch_T0000650;gene_id=HG03009_ch_G0000231;Parent=HG03009_ch_G0000231;transcript_name=hg002_chrY_paternal_488.1;gene_name=TTTY6B;ID=HG03009_ch_T0000650;Name=TTTY6B
HG03009_chrY	CAT	exon	24395513	24395754	.	-	.	source_transcript=hg002_chrY_paternal_488.1;source_transcript_name=hg002_chrY_paternal_488.1;source_gene=hg002_chrY_paternal_488;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_488;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_488.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_488.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;transcript_id=HG03009_ch_T0000650;gene_id=HG03009_ch_G0000231;Parent=HG03009_ch_T0000650;transcript_name=hg002_chrY_paternal_488.1;gene_name=TTTY6B;ID=exon:HG03009_ch_T0000650:0;Name=TTTY6B;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24395755	24396911	.	-	.	source_transcript=hg002_chrY_paternal_488.1;source_transcript_name=hg002_chrY_paternal_488.1;source_gene=hg002_chrY_paternal_488;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_488;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_488.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_488.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;transcript_id=HG03009_ch_T0000650;gene_id=HG03009_ch_G0000231;Parent=HG03009_ch_T0000650;transcript_name=hg002_chrY_paternal_488.1;gene_name=TTTY6B;ID=intron:HG03009_ch_T0000650:0;Name=TTTY6B;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24396912	24397049	.	-	.	source_transcript=hg002_chrY_paternal_488.1;source_transcript_name=hg002_chrY_paternal_488.1;source_gene=hg002_chrY_paternal_488;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_488;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_488.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_488.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;transcript_id=HG03009_ch_T0000650;gene_id=HG03009_ch_G0000231;Parent=HG03009_ch_T0000650;transcript_name=hg002_chrY_paternal_488.1;gene_name=TTTY6B;ID=exon:HG03009_ch_T0000650:1;Name=TTTY6B;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24397050	24397267	.	-	.	source_transcript=hg002_chrY_paternal_488.1;source_transcript_name=hg002_chrY_paternal_488.1;source_gene=hg002_chrY_paternal_488;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_488;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_488.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_488.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;transcript_id=HG03009_ch_T0000650;gene_id=HG03009_ch_G0000231;Parent=HG03009_ch_T0000650;transcript_name=hg002_chrY_paternal_488.1;gene_name=TTTY6B;ID=intron:HG03009_ch_T0000650:1;Name=TTTY6B;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24397268	24397360	.	-	.	source_transcript=hg002_chrY_paternal_488.1;source_transcript_name=hg002_chrY_paternal_488.1;source_gene=hg002_chrY_paternal_488;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_488;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_488.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_488.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;transcript_id=HG03009_ch_T0000650;gene_id=HG03009_ch_G0000231;Parent=HG03009_ch_T0000650;transcript_name=hg002_chrY_paternal_488.1;gene_name=TTTY6B;ID=exon:HG03009_ch_T0000650:2;Name=TTTY6B;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	24446319	24470559	.	+	.	source_gene_common_name=PRY2;source_gene=hg002_chrY_paternal_505;alternative_source_transcripts=hg002_chrY_paternal_505.1;gene_id=HG03009_ch_G0000232;gene_biotype=protein_coding;gene_name=PRY2;gene_sources=liftoff,augTM;ID=HG03009_ch_G0000232;Name=PRY2
HG03009_chrY	CAT	transcript	24446319	24470559	100	+	.	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_505.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000651;gene_id=HG03009_ch_G0000232;Parent=HG03009_ch_G0000232;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=HG03009_ch_T0000651;Name=PRY2
HG03009_chrY	CAT	exon	24446319	24446406	.	+	.	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_505.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000651;gene_id=HG03009_ch_G0000232;Parent=HG03009_ch_T0000651;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=exon:HG03009_ch_T0000651:0;Name=PRY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24446407	24446507	.	+	.	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_505.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000651;gene_id=HG03009_ch_G0000232;Parent=HG03009_ch_T0000651;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=intron:HG03009_ch_T0000651:0;Name=PRY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24446508	24446594	.	+	.	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_505.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000651;gene_id=HG03009_ch_G0000232;Parent=HG03009_ch_T0000651;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=exon:HG03009_ch_T0000651:1;Name=PRY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24446595	24457435	.	+	.	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_505.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000651;gene_id=HG03009_ch_G0000232;Parent=HG03009_ch_T0000651;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=intron:HG03009_ch_T0000651:1;Name=PRY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24457436	24457556	.	+	.	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_505.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000651;gene_id=HG03009_ch_G0000232;Parent=HG03009_ch_T0000651;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=exon:HG03009_ch_T0000651:2;Name=PRY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24457488	24457556	.	+	0	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_505.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000651;gene_id=HG03009_ch_G0000232;Parent=HG03009_ch_T0000651;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=CDS:HG03009_ch_T0000651:0;Name=PRY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	24457488	24457490	.	+	0	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_505.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000651;gene_id=HG03009_ch_G0000232;Parent=HG03009_ch_T0000651;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=start_codon:HG03009_ch_T0000651;Name=PRY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24457557	24460131	.	+	.	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_505.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000651;gene_id=HG03009_ch_G0000232;Parent=HG03009_ch_T0000651;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=intron:HG03009_ch_T0000651:2;Name=PRY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24460132	24460247	.	+	.	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_505.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000651;gene_id=HG03009_ch_G0000232;Parent=HG03009_ch_T0000651;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=exon:HG03009_ch_T0000651:3;Name=PRY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24460132	24460247	.	+	0	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_505.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000651;gene_id=HG03009_ch_G0000232;Parent=HG03009_ch_T0000651;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=CDS:HG03009_ch_T0000651:1;Name=PRY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24460248	24469733	.	+	.	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_505.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000651;gene_id=HG03009_ch_G0000232;Parent=HG03009_ch_T0000651;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=intron:HG03009_ch_T0000651:3;Name=PRY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24469734	24470559	.	+	.	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_505.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000651;gene_id=HG03009_ch_G0000232;Parent=HG03009_ch_T0000651;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=exon:HG03009_ch_T0000651:4;Name=PRY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24469734	24469992	.	+	1	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_505.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000651;gene_id=HG03009_ch_G0000232;Parent=HG03009_ch_T0000651;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=CDS:HG03009_ch_T0000651:2;Name=PRY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	24469990	24469992	.	+	0	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_505.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000651;gene_id=HG03009_ch_G0000232;Parent=HG03009_ch_T0000651;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=stop_codon:HG03009_ch_T0000651;Name=PRY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	24511969	24513996	.	-	.	source_gene_common_name=LOC107987356;source_gene=hg002_chrY_paternal_481;gene_id=HG03009_ch_G0000233;gene_biotype=lncRNA;gene_name=LOC107987356;gene_sources=liftoff;ID=HG03009_ch_G0000233;Name=LOC107987356
HG03009_chrY	CAT	transcript	24511969	24513996	1000	-	.	source_transcript=hg002_chrY_paternal_481.1;source_transcript_name=hg002_chrY_paternal_481.1;source_gene=hg002_chrY_paternal_481;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_481;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_481.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_481.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987356;transcript_id=HG03009_ch_T0000652;gene_id=HG03009_ch_G0000233;Parent=HG03009_ch_G0000233;transcript_name=hg002_chrY_paternal_481.1;gene_name=LOC107987356;ID=HG03009_ch_T0000652;Name=LOC107987356
HG03009_chrY	CAT	exon	24511969	24512170	.	-	.	source_transcript=hg002_chrY_paternal_481.1;source_transcript_name=hg002_chrY_paternal_481.1;source_gene=hg002_chrY_paternal_481;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_481;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_481.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_481.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987356;transcript_id=HG03009_ch_T0000652;gene_id=HG03009_ch_G0000233;Parent=HG03009_ch_T0000652;transcript_name=hg002_chrY_paternal_481.1;gene_name=LOC107987356;ID=exon:HG03009_ch_T0000652:0;Name=LOC107987356;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24512171	24513705	.	-	.	source_transcript=hg002_chrY_paternal_481.1;source_transcript_name=hg002_chrY_paternal_481.1;source_gene=hg002_chrY_paternal_481;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_481;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_481.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_481.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987356;transcript_id=HG03009_ch_T0000652;gene_id=HG03009_ch_G0000233;Parent=HG03009_ch_T0000652;transcript_name=hg002_chrY_paternal_481.1;gene_name=LOC107987356;ID=intron:HG03009_ch_T0000652:0;Name=LOC107987356;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24513706	24513766	.	-	.	source_transcript=hg002_chrY_paternal_481.1;source_transcript_name=hg002_chrY_paternal_481.1;source_gene=hg002_chrY_paternal_481;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_481;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_481.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_481.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987356;transcript_id=HG03009_ch_T0000652;gene_id=HG03009_ch_G0000233;Parent=HG03009_ch_T0000652;transcript_name=hg002_chrY_paternal_481.1;gene_name=LOC107987356;ID=exon:HG03009_ch_T0000652:1;Name=LOC107987356;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24513767	24513883	.	-	.	source_transcript=hg002_chrY_paternal_481.1;source_transcript_name=hg002_chrY_paternal_481.1;source_gene=hg002_chrY_paternal_481;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_481;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_481.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_481.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987356;transcript_id=HG03009_ch_T0000652;gene_id=HG03009_ch_G0000233;Parent=HG03009_ch_T0000652;transcript_name=hg002_chrY_paternal_481.1;gene_name=LOC107987356;ID=intron:HG03009_ch_T0000652:1;Name=LOC107987356;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24513884	24513996	.	-	.	source_transcript=hg002_chrY_paternal_481.1;source_transcript_name=hg002_chrY_paternal_481.1;source_gene=hg002_chrY_paternal_481;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_481;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_481.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_481.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987356;transcript_id=HG03009_ch_T0000652;gene_id=HG03009_ch_G0000233;Parent=HG03009_ch_T0000652;transcript_name=hg002_chrY_paternal_481.1;gene_name=LOC107987356;ID=exon:HG03009_ch_T0000652:2;Name=LOC107987356;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	24742157	24753395	.	+	.	source_gene_common_name=LOC107987348;source_gene=hg002_chrY_paternal_515;alternative_source_transcripts=hg002_chrY_paternal_515.1,hg002_chrY_paternal_515.1;gene_id=HG03009_ch_G0000234;gene_biotype=lncRNA;gene_name=LOC107987348;gene_sources=liftoff;ID=HG03009_ch_G0000234;Name=LOC107987348
HG03009_chrY	CAT	transcript	24742157	24753395	1000	+	.	source_transcript=hg002_chrY_paternal_515.1;source_transcript_name=hg002_chrY_paternal_515.1;source_gene=hg002_chrY_paternal_515;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_515;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_515.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_515.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987348;alternative_source_transcripts=hg002_chrY_paternal_515.1,hg002_chrY_paternal_515.1;transcript_id=HG03009_ch_T0000653;gene_id=HG03009_ch_G0000234;Parent=HG03009_ch_G0000234;transcript_name=hg002_chrY_paternal_515.1;gene_name=LOC107987348;ID=HG03009_ch_T0000653;Name=LOC107987348
HG03009_chrY	CAT	exon	24742157	24742612	.	+	.	source_transcript=hg002_chrY_paternal_515.1;source_transcript_name=hg002_chrY_paternal_515.1;source_gene=hg002_chrY_paternal_515;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_515;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_515.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_515.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987348;alternative_source_transcripts=hg002_chrY_paternal_515.1,hg002_chrY_paternal_515.1;transcript_id=HG03009_ch_T0000653;gene_id=HG03009_ch_G0000234;Parent=HG03009_ch_T0000653;transcript_name=hg002_chrY_paternal_515.1;gene_name=LOC107987348;ID=exon:HG03009_ch_T0000653:0;Name=LOC107987348;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24742613	24748582	.	+	.	source_transcript=hg002_chrY_paternal_515.1;source_transcript_name=hg002_chrY_paternal_515.1;source_gene=hg002_chrY_paternal_515;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_515;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_515.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_515.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987348;alternative_source_transcripts=hg002_chrY_paternal_515.1,hg002_chrY_paternal_515.1;transcript_id=HG03009_ch_T0000653;gene_id=HG03009_ch_G0000234;Parent=HG03009_ch_T0000653;transcript_name=hg002_chrY_paternal_515.1;gene_name=LOC107987348;ID=intron:HG03009_ch_T0000653:0;Name=LOC107987348;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24748583	24750747	.	+	.	source_transcript=hg002_chrY_paternal_515.1;source_transcript_name=hg002_chrY_paternal_515.1;source_gene=hg002_chrY_paternal_515;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_515;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_515.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_515.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987348;alternative_source_transcripts=hg002_chrY_paternal_515.1,hg002_chrY_paternal_515.1;transcript_id=HG03009_ch_T0000653;gene_id=HG03009_ch_G0000234;Parent=HG03009_ch_T0000653;transcript_name=hg002_chrY_paternal_515.1;gene_name=LOC107987348;ID=exon:HG03009_ch_T0000653:1;Name=LOC107987348;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24750748	24751388	.	+	.	source_transcript=hg002_chrY_paternal_515.1;source_transcript_name=hg002_chrY_paternal_515.1;source_gene=hg002_chrY_paternal_515;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_515;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_515.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_515.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987348;alternative_source_transcripts=hg002_chrY_paternal_515.1,hg002_chrY_paternal_515.1;transcript_id=HG03009_ch_T0000653;gene_id=HG03009_ch_G0000234;Parent=HG03009_ch_T0000653;transcript_name=hg002_chrY_paternal_515.1;gene_name=LOC107987348;ID=intron:HG03009_ch_T0000653:1;Name=LOC107987348;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24751389	24753395	.	+	.	source_transcript=hg002_chrY_paternal_515.1;source_transcript_name=hg002_chrY_paternal_515.1;source_gene=hg002_chrY_paternal_515;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_515;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_515.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_515.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987348;alternative_source_transcripts=hg002_chrY_paternal_515.1,hg002_chrY_paternal_515.1;transcript_id=HG03009_ch_T0000653;gene_id=HG03009_ch_G0000234;Parent=HG03009_ch_T0000653;transcript_name=hg002_chrY_paternal_515.1;gene_name=LOC107987348;ID=exon:HG03009_ch_T0000653:2;Name=LOC107987348;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	24742157	24753395	1000	+	.	source_transcript=hg002_chrY_paternal_515.2;source_transcript_name=hg002_chrY_paternal_515.1;source_gene=hg002_chrY_paternal_515;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_515;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_515.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_515.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987348;alternative_source_transcripts=hg002_chrY_paternal_515.2,hg002_chrY_paternal_515.2;transcript_id=HG03009_ch_T0000654;gene_id=HG03009_ch_G0000234;Parent=HG03009_ch_G0000234;transcript_name=hg002_chrY_paternal_515.1;gene_name=LOC107987348;ID=HG03009_ch_T0000654;Name=LOC107987348
HG03009_chrY	CAT	exon	24742157	24742612	.	+	.	source_transcript=hg002_chrY_paternal_515.2;source_transcript_name=hg002_chrY_paternal_515.1;source_gene=hg002_chrY_paternal_515;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_515;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_515.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_515.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987348;alternative_source_transcripts=hg002_chrY_paternal_515.2,hg002_chrY_paternal_515.2;transcript_id=HG03009_ch_T0000654;gene_id=HG03009_ch_G0000234;Parent=HG03009_ch_T0000654;transcript_name=hg002_chrY_paternal_515.1;gene_name=LOC107987348;ID=exon:HG03009_ch_T0000654:0;Name=LOC107987348;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24742613	24748114	.	+	.	source_transcript=hg002_chrY_paternal_515.2;source_transcript_name=hg002_chrY_paternal_515.1;source_gene=hg002_chrY_paternal_515;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_515;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_515.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_515.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987348;alternative_source_transcripts=hg002_chrY_paternal_515.2,hg002_chrY_paternal_515.2;transcript_id=HG03009_ch_T0000654;gene_id=HG03009_ch_G0000234;Parent=HG03009_ch_T0000654;transcript_name=hg002_chrY_paternal_515.1;gene_name=LOC107987348;ID=intron:HG03009_ch_T0000654:0;Name=LOC107987348;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24748115	24750747	.	+	.	source_transcript=hg002_chrY_paternal_515.2;source_transcript_name=hg002_chrY_paternal_515.1;source_gene=hg002_chrY_paternal_515;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_515;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_515.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_515.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987348;alternative_source_transcripts=hg002_chrY_paternal_515.2,hg002_chrY_paternal_515.2;transcript_id=HG03009_ch_T0000654;gene_id=HG03009_ch_G0000234;Parent=HG03009_ch_T0000654;transcript_name=hg002_chrY_paternal_515.1;gene_name=LOC107987348;ID=exon:HG03009_ch_T0000654:1;Name=LOC107987348;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24750748	24751388	.	+	.	source_transcript=hg002_chrY_paternal_515.2;source_transcript_name=hg002_chrY_paternal_515.1;source_gene=hg002_chrY_paternal_515;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_515;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_515.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_515.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987348;alternative_source_transcripts=hg002_chrY_paternal_515.2,hg002_chrY_paternal_515.2;transcript_id=HG03009_ch_T0000654;gene_id=HG03009_ch_G0000234;Parent=HG03009_ch_T0000654;transcript_name=hg002_chrY_paternal_515.1;gene_name=LOC107987348;ID=intron:HG03009_ch_T0000654:1;Name=LOC107987348;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24751389	24753395	.	+	.	source_transcript=hg002_chrY_paternal_515.2;source_transcript_name=hg002_chrY_paternal_515.1;source_gene=hg002_chrY_paternal_515;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_515;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_515.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_515.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987348;alternative_source_transcripts=hg002_chrY_paternal_515.2,hg002_chrY_paternal_515.2;transcript_id=HG03009_ch_T0000654;gene_id=HG03009_ch_G0000234;Parent=HG03009_ch_T0000654;transcript_name=hg002_chrY_paternal_515.1;gene_name=LOC107987348;ID=exon:HG03009_ch_T0000654:2;Name=LOC107987348;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	24807528	24808660	.	+	.	source_gene_common_name=TTTY17A;source_gene=hg002_chrY_paternal_516;alternative_source_transcripts=hg002_chrY_paternal_516.1,hg002_chrY_paternal_516.1;gene_id=HG03009_ch_G0000235;gene_biotype=lncRNA;gene_name=TTTY17A;gene_sources=liftoff;ID=HG03009_ch_G0000235;Name=TTTY17A
HG03009_chrY	CAT	transcript	24807528	24808660	1000	+	.	source_transcript=hg002_chrY_paternal_516.1;source_transcript_name=hg002_chrY_paternal_516.1;source_gene=hg002_chrY_paternal_516;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_516;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_516.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_516.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17A;alternative_source_transcripts=hg002_chrY_paternal_516.1,hg002_chrY_paternal_516.1;transcript_id=HG03009_ch_T0000655;gene_id=HG03009_ch_G0000235;Parent=HG03009_ch_G0000235;transcript_name=hg002_chrY_paternal_516.1;gene_name=TTTY17A;ID=HG03009_ch_T0000655;Name=TTTY17A
HG03009_chrY	CAT	exon	24807528	24807587	.	+	.	source_transcript=hg002_chrY_paternal_516.1;source_transcript_name=hg002_chrY_paternal_516.1;source_gene=hg002_chrY_paternal_516;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_516;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_516.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_516.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17A;alternative_source_transcripts=hg002_chrY_paternal_516.1,hg002_chrY_paternal_516.1;transcript_id=HG03009_ch_T0000655;gene_id=HG03009_ch_G0000235;Parent=HG03009_ch_T0000655;transcript_name=hg002_chrY_paternal_516.1;gene_name=TTTY17A;ID=exon:HG03009_ch_T0000655:0;Name=TTTY17A;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24807588	24808554	.	+	.	source_transcript=hg002_chrY_paternal_516.1;source_transcript_name=hg002_chrY_paternal_516.1;source_gene=hg002_chrY_paternal_516;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_516;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_516.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_516.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17A;alternative_source_transcripts=hg002_chrY_paternal_516.1,hg002_chrY_paternal_516.1;transcript_id=HG03009_ch_T0000655;gene_id=HG03009_ch_G0000235;Parent=HG03009_ch_T0000655;transcript_name=hg002_chrY_paternal_516.1;gene_name=TTTY17A;ID=intron:HG03009_ch_T0000655:0;Name=TTTY17A;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24808555	24808660	.	+	.	source_transcript=hg002_chrY_paternal_516.1;source_transcript_name=hg002_chrY_paternal_516.1;source_gene=hg002_chrY_paternal_516;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_516;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_516.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_516.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17A;alternative_source_transcripts=hg002_chrY_paternal_516.1,hg002_chrY_paternal_516.1;transcript_id=HG03009_ch_T0000655;gene_id=HG03009_ch_G0000235;Parent=HG03009_ch_T0000655;transcript_name=hg002_chrY_paternal_516.1;gene_name=TTTY17A;ID=exon:HG03009_ch_T0000655:1;Name=TTTY17A;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	24892401	24929218	.	+	.	source_gene_common_name=TTTY4C;source_gene=hg002_chrY_paternal_519;alternative_source_transcripts=hg002_chrY_paternal_519.1;gene_id=HG03009_ch_G0000236;gene_biotype=lncRNA;gene_name=TTTY4C;gene_sources=liftoff;ID=HG03009_ch_G0000236;Name=TTTY4C
HG03009_chrY	CAT	transcript	24892401	24929218	1000	+	.	source_transcript=hg002_chrY_paternal_519.1;source_transcript_name=hg002_chrY_paternal_519.1;source_gene=hg002_chrY_paternal_519;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_519;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_519.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_519.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4C;alternative_source_transcripts=hg002_chrY_paternal_519.1;transcript_id=HG03009_ch_T0000656;gene_id=HG03009_ch_G0000236;Parent=HG03009_ch_G0000236;transcript_name=hg002_chrY_paternal_519.1;gene_name=TTTY4C;ID=HG03009_ch_T0000656;Name=TTTY4C
HG03009_chrY	CAT	exon	24892401	24892561	.	+	.	source_transcript=hg002_chrY_paternal_519.1;source_transcript_name=hg002_chrY_paternal_519.1;source_gene=hg002_chrY_paternal_519;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_519;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_519.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_519.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4C;alternative_source_transcripts=hg002_chrY_paternal_519.1;transcript_id=HG03009_ch_T0000656;gene_id=HG03009_ch_G0000236;Parent=HG03009_ch_T0000656;transcript_name=hg002_chrY_paternal_519.1;gene_name=TTTY4C;ID=exon:HG03009_ch_T0000656:0;Name=TTTY4C;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24892562	24919561	.	+	.	source_transcript=hg002_chrY_paternal_519.1;source_transcript_name=hg002_chrY_paternal_519.1;source_gene=hg002_chrY_paternal_519;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_519;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_519.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_519.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4C;alternative_source_transcripts=hg002_chrY_paternal_519.1;transcript_id=HG03009_ch_T0000656;gene_id=HG03009_ch_G0000236;Parent=HG03009_ch_T0000656;transcript_name=hg002_chrY_paternal_519.1;gene_name=TTTY4C;ID=intron:HG03009_ch_T0000656:0;Name=TTTY4C;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24919562	24919637	.	+	.	source_transcript=hg002_chrY_paternal_519.1;source_transcript_name=hg002_chrY_paternal_519.1;source_gene=hg002_chrY_paternal_519;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_519;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_519.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_519.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4C;alternative_source_transcripts=hg002_chrY_paternal_519.1;transcript_id=HG03009_ch_T0000656;gene_id=HG03009_ch_G0000236;Parent=HG03009_ch_T0000656;transcript_name=hg002_chrY_paternal_519.1;gene_name=TTTY4C;ID=exon:HG03009_ch_T0000656:1;Name=TTTY4C;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24919638	24921441	.	+	.	source_transcript=hg002_chrY_paternal_519.1;source_transcript_name=hg002_chrY_paternal_519.1;source_gene=hg002_chrY_paternal_519;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_519;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_519.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_519.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4C;alternative_source_transcripts=hg002_chrY_paternal_519.1;transcript_id=HG03009_ch_T0000656;gene_id=HG03009_ch_G0000236;Parent=HG03009_ch_T0000656;transcript_name=hg002_chrY_paternal_519.1;gene_name=TTTY4C;ID=intron:HG03009_ch_T0000656:1;Name=TTTY4C;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24921442	24921549	.	+	.	source_transcript=hg002_chrY_paternal_519.1;source_transcript_name=hg002_chrY_paternal_519.1;source_gene=hg002_chrY_paternal_519;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_519;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_519.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_519.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4C;alternative_source_transcripts=hg002_chrY_paternal_519.1;transcript_id=HG03009_ch_T0000656;gene_id=HG03009_ch_G0000236;Parent=HG03009_ch_T0000656;transcript_name=hg002_chrY_paternal_519.1;gene_name=TTTY4C;ID=exon:HG03009_ch_T0000656:2;Name=TTTY4C;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24921550	24928217	.	+	.	source_transcript=hg002_chrY_paternal_519.1;source_transcript_name=hg002_chrY_paternal_519.1;source_gene=hg002_chrY_paternal_519;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_519;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_519.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_519.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4C;alternative_source_transcripts=hg002_chrY_paternal_519.1;transcript_id=HG03009_ch_T0000656;gene_id=HG03009_ch_G0000236;Parent=HG03009_ch_T0000656;transcript_name=hg002_chrY_paternal_519.1;gene_name=TTTY4C;ID=intron:HG03009_ch_T0000656:2;Name=TTTY4C;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24928218	24929218	.	+	.	source_transcript=hg002_chrY_paternal_519.1;source_transcript_name=hg002_chrY_paternal_519.1;source_gene=hg002_chrY_paternal_519;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_519;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_519.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_519.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4C;alternative_source_transcripts=hg002_chrY_paternal_519.1;transcript_id=HG03009_ch_T0000656;gene_id=HG03009_ch_G0000236;Parent=HG03009_ch_T0000656;transcript_name=hg002_chrY_paternal_519.1;gene_name=TTTY4C;ID=exon:HG03009_ch_T0000656:3;Name=TTTY4C;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	24940197	24961400	.	+	.	source_gene_common_name=BPY2B;source_gene=hg002_chrY_paternal_533;alternative_source_transcripts=hg002_chrY_paternal_520.1;gene_id=HG03009_ch_G0000237;gene_biotype=protein_coding;gene_name=BPY2B;gene_sources=liftoff;ID=HG03009_ch_G0000237;Name=BPY2B
HG03009_chrY	CAT	transcript	24940197	24961400	100	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=HG03009_ch_T0000657;gene_id=HG03009_ch_G0000237;Parent=HG03009_ch_G0000237;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=HG03009_ch_T0000657;Name=BPY2B
HG03009_chrY	CAT	exon	24940197	24940227	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=HG03009_ch_T0000657;gene_id=HG03009_ch_G0000237;Parent=HG03009_ch_T0000657;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=exon:HG03009_ch_T0000657:0;Name=BPY2B;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24940228	24940502	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=HG03009_ch_T0000657;gene_id=HG03009_ch_G0000237;Parent=HG03009_ch_T0000657;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=intron:HG03009_ch_T0000657:0;Name=BPY2B;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24940503	24940625	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=HG03009_ch_T0000657;gene_id=HG03009_ch_G0000237;Parent=HG03009_ch_T0000657;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=exon:HG03009_ch_T0000657:1;Name=BPY2B;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24940626	24943690	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=HG03009_ch_T0000657;gene_id=HG03009_ch_G0000237;Parent=HG03009_ch_T0000657;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=intron:HG03009_ch_T0000657:1;Name=BPY2B;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24943691	24943827	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=HG03009_ch_T0000657;gene_id=HG03009_ch_G0000237;Parent=HG03009_ch_T0000657;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=exon:HG03009_ch_T0000657:2;Name=BPY2B;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24943828	24948236	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=HG03009_ch_T0000657;gene_id=HG03009_ch_G0000237;Parent=HG03009_ch_T0000657;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=intron:HG03009_ch_T0000657:2;Name=BPY2B;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24948237	24948355	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=HG03009_ch_T0000657;gene_id=HG03009_ch_G0000237;Parent=HG03009_ch_T0000657;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=exon:HG03009_ch_T0000657:3;Name=BPY2B;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24948278	24948355	.	+	0	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=HG03009_ch_T0000657;gene_id=HG03009_ch_G0000237;Parent=HG03009_ch_T0000657;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=CDS:HG03009_ch_T0000657:0;Name=BPY2B;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	24948278	24948280	.	+	0	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=HG03009_ch_T0000657;gene_id=HG03009_ch_G0000237;Parent=HG03009_ch_T0000657;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=start_codon:HG03009_ch_T0000657;Name=BPY2B;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24948356	24950414	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=HG03009_ch_T0000657;gene_id=HG03009_ch_G0000237;Parent=HG03009_ch_T0000657;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=intron:HG03009_ch_T0000657:3;Name=BPY2B;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24950415	24950532	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=HG03009_ch_T0000657;gene_id=HG03009_ch_G0000237;Parent=HG03009_ch_T0000657;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=exon:HG03009_ch_T0000657:4;Name=BPY2B;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24950415	24950532	.	+	0	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=HG03009_ch_T0000657;gene_id=HG03009_ch_G0000237;Parent=HG03009_ch_T0000657;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=CDS:HG03009_ch_T0000657:1;Name=BPY2B;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24950533	24953386	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=HG03009_ch_T0000657;gene_id=HG03009_ch_G0000237;Parent=HG03009_ch_T0000657;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=intron:HG03009_ch_T0000657:4;Name=BPY2B;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24953387	24953492	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=HG03009_ch_T0000657;gene_id=HG03009_ch_G0000237;Parent=HG03009_ch_T0000657;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=exon:HG03009_ch_T0000657:5;Name=BPY2B;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24953387	24953492	.	+	2	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=HG03009_ch_T0000657;gene_id=HG03009_ch_G0000237;Parent=HG03009_ch_T0000657;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=CDS:HG03009_ch_T0000657:2;Name=BPY2B;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24953493	24954184	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=HG03009_ch_T0000657;gene_id=HG03009_ch_G0000237;Parent=HG03009_ch_T0000657;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=intron:HG03009_ch_T0000657:5;Name=BPY2B;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24954185	24954309	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=HG03009_ch_T0000657;gene_id=HG03009_ch_G0000237;Parent=HG03009_ch_T0000657;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=exon:HG03009_ch_T0000657:6;Name=BPY2B;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	24954185	24954203	.	+	1	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=HG03009_ch_T0000657;gene_id=HG03009_ch_G0000237;Parent=HG03009_ch_T0000657;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=CDS:HG03009_ch_T0000657:3;Name=BPY2B;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	24954201	24954203	.	+	0	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=HG03009_ch_T0000657;gene_id=HG03009_ch_G0000237;Parent=HG03009_ch_T0000657;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=stop_codon:HG03009_ch_T0000657;Name=BPY2B;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24954310	24960859	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=HG03009_ch_T0000657;gene_id=HG03009_ch_G0000237;Parent=HG03009_ch_T0000657;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=intron:HG03009_ch_T0000657:6;Name=BPY2B;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24960860	24960984	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=HG03009_ch_T0000657;gene_id=HG03009_ch_G0000237;Parent=HG03009_ch_T0000657;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=exon:HG03009_ch_T0000657:7;Name=BPY2B;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	24960985	24961078	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=HG03009_ch_T0000657;gene_id=HG03009_ch_G0000237;Parent=HG03009_ch_T0000657;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=intron:HG03009_ch_T0000657:7;Name=BPY2B;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	24961079	24961400	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=HG03009_ch_T0000657;gene_id=HG03009_ch_G0000237;Parent=HG03009_ch_T0000657;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=exon:HG03009_ch_T0000657:8;Name=BPY2B;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	25062299	25065640	.	-	.	source_gene_common_name=LOC105377238;source_gene=hg002_chrY_paternal_599;gene_id=HG03009_ch_G0000238;gene_biotype=lncRNA;gene_name=LOC105377238;gene_sources=liftoff;ID=HG03009_ch_G0000238;Name=LOC105377238
HG03009_chrY	CAT	transcript	25062299	25065640	1000	-	.	source_transcript=hg002_chrY_paternal_599.2;source_transcript_name=hg002_chrY_paternal_599.1;source_gene=hg002_chrY_paternal_599;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_599;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_599.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_599.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377238;transcript_id=HG03009_ch_T0000658;gene_id=HG03009_ch_G0000238;Parent=HG03009_ch_G0000238;transcript_name=hg002_chrY_paternal_599.1;gene_name=LOC105377238;ID=HG03009_ch_T0000658;Name=LOC105377238
HG03009_chrY	CAT	exon	25062299	25062399	.	-	.	source_transcript=hg002_chrY_paternal_599.2;source_transcript_name=hg002_chrY_paternal_599.1;source_gene=hg002_chrY_paternal_599;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_599;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_599.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_599.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377238;transcript_id=HG03009_ch_T0000658;gene_id=HG03009_ch_G0000238;Parent=HG03009_ch_T0000658;transcript_name=hg002_chrY_paternal_599.1;gene_name=LOC105377238;ID=exon:HG03009_ch_T0000658:0;Name=LOC105377238;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25062400	25064757	.	-	.	source_transcript=hg002_chrY_paternal_599.2;source_transcript_name=hg002_chrY_paternal_599.1;source_gene=hg002_chrY_paternal_599;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_599;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_599.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_599.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377238;transcript_id=HG03009_ch_T0000658;gene_id=HG03009_ch_G0000238;Parent=HG03009_ch_T0000658;transcript_name=hg002_chrY_paternal_599.1;gene_name=LOC105377238;ID=intron:HG03009_ch_T0000658:0;Name=LOC105377238;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25064758	25064795	.	-	.	source_transcript=hg002_chrY_paternal_599.2;source_transcript_name=hg002_chrY_paternal_599.1;source_gene=hg002_chrY_paternal_599;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_599;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_599.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_599.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377238;transcript_id=HG03009_ch_T0000658;gene_id=HG03009_ch_G0000238;Parent=HG03009_ch_T0000658;transcript_name=hg002_chrY_paternal_599.1;gene_name=LOC105377238;ID=exon:HG03009_ch_T0000658:1;Name=LOC105377238;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25064796	25065457	.	-	.	source_transcript=hg002_chrY_paternal_599.2;source_transcript_name=hg002_chrY_paternal_599.1;source_gene=hg002_chrY_paternal_599;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_599;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_599.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_599.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377238;transcript_id=HG03009_ch_T0000658;gene_id=HG03009_ch_G0000238;Parent=HG03009_ch_T0000658;transcript_name=hg002_chrY_paternal_599.1;gene_name=LOC105377238;ID=intron:HG03009_ch_T0000658:1;Name=LOC105377238;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25065458	25065640	.	-	.	source_transcript=hg002_chrY_paternal_599.2;source_transcript_name=hg002_chrY_paternal_599.1;source_gene=hg002_chrY_paternal_599;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_599;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_599.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_599.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377238;transcript_id=HG03009_ch_T0000658;gene_id=HG03009_ch_G0000238;Parent=HG03009_ch_T0000658;transcript_name=hg002_chrY_paternal_599.1;gene_name=LOC105377238;ID=exon:HG03009_ch_T0000658:2;Name=LOC105377238;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	25062299	25065640	1000	-	.	source_transcript=hg002_chrY_paternal_599.1;source_transcript_name=hg002_chrY_paternal_599.1;source_gene=hg002_chrY_paternal_599;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_599;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_599.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_599.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377238;transcript_id=HG03009_ch_T0000659;gene_id=HG03009_ch_G0000238;Parent=HG03009_ch_G0000238;transcript_name=hg002_chrY_paternal_599.1;gene_name=LOC105377238;ID=HG03009_ch_T0000659;Name=LOC105377238
HG03009_chrY	CAT	exon	25062299	25062399	.	-	.	source_transcript=hg002_chrY_paternal_599.1;source_transcript_name=hg002_chrY_paternal_599.1;source_gene=hg002_chrY_paternal_599;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_599;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_599.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_599.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377238;transcript_id=HG03009_ch_T0000659;gene_id=HG03009_ch_G0000238;Parent=HG03009_ch_T0000659;transcript_name=hg002_chrY_paternal_599.1;gene_name=LOC105377238;ID=exon:HG03009_ch_T0000659:0;Name=LOC105377238;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25062400	25064730	.	-	.	source_transcript=hg002_chrY_paternal_599.1;source_transcript_name=hg002_chrY_paternal_599.1;source_gene=hg002_chrY_paternal_599;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_599;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_599.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_599.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377238;transcript_id=HG03009_ch_T0000659;gene_id=HG03009_ch_G0000238;Parent=HG03009_ch_T0000659;transcript_name=hg002_chrY_paternal_599.1;gene_name=LOC105377238;ID=intron:HG03009_ch_T0000659:0;Name=LOC105377238;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25064731	25064795	.	-	.	source_transcript=hg002_chrY_paternal_599.1;source_transcript_name=hg002_chrY_paternal_599.1;source_gene=hg002_chrY_paternal_599;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_599;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_599.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_599.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377238;transcript_id=HG03009_ch_T0000659;gene_id=HG03009_ch_G0000238;Parent=HG03009_ch_T0000659;transcript_name=hg002_chrY_paternal_599.1;gene_name=LOC105377238;ID=exon:HG03009_ch_T0000659:1;Name=LOC105377238;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25064796	25065457	.	-	.	source_transcript=hg002_chrY_paternal_599.1;source_transcript_name=hg002_chrY_paternal_599.1;source_gene=hg002_chrY_paternal_599;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_599;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_599.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_599.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377238;transcript_id=HG03009_ch_T0000659;gene_id=HG03009_ch_G0000238;Parent=HG03009_ch_T0000659;transcript_name=hg002_chrY_paternal_599.1;gene_name=LOC105377238;ID=intron:HG03009_ch_T0000659:1;Name=LOC105377238;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25065458	25065640	.	-	.	source_transcript=hg002_chrY_paternal_599.1;source_transcript_name=hg002_chrY_paternal_599.1;source_gene=hg002_chrY_paternal_599;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_599;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_599.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_599.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377238;transcript_id=HG03009_ch_T0000659;gene_id=HG03009_ch_G0000238;Parent=HG03009_ch_T0000659;transcript_name=hg002_chrY_paternal_599.1;gene_name=LOC105377238;ID=exon:HG03009_ch_T0000659:2;Name=LOC105377238;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	25085257	25154912	.	-	.	source_gene_common_name=DAZ3;source_gene=hg002_chrY_paternal_526;alternative_source_transcripts=hg002_chrY_paternal_526.1;gene_id=HG03009_ch_G0000239;gene_biotype=protein_coding;gene_name=DAZ3;gene_sources=augTM,transMap;ID=HG03009_ch_G0000239;Name=DAZ3
HG03009_chrY	CAT	transcript	25085257	25154912	9950	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000660;gene_id=HG03009_ch_G0000239;Parent=HG03009_ch_G0000239;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=HG03009_ch_T0000660;Name=DAZ3
HG03009_chrY	CAT	exon	25085257	25087113	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000660;gene_id=HG03009_ch_G0000239;Parent=HG03009_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG03009_ch_T0000660:0;Name=DAZ3;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25087114	25091076	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000660;gene_id=HG03009_ch_G0000239;Parent=HG03009_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG03009_ch_T0000660:0;Name=DAZ3;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25091077	25091175	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000660;gene_id=HG03009_ch_G0000239;Parent=HG03009_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG03009_ch_T0000660:1;Name=DAZ3;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25091112	25091175	.	-	1	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000660;gene_id=HG03009_ch_G0000239;Parent=HG03009_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG03009_ch_T0000660:0;Name=DAZ3;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	25091112	25091114	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000660;gene_id=HG03009_ch_G0000239;Parent=HG03009_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=stop_codon:HG03009_ch_T0000660;Name=DAZ3;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25091176	25095748	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000660;gene_id=HG03009_ch_G0000239;Parent=HG03009_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG03009_ch_T0000660:1;Name=DAZ3;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25095749	25095783	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000660;gene_id=HG03009_ch_G0000239;Parent=HG03009_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG03009_ch_T0000660:2;Name=DAZ3;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25095749	25095783	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000660;gene_id=HG03009_ch_G0000239;Parent=HG03009_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG03009_ch_T0000660:1;Name=DAZ3;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25095784	25096527	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000660;gene_id=HG03009_ch_G0000239;Parent=HG03009_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG03009_ch_T0000660:2;Name=DAZ3;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25096528	25096599	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000660;gene_id=HG03009_ch_G0000239;Parent=HG03009_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG03009_ch_T0000660:3;Name=DAZ3;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25096528	25096599	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000660;gene_id=HG03009_ch_G0000239;Parent=HG03009_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG03009_ch_T0000660:2;Name=DAZ3;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25096600	25108698	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000660;gene_id=HG03009_ch_G0000239;Parent=HG03009_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG03009_ch_T0000660:3;Name=DAZ3;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25108699	25108770	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000660;gene_id=HG03009_ch_G0000239;Parent=HG03009_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG03009_ch_T0000660:4;Name=DAZ3;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25108699	25108770	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000660;gene_id=HG03009_ch_G0000239;Parent=HG03009_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG03009_ch_T0000660:3;Name=DAZ3;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25108771	25111075	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000660;gene_id=HG03009_ch_G0000239;Parent=HG03009_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG03009_ch_T0000660:4;Name=DAZ3;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25111076	25111147	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000660;gene_id=HG03009_ch_G0000239;Parent=HG03009_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG03009_ch_T0000660:5;Name=DAZ3;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25111076	25111147	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000660;gene_id=HG03009_ch_G0000239;Parent=HG03009_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG03009_ch_T0000660:4;Name=DAZ3;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25111148	25113471	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000660;gene_id=HG03009_ch_G0000239;Parent=HG03009_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG03009_ch_T0000660:5;Name=DAZ3;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25113472	25113543	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000660;gene_id=HG03009_ch_G0000239;Parent=HG03009_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG03009_ch_T0000660:6;Name=DAZ3;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25113472	25113543	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000660;gene_id=HG03009_ch_G0000239;Parent=HG03009_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG03009_ch_T0000660:5;Name=DAZ3;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25113544	25115854	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000660;gene_id=HG03009_ch_G0000239;Parent=HG03009_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG03009_ch_T0000660:6;Name=DAZ3;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25115855	25115926	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000660;gene_id=HG03009_ch_G0000239;Parent=HG03009_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG03009_ch_T0000660:7;Name=DAZ3;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25115855	25115926	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000660;gene_id=HG03009_ch_G0000239;Parent=HG03009_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG03009_ch_T0000660:6;Name=DAZ3;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25115927	25118250	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000660;gene_id=HG03009_ch_G0000239;Parent=HG03009_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG03009_ch_T0000660:7;Name=DAZ3;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25118251	25118322	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000660;gene_id=HG03009_ch_G0000239;Parent=HG03009_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG03009_ch_T0000660:8;Name=DAZ3;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25118251	25118322	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000660;gene_id=HG03009_ch_G0000239;Parent=HG03009_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG03009_ch_T0000660:7;Name=DAZ3;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25118323	25120641	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000660;gene_id=HG03009_ch_G0000239;Parent=HG03009_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG03009_ch_T0000660:8;Name=DAZ3;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25120642	25120713	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000660;gene_id=HG03009_ch_G0000239;Parent=HG03009_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG03009_ch_T0000660:9;Name=DAZ3;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25120642	25120713	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000660;gene_id=HG03009_ch_G0000239;Parent=HG03009_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG03009_ch_T0000660:8;Name=DAZ3;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25120714	25123086	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000660;gene_id=HG03009_ch_G0000239;Parent=HG03009_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG03009_ch_T0000660:9;Name=DAZ3;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25123087	25123158	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000660;gene_id=HG03009_ch_G0000239;Parent=HG03009_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG03009_ch_T0000660:10;Name=DAZ3;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25123087	25123158	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000660;gene_id=HG03009_ch_G0000239;Parent=HG03009_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG03009_ch_T0000660:9;Name=DAZ3;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25123159	25135399	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000660;gene_id=HG03009_ch_G0000239;Parent=HG03009_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG03009_ch_T0000660:10;Name=DAZ3;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25135400	25135539	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000660;gene_id=HG03009_ch_G0000239;Parent=HG03009_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG03009_ch_T0000660:11;Name=DAZ3;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25135400	25135539	.	-	2	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000660;gene_id=HG03009_ch_G0000239;Parent=HG03009_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG03009_ch_T0000660:10;Name=DAZ3;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25135540	25135628	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000660;gene_id=HG03009_ch_G0000239;Parent=HG03009_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG03009_ch_T0000660:11;Name=DAZ3;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25135629	25135692	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000660;gene_id=HG03009_ch_G0000239;Parent=HG03009_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG03009_ch_T0000660:12;Name=DAZ3;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25135629	25135692	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000660;gene_id=HG03009_ch_G0000239;Parent=HG03009_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG03009_ch_T0000660:11;Name=DAZ3;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25135693	25136128	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000660;gene_id=HG03009_ch_G0000239;Parent=HG03009_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG03009_ch_T0000660:12;Name=DAZ3;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25136129	25136180	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000660;gene_id=HG03009_ch_G0000239;Parent=HG03009_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG03009_ch_T0000660:13;Name=DAZ3;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25136129	25136180	.	-	1	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000660;gene_id=HG03009_ch_G0000239;Parent=HG03009_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG03009_ch_T0000660:12;Name=DAZ3;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25136181	25136740	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000660;gene_id=HG03009_ch_G0000239;Parent=HG03009_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG03009_ch_T0000660:13;Name=DAZ3;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25136741	25136832	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000660;gene_id=HG03009_ch_G0000239;Parent=HG03009_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG03009_ch_T0000660:14;Name=DAZ3;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25136741	25136832	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000660;gene_id=HG03009_ch_G0000239;Parent=HG03009_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG03009_ch_T0000660:13;Name=DAZ3;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25136833	25137106	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000660;gene_id=HG03009_ch_G0000239;Parent=HG03009_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG03009_ch_T0000660:14;Name=DAZ3;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25137107	25137253	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000660;gene_id=HG03009_ch_G0000239;Parent=HG03009_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG03009_ch_T0000660:15;Name=DAZ3;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25137107	25137253	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000660;gene_id=HG03009_ch_G0000239;Parent=HG03009_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG03009_ch_T0000660:14;Name=DAZ3;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25137254	25154701	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000660;gene_id=HG03009_ch_G0000239;Parent=HG03009_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG03009_ch_T0000660:15;Name=DAZ3;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25154702	25154912	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000660;gene_id=HG03009_ch_G0000239;Parent=HG03009_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG03009_ch_T0000660:16;Name=DAZ3;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25154702	25154704	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000660;gene_id=HG03009_ch_G0000239;Parent=HG03009_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG03009_ch_T0000660:15;Name=DAZ3;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	25154702	25154704	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000660;gene_id=HG03009_ch_G0000239;Parent=HG03009_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=start_codon:HG03009_ch_T0000660;Name=DAZ3;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	25175361	25235323	.	+	.	source_gene_common_name=DAZ2;source_gene=hg002_chrY_paternal_601;gene_id=HG03009_ch_G0000240;gene_biotype=protein_coding;gene_name=DAZ2;gene_sources=liftoff;ID=HG03009_ch_G0000240;Name=DAZ2
HG03009_chrY	CAT	transcript	25175361	25235323	100	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000661;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_G0000240;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=HG03009_ch_T0000661;Name=DAZ2
HG03009_chrY	CAT	exon	25175361	25175647	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000661;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000661;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000661:0;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25175645	25175647	.	+	0	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000661;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000661;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000661:0;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	25175645	25175647	.	+	0	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000661;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000661;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=start_codon:HG03009_ch_T0000661;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25175648	25182246	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000661;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000661;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000661:0;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25182247	25182393	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000661;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000661;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000661:1;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25182247	25182393	.	+	0	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000661;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000661;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000661:1;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25182394	25182667	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000661;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000661;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000661:1;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25182668	25182759	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000661;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000661;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000661:2;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25182668	25182759	.	+	0	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000661;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000661;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000661:2;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25182760	25183319	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000661;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000661;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000661:2;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25183320	25183371	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000661;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000661;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000661:3;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25183320	25183371	.	+	1	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000661;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000661;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000661:3;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25183372	25183807	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000661;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000661;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000661:3;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25183808	25183871	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000661;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000661;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000661:4;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25183808	25183871	.	+	0	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000661;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000661;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000661:4;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25183872	25183960	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000661;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000661;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000661:4;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25183961	25184100	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000661;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000661;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000661:5;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25183961	25184100	.	+	2	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000661;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000661;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000661:5;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25184101	25185500	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000661;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000661;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000661:5;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25185501	25185572	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000661;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000661;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000661:6;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25185501	25185572	.	+	0	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000661;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000661;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000661:6;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25185573	25187944	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000661;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000661;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000661:6;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25187945	25188016	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000661;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000661;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000661:7;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25187945	25188016	.	+	0	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000661;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000661;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000661:7;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25188017	25190335	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000661;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000661;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000661:7;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25190336	25190407	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000661;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000661;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000661:8;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25190336	25190407	.	+	0	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000661;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000661;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000661:8;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25190408	25192731	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000661;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000661;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000661:8;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25192732	25192803	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000661;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000661;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000661:9;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25192732	25192803	.	+	0	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000661;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000661;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000661:9;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25192804	25195114	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000661;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000661;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000661:9;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25195115	25195186	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000661;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000661;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000661:10;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25195115	25195186	.	+	0	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000661;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000661;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000661:10;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25195187	25212060	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000661;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000661;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000661:10;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25212061	25212132	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000661;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000661;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000661:11;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25212061	25212132	.	+	0	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000661;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000661;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000661:11;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25212133	25214444	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000661;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000661;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000661:11;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25214445	25214516	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000661;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000661;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000661:12;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25214445	25214516	.	+	0	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000661;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000661;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000661:12;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25214517	25216828	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000661;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000661;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000661:12;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25216829	25216900	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000661;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000661;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000661:13;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25216829	25216900	.	+	0	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000661;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000661;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000661:13;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25216901	25219212	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000661;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000661;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000661:13;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25219213	25219284	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000661;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000661;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000661:14;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25219213	25219284	.	+	0	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000661;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000661;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000661:14;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25219285	25221596	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000661;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000661;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000661:14;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25221597	25221668	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000661;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000661;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000661:15;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25221597	25221668	.	+	0	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000661;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000661;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000661:15;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25221669	25223981	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000661;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000661;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000661:15;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25223982	25224053	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000661;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000661;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000661:16;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25223982	25224053	.	+	0	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000661;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000661;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000661:16;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25224054	25224797	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000661;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000661;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000661:16;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25224798	25224832	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000661;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000661;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000661:17;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25224798	25224832	.	+	0	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000661;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000661;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000661:17;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25224833	25229405	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000661;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000661;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000661:17;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25229406	25229504	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000661;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000661;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000661:18;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25229406	25229469	.	+	1	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000661;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000661;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000661:18;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	25229467	25229469	.	+	0	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000661;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000661;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=stop_codon:HG03009_ch_T0000661;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25229505	25233466	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000661;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000661;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000661:18;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25233467	25235323	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000661;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000661;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000661:19;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	25175361	25235323	100	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000662;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_G0000240;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=HG03009_ch_T0000662;Name=DAZ2
HG03009_chrY	CAT	exon	25175361	25175647	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000662;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000662;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000662:0;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25175645	25175647	.	+	0	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000662;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000662;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000662:0;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	25175645	25175647	.	+	0	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000662;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000662;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=start_codon:HG03009_ch_T0000662;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25175648	25182246	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000662;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000662;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000662:0;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25182247	25182393	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000662;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000662;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000662:1;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25182247	25182393	.	+	0	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000662;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000662;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000662:1;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25182394	25182667	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000662;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000662;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000662:1;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25182668	25182759	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000662;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000662;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000662:2;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25182668	25182759	.	+	0	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000662;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000662;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000662:2;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25182760	25183319	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000662;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000662;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000662:2;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25183320	25183371	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000662;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000662;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000662:3;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25183320	25183371	.	+	1	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000662;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000662;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000662:3;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25183372	25183807	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000662;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000662;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000662:3;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25183808	25183871	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000662;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000662;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000662:4;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25183808	25183871	.	+	0	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000662;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000662;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000662:4;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25183872	25183960	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000662;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000662;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000662:4;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25183961	25184100	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000662;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000662;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000662:5;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25183961	25184100	.	+	2	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000662;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000662;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000662:5;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25184101	25185500	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000662;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000662;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000662:5;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25185501	25185572	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000662;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000662;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000662:6;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25185501	25185572	.	+	0	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000662;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000662;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000662:6;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25185573	25187944	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000662;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000662;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000662:6;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25187945	25188016	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000662;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000662;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000662:7;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25187945	25188016	.	+	0	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000662;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000662;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000662:7;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25188017	25195114	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000662;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000662;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000662:7;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25195115	25195186	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000662;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000662;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000662:8;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25195115	25195186	.	+	0	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000662;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000662;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000662:8;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25195187	25212060	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000662;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000662;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000662:8;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25212061	25212132	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000662;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000662;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000662:9;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25212061	25212132	.	+	0	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000662;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000662;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000662:9;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25212133	25214444	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000662;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000662;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000662:9;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25214445	25214516	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000662;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000662;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000662:10;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25214445	25214516	.	+	0	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000662;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000662;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000662:10;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25214517	25216828	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000662;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000662;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000662:10;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25216829	25216900	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000662;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000662;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000662:11;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25216829	25216900	.	+	0	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000662;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000662;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000662:11;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25216901	25223981	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000662;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000662;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000662:11;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25223982	25224053	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000662;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000662;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000662:12;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25223982	25224053	.	+	0	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000662;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000662;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000662:12;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25224054	25224797	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000662;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000662;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000662:12;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25224798	25224832	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000662;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000662;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000662:13;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25224798	25224832	.	+	0	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000662;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000662;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000662:13;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25224833	25229405	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000662;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000662;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000662:13;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25229406	25229504	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000662;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000662;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000662:14;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25229406	25229469	.	+	1	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000662;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000662;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000662:14;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	25229467	25229469	.	+	0	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000662;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000662;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=stop_codon:HG03009_ch_T0000662;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25229505	25233466	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000662;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000662;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000662:14;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25233467	25235323	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000662;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000662;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000662:15;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	25175361	25235323	100	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000663;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_G0000240;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=HG03009_ch_T0000663;Name=DAZ2
HG03009_chrY	CAT	exon	25175361	25175647	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000663;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000663:0;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25175645	25175647	.	+	0	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000663;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000663:0;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	25175645	25175647	.	+	0	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000663;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=start_codon:HG03009_ch_T0000663;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25175648	25182246	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000663;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000663:0;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25182247	25182393	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000663;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000663:1;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25182247	25182393	.	+	0	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000663;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000663:1;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25182394	25182667	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000663;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000663:1;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25182668	25182759	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000663;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000663:2;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25182668	25182759	.	+	0	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000663;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000663:2;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25182760	25183319	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000663;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000663:2;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25183320	25183371	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000663;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000663:3;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25183320	25183371	.	+	1	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000663;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000663:3;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25183372	25183807	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000663;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000663:3;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25183808	25183871	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000663;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000663:4;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25183808	25183871	.	+	0	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000663;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000663:4;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25183872	25183960	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000663;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000663:4;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25183961	25184100	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000663;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000663:5;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25183961	25184100	.	+	2	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000663;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000663:5;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25184101	25185500	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000663;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000663:5;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25185501	25185572	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000663;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000663:6;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25185501	25185572	.	+	0	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000663;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000663:6;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25185573	25187944	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000663;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000663:6;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25187945	25188016	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000663;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000663:7;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25187945	25188016	.	+	0	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000663;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000663:7;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25188017	25190335	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000663;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000663:7;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25190336	25190407	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000663;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000663:8;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25190336	25190407	.	+	0	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000663;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000663:8;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25190408	25192731	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000663;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000663:8;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25192732	25192803	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000663;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000663:9;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25192732	25192803	.	+	0	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000663;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000663:9;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25192804	25195114	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000663;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000663:9;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25195115	25195186	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000663;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000663:10;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25195115	25195186	.	+	0	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000663;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000663:10;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25195187	25199887	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000663;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000663:10;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25199888	25199959	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000663;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000663:11;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25199888	25199959	.	+	0	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000663;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000663:11;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25199960	25212060	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000663;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000663:11;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25212061	25212132	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000663;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000663:12;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25212061	25212132	.	+	0	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000663;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000663:12;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25212133	25214444	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000663;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000663:12;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25214445	25214516	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000663;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000663:13;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25214445	25214516	.	+	0	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000663;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000663:13;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25214517	25216828	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000663;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000663:13;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25216829	25216900	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000663;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000663:14;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25216829	25216900	.	+	0	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000663;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000663:14;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25216901	25219212	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000663;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000663:14;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25219213	25219284	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000663;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000663:15;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25219213	25219284	.	+	0	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000663;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000663:15;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25219285	25221596	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000663;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000663:15;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25221597	25221668	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000663;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000663:16;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25221597	25221668	.	+	0	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000663;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000663:16;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25221669	25223981	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000663;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000663:16;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25223982	25224053	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000663;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000663:17;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25223982	25224053	.	+	0	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000663;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000663:17;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25224054	25224797	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000663;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000663:17;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25224798	25224832	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000663;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000663:18;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25224798	25224832	.	+	0	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000663;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000663:18;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25224833	25229405	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000663;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000663:18;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25229406	25229504	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000663;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000663:19;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25229406	25229469	.	+	1	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000663;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000663:19;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	25229467	25229469	.	+	0	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000663;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=stop_codon:HG03009_ch_T0000663;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25229505	25233466	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000663;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000663:19;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25233467	25235323	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000663;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000663:20;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	25175437	25235323	100	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000664;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_G0000240;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=HG03009_ch_T0000664;Name=DAZ2
HG03009_chrY	CAT	exon	25175437	25175647	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000664;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000664:0;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25175645	25175647	.	+	0	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000664;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000664:0;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	25175645	25175647	.	+	0	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000664;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=start_codon:HG03009_ch_T0000664;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25175648	25182246	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000664;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000664:0;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25182247	25182393	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000664;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000664:1;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25182247	25182393	.	+	0	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000664;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000664:1;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25182394	25182667	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000664;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000664:1;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25182668	25182759	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000664;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000664:2;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25182668	25182759	.	+	0	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000664;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000664:2;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25182760	25183319	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000664;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000664:2;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25183320	25183371	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000664;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000664:3;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25183320	25183371	.	+	1	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000664;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000664:3;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25183372	25183807	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000664;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000664:3;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25183808	25183871	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000664;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000664:4;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25183808	25183871	.	+	0	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000664;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000664:4;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25183872	25183960	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000664;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000664:4;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25183961	25184100	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000664;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000664:5;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25183961	25184100	.	+	2	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000664;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000664:5;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25184101	25185500	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000664;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000664:5;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25185501	25185572	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000664;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000664:6;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25185501	25185572	.	+	0	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000664;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000664:6;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25185573	25187944	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000664;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000664:6;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25187945	25188016	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000664;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000664:7;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25187945	25188016	.	+	0	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000664;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000664:7;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25188017	25190335	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000664;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000664:7;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25190336	25190407	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000664;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000664:8;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25190336	25190407	.	+	0	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000664;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000664:8;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25190408	25192731	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000664;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000664:8;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25192732	25192803	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000664;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000664:9;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25192732	25192803	.	+	0	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000664;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000664:9;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25192804	25195114	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000664;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000664:9;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25195115	25195186	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000664;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000664:10;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25195115	25195186	.	+	0	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000664;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000664:10;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25195187	25197510	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000664;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000664:10;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25197511	25197582	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000664;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000664:11;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25197511	25197582	.	+	0	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000664;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000664:11;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25197583	25199887	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000664;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000664:11;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25199888	25199959	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000664;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000664:12;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25199888	25199959	.	+	0	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000664;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000664:12;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25199960	25212060	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000664;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000664:12;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25212061	25212132	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000664;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000664:13;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25212061	25212132	.	+	0	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000664;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000664:13;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25212133	25214444	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000664;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000664:13;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25214445	25214516	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000664;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000664:14;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25214445	25214516	.	+	0	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000664;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000664:14;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25214517	25216828	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000664;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000664:14;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25216829	25216900	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000664;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000664:15;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25216829	25216900	.	+	0	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000664;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000664:15;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25216901	25219212	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000664;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000664:15;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25219213	25219284	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000664;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000664:16;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25219213	25219284	.	+	0	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000664;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000664:16;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25219285	25221596	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000664;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000664:16;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25221597	25221668	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000664;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000664:17;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25221597	25221668	.	+	0	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000664;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000664:17;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25221669	25223981	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000664;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000664:17;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25223982	25224053	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000664;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000664:18;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25223982	25224053	.	+	0	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000664;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000664:18;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25224054	25224797	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000664;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000664:18;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25224798	25224832	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000664;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000664:19;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25224798	25224832	.	+	0	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000664;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000664:19;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25224833	25229405	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000664;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000664:19;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25229406	25229504	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000664;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000664:20;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25229406	25229469	.	+	1	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000664;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000664:20;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	25229467	25229469	.	+	0	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000664;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=stop_codon:HG03009_ch_T0000664;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25229505	25233466	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000664;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000664:20;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25233467	25235323	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000664;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000664:21;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	25175437	25235323	100	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000665;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_G0000240;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=HG03009_ch_T0000665;Name=DAZ2
HG03009_chrY	CAT	exon	25175437	25175647	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000665;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000665:0;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25175645	25175647	.	+	0	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000665;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000665:0;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	25175645	25175647	.	+	0	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000665;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=start_codon:HG03009_ch_T0000665;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25175648	25182246	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000665;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000665:0;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25182247	25182393	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000665;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000665:1;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25182247	25182393	.	+	0	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000665;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000665:1;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25182394	25182667	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000665;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000665:1;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25182668	25182759	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000665;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000665:2;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25182668	25182759	.	+	0	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000665;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000665:2;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25182760	25183319	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000665;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000665:2;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25183320	25183371	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000665;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000665:3;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25183320	25183371	.	+	1	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000665;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000665:3;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25183372	25183807	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000665;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000665:3;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25183808	25183871	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000665;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000665:4;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25183808	25183871	.	+	0	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000665;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000665:4;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25183872	25183960	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000665;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000665:4;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25183961	25184100	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000665;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000665:5;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25183961	25184100	.	+	2	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000665;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000665:5;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25184101	25185500	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000665;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000665:5;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25185501	25185572	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000665;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000665:6;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25185501	25185572	.	+	0	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000665;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000665:6;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25185573	25187944	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000665;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000665:6;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25187945	25188016	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000665;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000665:7;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25187945	25188016	.	+	0	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000665;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000665:7;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25188017	25190335	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000665;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000665:7;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25190336	25190407	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000665;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000665:8;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25190336	25190407	.	+	0	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000665;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000665:8;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25190408	25192731	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000665;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000665:8;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25192732	25192803	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000665;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000665:9;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25192732	25192803	.	+	0	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000665;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000665:9;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25192804	25195114	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000665;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000665:9;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25195115	25195186	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000665;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000665:10;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25195115	25195186	.	+	0	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000665;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000665:10;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25195187	25197510	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000665;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000665:10;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25197511	25197582	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000665;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000665:11;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25197511	25197582	.	+	0	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000665;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000665:11;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25197583	25199887	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000665;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000665:11;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25199888	25199959	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000665;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000665:12;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25199888	25199959	.	+	0	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000665;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000665:12;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25199960	25212060	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000665;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000665:12;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25212061	25212132	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000665;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000665:13;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25212061	25212132	.	+	0	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000665;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000665:13;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25212133	25214444	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000665;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000665:13;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25214445	25214516	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000665;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000665:14;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25214445	25214516	.	+	0	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000665;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000665:14;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25214517	25216828	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000665;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000665:14;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25216829	25216900	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000665;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000665:15;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25216829	25216900	.	+	0	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000665;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000665:15;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25216901	25219212	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000665;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000665:15;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25219213	25219284	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000665;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000665:16;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25219213	25219284	.	+	0	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000665;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000665:16;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25219285	25223981	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000665;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000665:16;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25223982	25224053	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000665;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000665:17;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25223982	25224053	.	+	0	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000665;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000665:17;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25224054	25224797	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000665;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000665:17;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25224798	25224832	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000665;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000665:18;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25224798	25224832	.	+	0	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000665;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000665:18;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25224833	25229405	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000665;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000665:18;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25229406	25229504	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000665;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000665:19;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25229406	25229469	.	+	1	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000665;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000665:19;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	25229467	25229469	.	+	0	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000665;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=stop_codon:HG03009_ch_T0000665;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25229505	25233466	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000665;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000665:19;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25233467	25235323	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000665;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000665:20;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	25175437	25235323	100	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000666;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_G0000240;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=HG03009_ch_T0000666;Name=DAZ2
HG03009_chrY	CAT	exon	25175437	25175647	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000666;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000666:0;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25175645	25175647	.	+	0	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000666;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000666:0;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	25175645	25175647	.	+	0	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000666;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=start_codon:HG03009_ch_T0000666;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25175648	25182667	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000666;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000666:0;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25182668	25182759	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000666;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000666:1;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25182668	25182759	.	+	0	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000666;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000666:1;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25182760	25183319	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000666;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000666:1;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25183320	25183371	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000666;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000666:2;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25183320	25183371	.	+	1	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000666;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000666:2;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25183372	25183807	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000666;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000666:2;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25183808	25183871	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000666;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000666:3;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25183808	25183871	.	+	0	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000666;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000666:3;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25183872	25183960	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000666;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000666:3;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25183961	25184100	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000666;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000666:4;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25183961	25184100	.	+	2	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000666;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000666:4;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25184101	25185500	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000666;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000666:4;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25185501	25185572	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000666;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000666:5;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25185501	25185572	.	+	0	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000666;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000666:5;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25185573	25187944	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000666;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000666:5;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25187945	25188016	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000666;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000666:6;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25187945	25188016	.	+	0	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000666;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000666:6;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25188017	25190335	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000666;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000666:6;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25190336	25190407	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000666;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000666:7;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25190336	25190407	.	+	0	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000666;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000666:7;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25190408	25192731	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000666;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000666:7;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25192732	25192803	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000666;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000666:8;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25192732	25192803	.	+	0	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000666;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000666:8;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25192804	25195114	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000666;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000666:8;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25195115	25195186	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000666;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000666:9;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25195115	25195186	.	+	0	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000666;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000666:9;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25195187	25197510	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000666;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000666:9;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25197511	25197582	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000666;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000666:10;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25197511	25197582	.	+	0	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000666;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000666:10;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25197583	25199887	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000666;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000666:10;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25199888	25199959	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000666;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000666:11;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25199888	25199959	.	+	0	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000666;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000666:11;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25199960	25212060	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000666;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000666:11;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25212061	25212132	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000666;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000666:12;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25212061	25212132	.	+	0	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000666;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000666:12;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25212133	25214444	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000666;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000666:12;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25214445	25214516	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000666;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000666:13;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25214445	25214516	.	+	0	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000666;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000666:13;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25214517	25216828	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000666;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000666:13;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25216829	25216900	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000666;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000666:14;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25216829	25216900	.	+	0	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000666;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000666:14;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25216901	25219212	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000666;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000666:14;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25219213	25219284	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000666;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000666:15;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25219213	25219284	.	+	0	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000666;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000666:15;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25219285	25221596	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000666;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000666:15;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25221597	25221668	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000666;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000666:16;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25221597	25221668	.	+	0	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000666;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000666:16;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25221669	25223981	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000666;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000666:16;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25223982	25224053	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000666;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000666:17;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25223982	25224053	.	+	0	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000666;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000666:17;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25224054	25224797	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000666;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000666:17;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25224798	25224832	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000666;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000666:18;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25224798	25224832	.	+	0	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000666;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000666:18;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25224833	25229405	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000666;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000666:18;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25229406	25229504	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000666;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000666:19;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25229406	25229469	.	+	1	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000666;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000666:19;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	25229467	25229469	.	+	0	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000666;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=stop_codon:HG03009_ch_T0000666;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25229505	25233466	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000666;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000666:19;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25233467	25235323	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000666;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000666:20;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	25175437	25235323	100	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000667;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_G0000240;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=HG03009_ch_T0000667;Name=DAZ2
HG03009_chrY	CAT	exon	25175437	25175647	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000667;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000667;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000667:0;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25175645	25175647	.	+	0	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000667;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000667;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000667:0;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	25175645	25175647	.	+	0	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000667;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000667;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=start_codon:HG03009_ch_T0000667;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25175648	25182246	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000667;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000667;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000667:0;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25182247	25182393	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000667;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000667;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000667:1;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25182247	25182393	.	+	0	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000667;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000667;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000667:1;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25182394	25182667	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000667;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000667;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000667:1;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25182668	25182759	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000667;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000667;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000667:2;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25182668	25182759	.	+	0	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000667;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000667;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000667:2;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25182760	25183319	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000667;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000667;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000667:2;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25183320	25183371	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000667;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000667;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000667:3;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25183320	25183371	.	+	1	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000667;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000667;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000667:3;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25183372	25183807	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000667;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000667;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000667:3;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25183808	25183871	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000667;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000667;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000667:4;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25183808	25183871	.	+	0	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000667;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000667;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000667:4;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25183872	25183960	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000667;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000667;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000667:4;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25183961	25184100	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000667;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000667;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000667:5;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25183961	25184100	.	+	2	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000667;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000667;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000667:5;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25184101	25185500	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000667;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000667;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000667:5;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25185501	25185572	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000667;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000667;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000667:6;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25185501	25185572	.	+	0	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000667;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000667;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000667:6;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25185573	25187944	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000667;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000667;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000667:6;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25187945	25188016	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000667;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000667;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000667:7;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25187945	25188016	.	+	0	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000667;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000667;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000667:7;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25188017	25190335	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000667;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000667;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000667:7;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25190336	25190407	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000667;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000667;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000667:8;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25190336	25190407	.	+	0	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000667;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000667;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000667:8;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25190408	25192731	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000667;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000667;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000667:8;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25192732	25192803	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000667;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000667;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000667:9;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25192732	25192803	.	+	0	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000667;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000667;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000667:9;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25192804	25195114	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000667;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000667;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000667:9;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25195115	25195186	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000667;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000667;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000667:10;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25195115	25195186	.	+	0	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000667;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000667;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000667:10;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25195187	25199887	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000667;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000667;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000667:10;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25199888	25199959	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000667;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000667;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000667:11;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25199888	25199959	.	+	0	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000667;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000667;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000667:11;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25199960	25212060	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000667;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000667;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000667:11;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25212061	25212132	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000667;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000667;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000667:12;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25212061	25212132	.	+	0	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000667;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000667;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000667:12;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25212133	25214444	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000667;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000667;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000667:12;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25214445	25214516	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000667;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000667;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000667:13;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25214445	25214516	.	+	0	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000667;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000667;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000667:13;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25214517	25216828	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000667;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000667;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000667:13;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25216829	25216900	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000667;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000667;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000667:14;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25216829	25216900	.	+	0	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000667;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000667;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000667:14;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25216901	25219212	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000667;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000667;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000667:14;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25219213	25219284	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000667;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000667;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000667:15;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25219213	25219284	.	+	0	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000667;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000667;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000667:15;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25219285	25221596	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000667;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000667;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000667:15;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25221597	25221668	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000667;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000667;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000667:16;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25221597	25221668	.	+	0	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000667;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000667;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000667:16;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25221669	25223981	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000667;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000667;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000667:16;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25223982	25224053	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000667;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000667;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000667:17;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25223982	25224053	.	+	0	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000667;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000667;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000667:17;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25224054	25224797	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000667;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000667;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000667:17;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25224798	25224832	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000667;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000667;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000667:18;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25224798	25224832	.	+	0	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000667;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000667;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000667:18;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25224833	25229405	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000667;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000667;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000667:18;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25229406	25229504	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000667;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000667;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000667:19;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25229406	25229469	.	+	1	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000667;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000667;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG03009_ch_T0000667:19;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	25229467	25229469	.	+	0	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000667;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000667;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=stop_codon:HG03009_ch_T0000667;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25229505	25233466	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000667;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000667;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG03009_ch_T0000667:19;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25233467	25235323	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG03009_ch_T0000667;gene_id=HG03009_ch_G0000240;Parent=HG03009_ch_T0000667;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG03009_ch_T0000667:20;Name=DAZ2;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	25254939	25258276	.	+	.	source_gene_common_name=LOC105377239;source_gene=hg002_chrY_paternal_602;gene_id=HG03009_ch_G0000241;gene_biotype=lncRNA;gene_name=LOC105377239;gene_sources=liftoff;ID=HG03009_ch_G0000241;Name=LOC105377239
HG03009_chrY	CAT	transcript	25254939	25258276	1000	+	.	source_transcript=hg002_chrY_paternal_602.1;source_transcript_name=hg002_chrY_paternal_602.1;source_gene=hg002_chrY_paternal_602;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_602;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_602.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_602.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377239;transcript_id=HG03009_ch_T0000668;gene_id=HG03009_ch_G0000241;Parent=HG03009_ch_G0000241;transcript_name=hg002_chrY_paternal_602.1;gene_name=LOC105377239;ID=HG03009_ch_T0000668;Name=LOC105377239
HG03009_chrY	CAT	exon	25254939	25255117	.	+	.	source_transcript=hg002_chrY_paternal_602.1;source_transcript_name=hg002_chrY_paternal_602.1;source_gene=hg002_chrY_paternal_602;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_602;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_602.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_602.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377239;transcript_id=HG03009_ch_T0000668;gene_id=HG03009_ch_G0000241;Parent=HG03009_ch_T0000668;transcript_name=hg002_chrY_paternal_602.1;gene_name=LOC105377239;ID=exon:HG03009_ch_T0000668:0;Name=LOC105377239;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25255118	25255779	.	+	.	source_transcript=hg002_chrY_paternal_602.1;source_transcript_name=hg002_chrY_paternal_602.1;source_gene=hg002_chrY_paternal_602;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_602;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_602.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_602.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377239;transcript_id=HG03009_ch_T0000668;gene_id=HG03009_ch_G0000241;Parent=HG03009_ch_T0000668;transcript_name=hg002_chrY_paternal_602.1;gene_name=LOC105377239;ID=intron:HG03009_ch_T0000668:0;Name=LOC105377239;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25255780	25255844	.	+	.	source_transcript=hg002_chrY_paternal_602.1;source_transcript_name=hg002_chrY_paternal_602.1;source_gene=hg002_chrY_paternal_602;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_602;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_602.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_602.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377239;transcript_id=HG03009_ch_T0000668;gene_id=HG03009_ch_G0000241;Parent=HG03009_ch_T0000668;transcript_name=hg002_chrY_paternal_602.1;gene_name=LOC105377239;ID=exon:HG03009_ch_T0000668:1;Name=LOC105377239;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25255845	25258175	.	+	.	source_transcript=hg002_chrY_paternal_602.1;source_transcript_name=hg002_chrY_paternal_602.1;source_gene=hg002_chrY_paternal_602;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_602;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_602.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_602.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377239;transcript_id=HG03009_ch_T0000668;gene_id=HG03009_ch_G0000241;Parent=HG03009_ch_T0000668;transcript_name=hg002_chrY_paternal_602.1;gene_name=LOC105377239;ID=intron:HG03009_ch_T0000668:1;Name=LOC105377239;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25258176	25258276	.	+	.	source_transcript=hg002_chrY_paternal_602.1;source_transcript_name=hg002_chrY_paternal_602.1;source_gene=hg002_chrY_paternal_602;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_602;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_602.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_602.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377239;transcript_id=HG03009_ch_T0000668;gene_id=HG03009_ch_G0000241;Parent=HG03009_ch_T0000668;transcript_name=hg002_chrY_paternal_602.1;gene_name=LOC105377239;ID=exon:HG03009_ch_T0000668:2;Name=LOC105377239;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	25254939	25258276	1000	+	.	source_transcript=hg002_chrY_paternal_602.2;source_transcript_name=hg002_chrY_paternal_602.1;source_gene=hg002_chrY_paternal_602;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_602;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_602.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_602.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377239;transcript_id=HG03009_ch_T0000669;gene_id=HG03009_ch_G0000241;Parent=HG03009_ch_G0000241;transcript_name=hg002_chrY_paternal_602.1;gene_name=LOC105377239;ID=HG03009_ch_T0000669;Name=LOC105377239
HG03009_chrY	CAT	exon	25254939	25255117	.	+	.	source_transcript=hg002_chrY_paternal_602.2;source_transcript_name=hg002_chrY_paternal_602.1;source_gene=hg002_chrY_paternal_602;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_602;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_602.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_602.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377239;transcript_id=HG03009_ch_T0000669;gene_id=HG03009_ch_G0000241;Parent=HG03009_ch_T0000669;transcript_name=hg002_chrY_paternal_602.1;gene_name=LOC105377239;ID=exon:HG03009_ch_T0000669:0;Name=LOC105377239;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25255118	25255779	.	+	.	source_transcript=hg002_chrY_paternal_602.2;source_transcript_name=hg002_chrY_paternal_602.1;source_gene=hg002_chrY_paternal_602;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_602;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_602.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_602.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377239;transcript_id=HG03009_ch_T0000669;gene_id=HG03009_ch_G0000241;Parent=HG03009_ch_T0000669;transcript_name=hg002_chrY_paternal_602.1;gene_name=LOC105377239;ID=intron:HG03009_ch_T0000669:0;Name=LOC105377239;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25255780	25255817	.	+	.	source_transcript=hg002_chrY_paternal_602.2;source_transcript_name=hg002_chrY_paternal_602.1;source_gene=hg002_chrY_paternal_602;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_602;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_602.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_602.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377239;transcript_id=HG03009_ch_T0000669;gene_id=HG03009_ch_G0000241;Parent=HG03009_ch_T0000669;transcript_name=hg002_chrY_paternal_602.1;gene_name=LOC105377239;ID=exon:HG03009_ch_T0000669:1;Name=LOC105377239;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25255818	25258175	.	+	.	source_transcript=hg002_chrY_paternal_602.2;source_transcript_name=hg002_chrY_paternal_602.1;source_gene=hg002_chrY_paternal_602;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_602;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_602.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_602.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377239;transcript_id=HG03009_ch_T0000669;gene_id=HG03009_ch_G0000241;Parent=HG03009_ch_T0000669;transcript_name=hg002_chrY_paternal_602.1;gene_name=LOC105377239;ID=intron:HG03009_ch_T0000669:1;Name=LOC105377239;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25258176	25258276	.	+	.	source_transcript=hg002_chrY_paternal_602.2;source_transcript_name=hg002_chrY_paternal_602.1;source_gene=hg002_chrY_paternal_602;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_602;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_602.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_602.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377239;transcript_id=HG03009_ch_T0000669;gene_id=HG03009_ch_G0000241;Parent=HG03009_ch_T0000669;transcript_name=hg002_chrY_paternal_602.1;gene_name=LOC105377239;ID=exon:HG03009_ch_T0000669:2;Name=LOC105377239;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	25367039	25367176	.	-	.	source_gene_common_name=LOC124900506;source_gene=hg002_chrY_paternal_597;alternative_source_transcripts=hg002_chrY_paternal_597.1;gene_id=HG03009_ch_G0000242;gene_biotype=snoRNA;gene_name=LOC124900506;gene_sources=liftoff;ID=HG03009_ch_G0000242;Name=LOC124900506
HG03009_chrY	CAT	transcript	25367039	25367176	1000	-	.	source_transcript=hg002_chrY_paternal_597.1;source_transcript_name=hg002_chrY_paternal_597.1;source_gene=hg002_chrY_paternal_597;source_gene_biotype=snoRNA;original_gene_id=hg002_chrY_paternal_597;gene_biotype=snoRNA;transcript_biotype=snoRNA;alignment_id=hg002_chrY_paternal_597.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_597.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124900506;alternative_source_transcripts=hg002_chrY_paternal_597.1;transcript_id=HG03009_ch_T0000670;gene_id=HG03009_ch_G0000242;Parent=HG03009_ch_G0000242;transcript_name=hg002_chrY_paternal_597.1;gene_name=LOC124900506;ID=HG03009_ch_T0000670;Name=LOC124900506
HG03009_chrY	CAT	exon	25367039	25367176	.	-	.	source_transcript=hg002_chrY_paternal_597.1;source_transcript_name=hg002_chrY_paternal_597.1;source_gene=hg002_chrY_paternal_597;source_gene_biotype=snoRNA;original_gene_id=hg002_chrY_paternal_597;gene_biotype=snoRNA;transcript_biotype=snoRNA;alignment_id=hg002_chrY_paternal_597.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_597.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124900506;alternative_source_transcripts=hg002_chrY_paternal_597.1;transcript_id=HG03009_ch_T0000670;gene_id=HG03009_ch_G0000242;Parent=HG03009_ch_T0000670;transcript_name=hg002_chrY_paternal_597.1;gene_name=LOC124900506;ID=exon:HG03009_ch_T0000670:0;Name=LOC124900506;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	25379180	25420683	.	+	.	source_gene_common_name=REREP1Y;source_gene=hg002_chrY_paternal_596;alternative_source_transcripts=hg002_chrY_paternal_596.1;gene_id=HG03009_ch_G0000243;gene_biotype=transcribed_pseudogene;gene_name=REREP1Y;gene_sources=liftoff;ID=HG03009_ch_G0000243;Name=REREP1Y
HG03009_chrY	CAT	transcript	25379180	25420683	1000	+	.	source_transcript=hg002_chrY_paternal_596.1;source_transcript_name=hg002_chrY_paternal_596.1;source_gene=hg002_chrY_paternal_596;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_596;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_596.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_596.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP1Y;alternative_source_transcripts=hg002_chrY_paternal_596.1;transcript_id=HG03009_ch_T0000671;gene_id=HG03009_ch_G0000243;Parent=HG03009_ch_G0000243;transcript_name=hg002_chrY_paternal_596.1;gene_name=REREP1Y;ID=HG03009_ch_T0000671;Name=REREP1Y
HG03009_chrY	CAT	exon	25379180	25379582	.	+	.	source_transcript=hg002_chrY_paternal_596.1;source_transcript_name=hg002_chrY_paternal_596.1;source_gene=hg002_chrY_paternal_596;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_596;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_596.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_596.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP1Y;alternative_source_transcripts=hg002_chrY_paternal_596.1;transcript_id=HG03009_ch_T0000671;gene_id=HG03009_ch_G0000243;Parent=HG03009_ch_T0000671;transcript_name=hg002_chrY_paternal_596.1;gene_name=REREP1Y;ID=exon:HG03009_ch_T0000671:0;Name=REREP1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25379583	25406402	.	+	.	source_transcript=hg002_chrY_paternal_596.1;source_transcript_name=hg002_chrY_paternal_596.1;source_gene=hg002_chrY_paternal_596;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_596;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_596.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_596.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP1Y;alternative_source_transcripts=hg002_chrY_paternal_596.1;transcript_id=HG03009_ch_T0000671;gene_id=HG03009_ch_G0000243;Parent=HG03009_ch_T0000671;transcript_name=hg002_chrY_paternal_596.1;gene_name=REREP1Y;ID=intron:HG03009_ch_T0000671:0;Name=REREP1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25406403	25406475	.	+	.	source_transcript=hg002_chrY_paternal_596.1;source_transcript_name=hg002_chrY_paternal_596.1;source_gene=hg002_chrY_paternal_596;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_596;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_596.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_596.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP1Y;alternative_source_transcripts=hg002_chrY_paternal_596.1;transcript_id=HG03009_ch_T0000671;gene_id=HG03009_ch_G0000243;Parent=HG03009_ch_T0000671;transcript_name=hg002_chrY_paternal_596.1;gene_name=REREP1Y;ID=exon:HG03009_ch_T0000671:1;Name=REREP1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25406476	25416093	.	+	.	source_transcript=hg002_chrY_paternal_596.1;source_transcript_name=hg002_chrY_paternal_596.1;source_gene=hg002_chrY_paternal_596;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_596;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_596.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_596.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP1Y;alternative_source_transcripts=hg002_chrY_paternal_596.1;transcript_id=HG03009_ch_T0000671;gene_id=HG03009_ch_G0000243;Parent=HG03009_ch_T0000671;transcript_name=hg002_chrY_paternal_596.1;gene_name=REREP1Y;ID=intron:HG03009_ch_T0000671:1;Name=REREP1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25416094	25420683	.	+	.	source_transcript=hg002_chrY_paternal_596.1;source_transcript_name=hg002_chrY_paternal_596.1;source_gene=hg002_chrY_paternal_596;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_596;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_596.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_596.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP1Y;alternative_source_transcripts=hg002_chrY_paternal_596.1;transcript_id=HG03009_ch_T0000671;gene_id=HG03009_ch_G0000243;Parent=HG03009_ch_T0000671;transcript_name=hg002_chrY_paternal_596.1;gene_name=REREP1Y;ID=exon:HG03009_ch_T0000671:2;Name=REREP1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	25582113	25585237	.	+	.	source_gene_common_name=LOC107987349;source_gene=hg002_chrY_paternal_593;alternative_source_transcripts=hg002_chrY_paternal_593.1;gene_id=HG03009_ch_G0000244;gene_biotype=lncRNA;gene_name=LOC107987349;gene_sources=liftoff;ID=HG03009_ch_G0000244;Name=LOC107987349
HG03009_chrY	CAT	transcript	25582113	25585237	1000	+	.	source_transcript=hg002_chrY_paternal_593.1;source_transcript_name=hg002_chrY_paternal_593.1;source_gene=hg002_chrY_paternal_593;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_593;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_593.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_593.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987349;alternative_source_transcripts=hg002_chrY_paternal_593.1;transcript_id=HG03009_ch_T0000672;gene_id=HG03009_ch_G0000244;Parent=HG03009_ch_G0000244;transcript_name=hg002_chrY_paternal_593.1;gene_name=LOC107987349;ID=HG03009_ch_T0000672;Name=LOC107987349
HG03009_chrY	CAT	exon	25582113	25582195	.	+	.	source_transcript=hg002_chrY_paternal_593.1;source_transcript_name=hg002_chrY_paternal_593.1;source_gene=hg002_chrY_paternal_593;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_593;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_593.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_593.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987349;alternative_source_transcripts=hg002_chrY_paternal_593.1;transcript_id=HG03009_ch_T0000672;gene_id=HG03009_ch_G0000244;Parent=HG03009_ch_T0000672;transcript_name=hg002_chrY_paternal_593.1;gene_name=LOC107987349;ID=exon:HG03009_ch_T0000672:0;Name=LOC107987349;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25582196	25582312	.	+	.	source_transcript=hg002_chrY_paternal_593.1;source_transcript_name=hg002_chrY_paternal_593.1;source_gene=hg002_chrY_paternal_593;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_593;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_593.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_593.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987349;alternative_source_transcripts=hg002_chrY_paternal_593.1;transcript_id=HG03009_ch_T0000672;gene_id=HG03009_ch_G0000244;Parent=HG03009_ch_T0000672;transcript_name=hg002_chrY_paternal_593.1;gene_name=LOC107987349;ID=intron:HG03009_ch_T0000672:0;Name=LOC107987349;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25582313	25582373	.	+	.	source_transcript=hg002_chrY_paternal_593.1;source_transcript_name=hg002_chrY_paternal_593.1;source_gene=hg002_chrY_paternal_593;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_593;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_593.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_593.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987349;alternative_source_transcripts=hg002_chrY_paternal_593.1;transcript_id=HG03009_ch_T0000672;gene_id=HG03009_ch_G0000244;Parent=HG03009_ch_T0000672;transcript_name=hg002_chrY_paternal_593.1;gene_name=LOC107987349;ID=exon:HG03009_ch_T0000672:1;Name=LOC107987349;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25582374	25583908	.	+	.	source_transcript=hg002_chrY_paternal_593.1;source_transcript_name=hg002_chrY_paternal_593.1;source_gene=hg002_chrY_paternal_593;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_593;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_593.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_593.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987349;alternative_source_transcripts=hg002_chrY_paternal_593.1;transcript_id=HG03009_ch_T0000672;gene_id=HG03009_ch_G0000244;Parent=HG03009_ch_T0000672;transcript_name=hg002_chrY_paternal_593.1;gene_name=LOC107987349;ID=intron:HG03009_ch_T0000672:1;Name=LOC107987349;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25583909	25585237	.	+	.	source_transcript=hg002_chrY_paternal_593.1;source_transcript_name=hg002_chrY_paternal_593.1;source_gene=hg002_chrY_paternal_593;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_593;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_593.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_593.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987349;alternative_source_transcripts=hg002_chrY_paternal_593.1;transcript_id=HG03009_ch_T0000672;gene_id=HG03009_ch_G0000244;Parent=HG03009_ch_T0000672;transcript_name=hg002_chrY_paternal_593.1;gene_name=LOC107987349;ID=exon:HG03009_ch_T0000672:2;Name=LOC107987349;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	25881183	25886078	.	-	.	source_gene_common_name=TTTY3;source_gene=hg002_chrY_paternal_572;alternative_source_transcripts=hg002_chrY_paternal_572.1;gene_id=HG03009_ch_G0000245;gene_biotype=lncRNA;gene_name=TTTY3;gene_sources=liftoff;ID=HG03009_ch_G0000245;Name=TTTY3
HG03009_chrY	CAT	transcript	25881183	25886078	1000	-	.	source_transcript=hg002_chrY_paternal_572.1;source_transcript_name=hg002_chrY_paternal_572.1;source_gene=hg002_chrY_paternal_572;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_572;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_572.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_572.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3;alternative_source_transcripts=hg002_chrY_paternal_572.1;transcript_id=HG03009_ch_T0000673;gene_id=HG03009_ch_G0000245;Parent=HG03009_ch_G0000245;transcript_name=hg002_chrY_paternal_572.1;gene_name=TTTY3;ID=HG03009_ch_T0000673;Name=TTTY3
HG03009_chrY	CAT	exon	25881183	25881287	.	-	.	source_transcript=hg002_chrY_paternal_572.1;source_transcript_name=hg002_chrY_paternal_572.1;source_gene=hg002_chrY_paternal_572;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_572;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_572.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_572.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3;alternative_source_transcripts=hg002_chrY_paternal_572.1;transcript_id=HG03009_ch_T0000673;gene_id=HG03009_ch_G0000245;Parent=HG03009_ch_T0000673;transcript_name=hg002_chrY_paternal_572.1;gene_name=TTTY3;ID=exon:HG03009_ch_T0000673:0;Name=TTTY3;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25881288	25883641	.	-	.	source_transcript=hg002_chrY_paternal_572.1;source_transcript_name=hg002_chrY_paternal_572.1;source_gene=hg002_chrY_paternal_572;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_572;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_572.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_572.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3;alternative_source_transcripts=hg002_chrY_paternal_572.1;transcript_id=HG03009_ch_T0000673;gene_id=HG03009_ch_G0000245;Parent=HG03009_ch_T0000673;transcript_name=hg002_chrY_paternal_572.1;gene_name=TTTY3;ID=intron:HG03009_ch_T0000673:0;Name=TTTY3;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25883642	25883776	.	-	.	source_transcript=hg002_chrY_paternal_572.1;source_transcript_name=hg002_chrY_paternal_572.1;source_gene=hg002_chrY_paternal_572;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_572;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_572.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_572.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3;alternative_source_transcripts=hg002_chrY_paternal_572.1;transcript_id=HG03009_ch_T0000673;gene_id=HG03009_ch_G0000245;Parent=HG03009_ch_T0000673;transcript_name=hg002_chrY_paternal_572.1;gene_name=TTTY3;ID=exon:HG03009_ch_T0000673:1;Name=TTTY3;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25883777	25885974	.	-	.	source_transcript=hg002_chrY_paternal_572.1;source_transcript_name=hg002_chrY_paternal_572.1;source_gene=hg002_chrY_paternal_572;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_572;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_572.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_572.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3;alternative_source_transcripts=hg002_chrY_paternal_572.1;transcript_id=HG03009_ch_T0000673;gene_id=HG03009_ch_G0000245;Parent=HG03009_ch_T0000673;transcript_name=hg002_chrY_paternal_572.1;gene_name=TTTY3;ID=intron:HG03009_ch_T0000673:1;Name=TTTY3;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25885975	25886078	.	-	.	source_transcript=hg002_chrY_paternal_572.1;source_transcript_name=hg002_chrY_paternal_572.1;source_gene=hg002_chrY_paternal_572;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_572;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_572.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_572.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3;alternative_source_transcripts=hg002_chrY_paternal_572.1;transcript_id=HG03009_ch_T0000673;gene_id=HG03009_ch_G0000245;Parent=HG03009_ch_T0000673;transcript_name=hg002_chrY_paternal_572.1;gene_name=TTTY3;ID=exon:HG03009_ch_T0000673:2;Name=TTTY3;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	25989050	25992446	.	-	.	source_gene_common_name=CDY1;source_gene=hg002_chrY_paternal_638;alternative_source_transcripts=hg002_chrY_paternal_565.3;gene_id=HG03009_ch_G0000246;gene_biotype=protein_coding;gene_name=CDY1;gene_sources=liftoff;ID=HG03009_ch_G0000246;Name=CDY1
HG03009_chrY	CAT	transcript	25989050	25992444	1000	-	.	source_transcript=hg002_chrY_paternal_638.4;source_transcript_name=hg002_chrY_paternal_638.1;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_638.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_565.3;transcript_id=HG03009_ch_T0000674;gene_id=HG03009_ch_G0000246;Parent=HG03009_ch_G0000246;transcript_name=hg002_chrY_paternal_638.1;gene_name=CDY1;ID=HG03009_ch_T0000674;Name=CDY1
HG03009_chrY	CAT	exon	25989050	25989131	.	-	.	source_transcript=hg002_chrY_paternal_638.4;source_transcript_name=hg002_chrY_paternal_638.1;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_638.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_565.3;transcript_id=HG03009_ch_T0000674;gene_id=HG03009_ch_G0000246;Parent=HG03009_ch_T0000674;transcript_name=hg002_chrY_paternal_638.1;gene_name=CDY1;ID=exon:HG03009_ch_T0000674:0;Name=CDY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25989132	25989906	.	-	.	source_transcript=hg002_chrY_paternal_638.4;source_transcript_name=hg002_chrY_paternal_638.1;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_638.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_565.3;transcript_id=HG03009_ch_T0000674;gene_id=HG03009_ch_G0000246;Parent=HG03009_ch_T0000674;transcript_name=hg002_chrY_paternal_638.1;gene_name=CDY1;ID=intron:HG03009_ch_T0000674:0;Name=CDY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25989907	25990106	.	-	.	source_transcript=hg002_chrY_paternal_638.4;source_transcript_name=hg002_chrY_paternal_638.1;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_638.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_565.3;transcript_id=HG03009_ch_T0000674;gene_id=HG03009_ch_G0000246;Parent=HG03009_ch_T0000674;transcript_name=hg002_chrY_paternal_638.1;gene_name=CDY1;ID=exon:HG03009_ch_T0000674:1;Name=CDY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25990107	25990526	.	-	.	source_transcript=hg002_chrY_paternal_638.4;source_transcript_name=hg002_chrY_paternal_638.1;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_638.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_565.3;transcript_id=HG03009_ch_T0000674;gene_id=HG03009_ch_G0000246;Parent=HG03009_ch_T0000674;transcript_name=hg002_chrY_paternal_638.1;gene_name=CDY1;ID=intron:HG03009_ch_T0000674:1;Name=CDY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25990527	25992444	.	-	.	source_transcript=hg002_chrY_paternal_638.4;source_transcript_name=hg002_chrY_paternal_638.1;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_638.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_565.3;transcript_id=HG03009_ch_T0000674;gene_id=HG03009_ch_G0000246;Parent=HG03009_ch_T0000674;transcript_name=hg002_chrY_paternal_638.1;gene_name=CDY1;ID=exon:HG03009_ch_T0000674:2;Name=CDY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	25989659	25992444	100	-	.	source_transcript=hg002_chrY_paternal_638.3;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_565.2;transcript_id=HG03009_ch_T0000675;gene_id=HG03009_ch_G0000246;Parent=HG03009_ch_G0000246;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=HG03009_ch_T0000675;Name=CDY1
HG03009_chrY	CAT	exon	25989659	25990106	.	-	.	source_transcript=hg002_chrY_paternal_638.3;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_565.2;transcript_id=HG03009_ch_T0000675;gene_id=HG03009_ch_G0000246;Parent=HG03009_ch_T0000675;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=exon:HG03009_ch_T0000675:0;Name=CDY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25990034	25990106	.	-	1	source_transcript=hg002_chrY_paternal_638.3;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_565.2;transcript_id=HG03009_ch_T0000675;gene_id=HG03009_ch_G0000246;Parent=HG03009_ch_T0000675;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=CDS:HG03009_ch_T0000675:0;Name=CDY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	25990034	25990036	.	-	0	source_transcript=hg002_chrY_paternal_638.3;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_565.2;transcript_id=HG03009_ch_T0000675;gene_id=HG03009_ch_G0000246;Parent=HG03009_ch_T0000675;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=stop_codon:HG03009_ch_T0000675;Name=CDY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25990107	25990526	.	-	.	source_transcript=hg002_chrY_paternal_638.3;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_565.2;transcript_id=HG03009_ch_T0000675;gene_id=HG03009_ch_G0000246;Parent=HG03009_ch_T0000675;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=intron:HG03009_ch_T0000675:0;Name=CDY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25990527	25992444	.	-	.	source_transcript=hg002_chrY_paternal_638.3;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_565.2;transcript_id=HG03009_ch_T0000675;gene_id=HG03009_ch_G0000246;Parent=HG03009_ch_T0000675;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=exon:HG03009_ch_T0000675:1;Name=CDY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25990527	25992118	.	-	0	source_transcript=hg002_chrY_paternal_638.3;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_565.2;transcript_id=HG03009_ch_T0000675;gene_id=HG03009_ch_G0000246;Parent=HG03009_ch_T0000675;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=CDS:HG03009_ch_T0000675:1;Name=CDY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	25992116	25992118	.	-	0	source_transcript=hg002_chrY_paternal_638.3;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_565.2;transcript_id=HG03009_ch_T0000675;gene_id=HG03009_ch_G0000246;Parent=HG03009_ch_T0000675;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=start_codon:HG03009_ch_T0000675;Name=CDY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	25989659	25992446	100	-	.	source_transcript=hg002_chrY_paternal_638.1;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=HG03009_ch_T0000676;gene_id=HG03009_ch_G0000246;Parent=HG03009_ch_G0000246;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=HG03009_ch_T0000676;Name=CDY1
HG03009_chrY	CAT	exon	25989659	25990106	.	-	.	source_transcript=hg002_chrY_paternal_638.1;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=HG03009_ch_T0000676;gene_id=HG03009_ch_G0000246;Parent=HG03009_ch_T0000676;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=exon:HG03009_ch_T0000676:0;Name=CDY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25990086	25990106	.	-	0	source_transcript=hg002_chrY_paternal_638.1;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=HG03009_ch_T0000676;gene_id=HG03009_ch_G0000246;Parent=HG03009_ch_T0000676;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=CDS:HG03009_ch_T0000676:0;Name=CDY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	25990086	25990088	.	-	0	source_transcript=hg002_chrY_paternal_638.1;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=HG03009_ch_T0000676;gene_id=HG03009_ch_G0000246;Parent=HG03009_ch_T0000676;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=stop_codon:HG03009_ch_T0000676;Name=CDY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	25990107	25990726	.	-	.	source_transcript=hg002_chrY_paternal_638.1;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=HG03009_ch_T0000676;gene_id=HG03009_ch_G0000246;Parent=HG03009_ch_T0000676;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=intron:HG03009_ch_T0000676:0;Name=CDY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	25990727	25992446	.	-	.	source_transcript=hg002_chrY_paternal_638.1;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=HG03009_ch_T0000676;gene_id=HG03009_ch_G0000246;Parent=HG03009_ch_T0000676;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=exon:HG03009_ch_T0000676:1;Name=CDY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25990727	25992118	.	-	0	source_transcript=hg002_chrY_paternal_638.1;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=HG03009_ch_T0000676;gene_id=HG03009_ch_G0000246;Parent=HG03009_ch_T0000676;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=CDS:HG03009_ch_T0000676:1;Name=CDY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	25992116	25992118	.	-	0	source_transcript=hg002_chrY_paternal_638.1;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=HG03009_ch_T0000676;gene_id=HG03009_ch_G0000246;Parent=HG03009_ch_T0000676;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=start_codon:HG03009_ch_T0000676;Name=CDY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	25990223	25992444	100	-	.	source_transcript=hg002_chrY_paternal_638.2;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=HG03009_ch_T0000677;gene_id=HG03009_ch_G0000246;Parent=HG03009_ch_G0000246;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=HG03009_ch_T0000677;Name=CDY1
HG03009_chrY	CAT	exon	25990223	25992444	.	-	.	source_transcript=hg002_chrY_paternal_638.2;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=HG03009_ch_T0000677;gene_id=HG03009_ch_G0000246;Parent=HG03009_ch_T0000677;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=exon:HG03009_ch_T0000677:0;Name=CDY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	25990496	25992118	.	-	0	source_transcript=hg002_chrY_paternal_638.2;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=HG03009_ch_T0000677;gene_id=HG03009_ch_G0000246;Parent=HG03009_ch_T0000677;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=CDS:HG03009_ch_T0000677:0;Name=CDY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	25990496	25990498	.	-	0	source_transcript=hg002_chrY_paternal_638.2;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=HG03009_ch_T0000677;gene_id=HG03009_ch_G0000246;Parent=HG03009_ch_T0000677;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=stop_codon:HG03009_ch_T0000677;Name=CDY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	25992116	25992118	.	-	0	source_transcript=hg002_chrY_paternal_638.2;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=HG03009_ch_T0000677;gene_id=HG03009_ch_G0000246;Parent=HG03009_ch_T0000677;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=start_codon:HG03009_ch_T0000677;Name=CDY1;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	26127865	26131662	.	-	.	source_gene_common_name=CSPG4P1Y;source_gene=hg002_chrY_paternal_556;gene_id=HG03009_ch_G0000247;gene_biotype=transcribed_pseudogene;gene_name=CSPG4P1Y;gene_sources=transMap_pairwise;ID=HG03009_ch_G0000247;Name=CSPG4P1Y
HG03009_chrY	CAT	transcript	26127865	26131662	1000	-	.	source_transcript=hg002_chrY_paternal_556.1;source_transcript_name=hg002_chrY_paternal_556.1;source_gene=hg002_chrY_paternal_556;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_556;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_556.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_556.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P1Y;transcript_id=HG03009_ch_T0000678;gene_id=HG03009_ch_G0000247;Parent=HG03009_ch_G0000247;transcript_name=hg002_chrY_paternal_556.1;gene_name=CSPG4P1Y;ID=HG03009_ch_T0000678;Name=CSPG4P1Y
HG03009_chrY	CAT	exon	26127865	26127936	.	-	.	source_transcript=hg002_chrY_paternal_556.1;source_transcript_name=hg002_chrY_paternal_556.1;source_gene=hg002_chrY_paternal_556;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_556;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_556.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_556.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P1Y;transcript_id=HG03009_ch_T0000678;gene_id=HG03009_ch_G0000247;Parent=HG03009_ch_T0000678;transcript_name=hg002_chrY_paternal_556.1;gene_name=CSPG4P1Y;ID=exon:HG03009_ch_T0000678:0;Name=CSPG4P1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	26127937	26130939	.	-	.	source_transcript=hg002_chrY_paternal_556.1;source_transcript_name=hg002_chrY_paternal_556.1;source_gene=hg002_chrY_paternal_556;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_556;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_556.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_556.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P1Y;transcript_id=HG03009_ch_T0000678;gene_id=HG03009_ch_G0000247;Parent=HG03009_ch_T0000678;transcript_name=hg002_chrY_paternal_556.1;gene_name=CSPG4P1Y;ID=intron:HG03009_ch_T0000678:0;Name=CSPG4P1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	26130940	26131662	.	-	.	source_transcript=hg002_chrY_paternal_556.1;source_transcript_name=hg002_chrY_paternal_556.1;source_gene=hg002_chrY_paternal_556;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_556;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_556.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_556.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P1Y;transcript_id=HG03009_ch_T0000678;gene_id=HG03009_ch_G0000247;Parent=HG03009_ch_T0000678;transcript_name=hg002_chrY_paternal_556.1;gene_name=CSPG4P1Y;ID=exon:HG03009_ch_T0000678:1;Name=CSPG4P1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	26150873	26152403	.	+	.	source_gene_common_name=LOC102724034;source_gene=hg002_chrY_paternal_626;alternative_source_transcripts=hg002_chrY_paternal_552.1;gene_id=HG03009_ch_G0000248;gene_biotype=lncRNA;gene_name=LOC102724034;gene_sources=liftoff;ID=HG03009_ch_G0000248;Name=LOC102724034
HG03009_chrY	CAT	transcript	26150873	26152403	1000	+	.	source_transcript=hg002_chrY_paternal_626.1;source_transcript_name=hg002_chrY_paternal_626.1;source_gene=hg002_chrY_paternal_626;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_626;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_626.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_626.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724034;alternative_source_transcripts=hg002_chrY_paternal_552.1;transcript_id=HG03009_ch_T0000679;gene_id=HG03009_ch_G0000248;Parent=HG03009_ch_G0000248;transcript_name=hg002_chrY_paternal_626.1;gene_name=LOC102724034;ID=HG03009_ch_T0000679;Name=LOC102724034
HG03009_chrY	CAT	exon	26150873	26150898	.	+	.	source_transcript=hg002_chrY_paternal_626.1;source_transcript_name=hg002_chrY_paternal_626.1;source_gene=hg002_chrY_paternal_626;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_626;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_626.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_626.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724034;alternative_source_transcripts=hg002_chrY_paternal_552.1;transcript_id=HG03009_ch_T0000679;gene_id=HG03009_ch_G0000248;Parent=HG03009_ch_T0000679;transcript_name=hg002_chrY_paternal_626.1;gene_name=LOC102724034;ID=exon:HG03009_ch_T0000679:0;Name=LOC102724034;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	26150899	26151586	.	+	.	source_transcript=hg002_chrY_paternal_626.1;source_transcript_name=hg002_chrY_paternal_626.1;source_gene=hg002_chrY_paternal_626;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_626;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_626.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_626.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724034;alternative_source_transcripts=hg002_chrY_paternal_552.1;transcript_id=HG03009_ch_T0000679;gene_id=HG03009_ch_G0000248;Parent=HG03009_ch_T0000679;transcript_name=hg002_chrY_paternal_626.1;gene_name=LOC102724034;ID=intron:HG03009_ch_T0000679:0;Name=LOC102724034;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	26151587	26151711	.	+	.	source_transcript=hg002_chrY_paternal_626.1;source_transcript_name=hg002_chrY_paternal_626.1;source_gene=hg002_chrY_paternal_626;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_626;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_626.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_626.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724034;alternative_source_transcripts=hg002_chrY_paternal_552.1;transcript_id=HG03009_ch_T0000679;gene_id=HG03009_ch_G0000248;Parent=HG03009_ch_T0000679;transcript_name=hg002_chrY_paternal_626.1;gene_name=LOC102724034;ID=exon:HG03009_ch_T0000679:1;Name=LOC102724034;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	26151712	26151979	.	+	.	source_transcript=hg002_chrY_paternal_626.1;source_transcript_name=hg002_chrY_paternal_626.1;source_gene=hg002_chrY_paternal_626;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_626;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_626.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_626.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724034;alternative_source_transcripts=hg002_chrY_paternal_552.1;transcript_id=HG03009_ch_T0000679;gene_id=HG03009_ch_G0000248;Parent=HG03009_ch_T0000679;transcript_name=hg002_chrY_paternal_626.1;gene_name=LOC102724034;ID=intron:HG03009_ch_T0000679:1;Name=LOC102724034;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	26151980	26152403	.	+	.	source_transcript=hg002_chrY_paternal_626.1;source_transcript_name=hg002_chrY_paternal_626.1;source_gene=hg002_chrY_paternal_626;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_626;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_626.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_626.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724034;alternative_source_transcripts=hg002_chrY_paternal_552.1;transcript_id=HG03009_ch_T0000679;gene_id=HG03009_ch_G0000248;Parent=HG03009_ch_T0000679;transcript_name=hg002_chrY_paternal_626.1;gene_name=LOC102724034;ID=exon:HG03009_ch_T0000679:2;Name=LOC102724034;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	26154402	26159266	.	-	.	source_gene_common_name=GOLGA2P3Y;source_gene=hg002_chrY_paternal_624;alternative_source_transcripts=hg002_chrY_paternal_550.1;gene_id=HG03009_ch_G0000249;gene_biotype=transcribed_pseudogene;gene_name=GOLGA2P3Y;gene_sources=liftoff;ID=HG03009_ch_G0000249;Name=GOLGA2P3Y
HG03009_chrY	CAT	transcript	26154402	26159266	1000	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=HG03009_ch_T0000680;gene_id=HG03009_ch_G0000249;Parent=HG03009_ch_G0000249;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=HG03009_ch_T0000680;Name=GOLGA2P3Y
HG03009_chrY	CAT	exon	26154402	26154485	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=HG03009_ch_T0000680;gene_id=HG03009_ch_G0000249;Parent=HG03009_ch_T0000680;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=exon:HG03009_ch_T0000680:0;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	26154486	26154567	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=HG03009_ch_T0000680;gene_id=HG03009_ch_G0000249;Parent=HG03009_ch_T0000680;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=intron:HG03009_ch_T0000680:0;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	26154568	26154660	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=HG03009_ch_T0000680;gene_id=HG03009_ch_G0000249;Parent=HG03009_ch_T0000680;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=exon:HG03009_ch_T0000680:1;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	26154661	26154749	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=HG03009_ch_T0000680;gene_id=HG03009_ch_G0000249;Parent=HG03009_ch_T0000680;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=intron:HG03009_ch_T0000680:1;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	26154750	26154938	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=HG03009_ch_T0000680;gene_id=HG03009_ch_G0000249;Parent=HG03009_ch_T0000680;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=exon:HG03009_ch_T0000680:2;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	26154939	26155193	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=HG03009_ch_T0000680;gene_id=HG03009_ch_G0000249;Parent=HG03009_ch_T0000680;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=intron:HG03009_ch_T0000680:2;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	26155194	26155282	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=HG03009_ch_T0000680;gene_id=HG03009_ch_G0000249;Parent=HG03009_ch_T0000680;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=exon:HG03009_ch_T0000680:3;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	26155283	26155702	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=HG03009_ch_T0000680;gene_id=HG03009_ch_G0000249;Parent=HG03009_ch_T0000680;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=intron:HG03009_ch_T0000680:3;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	26155703	26155777	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=HG03009_ch_T0000680;gene_id=HG03009_ch_G0000249;Parent=HG03009_ch_T0000680;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=exon:HG03009_ch_T0000680:4;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	26155778	26157133	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=HG03009_ch_T0000680;gene_id=HG03009_ch_G0000249;Parent=HG03009_ch_T0000680;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=intron:HG03009_ch_T0000680:4;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	26157134	26157191	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=HG03009_ch_T0000680;gene_id=HG03009_ch_G0000249;Parent=HG03009_ch_T0000680;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=exon:HG03009_ch_T0000680:5;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	26157192	26157487	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=HG03009_ch_T0000680;gene_id=HG03009_ch_G0000249;Parent=HG03009_ch_T0000680;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=intron:HG03009_ch_T0000680:5;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	26157488	26157839	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=HG03009_ch_T0000680;gene_id=HG03009_ch_G0000249;Parent=HG03009_ch_T0000680;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=exon:HG03009_ch_T0000680:6;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	26157840	26158958	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=HG03009_ch_T0000680;gene_id=HG03009_ch_G0000249;Parent=HG03009_ch_T0000680;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=intron:HG03009_ch_T0000680:6;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	26158959	26159037	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=HG03009_ch_T0000680;gene_id=HG03009_ch_G0000249;Parent=HG03009_ch_T0000680;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=exon:HG03009_ch_T0000680:7;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	26159038	26159223	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=HG03009_ch_T0000680;gene_id=HG03009_ch_G0000249;Parent=HG03009_ch_T0000680;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=intron:HG03009_ch_T0000680:7;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	26159224	26159266	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=HG03009_ch_T0000680;gene_id=HG03009_ch_G0000249;Parent=HG03009_ch_T0000680;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=exon:HG03009_ch_T0000680:8;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	26255138	26266139	.	-	.	source_gene_common_name=LOC107987240;source_gene=hg002_chrY_paternal_542;alternative_source_transcripts=hg002_chrY_paternal_542.1;gene_id=HG03009_ch_G0000250;gene_biotype=lncRNA;gene_name=LOC107987240;gene_sources=liftoff;ID=HG03009_ch_G0000250;Name=LOC107987240
HG03009_chrY	CAT	transcript	26255138	26266139	1000	-	.	source_transcript=hg002_chrY_paternal_542.1;source_transcript_name=hg002_chrY_paternal_542.1;source_gene=hg002_chrY_paternal_542;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_542;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_542.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_542.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987240;alternative_source_transcripts=hg002_chrY_paternal_542.1;transcript_id=HG03009_ch_T0000681;gene_id=HG03009_ch_G0000250;Parent=HG03009_ch_G0000250;transcript_name=hg002_chrY_paternal_542.1;gene_name=LOC107987240;ID=HG03009_ch_T0000681;Name=LOC107987240
HG03009_chrY	CAT	exon	26255138	26255795	.	-	.	source_transcript=hg002_chrY_paternal_542.1;source_transcript_name=hg002_chrY_paternal_542.1;source_gene=hg002_chrY_paternal_542;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_542;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_542.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_542.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987240;alternative_source_transcripts=hg002_chrY_paternal_542.1;transcript_id=HG03009_ch_T0000681;gene_id=HG03009_ch_G0000250;Parent=HG03009_ch_T0000681;transcript_name=hg002_chrY_paternal_542.1;gene_name=LOC107987240;ID=exon:HG03009_ch_T0000681:0;Name=LOC107987240;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	26255796	26256004	.	-	.	source_transcript=hg002_chrY_paternal_542.1;source_transcript_name=hg002_chrY_paternal_542.1;source_gene=hg002_chrY_paternal_542;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_542;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_542.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_542.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987240;alternative_source_transcripts=hg002_chrY_paternal_542.1;transcript_id=HG03009_ch_T0000681;gene_id=HG03009_ch_G0000250;Parent=HG03009_ch_T0000681;transcript_name=hg002_chrY_paternal_542.1;gene_name=LOC107987240;ID=intron:HG03009_ch_T0000681:0;Name=LOC107987240;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	26256005	26256111	.	-	.	source_transcript=hg002_chrY_paternal_542.1;source_transcript_name=hg002_chrY_paternal_542.1;source_gene=hg002_chrY_paternal_542;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_542;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_542.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_542.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987240;alternative_source_transcripts=hg002_chrY_paternal_542.1;transcript_id=HG03009_ch_T0000681;gene_id=HG03009_ch_G0000250;Parent=HG03009_ch_T0000681;transcript_name=hg002_chrY_paternal_542.1;gene_name=LOC107987240;ID=exon:HG03009_ch_T0000681:1;Name=LOC107987240;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	26256112	26265907	.	-	.	source_transcript=hg002_chrY_paternal_542.1;source_transcript_name=hg002_chrY_paternal_542.1;source_gene=hg002_chrY_paternal_542;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_542;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_542.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_542.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987240;alternative_source_transcripts=hg002_chrY_paternal_542.1;transcript_id=HG03009_ch_T0000681;gene_id=HG03009_ch_G0000250;Parent=HG03009_ch_T0000681;transcript_name=hg002_chrY_paternal_542.1;gene_name=LOC107987240;ID=intron:HG03009_ch_T0000681:1;Name=LOC107987240;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	26265908	26266139	.	-	.	source_transcript=hg002_chrY_paternal_542.1;source_transcript_name=hg002_chrY_paternal_542.1;source_gene=hg002_chrY_paternal_542;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_542;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_542.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_542.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987240;alternative_source_transcripts=hg002_chrY_paternal_542.1;transcript_id=HG03009_ch_T0000681;gene_id=HG03009_ch_G0000250;Parent=HG03009_ch_T0000681;transcript_name=hg002_chrY_paternal_542.1;gene_name=LOC107987240;ID=exon:HG03009_ch_T0000681:2;Name=LOC107987240;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	26274019	26275652	.	+	.	source_gene_common_name=LOC101928626;source_gene=hg002_chrY_paternal_541;alternative_source_transcripts=hg002_chrY_paternal_541.1;gene_id=HG03009_ch_G0000251;gene_biotype=lncRNA;gene_name=LOC101928626;gene_sources=liftoff;ID=HG03009_ch_G0000251;Name=LOC101928626
HG03009_chrY	CAT	transcript	26274019	26275652	1000	+	.	source_transcript=hg002_chrY_paternal_541.1;source_transcript_name=hg002_chrY_paternal_541.1;source_gene=hg002_chrY_paternal_541;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_541;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_541.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_541.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928626;alternative_source_transcripts=hg002_chrY_paternal_541.1;transcript_id=HG03009_ch_T0000682;gene_id=HG03009_ch_G0000251;Parent=HG03009_ch_G0000251;transcript_name=hg002_chrY_paternal_541.1;gene_name=LOC101928626;ID=HG03009_ch_T0000682;Name=LOC101928626
HG03009_chrY	CAT	exon	26274019	26274109	.	+	.	source_transcript=hg002_chrY_paternal_541.1;source_transcript_name=hg002_chrY_paternal_541.1;source_gene=hg002_chrY_paternal_541;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_541;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_541.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_541.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928626;alternative_source_transcripts=hg002_chrY_paternal_541.1;transcript_id=HG03009_ch_T0000682;gene_id=HG03009_ch_G0000251;Parent=HG03009_ch_T0000682;transcript_name=hg002_chrY_paternal_541.1;gene_name=LOC101928626;ID=exon:HG03009_ch_T0000682:0;Name=LOC101928626;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	26274110	26274804	.	+	.	source_transcript=hg002_chrY_paternal_541.1;source_transcript_name=hg002_chrY_paternal_541.1;source_gene=hg002_chrY_paternal_541;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_541;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_541.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_541.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928626;alternative_source_transcripts=hg002_chrY_paternal_541.1;transcript_id=HG03009_ch_T0000682;gene_id=HG03009_ch_G0000251;Parent=HG03009_ch_T0000682;transcript_name=hg002_chrY_paternal_541.1;gene_name=LOC101928626;ID=intron:HG03009_ch_T0000682:0;Name=LOC101928626;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	26274805	26275071	.	+	.	source_transcript=hg002_chrY_paternal_541.1;source_transcript_name=hg002_chrY_paternal_541.1;source_gene=hg002_chrY_paternal_541;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_541;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_541.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_541.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928626;alternative_source_transcripts=hg002_chrY_paternal_541.1;transcript_id=HG03009_ch_T0000682;gene_id=HG03009_ch_G0000251;Parent=HG03009_ch_T0000682;transcript_name=hg002_chrY_paternal_541.1;gene_name=LOC101928626;ID=exon:HG03009_ch_T0000682:1;Name=LOC101928626;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	26275072	26275208	.	+	.	source_transcript=hg002_chrY_paternal_541.1;source_transcript_name=hg002_chrY_paternal_541.1;source_gene=hg002_chrY_paternal_541;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_541;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_541.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_541.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928626;alternative_source_transcripts=hg002_chrY_paternal_541.1;transcript_id=HG03009_ch_T0000682;gene_id=HG03009_ch_G0000251;Parent=HG03009_ch_T0000682;transcript_name=hg002_chrY_paternal_541.1;gene_name=LOC101928626;ID=intron:HG03009_ch_T0000682:1;Name=LOC101928626;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	26275209	26275652	.	+	.	source_transcript=hg002_chrY_paternal_541.1;source_transcript_name=hg002_chrY_paternal_541.1;source_gene=hg002_chrY_paternal_541;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_541;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_541.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_541.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928626;alternative_source_transcripts=hg002_chrY_paternal_541.1;transcript_id=HG03009_ch_T0000682;gene_id=HG03009_ch_G0000251;Parent=HG03009_ch_T0000682;transcript_name=hg002_chrY_paternal_541.1;gene_name=LOC101928626;ID=exon:HG03009_ch_T0000682:2;Name=LOC101928626;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	26364422	26377527	.	+	.	source_gene_common_name=LOC107987350;source_gene=hg002_chrY_paternal_538;alternative_source_transcripts=hg002_chrY_paternal_538.1;gene_id=HG03009_ch_G0000252;gene_biotype=lncRNA;gene_name=LOC107987350;gene_sources=liftoff;ID=HG03009_ch_G0000252;Name=LOC107987350
HG03009_chrY	CAT	transcript	26364422	26377527	1000	+	.	source_transcript=hg002_chrY_paternal_538.1;source_transcript_name=hg002_chrY_paternal_538.1;source_gene=hg002_chrY_paternal_538;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_538;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_538.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_538.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_538.1;transcript_id=HG03009_ch_T0000683;gene_id=HG03009_ch_G0000252;Parent=HG03009_ch_G0000252;transcript_name=hg002_chrY_paternal_538.1;gene_name=LOC107987350;ID=HG03009_ch_T0000683;Name=LOC107987350
HG03009_chrY	CAT	exon	26364422	26364877	.	+	.	source_transcript=hg002_chrY_paternal_538.1;source_transcript_name=hg002_chrY_paternal_538.1;source_gene=hg002_chrY_paternal_538;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_538;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_538.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_538.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_538.1;transcript_id=HG03009_ch_T0000683;gene_id=HG03009_ch_G0000252;Parent=HG03009_ch_T0000683;transcript_name=hg002_chrY_paternal_538.1;gene_name=LOC107987350;ID=exon:HG03009_ch_T0000683:0;Name=LOC107987350;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	26364878	26370847	.	+	.	source_transcript=hg002_chrY_paternal_538.1;source_transcript_name=hg002_chrY_paternal_538.1;source_gene=hg002_chrY_paternal_538;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_538;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_538.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_538.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_538.1;transcript_id=HG03009_ch_T0000683;gene_id=HG03009_ch_G0000252;Parent=HG03009_ch_T0000683;transcript_name=hg002_chrY_paternal_538.1;gene_name=LOC107987350;ID=intron:HG03009_ch_T0000683:0;Name=LOC107987350;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	26370848	26373012	.	+	.	source_transcript=hg002_chrY_paternal_538.1;source_transcript_name=hg002_chrY_paternal_538.1;source_gene=hg002_chrY_paternal_538;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_538;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_538.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_538.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_538.1;transcript_id=HG03009_ch_T0000683;gene_id=HG03009_ch_G0000252;Parent=HG03009_ch_T0000683;transcript_name=hg002_chrY_paternal_538.1;gene_name=LOC107987350;ID=exon:HG03009_ch_T0000683:1;Name=LOC107987350;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	26373013	26373653	.	+	.	source_transcript=hg002_chrY_paternal_538.1;source_transcript_name=hg002_chrY_paternal_538.1;source_gene=hg002_chrY_paternal_538;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_538;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_538.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_538.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_538.1;transcript_id=HG03009_ch_T0000683;gene_id=HG03009_ch_G0000252;Parent=HG03009_ch_T0000683;transcript_name=hg002_chrY_paternal_538.1;gene_name=LOC107987350;ID=intron:HG03009_ch_T0000683:1;Name=LOC107987350;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	26373654	26377527	.	+	.	source_transcript=hg002_chrY_paternal_538.1;source_transcript_name=hg002_chrY_paternal_538.1;source_gene=hg002_chrY_paternal_538;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_538;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_538.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_538.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_538.1;transcript_id=HG03009_ch_T0000683;gene_id=HG03009_ch_G0000252;Parent=HG03009_ch_T0000683;transcript_name=hg002_chrY_paternal_538.1;gene_name=LOC107987350;ID=exon:HG03009_ch_T0000683:2;Name=LOC107987350;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	26364422	26377527	1000	+	.	source_transcript=hg002_chrY_paternal_538.2;source_transcript_name=hg002_chrY_paternal_538.1;source_gene=hg002_chrY_paternal_538;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_538;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_538.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_538.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_538.2;transcript_id=HG03009_ch_T0000684;gene_id=HG03009_ch_G0000252;Parent=HG03009_ch_G0000252;transcript_name=hg002_chrY_paternal_538.1;gene_name=LOC107987350;ID=HG03009_ch_T0000684;Name=LOC107987350
HG03009_chrY	CAT	exon	26364422	26364877	.	+	.	source_transcript=hg002_chrY_paternal_538.2;source_transcript_name=hg002_chrY_paternal_538.1;source_gene=hg002_chrY_paternal_538;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_538;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_538.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_538.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_538.2;transcript_id=HG03009_ch_T0000684;gene_id=HG03009_ch_G0000252;Parent=HG03009_ch_T0000684;transcript_name=hg002_chrY_paternal_538.1;gene_name=LOC107987350;ID=exon:HG03009_ch_T0000684:0;Name=LOC107987350;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	26364878	26370379	.	+	.	source_transcript=hg002_chrY_paternal_538.2;source_transcript_name=hg002_chrY_paternal_538.1;source_gene=hg002_chrY_paternal_538;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_538;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_538.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_538.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_538.2;transcript_id=HG03009_ch_T0000684;gene_id=HG03009_ch_G0000252;Parent=HG03009_ch_T0000684;transcript_name=hg002_chrY_paternal_538.1;gene_name=LOC107987350;ID=intron:HG03009_ch_T0000684:0;Name=LOC107987350;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	26370380	26373012	.	+	.	source_transcript=hg002_chrY_paternal_538.2;source_transcript_name=hg002_chrY_paternal_538.1;source_gene=hg002_chrY_paternal_538;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_538;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_538.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_538.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_538.2;transcript_id=HG03009_ch_T0000684;gene_id=HG03009_ch_G0000252;Parent=HG03009_ch_T0000684;transcript_name=hg002_chrY_paternal_538.1;gene_name=LOC107987350;ID=exon:HG03009_ch_T0000684:1;Name=LOC107987350;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	26373013	26373653	.	+	.	source_transcript=hg002_chrY_paternal_538.2;source_transcript_name=hg002_chrY_paternal_538.1;source_gene=hg002_chrY_paternal_538;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_538;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_538.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_538.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_538.2;transcript_id=HG03009_ch_T0000684;gene_id=HG03009_ch_G0000252;Parent=HG03009_ch_T0000684;transcript_name=hg002_chrY_paternal_538.1;gene_name=LOC107987350;ID=intron:HG03009_ch_T0000684:1;Name=LOC107987350;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	26373654	26377527	.	+	.	source_transcript=hg002_chrY_paternal_538.2;source_transcript_name=hg002_chrY_paternal_538.1;source_gene=hg002_chrY_paternal_538;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_538;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_538.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_538.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_538.2;transcript_id=HG03009_ch_T0000684;gene_id=HG03009_ch_G0000252;Parent=HG03009_ch_T0000684;transcript_name=hg002_chrY_paternal_538.1;gene_name=LOC107987350;ID=exon:HG03009_ch_T0000684:2;Name=LOC107987350;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	26429793	26430924	.	+	.	source_gene_common_name=TTTY17C;source_gene=hg002_chrY_paternal_537;alternative_source_transcripts=hg002_chrY_paternal_537.1;gene_id=HG03009_ch_G0000253;gene_biotype=lncRNA;gene_name=TTTY17C;gene_sources=liftoff;ID=HG03009_ch_G0000253;Name=TTTY17C
HG03009_chrY	CAT	transcript	26429793	26430924	1000	+	.	source_transcript=hg002_chrY_paternal_537.1;source_transcript_name=hg002_chrY_paternal_537.1;source_gene=hg002_chrY_paternal_537;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_537;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_537.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_537.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;alternative_source_transcripts=hg002_chrY_paternal_537.1;transcript_id=HG03009_ch_T0000685;gene_id=HG03009_ch_G0000253;Parent=HG03009_ch_G0000253;transcript_name=hg002_chrY_paternal_537.1;gene_name=TTTY17C;ID=HG03009_ch_T0000685;Name=TTTY17C
HG03009_chrY	CAT	exon	26429793	26429852	.	+	.	source_transcript=hg002_chrY_paternal_537.1;source_transcript_name=hg002_chrY_paternal_537.1;source_gene=hg002_chrY_paternal_537;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_537;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_537.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_537.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;alternative_source_transcripts=hg002_chrY_paternal_537.1;transcript_id=HG03009_ch_T0000685;gene_id=HG03009_ch_G0000253;Parent=HG03009_ch_T0000685;transcript_name=hg002_chrY_paternal_537.1;gene_name=TTTY17C;ID=exon:HG03009_ch_T0000685:0;Name=TTTY17C;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	26429853	26430818	.	+	.	source_transcript=hg002_chrY_paternal_537.1;source_transcript_name=hg002_chrY_paternal_537.1;source_gene=hg002_chrY_paternal_537;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_537;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_537.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_537.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;alternative_source_transcripts=hg002_chrY_paternal_537.1;transcript_id=HG03009_ch_T0000685;gene_id=HG03009_ch_G0000253;Parent=HG03009_ch_T0000685;transcript_name=hg002_chrY_paternal_537.1;gene_name=TTTY17C;ID=intron:HG03009_ch_T0000685:0;Name=TTTY17C;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	26430819	26430924	.	+	.	source_transcript=hg002_chrY_paternal_537.1;source_transcript_name=hg002_chrY_paternal_537.1;source_gene=hg002_chrY_paternal_537;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_537;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_537.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_537.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;alternative_source_transcripts=hg002_chrY_paternal_537.1;transcript_id=HG03009_ch_T0000685;gene_id=HG03009_ch_G0000253;Parent=HG03009_ch_T0000685;transcript_name=hg002_chrY_paternal_537.1;gene_name=TTTY17C;ID=exon:HG03009_ch_T0000685:1;Name=TTTY17C;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	26514666	26551496	.	+	.	source_gene_common_name=TTTY4B;source_gene=hg002_chrY_paternal_608;alternative_source_transcripts=hg002_chrY_paternal_534.1;gene_id=HG03009_ch_G0000254;gene_biotype=lncRNA;gene_name=TTTY4B;gene_sources=liftoff;ID=HG03009_ch_G0000254;Name=TTTY4B
HG03009_chrY	CAT	transcript	26514666	26551496	1000	+	.	source_transcript=hg002_chrY_paternal_608.1;source_transcript_name=hg002_chrY_paternal_608.1;source_gene=hg002_chrY_paternal_608;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_608;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_608.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_608.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4B;alternative_source_transcripts=hg002_chrY_paternal_534.1;transcript_id=HG03009_ch_T0000686;gene_id=HG03009_ch_G0000254;Parent=HG03009_ch_G0000254;transcript_name=hg002_chrY_paternal_608.1;gene_name=TTTY4B;ID=HG03009_ch_T0000686;Name=TTTY4B
HG03009_chrY	CAT	exon	26514666	26514826	.	+	.	source_transcript=hg002_chrY_paternal_608.1;source_transcript_name=hg002_chrY_paternal_608.1;source_gene=hg002_chrY_paternal_608;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_608;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_608.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_608.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4B;alternative_source_transcripts=hg002_chrY_paternal_534.1;transcript_id=HG03009_ch_T0000686;gene_id=HG03009_ch_G0000254;Parent=HG03009_ch_T0000686;transcript_name=hg002_chrY_paternal_608.1;gene_name=TTTY4B;ID=exon:HG03009_ch_T0000686:0;Name=TTTY4B;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	26514827	26541839	.	+	.	source_transcript=hg002_chrY_paternal_608.1;source_transcript_name=hg002_chrY_paternal_608.1;source_gene=hg002_chrY_paternal_608;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_608;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_608.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_608.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4B;alternative_source_transcripts=hg002_chrY_paternal_534.1;transcript_id=HG03009_ch_T0000686;gene_id=HG03009_ch_G0000254;Parent=HG03009_ch_T0000686;transcript_name=hg002_chrY_paternal_608.1;gene_name=TTTY4B;ID=intron:HG03009_ch_T0000686:0;Name=TTTY4B;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	26541840	26541915	.	+	.	source_transcript=hg002_chrY_paternal_608.1;source_transcript_name=hg002_chrY_paternal_608.1;source_gene=hg002_chrY_paternal_608;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_608;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_608.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_608.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4B;alternative_source_transcripts=hg002_chrY_paternal_534.1;transcript_id=HG03009_ch_T0000686;gene_id=HG03009_ch_G0000254;Parent=HG03009_ch_T0000686;transcript_name=hg002_chrY_paternal_608.1;gene_name=TTTY4B;ID=exon:HG03009_ch_T0000686:1;Name=TTTY4B;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	26541916	26543719	.	+	.	source_transcript=hg002_chrY_paternal_608.1;source_transcript_name=hg002_chrY_paternal_608.1;source_gene=hg002_chrY_paternal_608;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_608;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_608.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_608.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4B;alternative_source_transcripts=hg002_chrY_paternal_534.1;transcript_id=HG03009_ch_T0000686;gene_id=HG03009_ch_G0000254;Parent=HG03009_ch_T0000686;transcript_name=hg002_chrY_paternal_608.1;gene_name=TTTY4B;ID=intron:HG03009_ch_T0000686:1;Name=TTTY4B;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	26543720	26543827	.	+	.	source_transcript=hg002_chrY_paternal_608.1;source_transcript_name=hg002_chrY_paternal_608.1;source_gene=hg002_chrY_paternal_608;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_608;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_608.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_608.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4B;alternative_source_transcripts=hg002_chrY_paternal_534.1;transcript_id=HG03009_ch_T0000686;gene_id=HG03009_ch_G0000254;Parent=HG03009_ch_T0000686;transcript_name=hg002_chrY_paternal_608.1;gene_name=TTTY4B;ID=exon:HG03009_ch_T0000686:2;Name=TTTY4B;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	26543828	26550495	.	+	.	source_transcript=hg002_chrY_paternal_608.1;source_transcript_name=hg002_chrY_paternal_608.1;source_gene=hg002_chrY_paternal_608;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_608;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_608.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_608.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4B;alternative_source_transcripts=hg002_chrY_paternal_534.1;transcript_id=HG03009_ch_T0000686;gene_id=HG03009_ch_G0000254;Parent=HG03009_ch_T0000686;transcript_name=hg002_chrY_paternal_608.1;gene_name=TTTY4B;ID=intron:HG03009_ch_T0000686:2;Name=TTTY4B;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	26550496	26551496	.	+	.	source_transcript=hg002_chrY_paternal_608.1;source_transcript_name=hg002_chrY_paternal_608.1;source_gene=hg002_chrY_paternal_608;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_608;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_608.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_608.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4B;alternative_source_transcripts=hg002_chrY_paternal_534.1;transcript_id=HG03009_ch_T0000686;gene_id=HG03009_ch_G0000254;Parent=HG03009_ch_T0000686;transcript_name=hg002_chrY_paternal_608.1;gene_name=TTTY4B;ID=exon:HG03009_ch_T0000686:3;Name=TTTY4B;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	26562475	26583678	.	+	.	source_gene_common_name=BPY2;source_gene=hg002_chrY_paternal_607;alternative_source_transcripts=hg002_chrY_paternal_533.1;gene_id=HG03009_ch_G0000255;gene_biotype=protein_coding;gene_name=BPY2;gene_sources=liftoff;ID=HG03009_ch_G0000255;Name=BPY2
HG03009_chrY	CAT	transcript	26562475	26583678	10000	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG03009_ch_T0000687;gene_id=HG03009_ch_G0000255;Parent=HG03009_ch_G0000255;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=HG03009_ch_T0000687;Name=BPY2
HG03009_chrY	CAT	exon	26562475	26562505	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG03009_ch_T0000687;gene_id=HG03009_ch_G0000255;Parent=HG03009_ch_T0000687;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=exon:HG03009_ch_T0000687:0;Name=BPY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	26562506	26562780	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG03009_ch_T0000687;gene_id=HG03009_ch_G0000255;Parent=HG03009_ch_T0000687;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=intron:HG03009_ch_T0000687:0;Name=BPY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	26562781	26562903	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG03009_ch_T0000687;gene_id=HG03009_ch_G0000255;Parent=HG03009_ch_T0000687;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=exon:HG03009_ch_T0000687:1;Name=BPY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	26562904	26565968	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG03009_ch_T0000687;gene_id=HG03009_ch_G0000255;Parent=HG03009_ch_T0000687;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=intron:HG03009_ch_T0000687:1;Name=BPY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	26565969	26566105	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG03009_ch_T0000687;gene_id=HG03009_ch_G0000255;Parent=HG03009_ch_T0000687;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=exon:HG03009_ch_T0000687:2;Name=BPY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	26566106	26570514	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG03009_ch_T0000687;gene_id=HG03009_ch_G0000255;Parent=HG03009_ch_T0000687;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=intron:HG03009_ch_T0000687:2;Name=BPY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	26570515	26570633	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG03009_ch_T0000687;gene_id=HG03009_ch_G0000255;Parent=HG03009_ch_T0000687;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=exon:HG03009_ch_T0000687:3;Name=BPY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	26570556	26570633	.	+	0	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG03009_ch_T0000687;gene_id=HG03009_ch_G0000255;Parent=HG03009_ch_T0000687;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=CDS:HG03009_ch_T0000687:0;Name=BPY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	26570556	26570558	.	+	0	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG03009_ch_T0000687;gene_id=HG03009_ch_G0000255;Parent=HG03009_ch_T0000687;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=start_codon:HG03009_ch_T0000687;Name=BPY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	26570634	26572692	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG03009_ch_T0000687;gene_id=HG03009_ch_G0000255;Parent=HG03009_ch_T0000687;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=intron:HG03009_ch_T0000687:3;Name=BPY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	26572693	26572810	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG03009_ch_T0000687;gene_id=HG03009_ch_G0000255;Parent=HG03009_ch_T0000687;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=exon:HG03009_ch_T0000687:4;Name=BPY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	26572693	26572810	.	+	0	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG03009_ch_T0000687;gene_id=HG03009_ch_G0000255;Parent=HG03009_ch_T0000687;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=CDS:HG03009_ch_T0000687:1;Name=BPY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	26572811	26575664	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG03009_ch_T0000687;gene_id=HG03009_ch_G0000255;Parent=HG03009_ch_T0000687;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=intron:HG03009_ch_T0000687:4;Name=BPY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	26575665	26575770	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG03009_ch_T0000687;gene_id=HG03009_ch_G0000255;Parent=HG03009_ch_T0000687;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=exon:HG03009_ch_T0000687:5;Name=BPY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	26575665	26575770	.	+	2	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG03009_ch_T0000687;gene_id=HG03009_ch_G0000255;Parent=HG03009_ch_T0000687;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=CDS:HG03009_ch_T0000687:2;Name=BPY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	26575771	26576462	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG03009_ch_T0000687;gene_id=HG03009_ch_G0000255;Parent=HG03009_ch_T0000687;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=intron:HG03009_ch_T0000687:5;Name=BPY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	26576463	26576587	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG03009_ch_T0000687;gene_id=HG03009_ch_G0000255;Parent=HG03009_ch_T0000687;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=exon:HG03009_ch_T0000687:6;Name=BPY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	26576463	26576481	.	+	1	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG03009_ch_T0000687;gene_id=HG03009_ch_G0000255;Parent=HG03009_ch_T0000687;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=CDS:HG03009_ch_T0000687:3;Name=BPY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	26576479	26576481	.	+	0	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG03009_ch_T0000687;gene_id=HG03009_ch_G0000255;Parent=HG03009_ch_T0000687;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=stop_codon:HG03009_ch_T0000687;Name=BPY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	26576588	26583137	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG03009_ch_T0000687;gene_id=HG03009_ch_G0000255;Parent=HG03009_ch_T0000687;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=intron:HG03009_ch_T0000687:6;Name=BPY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	26583138	26583262	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG03009_ch_T0000687;gene_id=HG03009_ch_G0000255;Parent=HG03009_ch_T0000687;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=exon:HG03009_ch_T0000687:7;Name=BPY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	26583263	26583356	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG03009_ch_T0000687;gene_id=HG03009_ch_G0000255;Parent=HG03009_ch_T0000687;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=intron:HG03009_ch_T0000687:7;Name=BPY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	26583357	26583678	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG03009_ch_T0000687;gene_id=HG03009_ch_G0000255;Parent=HG03009_ch_T0000687;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=exon:HG03009_ch_T0000687:8;Name=BPY2;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	26684549	26687886	.	-	.	source_gene_common_name=LOC105377242;source_gene=hg002_chrY_paternal_528;gene_id=HG03009_ch_G0000256;gene_biotype=lncRNA;gene_name=LOC105377242;gene_sources=liftoff;ID=HG03009_ch_G0000256;Name=LOC105377242
HG03009_chrY	CAT	transcript	26684549	26687886	1000	-	.	source_transcript=hg002_chrY_paternal_528.1;source_transcript_name=hg002_chrY_paternal_528.1;source_gene=hg002_chrY_paternal_528;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_528;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_528.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_528.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377242;transcript_id=HG03009_ch_T0000688;gene_id=HG03009_ch_G0000256;Parent=HG03009_ch_G0000256;transcript_name=hg002_chrY_paternal_528.1;gene_name=LOC105377242;ID=HG03009_ch_T0000688;Name=LOC105377242
HG03009_chrY	CAT	exon	26684549	26684649	.	-	.	source_transcript=hg002_chrY_paternal_528.1;source_transcript_name=hg002_chrY_paternal_528.1;source_gene=hg002_chrY_paternal_528;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_528;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_528.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_528.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377242;transcript_id=HG03009_ch_T0000688;gene_id=HG03009_ch_G0000256;Parent=HG03009_ch_T0000688;transcript_name=hg002_chrY_paternal_528.1;gene_name=LOC105377242;ID=exon:HG03009_ch_T0000688:0;Name=LOC105377242;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	26684650	26686980	.	-	.	source_transcript=hg002_chrY_paternal_528.1;source_transcript_name=hg002_chrY_paternal_528.1;source_gene=hg002_chrY_paternal_528;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_528;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_528.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_528.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377242;transcript_id=HG03009_ch_T0000688;gene_id=HG03009_ch_G0000256;Parent=HG03009_ch_T0000688;transcript_name=hg002_chrY_paternal_528.1;gene_name=LOC105377242;ID=intron:HG03009_ch_T0000688:0;Name=LOC105377242;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	26686981	26687045	.	-	.	source_transcript=hg002_chrY_paternal_528.1;source_transcript_name=hg002_chrY_paternal_528.1;source_gene=hg002_chrY_paternal_528;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_528;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_528.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_528.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377242;transcript_id=HG03009_ch_T0000688;gene_id=HG03009_ch_G0000256;Parent=HG03009_ch_T0000688;transcript_name=hg002_chrY_paternal_528.1;gene_name=LOC105377242;ID=exon:HG03009_ch_T0000688:1;Name=LOC105377242;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	26687046	26687707	.	-	.	source_transcript=hg002_chrY_paternal_528.1;source_transcript_name=hg002_chrY_paternal_528.1;source_gene=hg002_chrY_paternal_528;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_528;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_528.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_528.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377242;transcript_id=HG03009_ch_T0000688;gene_id=HG03009_ch_G0000256;Parent=HG03009_ch_T0000688;transcript_name=hg002_chrY_paternal_528.1;gene_name=LOC105377242;ID=intron:HG03009_ch_T0000688:1;Name=LOC105377242;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	26687708	26687886	.	-	.	source_transcript=hg002_chrY_paternal_528.1;source_transcript_name=hg002_chrY_paternal_528.1;source_gene=hg002_chrY_paternal_528;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_528;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_528.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_528.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377242;transcript_id=HG03009_ch_T0000688;gene_id=HG03009_ch_G0000256;Parent=HG03009_ch_T0000688;transcript_name=hg002_chrY_paternal_528.1;gene_name=LOC105377242;ID=exon:HG03009_ch_T0000688:2;Name=LOC105377242;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	26684549	26687886	1000	-	.	source_transcript=hg002_chrY_paternal_528.2;source_transcript_name=hg002_chrY_paternal_528.1;source_gene=hg002_chrY_paternal_528;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_528;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_528.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_528.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377242;transcript_id=HG03009_ch_T0000689;gene_id=HG03009_ch_G0000256;Parent=HG03009_ch_G0000256;transcript_name=hg002_chrY_paternal_528.1;gene_name=LOC105377242;ID=HG03009_ch_T0000689;Name=LOC105377242
HG03009_chrY	CAT	exon	26684549	26684649	.	-	.	source_transcript=hg002_chrY_paternal_528.2;source_transcript_name=hg002_chrY_paternal_528.1;source_gene=hg002_chrY_paternal_528;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_528;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_528.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_528.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377242;transcript_id=HG03009_ch_T0000689;gene_id=HG03009_ch_G0000256;Parent=HG03009_ch_T0000689;transcript_name=hg002_chrY_paternal_528.1;gene_name=LOC105377242;ID=exon:HG03009_ch_T0000689:0;Name=LOC105377242;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	26684650	26687007	.	-	.	source_transcript=hg002_chrY_paternal_528.2;source_transcript_name=hg002_chrY_paternal_528.1;source_gene=hg002_chrY_paternal_528;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_528;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_528.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_528.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377242;transcript_id=HG03009_ch_T0000689;gene_id=HG03009_ch_G0000256;Parent=HG03009_ch_T0000689;transcript_name=hg002_chrY_paternal_528.1;gene_name=LOC105377242;ID=intron:HG03009_ch_T0000689:0;Name=LOC105377242;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	26687008	26687045	.	-	.	source_transcript=hg002_chrY_paternal_528.2;source_transcript_name=hg002_chrY_paternal_528.1;source_gene=hg002_chrY_paternal_528;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_528;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_528.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_528.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377242;transcript_id=HG03009_ch_T0000689;gene_id=HG03009_ch_G0000256;Parent=HG03009_ch_T0000689;transcript_name=hg002_chrY_paternal_528.1;gene_name=LOC105377242;ID=exon:HG03009_ch_T0000689:1;Name=LOC105377242;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	26687046	26687707	.	-	.	source_transcript=hg002_chrY_paternal_528.2;source_transcript_name=hg002_chrY_paternal_528.1;source_gene=hg002_chrY_paternal_528;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_528;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_528.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_528.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377242;transcript_id=HG03009_ch_T0000689;gene_id=HG03009_ch_G0000256;Parent=HG03009_ch_T0000689;transcript_name=hg002_chrY_paternal_528.1;gene_name=LOC105377242;ID=intron:HG03009_ch_T0000689:1;Name=LOC105377242;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	26687708	26687886	.	-	.	source_transcript=hg002_chrY_paternal_528.2;source_transcript_name=hg002_chrY_paternal_528.1;source_gene=hg002_chrY_paternal_528;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_528;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_528.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_528.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377242;transcript_id=HG03009_ch_T0000689;gene_id=HG03009_ch_G0000256;Parent=HG03009_ch_T0000689;transcript_name=hg002_chrY_paternal_528.1;gene_name=LOC105377242;ID=exon:HG03009_ch_T0000689:2;Name=LOC105377242;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	26707505	26768710	.	-	.	source_gene_common_name=DAZ3;source_gene=hg002_chrY_paternal_526;gene_id=HG03009_ch_G0000257;gene_biotype=protein_coding;gene_name=DAZ3;gene_sources=liftoff;ID=HG03009_ch_G0000257;Name=DAZ3
HG03009_chrY	CAT	transcript	26707505	26768710	100	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03009_ch_T0000690;gene_id=HG03009_ch_G0000257;Parent=HG03009_ch_G0000257;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=HG03009_ch_T0000690;Name=DAZ3
HG03009_chrY	CAT	exon	26707505	26709361	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03009_ch_T0000690;gene_id=HG03009_ch_G0000257;Parent=HG03009_ch_T0000690;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG03009_ch_T0000690:0;Name=DAZ3;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	26709362	26713334	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03009_ch_T0000690;gene_id=HG03009_ch_G0000257;Parent=HG03009_ch_T0000690;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG03009_ch_T0000690:0;Name=DAZ3;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	26713335	26713433	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03009_ch_T0000690;gene_id=HG03009_ch_G0000257;Parent=HG03009_ch_T0000690;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG03009_ch_T0000690:1;Name=DAZ3;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	26713370	26713433	.	-	1	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03009_ch_T0000690;gene_id=HG03009_ch_G0000257;Parent=HG03009_ch_T0000690;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG03009_ch_T0000690:0;Name=DAZ3;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	26713370	26713372	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03009_ch_T0000690;gene_id=HG03009_ch_G0000257;Parent=HG03009_ch_T0000690;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=stop_codon:HG03009_ch_T0000690;Name=DAZ3;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	26713434	26718005	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03009_ch_T0000690;gene_id=HG03009_ch_G0000257;Parent=HG03009_ch_T0000690;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG03009_ch_T0000690:1;Name=DAZ3;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	26718006	26718040	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03009_ch_T0000690;gene_id=HG03009_ch_G0000257;Parent=HG03009_ch_T0000690;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG03009_ch_T0000690:2;Name=DAZ3;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	26718006	26718040	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03009_ch_T0000690;gene_id=HG03009_ch_G0000257;Parent=HG03009_ch_T0000690;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG03009_ch_T0000690:1;Name=DAZ3;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	26718041	26718785	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03009_ch_T0000690;gene_id=HG03009_ch_G0000257;Parent=HG03009_ch_T0000690;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG03009_ch_T0000690:2;Name=DAZ3;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	26718786	26718857	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03009_ch_T0000690;gene_id=HG03009_ch_G0000257;Parent=HG03009_ch_T0000690;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG03009_ch_T0000690:3;Name=DAZ3;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	26718786	26718857	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03009_ch_T0000690;gene_id=HG03009_ch_G0000257;Parent=HG03009_ch_T0000690;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG03009_ch_T0000690:2;Name=DAZ3;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	26718858	26740498	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03009_ch_T0000690;gene_id=HG03009_ch_G0000257;Parent=HG03009_ch_T0000690;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG03009_ch_T0000690:3;Name=DAZ3;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	26740499	26740570	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03009_ch_T0000690;gene_id=HG03009_ch_G0000257;Parent=HG03009_ch_T0000690;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG03009_ch_T0000690:4;Name=DAZ3;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	26740499	26740570	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03009_ch_T0000690;gene_id=HG03009_ch_G0000257;Parent=HG03009_ch_T0000690;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG03009_ch_T0000690:3;Name=DAZ3;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	26740571	26742894	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03009_ch_T0000690;gene_id=HG03009_ch_G0000257;Parent=HG03009_ch_T0000690;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG03009_ch_T0000690:4;Name=DAZ3;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	26742895	26742966	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03009_ch_T0000690;gene_id=HG03009_ch_G0000257;Parent=HG03009_ch_T0000690;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG03009_ch_T0000690:5;Name=DAZ3;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	26742895	26742966	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03009_ch_T0000690;gene_id=HG03009_ch_G0000257;Parent=HG03009_ch_T0000690;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG03009_ch_T0000690:4;Name=DAZ3;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	26742967	26745283	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03009_ch_T0000690;gene_id=HG03009_ch_G0000257;Parent=HG03009_ch_T0000690;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG03009_ch_T0000690:5;Name=DAZ3;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	26745284	26745355	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03009_ch_T0000690;gene_id=HG03009_ch_G0000257;Parent=HG03009_ch_T0000690;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG03009_ch_T0000690:6;Name=DAZ3;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	26745284	26745355	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03009_ch_T0000690;gene_id=HG03009_ch_G0000257;Parent=HG03009_ch_T0000690;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG03009_ch_T0000690:5;Name=DAZ3;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	26745356	26747725	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03009_ch_T0000690;gene_id=HG03009_ch_G0000257;Parent=HG03009_ch_T0000690;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG03009_ch_T0000690:6;Name=DAZ3;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	26747726	26747797	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03009_ch_T0000690;gene_id=HG03009_ch_G0000257;Parent=HG03009_ch_T0000690;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG03009_ch_T0000690:7;Name=DAZ3;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	26747726	26747797	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03009_ch_T0000690;gene_id=HG03009_ch_G0000257;Parent=HG03009_ch_T0000690;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG03009_ch_T0000690:6;Name=DAZ3;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	26747798	26760044	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03009_ch_T0000690;gene_id=HG03009_ch_G0000257;Parent=HG03009_ch_T0000690;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG03009_ch_T0000690:7;Name=DAZ3;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	26760045	26760184	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03009_ch_T0000690;gene_id=HG03009_ch_G0000257;Parent=HG03009_ch_T0000690;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG03009_ch_T0000690:8;Name=DAZ3;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	26760045	26760184	.	-	2	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03009_ch_T0000690;gene_id=HG03009_ch_G0000257;Parent=HG03009_ch_T0000690;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG03009_ch_T0000690:7;Name=DAZ3;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	26760185	26760273	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03009_ch_T0000690;gene_id=HG03009_ch_G0000257;Parent=HG03009_ch_T0000690;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG03009_ch_T0000690:8;Name=DAZ3;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	26760274	26760337	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03009_ch_T0000690;gene_id=HG03009_ch_G0000257;Parent=HG03009_ch_T0000690;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG03009_ch_T0000690:9;Name=DAZ3;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	26760274	26760337	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03009_ch_T0000690;gene_id=HG03009_ch_G0000257;Parent=HG03009_ch_T0000690;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG03009_ch_T0000690:8;Name=DAZ3;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	26760338	26760773	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03009_ch_T0000690;gene_id=HG03009_ch_G0000257;Parent=HG03009_ch_T0000690;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG03009_ch_T0000690:9;Name=DAZ3;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	26760774	26760825	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03009_ch_T0000690;gene_id=HG03009_ch_G0000257;Parent=HG03009_ch_T0000690;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG03009_ch_T0000690:10;Name=DAZ3;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	26760774	26760825	.	-	1	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03009_ch_T0000690;gene_id=HG03009_ch_G0000257;Parent=HG03009_ch_T0000690;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG03009_ch_T0000690:9;Name=DAZ3;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	26760826	26761385	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03009_ch_T0000690;gene_id=HG03009_ch_G0000257;Parent=HG03009_ch_T0000690;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG03009_ch_T0000690:10;Name=DAZ3;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	26761386	26761477	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03009_ch_T0000690;gene_id=HG03009_ch_G0000257;Parent=HG03009_ch_T0000690;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG03009_ch_T0000690:11;Name=DAZ3;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	26761386	26761477	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03009_ch_T0000690;gene_id=HG03009_ch_G0000257;Parent=HG03009_ch_T0000690;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG03009_ch_T0000690:10;Name=DAZ3;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	26761478	26761751	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03009_ch_T0000690;gene_id=HG03009_ch_G0000257;Parent=HG03009_ch_T0000690;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG03009_ch_T0000690:11;Name=DAZ3;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	26761752	26761898	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03009_ch_T0000690;gene_id=HG03009_ch_G0000257;Parent=HG03009_ch_T0000690;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG03009_ch_T0000690:12;Name=DAZ3;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	26761752	26761898	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03009_ch_T0000690;gene_id=HG03009_ch_G0000257;Parent=HG03009_ch_T0000690;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG03009_ch_T0000690:11;Name=DAZ3;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	26761899	26768499	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03009_ch_T0000690;gene_id=HG03009_ch_G0000257;Parent=HG03009_ch_T0000690;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG03009_ch_T0000690:12;Name=DAZ3;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	26768500	26768710	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03009_ch_T0000690;gene_id=HG03009_ch_G0000257;Parent=HG03009_ch_T0000690;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG03009_ch_T0000690:13;Name=DAZ3;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	26768500	26768502	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03009_ch_T0000690;gene_id=HG03009_ch_G0000257;Parent=HG03009_ch_T0000690;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG03009_ch_T0000690:12;Name=DAZ3;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	26768500	26768502	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03009_ch_T0000690;gene_id=HG03009_ch_G0000257;Parent=HG03009_ch_T0000690;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=start_codon:HG03009_ch_T0000690;Name=DAZ3;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	26789137	26844320	.	+	.	source_gene_common_name=DAZ4;source_gene=hg002_chrY_paternal_527;gene_id=HG03009_ch_G0000258;gene_biotype=protein_coding;gene_name=DAZ4;gene_sources=liftoff;ID=HG03009_ch_G0000258;Name=DAZ4
HG03009_chrY	CAT	transcript	26789137	26844320	9990	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=299.70799999999997;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000691;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_G0000258;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=HG03009_ch_T0000691;Name=DAZ4
HG03009_chrY	CAT	exon	26789137	26789446	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=299.70799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000691;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000691;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03009_ch_T0000691:0;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	26789444	26789446	.	+	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=299.70799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000691;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000691;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03009_ch_T0000691:0;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	26789444	26789446	.	+	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=299.70799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000691;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000691;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=start_codon:HG03009_ch_T0000691;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	26789447	26796045	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=299.70799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000691;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000691;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03009_ch_T0000691:0;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	26796046	26796192	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=299.70799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000691;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000691;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03009_ch_T0000691:1;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	26796046	26796192	.	+	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=299.70799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000691;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000691;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03009_ch_T0000691:1;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	26796193	26796466	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=299.70799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000691;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000691;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03009_ch_T0000691:1;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	26796467	26796558	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=299.70799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000691;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000691;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03009_ch_T0000691:2;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	26796467	26796558	.	+	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=299.70799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000691;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000691;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03009_ch_T0000691:2;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	26796559	26797118	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=299.70799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000691;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000691;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03009_ch_T0000691:2;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	26797119	26797170	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=299.70799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000691;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000691;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03009_ch_T0000691:3;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	26797119	26797170	.	+	1	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=299.70799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000691;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000691;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03009_ch_T0000691:3;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	26797171	26797606	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=299.70799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000691;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000691;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03009_ch_T0000691:3;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	26797607	26797670	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=299.70799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000691;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000691;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03009_ch_T0000691:4;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	26797607	26797670	.	+	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=299.70799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000691;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000691;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03009_ch_T0000691:4;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	26797671	26797759	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=299.70799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000691;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000691;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03009_ch_T0000691:4;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	26797760	26797899	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=299.70799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000691;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000691;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03009_ch_T0000691:5;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	26797760	26797899	.	+	2	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=299.70799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000691;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000691;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03009_ch_T0000691:5;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	26797900	26799299	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=299.70799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000691;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000691;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03009_ch_T0000691:5;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	26799300	26799371	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=299.70799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000691;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000691;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03009_ch_T0000691:6;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	26799300	26799371	.	+	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=299.70799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000691;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000691;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03009_ch_T0000691:6;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	26799372	26801742	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=299.70799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000691;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000691;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03009_ch_T0000691:6;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	26801743	26801814	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=299.70799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000691;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000691;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03009_ch_T0000691:7;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	26801743	26801814	.	+	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=299.70799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000691;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000691;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03009_ch_T0000691:7;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	26801815	26804132	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=299.70799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000691;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000691;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03009_ch_T0000691:7;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	26804133	26804204	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=299.70799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000691;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000691;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03009_ch_T0000691:8;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	26804133	26804204	.	+	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=299.70799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000691;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000691;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03009_ch_T0000691:8;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	26804205	26806528	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=299.70799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000691;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000691;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03009_ch_T0000691:8;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	26806529	26806600	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=299.70799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000691;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000691;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03009_ch_T0000691:9;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	26806529	26806600	.	+	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=299.70799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000691;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000691;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03009_ch_T0000691:9;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	26806601	26813685	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=299.70799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000691;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000691;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03009_ch_T0000691:9;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	26813686	26813757	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=299.70799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000691;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000691;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03009_ch_T0000691:10;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	26813686	26813757	.	+	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=299.70799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000691;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000691;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03009_ch_T0000691:10;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	26813758	26832986	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=299.70799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000691;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000691;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03009_ch_T0000691:10;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	26832987	26833058	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=299.70799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000691;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000691;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03009_ch_T0000691:11;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	26832987	26833058	.	+	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=299.70799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000691;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000691;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03009_ch_T0000691:11;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	26833059	26833803	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=299.70799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000691;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000691;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03009_ch_T0000691:11;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	26833804	26833838	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=299.70799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000691;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000691;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03009_ch_T0000691:12;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	26833804	26833838	.	+	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=299.70799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000691;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000691;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03009_ch_T0000691:12;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	26833839	26838410	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=299.70799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000691;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000691;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03009_ch_T0000691:12;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	26838411	26838509	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=299.70799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000691;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000691;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03009_ch_T0000691:13;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	26838411	26838474	.	+	1	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=299.70799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000691;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000691;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03009_ch_T0000691:13;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	26838472	26838474	.	+	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=299.70799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000691;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000691;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=stop_codon:HG03009_ch_T0000691;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	26838510	26842463	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=299.70799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000691;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000691;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03009_ch_T0000691:13;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	26842464	26844320	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=299.70799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000691;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000691;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03009_ch_T0000691:14;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	26789137	26844320	10000	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000692;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_G0000258;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=HG03009_ch_T0000692;Name=DAZ4
HG03009_chrY	CAT	exon	26789137	26789446	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000692;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000692;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03009_ch_T0000692:0;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	26789444	26789446	.	+	0	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000692;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000692;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03009_ch_T0000692:0;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	26789444	26789446	.	+	0	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000692;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000692;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=start_codon:HG03009_ch_T0000692;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	26789447	26799299	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000692;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000692;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03009_ch_T0000692:0;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	26799300	26799371	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000692;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000692;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03009_ch_T0000692:1;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	26799300	26799371	.	+	0	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000692;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000692;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03009_ch_T0000692:1;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	26799372	26801742	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000692;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000692;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03009_ch_T0000692:1;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	26801743	26801814	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000692;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000692;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03009_ch_T0000692:2;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	26801743	26801814	.	+	0	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000692;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000692;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03009_ch_T0000692:2;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	26801815	26804132	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000692;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000692;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03009_ch_T0000692:2;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	26804133	26804204	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000692;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000692;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03009_ch_T0000692:3;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	26804133	26804204	.	+	0	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000692;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000692;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03009_ch_T0000692:3;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	26804205	26806528	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000692;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000692;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03009_ch_T0000692:3;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	26806529	26806600	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000692;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000692;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03009_ch_T0000692:4;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	26806529	26806600	.	+	0	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000692;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000692;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03009_ch_T0000692:4;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	26806601	26832986	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000692;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000692;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03009_ch_T0000692:4;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	26832987	26833058	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000692;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000692;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03009_ch_T0000692:5;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	26832987	26833058	.	+	0	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000692;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000692;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03009_ch_T0000692:5;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	26833059	26833803	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000692;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000692;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03009_ch_T0000692:5;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	26833804	26833838	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000692;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000692;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03009_ch_T0000692:6;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	26833804	26833838	.	+	0	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000692;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000692;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03009_ch_T0000692:6;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	26833839	26838410	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000692;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000692;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03009_ch_T0000692:6;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	26838411	26838509	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000692;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000692;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03009_ch_T0000692:7;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	26838411	26838474	.	+	1	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000692;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000692;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03009_ch_T0000692:7;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	26838472	26838474	.	+	0	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000692;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000692;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=stop_codon:HG03009_ch_T0000692;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	26838510	26842463	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000692;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000692;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03009_ch_T0000692:7;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	26842464	26844320	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000692;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000692;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03009_ch_T0000692:8;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	26789236	26844320	9940	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=298.557;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000693;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_G0000258;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=HG03009_ch_T0000693;Name=DAZ4
HG03009_chrY	CAT	exon	26789236	26789446	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=298.557;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000693;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000693;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03009_ch_T0000693:0;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	26789444	26789446	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=298.557;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000693;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000693;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03009_ch_T0000693:0;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	26789444	26789446	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=298.557;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000693;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000693;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=start_codon:HG03009_ch_T0000693;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	26789447	26796045	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=298.557;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000693;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000693;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03009_ch_T0000693:0;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	26796046	26796192	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=298.557;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000693;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000693;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03009_ch_T0000693:1;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	26796046	26796192	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=298.557;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000693;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000693;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03009_ch_T0000693:1;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	26796193	26796466	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=298.557;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000693;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000693;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03009_ch_T0000693:1;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	26796467	26796558	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=298.557;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000693;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000693;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03009_ch_T0000693:2;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	26796467	26796558	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=298.557;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000693;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000693;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03009_ch_T0000693:2;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	26796559	26797118	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=298.557;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000693;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000693;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03009_ch_T0000693:2;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	26797119	26797170	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=298.557;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000693;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000693;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03009_ch_T0000693:3;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	26797119	26797170	.	+	1	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=298.557;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000693;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000693;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03009_ch_T0000693:3;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	26797171	26797606	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=298.557;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000693;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000693;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03009_ch_T0000693:3;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	26797607	26797670	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=298.557;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000693;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000693;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03009_ch_T0000693:4;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	26797607	26797670	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=298.557;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000693;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000693;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03009_ch_T0000693:4;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	26797671	26797759	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=298.557;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000693;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000693;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03009_ch_T0000693:4;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	26797760	26797899	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=298.557;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000693;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000693;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03009_ch_T0000693:5;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	26797760	26797899	.	+	2	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=298.557;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000693;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000693;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03009_ch_T0000693:5;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	26797900	26799299	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=298.557;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000693;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000693;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03009_ch_T0000693:5;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	26799300	26799371	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=298.557;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000693;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000693;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03009_ch_T0000693:6;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	26799300	26799371	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=298.557;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000693;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000693;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03009_ch_T0000693:6;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	26799372	26801742	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=298.557;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000693;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000693;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03009_ch_T0000693:6;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	26801743	26801814	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=298.557;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000693;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000693;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03009_ch_T0000693:7;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	26801743	26801814	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=298.557;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000693;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000693;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03009_ch_T0000693:7;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	26801815	26804132	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=298.557;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000693;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000693;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03009_ch_T0000693:7;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	26804133	26804204	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=298.557;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000693;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000693;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03009_ch_T0000693:8;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	26804133	26804204	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=298.557;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000693;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000693;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03009_ch_T0000693:8;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	26804205	26806528	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=298.557;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000693;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000693;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03009_ch_T0000693:8;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	26806529	26806600	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=298.557;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000693;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000693;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03009_ch_T0000693:9;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	26806529	26806600	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=298.557;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000693;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000693;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03009_ch_T0000693:9;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	26806601	26813685	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=298.557;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000693;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000693;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03009_ch_T0000693:9;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	26813686	26813757	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=298.557;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000693;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000693;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03009_ch_T0000693:10;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	26813686	26813757	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=298.557;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000693;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000693;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03009_ch_T0000693:10;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	26813758	26816065	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=298.557;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000693;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000693;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03009_ch_T0000693:10;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	26816066	26816137	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=298.557;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000693;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000693;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03009_ch_T0000693:11;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	26816066	26816137	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=298.557;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000693;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000693;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03009_ch_T0000693:11;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	26816138	26818442	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=298.557;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000693;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000693;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03009_ch_T0000693:11;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	26818443	26818514	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=298.557;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000693;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000693;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03009_ch_T0000693:12;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	26818443	26818514	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=298.557;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000693;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000693;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03009_ch_T0000693:12;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	26818515	26820822	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=298.557;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000693;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000693;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03009_ch_T0000693:12;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	26820823	26820894	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=298.557;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000693;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000693;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03009_ch_T0000693:13;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	26820823	26820894	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=298.557;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000693;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000693;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03009_ch_T0000693:13;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	26820895	26823199	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=298.557;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000693;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000693;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03009_ch_T0000693:13;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	26823200	26823271	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=298.557;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000693;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000693;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03009_ch_T0000693:14;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	26823200	26823271	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=298.557;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000693;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000693;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03009_ch_T0000693:14;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	26823272	26832986	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=298.557;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000693;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000693;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03009_ch_T0000693:14;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	26832987	26833058	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=298.557;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000693;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000693;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03009_ch_T0000693:15;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	26832987	26833058	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=298.557;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000693;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000693;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03009_ch_T0000693:15;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	26833059	26833803	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=298.557;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000693;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000693;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03009_ch_T0000693:15;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	26833804	26833838	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=298.557;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000693;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000693;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03009_ch_T0000693:16;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	26833804	26833838	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=298.557;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000693;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000693;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03009_ch_T0000693:16;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	26833839	26838410	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=298.557;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000693;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000693;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03009_ch_T0000693:16;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	26838411	26838509	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=298.557;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000693;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000693;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03009_ch_T0000693:17;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	26838411	26838474	.	+	1	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=298.557;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000693;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000693;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03009_ch_T0000693:17;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	26838472	26838474	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=298.557;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000693;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000693;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=stop_codon:HG03009_ch_T0000693;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	26838510	26842463	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=298.557;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000693;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000693;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03009_ch_T0000693:17;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	26842464	26844320	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=298.557;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03009_ch_T0000693;gene_id=HG03009_ch_G0000258;Parent=HG03009_ch_T0000693;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03009_ch_T0000693:18;Name=DAZ4;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	26863931	26867272	.	+	.	source_gene_common_name=LOC105377241;source_gene=hg002_chrY_paternal_525;gene_id=HG03009_ch_G0000259;gene_biotype=lncRNA;gene_name=LOC105377241;gene_sources=liftoff;ID=HG03009_ch_G0000259;Name=LOC105377241
HG03009_chrY	CAT	transcript	26863931	26867272	1000	+	.	source_transcript=hg002_chrY_paternal_525.1;source_transcript_name=hg002_chrY_paternal_525.1;source_gene=hg002_chrY_paternal_525;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_525;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_525.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_525.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377241;transcript_id=HG03009_ch_T0000694;gene_id=HG03009_ch_G0000259;Parent=HG03009_ch_G0000259;transcript_name=hg002_chrY_paternal_525.1;gene_name=LOC105377241;ID=HG03009_ch_T0000694;Name=LOC105377241
HG03009_chrY	CAT	exon	26863931	26864113	.	+	.	source_transcript=hg002_chrY_paternal_525.1;source_transcript_name=hg002_chrY_paternal_525.1;source_gene=hg002_chrY_paternal_525;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_525;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_525.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_525.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377241;transcript_id=HG03009_ch_T0000694;gene_id=HG03009_ch_G0000259;Parent=HG03009_ch_T0000694;transcript_name=hg002_chrY_paternal_525.1;gene_name=LOC105377241;ID=exon:HG03009_ch_T0000694:0;Name=LOC105377241;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	26864114	26864775	.	+	.	source_transcript=hg002_chrY_paternal_525.1;source_transcript_name=hg002_chrY_paternal_525.1;source_gene=hg002_chrY_paternal_525;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_525;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_525.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_525.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377241;transcript_id=HG03009_ch_T0000694;gene_id=HG03009_ch_G0000259;Parent=HG03009_ch_T0000694;transcript_name=hg002_chrY_paternal_525.1;gene_name=LOC105377241;ID=intron:HG03009_ch_T0000694:0;Name=LOC105377241;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	26864776	26864840	.	+	.	source_transcript=hg002_chrY_paternal_525.1;source_transcript_name=hg002_chrY_paternal_525.1;source_gene=hg002_chrY_paternal_525;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_525;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_525.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_525.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377241;transcript_id=HG03009_ch_T0000694;gene_id=HG03009_ch_G0000259;Parent=HG03009_ch_T0000694;transcript_name=hg002_chrY_paternal_525.1;gene_name=LOC105377241;ID=exon:HG03009_ch_T0000694:1;Name=LOC105377241;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	26864841	26867171	.	+	.	source_transcript=hg002_chrY_paternal_525.1;source_transcript_name=hg002_chrY_paternal_525.1;source_gene=hg002_chrY_paternal_525;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_525;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_525.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_525.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377241;transcript_id=HG03009_ch_T0000694;gene_id=HG03009_ch_G0000259;Parent=HG03009_ch_T0000694;transcript_name=hg002_chrY_paternal_525.1;gene_name=LOC105377241;ID=intron:HG03009_ch_T0000694:1;Name=LOC105377241;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	26867172	26867272	.	+	.	source_transcript=hg002_chrY_paternal_525.1;source_transcript_name=hg002_chrY_paternal_525.1;source_gene=hg002_chrY_paternal_525;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_525;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_525.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_525.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377241;transcript_id=HG03009_ch_T0000694;gene_id=HG03009_ch_G0000259;Parent=HG03009_ch_T0000694;transcript_name=hg002_chrY_paternal_525.1;gene_name=LOC105377241;ID=exon:HG03009_ch_T0000694:2;Name=LOC105377241;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	26863931	26867272	1000	+	.	source_transcript=hg002_chrY_paternal_525.2;source_transcript_name=hg002_chrY_paternal_525.1;source_gene=hg002_chrY_paternal_525;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_525;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_525.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_525.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377241;transcript_id=HG03009_ch_T0000695;gene_id=HG03009_ch_G0000259;Parent=HG03009_ch_G0000259;transcript_name=hg002_chrY_paternal_525.1;gene_name=LOC105377241;ID=HG03009_ch_T0000695;Name=LOC105377241
HG03009_chrY	CAT	exon	26863931	26864113	.	+	.	source_transcript=hg002_chrY_paternal_525.2;source_transcript_name=hg002_chrY_paternal_525.1;source_gene=hg002_chrY_paternal_525;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_525;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_525.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_525.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377241;transcript_id=HG03009_ch_T0000695;gene_id=HG03009_ch_G0000259;Parent=HG03009_ch_T0000695;transcript_name=hg002_chrY_paternal_525.1;gene_name=LOC105377241;ID=exon:HG03009_ch_T0000695:0;Name=LOC105377241;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	26864114	26864775	.	+	.	source_transcript=hg002_chrY_paternal_525.2;source_transcript_name=hg002_chrY_paternal_525.1;source_gene=hg002_chrY_paternal_525;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_525;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_525.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_525.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377241;transcript_id=HG03009_ch_T0000695;gene_id=HG03009_ch_G0000259;Parent=HG03009_ch_T0000695;transcript_name=hg002_chrY_paternal_525.1;gene_name=LOC105377241;ID=intron:HG03009_ch_T0000695:0;Name=LOC105377241;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	26864776	26864813	.	+	.	source_transcript=hg002_chrY_paternal_525.2;source_transcript_name=hg002_chrY_paternal_525.1;source_gene=hg002_chrY_paternal_525;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_525;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_525.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_525.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377241;transcript_id=HG03009_ch_T0000695;gene_id=HG03009_ch_G0000259;Parent=HG03009_ch_T0000695;transcript_name=hg002_chrY_paternal_525.1;gene_name=LOC105377241;ID=exon:HG03009_ch_T0000695:1;Name=LOC105377241;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	26864814	26867171	.	+	.	source_transcript=hg002_chrY_paternal_525.2;source_transcript_name=hg002_chrY_paternal_525.1;source_gene=hg002_chrY_paternal_525;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_525;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_525.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_525.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377241;transcript_id=HG03009_ch_T0000695;gene_id=HG03009_ch_G0000259;Parent=HG03009_ch_T0000695;transcript_name=hg002_chrY_paternal_525.1;gene_name=LOC105377241;ID=intron:HG03009_ch_T0000695:1;Name=LOC105377241;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	26867172	26867272	.	+	.	source_transcript=hg002_chrY_paternal_525.2;source_transcript_name=hg002_chrY_paternal_525.1;source_gene=hg002_chrY_paternal_525;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_525;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_525.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_525.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377241;transcript_id=HG03009_ch_T0000695;gene_id=HG03009_ch_G0000259;Parent=HG03009_ch_T0000695;transcript_name=hg002_chrY_paternal_525.1;gene_name=LOC105377241;ID=exon:HG03009_ch_T0000695:2;Name=LOC105377241;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	26968181	26989384	.	-	.	source_gene_common_name=BPY2C;source_gene=hg002_chrY_paternal_520;gene_id=HG03009_ch_G0000260;gene_biotype=protein_coding;gene_name=BPY2C;gene_sources=liftoff;ID=HG03009_ch_G0000260;Name=BPY2C
HG03009_chrY	CAT	transcript	26968181	26989384	100	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG03009_ch_T0000696;gene_id=HG03009_ch_G0000260;Parent=HG03009_ch_G0000260;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=HG03009_ch_T0000696;Name=BPY2C
HG03009_chrY	CAT	exon	26968181	26968502	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG03009_ch_T0000696;gene_id=HG03009_ch_G0000260;Parent=HG03009_ch_T0000696;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=exon:HG03009_ch_T0000696:0;Name=BPY2C;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	26968503	26968596	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG03009_ch_T0000696;gene_id=HG03009_ch_G0000260;Parent=HG03009_ch_T0000696;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=intron:HG03009_ch_T0000696:0;Name=BPY2C;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	26968597	26968721	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG03009_ch_T0000696;gene_id=HG03009_ch_G0000260;Parent=HG03009_ch_T0000696;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=exon:HG03009_ch_T0000696:1;Name=BPY2C;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	26968722	26975271	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG03009_ch_T0000696;gene_id=HG03009_ch_G0000260;Parent=HG03009_ch_T0000696;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=intron:HG03009_ch_T0000696:1;Name=BPY2C;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	26975272	26975396	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG03009_ch_T0000696;gene_id=HG03009_ch_G0000260;Parent=HG03009_ch_T0000696;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=exon:HG03009_ch_T0000696:2;Name=BPY2C;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	26975378	26975396	.	-	1	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG03009_ch_T0000696;gene_id=HG03009_ch_G0000260;Parent=HG03009_ch_T0000696;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=CDS:HG03009_ch_T0000696:0;Name=BPY2C;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	26975378	26975380	.	-	0	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG03009_ch_T0000696;gene_id=HG03009_ch_G0000260;Parent=HG03009_ch_T0000696;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=stop_codon:HG03009_ch_T0000696;Name=BPY2C;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	26975397	26976088	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG03009_ch_T0000696;gene_id=HG03009_ch_G0000260;Parent=HG03009_ch_T0000696;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=intron:HG03009_ch_T0000696:2;Name=BPY2C;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	26976089	26976194	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG03009_ch_T0000696;gene_id=HG03009_ch_G0000260;Parent=HG03009_ch_T0000696;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=exon:HG03009_ch_T0000696:3;Name=BPY2C;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	26976089	26976194	.	-	2	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG03009_ch_T0000696;gene_id=HG03009_ch_G0000260;Parent=HG03009_ch_T0000696;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=CDS:HG03009_ch_T0000696:1;Name=BPY2C;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	26976195	26979048	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG03009_ch_T0000696;gene_id=HG03009_ch_G0000260;Parent=HG03009_ch_T0000696;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=intron:HG03009_ch_T0000696:3;Name=BPY2C;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	26979049	26979166	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG03009_ch_T0000696;gene_id=HG03009_ch_G0000260;Parent=HG03009_ch_T0000696;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=exon:HG03009_ch_T0000696:4;Name=BPY2C;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	26979049	26979166	.	-	0	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG03009_ch_T0000696;gene_id=HG03009_ch_G0000260;Parent=HG03009_ch_T0000696;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=CDS:HG03009_ch_T0000696:2;Name=BPY2C;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	26979167	26981225	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG03009_ch_T0000696;gene_id=HG03009_ch_G0000260;Parent=HG03009_ch_T0000696;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=intron:HG03009_ch_T0000696:4;Name=BPY2C;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	26981226	26981344	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG03009_ch_T0000696;gene_id=HG03009_ch_G0000260;Parent=HG03009_ch_T0000696;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=exon:HG03009_ch_T0000696:5;Name=BPY2C;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	26981226	26981303	.	-	0	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG03009_ch_T0000696;gene_id=HG03009_ch_G0000260;Parent=HG03009_ch_T0000696;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=CDS:HG03009_ch_T0000696:3;Name=BPY2C;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	26981301	26981303	.	-	0	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG03009_ch_T0000696;gene_id=HG03009_ch_G0000260;Parent=HG03009_ch_T0000696;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=start_codon:HG03009_ch_T0000696;Name=BPY2C;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	26981345	26985753	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG03009_ch_T0000696;gene_id=HG03009_ch_G0000260;Parent=HG03009_ch_T0000696;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=intron:HG03009_ch_T0000696:5;Name=BPY2C;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	26985754	26985890	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG03009_ch_T0000696;gene_id=HG03009_ch_G0000260;Parent=HG03009_ch_T0000696;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=exon:HG03009_ch_T0000696:6;Name=BPY2C;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	26985891	26988955	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG03009_ch_T0000696;gene_id=HG03009_ch_G0000260;Parent=HG03009_ch_T0000696;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=intron:HG03009_ch_T0000696:6;Name=BPY2C;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	26988956	26989078	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG03009_ch_T0000696;gene_id=HG03009_ch_G0000260;Parent=HG03009_ch_T0000696;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=exon:HG03009_ch_T0000696:7;Name=BPY2C;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	26989079	26989353	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG03009_ch_T0000696;gene_id=HG03009_ch_G0000260;Parent=HG03009_ch_T0000696;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=intron:HG03009_ch_T0000696:7;Name=BPY2C;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	26989354	26989384	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG03009_ch_T0000696;gene_id=HG03009_ch_G0000260;Parent=HG03009_ch_T0000696;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=exon:HG03009_ch_T0000696:8;Name=BPY2C;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	27000363	27037183	.	-	.	source_gene_common_name=TTTY4;source_gene=hg002_chrY_paternal_534;gene_id=HG03009_ch_G0000261;gene_biotype=lncRNA;gene_name=TTTY4;gene_sources=liftoff;ID=HG03009_ch_G0000261;Name=TTTY4
HG03009_chrY	CAT	transcript	27000363	27037183	1000	-	.	source_transcript=hg002_chrY_paternal_534.1;source_transcript_name=hg002_chrY_paternal_534.1;source_gene=hg002_chrY_paternal_534;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_534;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_534.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_534.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4;transcript_id=HG03009_ch_T0000697;gene_id=HG03009_ch_G0000261;Parent=HG03009_ch_G0000261;transcript_name=hg002_chrY_paternal_534.1;gene_name=TTTY4;ID=HG03009_ch_T0000697;Name=TTTY4
HG03009_chrY	CAT	exon	27000363	27001363	.	-	.	source_transcript=hg002_chrY_paternal_534.1;source_transcript_name=hg002_chrY_paternal_534.1;source_gene=hg002_chrY_paternal_534;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_534;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_534.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_534.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4;transcript_id=HG03009_ch_T0000697;gene_id=HG03009_ch_G0000261;Parent=HG03009_ch_T0000697;transcript_name=hg002_chrY_paternal_534.1;gene_name=TTTY4;ID=exon:HG03009_ch_T0000697:0;Name=TTTY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	27001364	27008013	.	-	.	source_transcript=hg002_chrY_paternal_534.1;source_transcript_name=hg002_chrY_paternal_534.1;source_gene=hg002_chrY_paternal_534;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_534;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_534.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_534.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4;transcript_id=HG03009_ch_T0000697;gene_id=HG03009_ch_G0000261;Parent=HG03009_ch_T0000697;transcript_name=hg002_chrY_paternal_534.1;gene_name=TTTY4;ID=intron:HG03009_ch_T0000697:0;Name=TTTY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	27008014	27008121	.	-	.	source_transcript=hg002_chrY_paternal_534.1;source_transcript_name=hg002_chrY_paternal_534.1;source_gene=hg002_chrY_paternal_534;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_534;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_534.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_534.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4;transcript_id=HG03009_ch_T0000697;gene_id=HG03009_ch_G0000261;Parent=HG03009_ch_T0000697;transcript_name=hg002_chrY_paternal_534.1;gene_name=TTTY4;ID=exon:HG03009_ch_T0000697:1;Name=TTTY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	27008122	27009925	.	-	.	source_transcript=hg002_chrY_paternal_534.1;source_transcript_name=hg002_chrY_paternal_534.1;source_gene=hg002_chrY_paternal_534;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_534;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_534.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_534.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4;transcript_id=HG03009_ch_T0000697;gene_id=HG03009_ch_G0000261;Parent=HG03009_ch_T0000697;transcript_name=hg002_chrY_paternal_534.1;gene_name=TTTY4;ID=intron:HG03009_ch_T0000697:1;Name=TTTY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	27009926	27010001	.	-	.	source_transcript=hg002_chrY_paternal_534.1;source_transcript_name=hg002_chrY_paternal_534.1;source_gene=hg002_chrY_paternal_534;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_534;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_534.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_534.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4;transcript_id=HG03009_ch_T0000697;gene_id=HG03009_ch_G0000261;Parent=HG03009_ch_T0000697;transcript_name=hg002_chrY_paternal_534.1;gene_name=TTTY4;ID=exon:HG03009_ch_T0000697:2;Name=TTTY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	27010002	27037022	.	-	.	source_transcript=hg002_chrY_paternal_534.1;source_transcript_name=hg002_chrY_paternal_534.1;source_gene=hg002_chrY_paternal_534;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_534;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_534.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_534.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4;transcript_id=HG03009_ch_T0000697;gene_id=HG03009_ch_G0000261;Parent=HG03009_ch_T0000697;transcript_name=hg002_chrY_paternal_534.1;gene_name=TTTY4;ID=intron:HG03009_ch_T0000697:2;Name=TTTY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	27037023	27037183	.	-	.	source_transcript=hg002_chrY_paternal_534.1;source_transcript_name=hg002_chrY_paternal_534.1;source_gene=hg002_chrY_paternal_534;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_534;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_534.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_534.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4;transcript_id=HG03009_ch_T0000697;gene_id=HG03009_ch_G0000261;Parent=HG03009_ch_T0000697;transcript_name=hg002_chrY_paternal_534.1;gene_name=TTTY4;ID=exon:HG03009_ch_T0000697:3;Name=TTTY4;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	27120939	27122069	.	-	.	source_gene_common_name=TTTY17B;source_gene=hg002_chrY_paternal_611;alternative_source_transcripts=hg002_chrY_paternal_611.1;gene_id=HG03009_ch_G0000262;gene_biotype=lncRNA;gene_name=TTTY17B;gene_sources=liftoff;ID=HG03009_ch_G0000262;Name=TTTY17B
HG03009_chrY	CAT	transcript	27120939	27122069	1000	-	.	source_transcript=hg002_chrY_paternal_611.1;source_transcript_name=hg002_chrY_paternal_611.1;source_gene=hg002_chrY_paternal_611;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_611;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_611.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_611.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17B;alternative_source_transcripts=hg002_chrY_paternal_611.1;transcript_id=HG03009_ch_T0000698;gene_id=HG03009_ch_G0000262;Parent=HG03009_ch_G0000262;transcript_name=hg002_chrY_paternal_611.1;gene_name=TTTY17B;ID=HG03009_ch_T0000698;Name=TTTY17B
HG03009_chrY	CAT	exon	27120939	27121044	.	-	.	source_transcript=hg002_chrY_paternal_611.1;source_transcript_name=hg002_chrY_paternal_611.1;source_gene=hg002_chrY_paternal_611;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_611;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_611.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_611.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17B;alternative_source_transcripts=hg002_chrY_paternal_611.1;transcript_id=HG03009_ch_T0000698;gene_id=HG03009_ch_G0000262;Parent=HG03009_ch_T0000698;transcript_name=hg002_chrY_paternal_611.1;gene_name=TTTY17B;ID=exon:HG03009_ch_T0000698:0;Name=TTTY17B;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	27121045	27122009	.	-	.	source_transcript=hg002_chrY_paternal_611.1;source_transcript_name=hg002_chrY_paternal_611.1;source_gene=hg002_chrY_paternal_611;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_611;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_611.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_611.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17B;alternative_source_transcripts=hg002_chrY_paternal_611.1;transcript_id=HG03009_ch_T0000698;gene_id=HG03009_ch_G0000262;Parent=HG03009_ch_T0000698;transcript_name=hg002_chrY_paternal_611.1;gene_name=TTTY17B;ID=intron:HG03009_ch_T0000698:0;Name=TTTY17B;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	27122010	27122069	.	-	.	source_transcript=hg002_chrY_paternal_611.1;source_transcript_name=hg002_chrY_paternal_611.1;source_gene=hg002_chrY_paternal_611;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_611;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_611.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_611.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17B;alternative_source_transcripts=hg002_chrY_paternal_611.1;transcript_id=HG03009_ch_T0000698;gene_id=HG03009_ch_G0000262;Parent=HG03009_ch_T0000698;transcript_name=hg002_chrY_paternal_611.1;gene_name=TTTY17B;ID=exon:HG03009_ch_T0000698:1;Name=TTTY17B;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	27174339	27187444	.	-	.	source_gene_common_name=LOC107987350;source_gene=hg002_chrY_paternal_612;alternative_source_transcripts=hg002_chrY_paternal_612.1;gene_id=HG03009_ch_G0000263;gene_biotype=lncRNA;gene_name=LOC107987350;gene_sources=liftoff;ID=HG03009_ch_G0000263;Name=LOC107987350
HG03009_chrY	CAT	transcript	27174339	27187444	1000	-	.	source_transcript=hg002_chrY_paternal_612.1;source_transcript_name=hg002_chrY_paternal_612.1;source_gene=hg002_chrY_paternal_612;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_612;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_612.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_612.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_612.1;transcript_id=HG03009_ch_T0000699;gene_id=HG03009_ch_G0000263;Parent=HG03009_ch_G0000263;transcript_name=hg002_chrY_paternal_612.1;gene_name=LOC107987350;ID=HG03009_ch_T0000699;Name=LOC107987350
HG03009_chrY	CAT	exon	27174339	27178212	.	-	.	source_transcript=hg002_chrY_paternal_612.1;source_transcript_name=hg002_chrY_paternal_612.1;source_gene=hg002_chrY_paternal_612;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_612;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_612.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_612.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_612.1;transcript_id=HG03009_ch_T0000699;gene_id=HG03009_ch_G0000263;Parent=HG03009_ch_T0000699;transcript_name=hg002_chrY_paternal_612.1;gene_name=LOC107987350;ID=exon:HG03009_ch_T0000699:0;Name=LOC107987350;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	27178213	27178853	.	-	.	source_transcript=hg002_chrY_paternal_612.1;source_transcript_name=hg002_chrY_paternal_612.1;source_gene=hg002_chrY_paternal_612;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_612;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_612.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_612.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_612.1;transcript_id=HG03009_ch_T0000699;gene_id=HG03009_ch_G0000263;Parent=HG03009_ch_T0000699;transcript_name=hg002_chrY_paternal_612.1;gene_name=LOC107987350;ID=intron:HG03009_ch_T0000699:0;Name=LOC107987350;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	27178854	27181018	.	-	.	source_transcript=hg002_chrY_paternal_612.1;source_transcript_name=hg002_chrY_paternal_612.1;source_gene=hg002_chrY_paternal_612;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_612;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_612.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_612.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_612.1;transcript_id=HG03009_ch_T0000699;gene_id=HG03009_ch_G0000263;Parent=HG03009_ch_T0000699;transcript_name=hg002_chrY_paternal_612.1;gene_name=LOC107987350;ID=exon:HG03009_ch_T0000699:1;Name=LOC107987350;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	27181019	27186988	.	-	.	source_transcript=hg002_chrY_paternal_612.1;source_transcript_name=hg002_chrY_paternal_612.1;source_gene=hg002_chrY_paternal_612;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_612;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_612.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_612.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_612.1;transcript_id=HG03009_ch_T0000699;gene_id=HG03009_ch_G0000263;Parent=HG03009_ch_T0000699;transcript_name=hg002_chrY_paternal_612.1;gene_name=LOC107987350;ID=intron:HG03009_ch_T0000699:1;Name=LOC107987350;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	27186989	27187444	.	-	.	source_transcript=hg002_chrY_paternal_612.1;source_transcript_name=hg002_chrY_paternal_612.1;source_gene=hg002_chrY_paternal_612;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_612;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_612.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_612.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_612.1;transcript_id=HG03009_ch_T0000699;gene_id=HG03009_ch_G0000263;Parent=HG03009_ch_T0000699;transcript_name=hg002_chrY_paternal_612.1;gene_name=LOC107987350;ID=exon:HG03009_ch_T0000699:2;Name=LOC107987350;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	27174339	27187444	1000	-	.	source_transcript=hg002_chrY_paternal_612.2;source_transcript_name=hg002_chrY_paternal_612.1;source_gene=hg002_chrY_paternal_612;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_612;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_612.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_612.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_612.2;transcript_id=HG03009_ch_T0000700;gene_id=HG03009_ch_G0000263;Parent=HG03009_ch_G0000263;transcript_name=hg002_chrY_paternal_612.1;gene_name=LOC107987350;ID=HG03009_ch_T0000700;Name=LOC107987350
HG03009_chrY	CAT	exon	27174339	27178212	.	-	.	source_transcript=hg002_chrY_paternal_612.2;source_transcript_name=hg002_chrY_paternal_612.1;source_gene=hg002_chrY_paternal_612;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_612;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_612.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_612.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_612.2;transcript_id=HG03009_ch_T0000700;gene_id=HG03009_ch_G0000263;Parent=HG03009_ch_T0000700;transcript_name=hg002_chrY_paternal_612.1;gene_name=LOC107987350;ID=exon:HG03009_ch_T0000700:0;Name=LOC107987350;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	27178213	27178853	.	-	.	source_transcript=hg002_chrY_paternal_612.2;source_transcript_name=hg002_chrY_paternal_612.1;source_gene=hg002_chrY_paternal_612;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_612;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_612.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_612.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_612.2;transcript_id=HG03009_ch_T0000700;gene_id=HG03009_ch_G0000263;Parent=HG03009_ch_T0000700;transcript_name=hg002_chrY_paternal_612.1;gene_name=LOC107987350;ID=intron:HG03009_ch_T0000700:0;Name=LOC107987350;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	27178854	27181486	.	-	.	source_transcript=hg002_chrY_paternal_612.2;source_transcript_name=hg002_chrY_paternal_612.1;source_gene=hg002_chrY_paternal_612;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_612;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_612.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_612.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_612.2;transcript_id=HG03009_ch_T0000700;gene_id=HG03009_ch_G0000263;Parent=HG03009_ch_T0000700;transcript_name=hg002_chrY_paternal_612.1;gene_name=LOC107987350;ID=exon:HG03009_ch_T0000700:1;Name=LOC107987350;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	27181487	27186988	.	-	.	source_transcript=hg002_chrY_paternal_612.2;source_transcript_name=hg002_chrY_paternal_612.1;source_gene=hg002_chrY_paternal_612;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_612;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_612.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_612.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_612.2;transcript_id=HG03009_ch_T0000700;gene_id=HG03009_ch_G0000263;Parent=HG03009_ch_T0000700;transcript_name=hg002_chrY_paternal_612.1;gene_name=LOC107987350;ID=intron:HG03009_ch_T0000700:1;Name=LOC107987350;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	27186989	27187444	.	-	.	source_transcript=hg002_chrY_paternal_612.2;source_transcript_name=hg002_chrY_paternal_612.1;source_gene=hg002_chrY_paternal_612;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_612;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_612.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_612.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_612.2;transcript_id=HG03009_ch_T0000700;gene_id=HG03009_ch_G0000263;Parent=HG03009_ch_T0000700;transcript_name=hg002_chrY_paternal_612.1;gene_name=LOC107987350;ID=exon:HG03009_ch_T0000700:2;Name=LOC107987350;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	27276210	27277843	.	-	.	source_gene_common_name=LOC101928626;source_gene=hg002_chrY_paternal_615;alternative_source_transcripts=hg002_chrY_paternal_615.1;gene_id=HG03009_ch_G0000264;gene_biotype=lncRNA;gene_name=LOC101928626;gene_sources=liftoff;ID=HG03009_ch_G0000264;Name=LOC101928626
HG03009_chrY	CAT	transcript	27276210	27277843	1000	-	.	source_transcript=hg002_chrY_paternal_615.1;source_transcript_name=hg002_chrY_paternal_615.1;source_gene=hg002_chrY_paternal_615;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_615;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_615.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_615.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928626;alternative_source_transcripts=hg002_chrY_paternal_615.1;transcript_id=HG03009_ch_T0000701;gene_id=HG03009_ch_G0000264;Parent=HG03009_ch_G0000264;transcript_name=hg002_chrY_paternal_615.1;gene_name=LOC101928626;ID=HG03009_ch_T0000701;Name=LOC101928626
HG03009_chrY	CAT	exon	27276210	27276653	.	-	.	source_transcript=hg002_chrY_paternal_615.1;source_transcript_name=hg002_chrY_paternal_615.1;source_gene=hg002_chrY_paternal_615;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_615;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_615.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_615.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928626;alternative_source_transcripts=hg002_chrY_paternal_615.1;transcript_id=HG03009_ch_T0000701;gene_id=HG03009_ch_G0000264;Parent=HG03009_ch_T0000701;transcript_name=hg002_chrY_paternal_615.1;gene_name=LOC101928626;ID=exon:HG03009_ch_T0000701:0;Name=LOC101928626;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	27276654	27276790	.	-	.	source_transcript=hg002_chrY_paternal_615.1;source_transcript_name=hg002_chrY_paternal_615.1;source_gene=hg002_chrY_paternal_615;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_615;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_615.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_615.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928626;alternative_source_transcripts=hg002_chrY_paternal_615.1;transcript_id=HG03009_ch_T0000701;gene_id=HG03009_ch_G0000264;Parent=HG03009_ch_T0000701;transcript_name=hg002_chrY_paternal_615.1;gene_name=LOC101928626;ID=intron:HG03009_ch_T0000701:0;Name=LOC101928626;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	27276791	27277057	.	-	.	source_transcript=hg002_chrY_paternal_615.1;source_transcript_name=hg002_chrY_paternal_615.1;source_gene=hg002_chrY_paternal_615;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_615;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_615.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_615.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928626;alternative_source_transcripts=hg002_chrY_paternal_615.1;transcript_id=HG03009_ch_T0000701;gene_id=HG03009_ch_G0000264;Parent=HG03009_ch_T0000701;transcript_name=hg002_chrY_paternal_615.1;gene_name=LOC101928626;ID=exon:HG03009_ch_T0000701:1;Name=LOC101928626;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	27277058	27277752	.	-	.	source_transcript=hg002_chrY_paternal_615.1;source_transcript_name=hg002_chrY_paternal_615.1;source_gene=hg002_chrY_paternal_615;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_615;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_615.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_615.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928626;alternative_source_transcripts=hg002_chrY_paternal_615.1;transcript_id=HG03009_ch_T0000701;gene_id=HG03009_ch_G0000264;Parent=HG03009_ch_T0000701;transcript_name=hg002_chrY_paternal_615.1;gene_name=LOC101928626;ID=intron:HG03009_ch_T0000701:1;Name=LOC101928626;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	27277753	27277843	.	-	.	source_transcript=hg002_chrY_paternal_615.1;source_transcript_name=hg002_chrY_paternal_615.1;source_gene=hg002_chrY_paternal_615;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_615;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_615.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_615.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928626;alternative_source_transcripts=hg002_chrY_paternal_615.1;transcript_id=HG03009_ch_T0000701;gene_id=HG03009_ch_G0000264;Parent=HG03009_ch_T0000701;transcript_name=hg002_chrY_paternal_615.1;gene_name=LOC101928626;ID=exon:HG03009_ch_T0000701:2;Name=LOC101928626;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	27285724	27296718	.	+	.	source_gene_common_name=LOC107987240;source_gene=hg002_chrY_paternal_616;alternative_source_transcripts=hg002_chrY_paternal_616.1;gene_id=HG03009_ch_G0000265;gene_biotype=lncRNA;gene_name=LOC107987240;gene_sources=liftoff;ID=HG03009_ch_G0000265;Name=LOC107987240
HG03009_chrY	CAT	transcript	27285724	27296718	1000	+	.	source_transcript=hg002_chrY_paternal_616.1;source_transcript_name=hg002_chrY_paternal_616.1;source_gene=hg002_chrY_paternal_616;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_616;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_616.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_616.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987240;alternative_source_transcripts=hg002_chrY_paternal_616.1;transcript_id=HG03009_ch_T0000702;gene_id=HG03009_ch_G0000265;Parent=HG03009_ch_G0000265;transcript_name=hg002_chrY_paternal_616.1;gene_name=LOC107987240;ID=HG03009_ch_T0000702;Name=LOC107987240
HG03009_chrY	CAT	exon	27285724	27285955	.	+	.	source_transcript=hg002_chrY_paternal_616.1;source_transcript_name=hg002_chrY_paternal_616.1;source_gene=hg002_chrY_paternal_616;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_616;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_616.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_616.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987240;alternative_source_transcripts=hg002_chrY_paternal_616.1;transcript_id=HG03009_ch_T0000702;gene_id=HG03009_ch_G0000265;Parent=HG03009_ch_T0000702;transcript_name=hg002_chrY_paternal_616.1;gene_name=LOC107987240;ID=exon:HG03009_ch_T0000702:0;Name=LOC107987240;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	27285956	27295744	.	+	.	source_transcript=hg002_chrY_paternal_616.1;source_transcript_name=hg002_chrY_paternal_616.1;source_gene=hg002_chrY_paternal_616;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_616;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_616.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_616.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987240;alternative_source_transcripts=hg002_chrY_paternal_616.1;transcript_id=HG03009_ch_T0000702;gene_id=HG03009_ch_G0000265;Parent=HG03009_ch_T0000702;transcript_name=hg002_chrY_paternal_616.1;gene_name=LOC107987240;ID=intron:HG03009_ch_T0000702:0;Name=LOC107987240;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	27295745	27295851	.	+	.	source_transcript=hg002_chrY_paternal_616.1;source_transcript_name=hg002_chrY_paternal_616.1;source_gene=hg002_chrY_paternal_616;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_616;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_616.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_616.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987240;alternative_source_transcripts=hg002_chrY_paternal_616.1;transcript_id=HG03009_ch_T0000702;gene_id=HG03009_ch_G0000265;Parent=HG03009_ch_T0000702;transcript_name=hg002_chrY_paternal_616.1;gene_name=LOC107987240;ID=exon:HG03009_ch_T0000702:1;Name=LOC107987240;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	27295852	27296060	.	+	.	source_transcript=hg002_chrY_paternal_616.1;source_transcript_name=hg002_chrY_paternal_616.1;source_gene=hg002_chrY_paternal_616;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_616;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_616.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_616.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987240;alternative_source_transcripts=hg002_chrY_paternal_616.1;transcript_id=HG03009_ch_T0000702;gene_id=HG03009_ch_G0000265;Parent=HG03009_ch_T0000702;transcript_name=hg002_chrY_paternal_616.1;gene_name=LOC107987240;ID=intron:HG03009_ch_T0000702:1;Name=LOC107987240;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	27296061	27296718	.	+	.	source_transcript=hg002_chrY_paternal_616.1;source_transcript_name=hg002_chrY_paternal_616.1;source_gene=hg002_chrY_paternal_616;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_616;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_616.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_616.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987240;alternative_source_transcripts=hg002_chrY_paternal_616.1;transcript_id=HG03009_ch_T0000702;gene_id=HG03009_ch_G0000265;Parent=HG03009_ch_T0000702;transcript_name=hg002_chrY_paternal_616.1;gene_name=LOC107987240;ID=exon:HG03009_ch_T0000702:2;Name=LOC107987240;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	27315585	27332005	.	-	.	source_gene_common_name=SEPTIN14P23;source_gene=hg002_chrY_paternal_617;alternative_source_transcripts=hg002_chrY_paternal_617.1;gene_id=HG03009_ch_G0000266;gene_biotype=transcribed_pseudogene;gene_name=SEPTIN14P23;gene_sources=liftoff;ID=HG03009_ch_G0000266;Name=SEPTIN14P23
HG03009_chrY	CAT	transcript	27315585	27332005	1000	-	.	source_transcript=hg002_chrY_paternal_617.1;source_transcript_name=hg002_chrY_paternal_617.1;source_gene=hg002_chrY_paternal_617;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_617;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_617.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_617.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SEPTIN14P23;alternative_source_transcripts=hg002_chrY_paternal_617.1;transcript_id=HG03009_ch_T0000703;gene_id=HG03009_ch_G0000266;Parent=HG03009_ch_G0000266;transcript_name=hg002_chrY_paternal_617.1;gene_name=SEPTIN14P23;ID=HG03009_ch_T0000703;Name=SEPTIN14P23
HG03009_chrY	CAT	exon	27315585	27316163	.	-	.	source_transcript=hg002_chrY_paternal_617.1;source_transcript_name=hg002_chrY_paternal_617.1;source_gene=hg002_chrY_paternal_617;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_617;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_617.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_617.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SEPTIN14P23;alternative_source_transcripts=hg002_chrY_paternal_617.1;transcript_id=HG03009_ch_T0000703;gene_id=HG03009_ch_G0000266;Parent=HG03009_ch_T0000703;transcript_name=hg002_chrY_paternal_617.1;gene_name=SEPTIN14P23;ID=exon:HG03009_ch_T0000703:0;Name=SEPTIN14P23;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	27316164	27324201	.	-	.	source_transcript=hg002_chrY_paternal_617.1;source_transcript_name=hg002_chrY_paternal_617.1;source_gene=hg002_chrY_paternal_617;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_617;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_617.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_617.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SEPTIN14P23;alternative_source_transcripts=hg002_chrY_paternal_617.1;transcript_id=HG03009_ch_T0000703;gene_id=HG03009_ch_G0000266;Parent=HG03009_ch_T0000703;transcript_name=hg002_chrY_paternal_617.1;gene_name=SEPTIN14P23;ID=intron:HG03009_ch_T0000703:0;Name=SEPTIN14P23;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	27324202	27324370	.	-	.	source_transcript=hg002_chrY_paternal_617.1;source_transcript_name=hg002_chrY_paternal_617.1;source_gene=hg002_chrY_paternal_617;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_617;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_617.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_617.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SEPTIN14P23;alternative_source_transcripts=hg002_chrY_paternal_617.1;transcript_id=HG03009_ch_T0000703;gene_id=HG03009_ch_G0000266;Parent=HG03009_ch_T0000703;transcript_name=hg002_chrY_paternal_617.1;gene_name=SEPTIN14P23;ID=exon:HG03009_ch_T0000703:1;Name=SEPTIN14P23;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	27324371	27331911	.	-	.	source_transcript=hg002_chrY_paternal_617.1;source_transcript_name=hg002_chrY_paternal_617.1;source_gene=hg002_chrY_paternal_617;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_617;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_617.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_617.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SEPTIN14P23;alternative_source_transcripts=hg002_chrY_paternal_617.1;transcript_id=HG03009_ch_T0000703;gene_id=HG03009_ch_G0000266;Parent=HG03009_ch_T0000703;transcript_name=hg002_chrY_paternal_617.1;gene_name=SEPTIN14P23;ID=intron:HG03009_ch_T0000703:1;Name=SEPTIN14P23;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	27331912	27332005	.	-	.	source_transcript=hg002_chrY_paternal_617.1;source_transcript_name=hg002_chrY_paternal_617.1;source_gene=hg002_chrY_paternal_617;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_617;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_617.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_617.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SEPTIN14P23;alternative_source_transcripts=hg002_chrY_paternal_617.1;transcript_id=HG03009_ch_T0000703;gene_id=HG03009_ch_G0000266;Parent=HG03009_ch_T0000703;transcript_name=hg002_chrY_paternal_617.1;gene_name=SEPTIN14P23;ID=exon:HG03009_ch_T0000703:2;Name=SEPTIN14P23;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	27392597	27397462	.	+	.	source_gene_common_name=GOLGA2P2Y;source_gene=hg002_chrY_paternal_550;alternative_source_transcripts=hg002_chrY_paternal_624.1;gene_id=HG03009_ch_G0000267;gene_biotype=transcribed_pseudogene;gene_name=GOLGA2P2Y;gene_sources=liftoff;ID=HG03009_ch_G0000267;Name=GOLGA2P2Y
HG03009_chrY	CAT	transcript	27392597	27397462	1000	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=HG03009_ch_T0000704;gene_id=HG03009_ch_G0000267;Parent=HG03009_ch_G0000267;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=HG03009_ch_T0000704;Name=GOLGA2P2Y
HG03009_chrY	CAT	exon	27392597	27392639	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=HG03009_ch_T0000704;gene_id=HG03009_ch_G0000267;Parent=HG03009_ch_T0000704;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=exon:HG03009_ch_T0000704:0;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	27392640	27392825	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=HG03009_ch_T0000704;gene_id=HG03009_ch_G0000267;Parent=HG03009_ch_T0000704;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=intron:HG03009_ch_T0000704:0;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	27392826	27392904	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=HG03009_ch_T0000704;gene_id=HG03009_ch_G0000267;Parent=HG03009_ch_T0000704;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=exon:HG03009_ch_T0000704:1;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	27392905	27394024	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=HG03009_ch_T0000704;gene_id=HG03009_ch_G0000267;Parent=HG03009_ch_T0000704;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=intron:HG03009_ch_T0000704:1;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	27394025	27394376	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=HG03009_ch_T0000704;gene_id=HG03009_ch_G0000267;Parent=HG03009_ch_T0000704;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=exon:HG03009_ch_T0000704:2;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	27394377	27394672	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=HG03009_ch_T0000704;gene_id=HG03009_ch_G0000267;Parent=HG03009_ch_T0000704;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=intron:HG03009_ch_T0000704:2;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	27394673	27394730	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=HG03009_ch_T0000704;gene_id=HG03009_ch_G0000267;Parent=HG03009_ch_T0000704;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=exon:HG03009_ch_T0000704:3;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	27394731	27396086	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=HG03009_ch_T0000704;gene_id=HG03009_ch_G0000267;Parent=HG03009_ch_T0000704;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=intron:HG03009_ch_T0000704:3;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	27396087	27396161	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=HG03009_ch_T0000704;gene_id=HG03009_ch_G0000267;Parent=HG03009_ch_T0000704;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=exon:HG03009_ch_T0000704:4;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	27396162	27396581	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=HG03009_ch_T0000704;gene_id=HG03009_ch_G0000267;Parent=HG03009_ch_T0000704;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=intron:HG03009_ch_T0000704:4;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	27396582	27396670	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=HG03009_ch_T0000704;gene_id=HG03009_ch_G0000267;Parent=HG03009_ch_T0000704;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=exon:HG03009_ch_T0000704:5;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	27396671	27396925	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=HG03009_ch_T0000704;gene_id=HG03009_ch_G0000267;Parent=HG03009_ch_T0000704;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=intron:HG03009_ch_T0000704:5;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	27396926	27397114	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=HG03009_ch_T0000704;gene_id=HG03009_ch_G0000267;Parent=HG03009_ch_T0000704;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=exon:HG03009_ch_T0000704:6;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	27397115	27397203	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=HG03009_ch_T0000704;gene_id=HG03009_ch_G0000267;Parent=HG03009_ch_T0000704;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=intron:HG03009_ch_T0000704:6;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	27397204	27397296	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=HG03009_ch_T0000704;gene_id=HG03009_ch_G0000267;Parent=HG03009_ch_T0000704;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=exon:HG03009_ch_T0000704:7;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	27397297	27397378	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=HG03009_ch_T0000704;gene_id=HG03009_ch_G0000267;Parent=HG03009_ch_T0000704;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=intron:HG03009_ch_T0000704:7;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	27397379	27397462	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=HG03009_ch_T0000704;gene_id=HG03009_ch_G0000267;Parent=HG03009_ch_T0000704;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=exon:HG03009_ch_T0000704:8;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	27399461	27400991	.	-	.	source_gene_common_name=LOC102724034;source_gene=hg002_chrY_paternal_552;alternative_source_transcripts=hg002_chrY_paternal_626.1;gene_id=HG03009_ch_G0000268;gene_biotype=lncRNA;gene_name=LOC102724034;gene_sources=liftoff;ID=HG03009_ch_G0000268;Name=LOC102724034
HG03009_chrY	CAT	transcript	27399461	27400991	1000	-	.	source_transcript=hg002_chrY_paternal_552.1;source_transcript_name=hg002_chrY_paternal_552.1;source_gene=hg002_chrY_paternal_552;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_552;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_552.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_552.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724034;alternative_source_transcripts=hg002_chrY_paternal_626.1;transcript_id=HG03009_ch_T0000705;gene_id=HG03009_ch_G0000268;Parent=HG03009_ch_G0000268;transcript_name=hg002_chrY_paternal_552.1;gene_name=LOC102724034;ID=HG03009_ch_T0000705;Name=LOC102724034
HG03009_chrY	CAT	exon	27399461	27399884	.	-	.	source_transcript=hg002_chrY_paternal_552.1;source_transcript_name=hg002_chrY_paternal_552.1;source_gene=hg002_chrY_paternal_552;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_552;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_552.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_552.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724034;alternative_source_transcripts=hg002_chrY_paternal_626.1;transcript_id=HG03009_ch_T0000705;gene_id=HG03009_ch_G0000268;Parent=HG03009_ch_T0000705;transcript_name=hg002_chrY_paternal_552.1;gene_name=LOC102724034;ID=exon:HG03009_ch_T0000705:0;Name=LOC102724034;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	27399885	27400152	.	-	.	source_transcript=hg002_chrY_paternal_552.1;source_transcript_name=hg002_chrY_paternal_552.1;source_gene=hg002_chrY_paternal_552;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_552;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_552.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_552.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724034;alternative_source_transcripts=hg002_chrY_paternal_626.1;transcript_id=HG03009_ch_T0000705;gene_id=HG03009_ch_G0000268;Parent=HG03009_ch_T0000705;transcript_name=hg002_chrY_paternal_552.1;gene_name=LOC102724034;ID=intron:HG03009_ch_T0000705:0;Name=LOC102724034;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	27400153	27400277	.	-	.	source_transcript=hg002_chrY_paternal_552.1;source_transcript_name=hg002_chrY_paternal_552.1;source_gene=hg002_chrY_paternal_552;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_552;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_552.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_552.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724034;alternative_source_transcripts=hg002_chrY_paternal_626.1;transcript_id=HG03009_ch_T0000705;gene_id=HG03009_ch_G0000268;Parent=HG03009_ch_T0000705;transcript_name=hg002_chrY_paternal_552.1;gene_name=LOC102724034;ID=exon:HG03009_ch_T0000705:1;Name=LOC102724034;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	27400278	27400965	.	-	.	source_transcript=hg002_chrY_paternal_552.1;source_transcript_name=hg002_chrY_paternal_552.1;source_gene=hg002_chrY_paternal_552;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_552;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_552.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_552.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724034;alternative_source_transcripts=hg002_chrY_paternal_626.1;transcript_id=HG03009_ch_T0000705;gene_id=HG03009_ch_G0000268;Parent=HG03009_ch_T0000705;transcript_name=hg002_chrY_paternal_552.1;gene_name=LOC102724034;ID=intron:HG03009_ch_T0000705:1;Name=LOC102724034;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	27400966	27400991	.	-	.	source_transcript=hg002_chrY_paternal_552.1;source_transcript_name=hg002_chrY_paternal_552.1;source_gene=hg002_chrY_paternal_552;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_552;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_552.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_552.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724034;alternative_source_transcripts=hg002_chrY_paternal_626.1;transcript_id=HG03009_ch_T0000705;gene_id=HG03009_ch_G0000268;Parent=HG03009_ch_T0000705;transcript_name=hg002_chrY_paternal_552.1;gene_name=LOC102724034;ID=exon:HG03009_ch_T0000705:2;Name=LOC102724034;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	27420198	27423995	.	+	.	source_gene_common_name=CSPG4P1Y;source_gene=hg002_chrY_paternal_556;gene_id=HG03009_ch_G0000269;gene_biotype=transcribed_pseudogene;gene_name=CSPG4P1Y;gene_sources=liftoff;ID=HG03009_ch_G0000269;Name=CSPG4P1Y
HG03009_chrY	CAT	transcript	27420198	27423995	1000	+	.	source_transcript=hg002_chrY_paternal_556.1;source_transcript_name=hg002_chrY_paternal_556.1;source_gene=hg002_chrY_paternal_556;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_556;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_556.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_556.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P1Y;transcript_id=HG03009_ch_T0000706;gene_id=HG03009_ch_G0000269;Parent=HG03009_ch_G0000269;transcript_name=hg002_chrY_paternal_556.1;gene_name=CSPG4P1Y;ID=HG03009_ch_T0000706;Name=CSPG4P1Y
HG03009_chrY	CAT	exon	27420198	27420920	.	+	.	source_transcript=hg002_chrY_paternal_556.1;source_transcript_name=hg002_chrY_paternal_556.1;source_gene=hg002_chrY_paternal_556;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_556;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_556.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_556.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P1Y;transcript_id=HG03009_ch_T0000706;gene_id=HG03009_ch_G0000269;Parent=HG03009_ch_T0000706;transcript_name=hg002_chrY_paternal_556.1;gene_name=CSPG4P1Y;ID=exon:HG03009_ch_T0000706:0;Name=CSPG4P1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	27420921	27423923	.	+	.	source_transcript=hg002_chrY_paternal_556.1;source_transcript_name=hg002_chrY_paternal_556.1;source_gene=hg002_chrY_paternal_556;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_556;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_556.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_556.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P1Y;transcript_id=HG03009_ch_T0000706;gene_id=HG03009_ch_G0000269;Parent=HG03009_ch_T0000706;transcript_name=hg002_chrY_paternal_556.1;gene_name=CSPG4P1Y;ID=intron:HG03009_ch_T0000706:0;Name=CSPG4P1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	27423924	27423995	.	+	.	source_transcript=hg002_chrY_paternal_556.1;source_transcript_name=hg002_chrY_paternal_556.1;source_gene=hg002_chrY_paternal_556;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_556;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_556.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_556.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P1Y;transcript_id=HG03009_ch_T0000706;gene_id=HG03009_ch_G0000269;Parent=HG03009_ch_T0000706;transcript_name=hg002_chrY_paternal_556.1;gene_name=CSPG4P1Y;ID=exon:HG03009_ch_T0000706:1;Name=CSPG4P1Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	27559403	27562802	.	+	.	source_gene_common_name=CDY1B;source_gene=hg002_chrY_paternal_565;gene_id=HG03009_ch_G0000270;gene_biotype=protein_coding;gene_name=CDY1B;gene_sources=liftoff;ID=HG03009_ch_G0000270;Name=CDY1B
HG03009_chrY	CAT	transcript	27559403	27561629	100	+	.	source_transcript=hg002_chrY_paternal_565.1;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=HG03009_ch_T0000707;gene_id=HG03009_ch_G0000270;Parent=HG03009_ch_G0000270;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=HG03009_ch_T0000707;Name=CDY1B
HG03009_chrY	CAT	exon	27559403	27561629	.	+	.	source_transcript=hg002_chrY_paternal_565.1;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=HG03009_ch_T0000707;gene_id=HG03009_ch_G0000270;Parent=HG03009_ch_T0000707;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=exon:HG03009_ch_T0000707:0;Name=CDY1B;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	27559734	27561356	.	+	0	source_transcript=hg002_chrY_paternal_565.1;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=HG03009_ch_T0000707;gene_id=HG03009_ch_G0000270;Parent=HG03009_ch_T0000707;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=CDS:HG03009_ch_T0000707:0;Name=CDY1B;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	27559734	27559736	.	+	0	source_transcript=hg002_chrY_paternal_565.1;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=HG03009_ch_T0000707;gene_id=HG03009_ch_G0000270;Parent=HG03009_ch_T0000707;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=start_codon:HG03009_ch_T0000707;Name=CDY1B;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	27561354	27561356	.	+	0	source_transcript=hg002_chrY_paternal_565.1;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=HG03009_ch_T0000707;gene_id=HG03009_ch_G0000270;Parent=HG03009_ch_T0000707;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=stop_codon:HG03009_ch_T0000707;Name=CDY1B;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	27559408	27562193	100	+	.	source_transcript=hg002_chrY_paternal_565.2;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_638.3;transcript_id=HG03009_ch_T0000708;gene_id=HG03009_ch_G0000270;Parent=HG03009_ch_G0000270;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=HG03009_ch_T0000708;Name=CDY1B
HG03009_chrY	CAT	exon	27559408	27561325	.	+	.	source_transcript=hg002_chrY_paternal_565.2;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_638.3;transcript_id=HG03009_ch_T0000708;gene_id=HG03009_ch_G0000270;Parent=HG03009_ch_T0000708;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=exon:HG03009_ch_T0000708:0;Name=CDY1B;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	27559734	27561325	.	+	0	source_transcript=hg002_chrY_paternal_565.2;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_638.3;transcript_id=HG03009_ch_T0000708;gene_id=HG03009_ch_G0000270;Parent=HG03009_ch_T0000708;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=CDS:HG03009_ch_T0000708:0;Name=CDY1B;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	27559734	27559736	.	+	0	source_transcript=hg002_chrY_paternal_565.2;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_638.3;transcript_id=HG03009_ch_T0000708;gene_id=HG03009_ch_G0000270;Parent=HG03009_ch_T0000708;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=start_codon:HG03009_ch_T0000708;Name=CDY1B;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	27561326	27561745	.	+	.	source_transcript=hg002_chrY_paternal_565.2;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_638.3;transcript_id=HG03009_ch_T0000708;gene_id=HG03009_ch_G0000270;Parent=HG03009_ch_T0000708;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=intron:HG03009_ch_T0000708:0;Name=CDY1B;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	27561746	27562193	.	+	.	source_transcript=hg002_chrY_paternal_565.2;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_638.3;transcript_id=HG03009_ch_T0000708;gene_id=HG03009_ch_G0000270;Parent=HG03009_ch_T0000708;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=exon:HG03009_ch_T0000708:1;Name=CDY1B;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	27561746	27561818	.	+	1	source_transcript=hg002_chrY_paternal_565.2;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_638.3;transcript_id=HG03009_ch_T0000708;gene_id=HG03009_ch_G0000270;Parent=HG03009_ch_T0000708;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=CDS:HG03009_ch_T0000708:1;Name=CDY1B;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	27561816	27561818	.	+	0	source_transcript=hg002_chrY_paternal_565.2;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_638.3;transcript_id=HG03009_ch_T0000708;gene_id=HG03009_ch_G0000270;Parent=HG03009_ch_T0000708;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=stop_codon:HG03009_ch_T0000708;Name=CDY1B;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	27559408	27562802	1000	+	.	source_transcript=hg002_chrY_paternal_565.3;source_transcript_name=hg002_chrY_paternal_565.1;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_565.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_638.4;transcript_id=HG03009_ch_T0000709;gene_id=HG03009_ch_G0000270;Parent=HG03009_ch_G0000270;transcript_name=hg002_chrY_paternal_565.1;gene_name=CDY1B;ID=HG03009_ch_T0000709;Name=CDY1B
HG03009_chrY	CAT	exon	27559408	27561325	.	+	.	source_transcript=hg002_chrY_paternal_565.3;source_transcript_name=hg002_chrY_paternal_565.1;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_565.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_638.4;transcript_id=HG03009_ch_T0000709;gene_id=HG03009_ch_G0000270;Parent=HG03009_ch_T0000709;transcript_name=hg002_chrY_paternal_565.1;gene_name=CDY1B;ID=exon:HG03009_ch_T0000709:0;Name=CDY1B;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	27561326	27561745	.	+	.	source_transcript=hg002_chrY_paternal_565.3;source_transcript_name=hg002_chrY_paternal_565.1;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_565.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_638.4;transcript_id=HG03009_ch_T0000709;gene_id=HG03009_ch_G0000270;Parent=HG03009_ch_T0000709;transcript_name=hg002_chrY_paternal_565.1;gene_name=CDY1B;ID=intron:HG03009_ch_T0000709:0;Name=CDY1B;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	27561746	27561945	.	+	.	source_transcript=hg002_chrY_paternal_565.3;source_transcript_name=hg002_chrY_paternal_565.1;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_565.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_638.4;transcript_id=HG03009_ch_T0000709;gene_id=HG03009_ch_G0000270;Parent=HG03009_ch_T0000709;transcript_name=hg002_chrY_paternal_565.1;gene_name=CDY1B;ID=exon:HG03009_ch_T0000709:1;Name=CDY1B;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	27561946	27562720	.	+	.	source_transcript=hg002_chrY_paternal_565.3;source_transcript_name=hg002_chrY_paternal_565.1;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_565.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_638.4;transcript_id=HG03009_ch_T0000709;gene_id=HG03009_ch_G0000270;Parent=HG03009_ch_T0000709;transcript_name=hg002_chrY_paternal_565.1;gene_name=CDY1B;ID=intron:HG03009_ch_T0000709:1;Name=CDY1B;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	27562721	27562802	.	+	.	source_transcript=hg002_chrY_paternal_565.3;source_transcript_name=hg002_chrY_paternal_565.1;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_565.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_638.4;transcript_id=HG03009_ch_T0000709;gene_id=HG03009_ch_G0000270;Parent=HG03009_ch_T0000709;transcript_name=hg002_chrY_paternal_565.1;gene_name=CDY1B;ID=exon:HG03009_ch_T0000709:2;Name=CDY1B;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	27559416	27562193	100	+	.	source_transcript=hg002_chrY_paternal_565.4;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=HG03009_ch_T0000710;gene_id=HG03009_ch_G0000270;Parent=HG03009_ch_G0000270;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=HG03009_ch_T0000710;Name=CDY1B
HG03009_chrY	CAT	exon	27559416	27561125	.	+	.	source_transcript=hg002_chrY_paternal_565.4;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=HG03009_ch_T0000710;gene_id=HG03009_ch_G0000270;Parent=HG03009_ch_T0000710;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=exon:HG03009_ch_T0000710:0;Name=CDY1B;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	27559734	27561125	.	+	0	source_transcript=hg002_chrY_paternal_565.4;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=HG03009_ch_T0000710;gene_id=HG03009_ch_G0000270;Parent=HG03009_ch_T0000710;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=CDS:HG03009_ch_T0000710:0;Name=CDY1B;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	27559734	27559736	.	+	0	source_transcript=hg002_chrY_paternal_565.4;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=HG03009_ch_T0000710;gene_id=HG03009_ch_G0000270;Parent=HG03009_ch_T0000710;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=start_codon:HG03009_ch_T0000710;Name=CDY1B;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	27561126	27561745	.	+	.	source_transcript=hg002_chrY_paternal_565.4;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=HG03009_ch_T0000710;gene_id=HG03009_ch_G0000270;Parent=HG03009_ch_T0000710;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=intron:HG03009_ch_T0000710:0;Name=CDY1B;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	27561746	27562193	.	+	.	source_transcript=hg002_chrY_paternal_565.4;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=HG03009_ch_T0000710;gene_id=HG03009_ch_G0000270;Parent=HG03009_ch_T0000710;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=exon:HG03009_ch_T0000710:1;Name=CDY1B;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	27561746	27561766	.	+	0	source_transcript=hg002_chrY_paternal_565.4;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=HG03009_ch_T0000710;gene_id=HG03009_ch_G0000270;Parent=HG03009_ch_T0000710;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=CDS:HG03009_ch_T0000710:1;Name=CDY1B;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	27561764	27561766	.	+	0	source_transcript=hg002_chrY_paternal_565.4;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=HG03009_ch_T0000710;gene_id=HG03009_ch_G0000270;Parent=HG03009_ch_T0000710;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=stop_codon:HG03009_ch_T0000710;Name=CDY1B;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	27665785	27670680	.	+	.	source_gene_common_name=TTTY3B;source_gene=hg002_chrY_paternal_645;alternative_source_transcripts=hg002_chrY_paternal_645.1;gene_id=HG03009_ch_G0000271;gene_biotype=lncRNA;gene_name=TTTY3B;gene_sources=liftoff;ID=HG03009_ch_G0000271;Name=TTTY3B
HG03009_chrY	CAT	transcript	27665785	27670680	1000	+	.	source_transcript=hg002_chrY_paternal_645.1;source_transcript_name=hg002_chrY_paternal_645.1;source_gene=hg002_chrY_paternal_645;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_645;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_645.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_645.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3B;alternative_source_transcripts=hg002_chrY_paternal_645.1;transcript_id=HG03009_ch_T0000711;gene_id=HG03009_ch_G0000271;Parent=HG03009_ch_G0000271;transcript_name=hg002_chrY_paternal_645.1;gene_name=TTTY3B;ID=HG03009_ch_T0000711;Name=TTTY3B
HG03009_chrY	CAT	exon	27665785	27665888	.	+	.	source_transcript=hg002_chrY_paternal_645.1;source_transcript_name=hg002_chrY_paternal_645.1;source_gene=hg002_chrY_paternal_645;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_645;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_645.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3B;alternative_source_transcripts=hg002_chrY_paternal_645.1;transcript_id=HG03009_ch_T0000711;gene_id=HG03009_ch_G0000271;Parent=HG03009_ch_T0000711;transcript_name=hg002_chrY_paternal_645.1;gene_name=TTTY3B;ID=exon:HG03009_ch_T0000711:0;Name=TTTY3B;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	27665889	27668086	.	+	.	source_transcript=hg002_chrY_paternal_645.1;source_transcript_name=hg002_chrY_paternal_645.1;source_gene=hg002_chrY_paternal_645;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_645;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_645.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3B;alternative_source_transcripts=hg002_chrY_paternal_645.1;transcript_id=HG03009_ch_T0000711;gene_id=HG03009_ch_G0000271;Parent=HG03009_ch_T0000711;transcript_name=hg002_chrY_paternal_645.1;gene_name=TTTY3B;ID=intron:HG03009_ch_T0000711:0;Name=TTTY3B;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	27668087	27668221	.	+	.	source_transcript=hg002_chrY_paternal_645.1;source_transcript_name=hg002_chrY_paternal_645.1;source_gene=hg002_chrY_paternal_645;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_645;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_645.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3B;alternative_source_transcripts=hg002_chrY_paternal_645.1;transcript_id=HG03009_ch_T0000711;gene_id=HG03009_ch_G0000271;Parent=HG03009_ch_T0000711;transcript_name=hg002_chrY_paternal_645.1;gene_name=TTTY3B;ID=exon:HG03009_ch_T0000711:1;Name=TTTY3B;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	27668222	27670575	.	+	.	source_transcript=hg002_chrY_paternal_645.1;source_transcript_name=hg002_chrY_paternal_645.1;source_gene=hg002_chrY_paternal_645;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_645;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_645.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3B;alternative_source_transcripts=hg002_chrY_paternal_645.1;transcript_id=HG03009_ch_T0000711;gene_id=HG03009_ch_G0000271;Parent=HG03009_ch_T0000711;transcript_name=hg002_chrY_paternal_645.1;gene_name=TTTY3B;ID=intron:HG03009_ch_T0000711:1;Name=TTTY3B;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	27670576	27670680	.	+	.	source_transcript=hg002_chrY_paternal_645.1;source_transcript_name=hg002_chrY_paternal_645.1;source_gene=hg002_chrY_paternal_645;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_645;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_645.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3B;alternative_source_transcripts=hg002_chrY_paternal_645.1;transcript_id=HG03009_ch_T0000711;gene_id=HG03009_ch_G0000271;Parent=HG03009_ch_T0000711;transcript_name=hg002_chrY_paternal_645.1;gene_name=TTTY3B;ID=exon:HG03009_ch_T0000711:2;Name=TTTY3B;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	27966599	27969723	.	-	.	source_gene_common_name=LOC107987352;source_gene=hg002_chrY_paternal_665;alternative_source_transcripts=hg002_chrY_paternal_665.1;gene_id=HG03009_ch_G0000272;gene_biotype=lncRNA;gene_name=LOC107987352;gene_sources=liftoff;ID=HG03009_ch_G0000272;Name=LOC107987352
HG03009_chrY	CAT	transcript	27966599	27969723	1000	-	.	source_transcript=hg002_chrY_paternal_665.1;source_transcript_name=hg002_chrY_paternal_665.1;source_gene=hg002_chrY_paternal_665;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_665;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_665.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_665.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987352;alternative_source_transcripts=hg002_chrY_paternal_665.1;transcript_id=HG03009_ch_T0000712;gene_id=HG03009_ch_G0000272;Parent=HG03009_ch_G0000272;transcript_name=hg002_chrY_paternal_665.1;gene_name=LOC107987352;ID=HG03009_ch_T0000712;Name=LOC107987352
HG03009_chrY	CAT	exon	27966599	27967927	.	-	.	source_transcript=hg002_chrY_paternal_665.1;source_transcript_name=hg002_chrY_paternal_665.1;source_gene=hg002_chrY_paternal_665;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_665;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_665.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987352;alternative_source_transcripts=hg002_chrY_paternal_665.1;transcript_id=HG03009_ch_T0000712;gene_id=HG03009_ch_G0000272;Parent=HG03009_ch_T0000712;transcript_name=hg002_chrY_paternal_665.1;gene_name=LOC107987352;ID=exon:HG03009_ch_T0000712:0;Name=LOC107987352;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	27967928	27969462	.	-	.	source_transcript=hg002_chrY_paternal_665.1;source_transcript_name=hg002_chrY_paternal_665.1;source_gene=hg002_chrY_paternal_665;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_665;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_665.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987352;alternative_source_transcripts=hg002_chrY_paternal_665.1;transcript_id=HG03009_ch_T0000712;gene_id=HG03009_ch_G0000272;Parent=HG03009_ch_T0000712;transcript_name=hg002_chrY_paternal_665.1;gene_name=LOC107987352;ID=intron:HG03009_ch_T0000712:0;Name=LOC107987352;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	27969463	27969523	.	-	.	source_transcript=hg002_chrY_paternal_665.1;source_transcript_name=hg002_chrY_paternal_665.1;source_gene=hg002_chrY_paternal_665;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_665;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_665.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987352;alternative_source_transcripts=hg002_chrY_paternal_665.1;transcript_id=HG03009_ch_T0000712;gene_id=HG03009_ch_G0000272;Parent=HG03009_ch_T0000712;transcript_name=hg002_chrY_paternal_665.1;gene_name=LOC107987352;ID=exon:HG03009_ch_T0000712:1;Name=LOC107987352;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	27969524	27969640	.	-	.	source_transcript=hg002_chrY_paternal_665.1;source_transcript_name=hg002_chrY_paternal_665.1;source_gene=hg002_chrY_paternal_665;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_665;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_665.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987352;alternative_source_transcripts=hg002_chrY_paternal_665.1;transcript_id=HG03009_ch_T0000712;gene_id=HG03009_ch_G0000272;Parent=HG03009_ch_T0000712;transcript_name=hg002_chrY_paternal_665.1;gene_name=LOC107987352;ID=intron:HG03009_ch_T0000712:1;Name=LOC107987352;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	27969641	27969723	.	-	.	source_transcript=hg002_chrY_paternal_665.1;source_transcript_name=hg002_chrY_paternal_665.1;source_gene=hg002_chrY_paternal_665;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_665;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_665.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987352;alternative_source_transcripts=hg002_chrY_paternal_665.1;transcript_id=HG03009_ch_T0000712;gene_id=HG03009_ch_G0000272;Parent=HG03009_ch_T0000712;transcript_name=hg002_chrY_paternal_665.1;gene_name=LOC107987352;ID=exon:HG03009_ch_T0000712:2;Name=LOC107987352;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	28130634	28172138	.	-	.	source_gene_common_name=REREP2Y;source_gene=hg002_chrY_paternal_668;alternative_source_transcripts=hg002_chrY_paternal_668.1;gene_id=HG03009_ch_G0000273;gene_biotype=transcribed_pseudogene;gene_name=REREP2Y;gene_sources=liftoff;ID=HG03009_ch_G0000273;Name=REREP2Y
HG03009_chrY	CAT	transcript	28130634	28172138	1000	-	.	source_transcript=hg002_chrY_paternal_668.1;source_transcript_name=hg002_chrY_paternal_668.1;source_gene=hg002_chrY_paternal_668;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_668;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_668.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_668.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP2Y;alternative_source_transcripts=hg002_chrY_paternal_668.1;transcript_id=HG03009_ch_T0000713;gene_id=HG03009_ch_G0000273;Parent=HG03009_ch_G0000273;transcript_name=hg002_chrY_paternal_668.1;gene_name=REREP2Y;ID=HG03009_ch_T0000713;Name=REREP2Y
HG03009_chrY	CAT	exon	28130634	28135223	.	-	.	source_transcript=hg002_chrY_paternal_668.1;source_transcript_name=hg002_chrY_paternal_668.1;source_gene=hg002_chrY_paternal_668;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_668;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_668.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_668.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP2Y;alternative_source_transcripts=hg002_chrY_paternal_668.1;transcript_id=HG03009_ch_T0000713;gene_id=HG03009_ch_G0000273;Parent=HG03009_ch_T0000713;transcript_name=hg002_chrY_paternal_668.1;gene_name=REREP2Y;ID=exon:HG03009_ch_T0000713:0;Name=REREP2Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	28135224	28144841	.	-	.	source_transcript=hg002_chrY_paternal_668.1;source_transcript_name=hg002_chrY_paternal_668.1;source_gene=hg002_chrY_paternal_668;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_668;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_668.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_668.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP2Y;alternative_source_transcripts=hg002_chrY_paternal_668.1;transcript_id=HG03009_ch_T0000713;gene_id=HG03009_ch_G0000273;Parent=HG03009_ch_T0000713;transcript_name=hg002_chrY_paternal_668.1;gene_name=REREP2Y;ID=intron:HG03009_ch_T0000713:0;Name=REREP2Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	28144842	28144914	.	-	.	source_transcript=hg002_chrY_paternal_668.1;source_transcript_name=hg002_chrY_paternal_668.1;source_gene=hg002_chrY_paternal_668;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_668;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_668.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_668.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP2Y;alternative_source_transcripts=hg002_chrY_paternal_668.1;transcript_id=HG03009_ch_T0000713;gene_id=HG03009_ch_G0000273;Parent=HG03009_ch_T0000713;transcript_name=hg002_chrY_paternal_668.1;gene_name=REREP2Y;ID=exon:HG03009_ch_T0000713:1;Name=REREP2Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	28144915	28171735	.	-	.	source_transcript=hg002_chrY_paternal_668.1;source_transcript_name=hg002_chrY_paternal_668.1;source_gene=hg002_chrY_paternal_668;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_668;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_668.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_668.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP2Y;alternative_source_transcripts=hg002_chrY_paternal_668.1;transcript_id=HG03009_ch_T0000713;gene_id=HG03009_ch_G0000273;Parent=HG03009_ch_T0000713;transcript_name=hg002_chrY_paternal_668.1;gene_name=REREP2Y;ID=intron:HG03009_ch_T0000713:1;Name=REREP2Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	28171736	28172138	.	-	.	source_transcript=hg002_chrY_paternal_668.1;source_transcript_name=hg002_chrY_paternal_668.1;source_gene=hg002_chrY_paternal_668;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_668;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_668.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_668.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP2Y;alternative_source_transcripts=hg002_chrY_paternal_668.1;transcript_id=HG03009_ch_T0000713;gene_id=HG03009_ch_G0000273;Parent=HG03009_ch_T0000713;transcript_name=hg002_chrY_paternal_668.1;gene_name=REREP2Y;ID=exon:HG03009_ch_T0000713:2;Name=REREP2Y;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	28184147	28184284	.	+	.	source_gene_common_name=LOC124900507;source_gene=hg002_chrY_paternal_669;alternative_source_transcripts=hg002_chrY_paternal_669.1;gene_id=HG03009_ch_G0000274;gene_biotype=snoRNA;gene_name=LOC124900507;gene_sources=liftoff;ID=HG03009_ch_G0000274;Name=LOC124900507
HG03009_chrY	CAT	transcript	28184147	28184284	1000	+	.	source_transcript=hg002_chrY_paternal_669.1;source_transcript_name=hg002_chrY_paternal_669.1;source_gene=hg002_chrY_paternal_669;source_gene_biotype=snoRNA;original_gene_id=hg002_chrY_paternal_669;gene_biotype=snoRNA;transcript_biotype=snoRNA;alignment_id=hg002_chrY_paternal_669.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_669.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124900507;alternative_source_transcripts=hg002_chrY_paternal_669.1;transcript_id=HG03009_ch_T0000714;gene_id=HG03009_ch_G0000274;Parent=HG03009_ch_G0000274;transcript_name=hg002_chrY_paternal_669.1;gene_name=LOC124900507;ID=HG03009_ch_T0000714;Name=LOC124900507
HG03009_chrY	CAT	exon	28184147	28184284	.	+	.	source_transcript=hg002_chrY_paternal_669.1;source_transcript_name=hg002_chrY_paternal_669.1;source_gene=hg002_chrY_paternal_669;source_gene_biotype=snoRNA;original_gene_id=hg002_chrY_paternal_669;gene_biotype=snoRNA;transcript_biotype=snoRNA;alignment_id=hg002_chrY_paternal_669.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_669.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124900507;alternative_source_transcripts=hg002_chrY_paternal_669.1;transcript_id=HG03009_ch_T0000714;gene_id=HG03009_ch_G0000274;Parent=HG03009_ch_T0000714;transcript_name=hg002_chrY_paternal_669.1;gene_name=LOC124900507;ID=exon:HG03009_ch_T0000714:0;Name=LOC124900507;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	28337919	28345913	.	-	.	source_gene_common_name=LOC105377244;source_gene=hg002_chrY_paternal_673;alternative_source_transcripts=hg002_chrY_paternal_673.1;gene_id=HG03009_ch_G0000275;gene_biotype=lncRNA;gene_name=LOC105377244;gene_sources=liftoff;ID=HG03009_ch_G0000275;Name=LOC105377244
HG03009_chrY	CAT	transcript	28337919	28345913	1000	-	.	source_transcript=hg002_chrY_paternal_673.1;source_transcript_name=hg002_chrY_paternal_673.1;source_gene=hg002_chrY_paternal_673;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_673;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_673.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_673.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377244;alternative_source_transcripts=hg002_chrY_paternal_673.1;transcript_id=HG03009_ch_T0000715;gene_id=HG03009_ch_G0000275;Parent=HG03009_ch_G0000275;transcript_name=hg002_chrY_paternal_673.1;gene_name=LOC105377244;ID=HG03009_ch_T0000715;Name=LOC105377244
HG03009_chrY	CAT	exon	28337919	28342521	.	-	.	source_transcript=hg002_chrY_paternal_673.1;source_transcript_name=hg002_chrY_paternal_673.1;source_gene=hg002_chrY_paternal_673;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_673;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_673.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_673.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377244;alternative_source_transcripts=hg002_chrY_paternal_673.1;transcript_id=HG03009_ch_T0000715;gene_id=HG03009_ch_G0000275;Parent=HG03009_ch_T0000715;transcript_name=hg002_chrY_paternal_673.1;gene_name=LOC105377244;ID=exon:HG03009_ch_T0000715:0;Name=LOC105377244;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	28342522	28343387	.	-	.	source_transcript=hg002_chrY_paternal_673.1;source_transcript_name=hg002_chrY_paternal_673.1;source_gene=hg002_chrY_paternal_673;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_673;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_673.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_673.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377244;alternative_source_transcripts=hg002_chrY_paternal_673.1;transcript_id=HG03009_ch_T0000715;gene_id=HG03009_ch_G0000275;Parent=HG03009_ch_T0000715;transcript_name=hg002_chrY_paternal_673.1;gene_name=LOC105377244;ID=intron:HG03009_ch_T0000715:0;Name=LOC105377244;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	28343388	28343554	.	-	.	source_transcript=hg002_chrY_paternal_673.1;source_transcript_name=hg002_chrY_paternal_673.1;source_gene=hg002_chrY_paternal_673;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_673;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_673.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_673.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377244;alternative_source_transcripts=hg002_chrY_paternal_673.1;transcript_id=HG03009_ch_T0000715;gene_id=HG03009_ch_G0000275;Parent=HG03009_ch_T0000715;transcript_name=hg002_chrY_paternal_673.1;gene_name=LOC105377244;ID=exon:HG03009_ch_T0000715:1;Name=LOC105377244;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	28343555	28345682	.	-	.	source_transcript=hg002_chrY_paternal_673.1;source_transcript_name=hg002_chrY_paternal_673.1;source_gene=hg002_chrY_paternal_673;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_673;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_673.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_673.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377244;alternative_source_transcripts=hg002_chrY_paternal_673.1;transcript_id=HG03009_ch_T0000715;gene_id=HG03009_ch_G0000275;Parent=HG03009_ch_T0000715;transcript_name=hg002_chrY_paternal_673.1;gene_name=LOC105377244;ID=intron:HG03009_ch_T0000715:1;Name=LOC105377244;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	28345683	28345913	.	-	.	source_transcript=hg002_chrY_paternal_673.1;source_transcript_name=hg002_chrY_paternal_673.1;source_gene=hg002_chrY_paternal_673;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_673;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_673.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_673.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377244;alternative_source_transcripts=hg002_chrY_paternal_673.1;transcript_id=HG03009_ch_T0000715;gene_id=HG03009_ch_G0000275;Parent=HG03009_ch_T0000715;transcript_name=hg002_chrY_paternal_673.1;gene_name=LOC105377244;ID=exon:HG03009_ch_T0000715:2;Name=LOC105377244;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	28361432	28377599	.	+	.	source_gene_common_name=LOC102723869;source_gene=hg002_chrY_paternal_675;alternative_source_transcripts=hg002_chrY_paternal_675.1;gene_id=HG03009_ch_G0000276;gene_biotype=lncRNA;gene_name=LOC102723869;gene_sources=liftoff;ID=HG03009_ch_G0000276;Name=LOC102723869
HG03009_chrY	CAT	transcript	28361432	28377599	1000	+	.	source_transcript=hg002_chrY_paternal_675.1;source_transcript_name=hg002_chrY_paternal_675.1;source_gene=hg002_chrY_paternal_675;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_675;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_675.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_675.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723869;alternative_source_transcripts=hg002_chrY_paternal_675.1;transcript_id=HG03009_ch_T0000716;gene_id=HG03009_ch_G0000276;Parent=HG03009_ch_G0000276;transcript_name=hg002_chrY_paternal_675.1;gene_name=LOC102723869;ID=HG03009_ch_T0000716;Name=LOC102723869
HG03009_chrY	CAT	exon	28361432	28361699	.	+	.	source_transcript=hg002_chrY_paternal_675.1;source_transcript_name=hg002_chrY_paternal_675.1;source_gene=hg002_chrY_paternal_675;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_675;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_675.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_675.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723869;alternative_source_transcripts=hg002_chrY_paternal_675.1;transcript_id=HG03009_ch_T0000716;gene_id=HG03009_ch_G0000276;Parent=HG03009_ch_T0000716;transcript_name=hg002_chrY_paternal_675.1;gene_name=LOC102723869;ID=exon:HG03009_ch_T0000716:0;Name=LOC102723869;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	28361700	28373729	.	+	.	source_transcript=hg002_chrY_paternal_675.1;source_transcript_name=hg002_chrY_paternal_675.1;source_gene=hg002_chrY_paternal_675;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_675;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_675.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_675.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723869;alternative_source_transcripts=hg002_chrY_paternal_675.1;transcript_id=HG03009_ch_T0000716;gene_id=HG03009_ch_G0000276;Parent=HG03009_ch_T0000716;transcript_name=hg002_chrY_paternal_675.1;gene_name=LOC102723869;ID=intron:HG03009_ch_T0000716:0;Name=LOC102723869;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	28373730	28373758	.	+	.	source_transcript=hg002_chrY_paternal_675.1;source_transcript_name=hg002_chrY_paternal_675.1;source_gene=hg002_chrY_paternal_675;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_675;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_675.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_675.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723869;alternative_source_transcripts=hg002_chrY_paternal_675.1;transcript_id=HG03009_ch_T0000716;gene_id=HG03009_ch_G0000276;Parent=HG03009_ch_T0000716;transcript_name=hg002_chrY_paternal_675.1;gene_name=LOC102723869;ID=exon:HG03009_ch_T0000716:1;Name=LOC102723869;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	28373759	28373852	.	+	.	source_transcript=hg002_chrY_paternal_675.1;source_transcript_name=hg002_chrY_paternal_675.1;source_gene=hg002_chrY_paternal_675;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_675;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_675.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_675.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723869;alternative_source_transcripts=hg002_chrY_paternal_675.1;transcript_id=HG03009_ch_T0000716;gene_id=HG03009_ch_G0000276;Parent=HG03009_ch_T0000716;transcript_name=hg002_chrY_paternal_675.1;gene_name=LOC102723869;ID=intron:HG03009_ch_T0000716:1;Name=LOC102723869;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	28373853	28373925	.	+	.	source_transcript=hg002_chrY_paternal_675.1;source_transcript_name=hg002_chrY_paternal_675.1;source_gene=hg002_chrY_paternal_675;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_675;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_675.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_675.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723869;alternative_source_transcripts=hg002_chrY_paternal_675.1;transcript_id=HG03009_ch_T0000716;gene_id=HG03009_ch_G0000276;Parent=HG03009_ch_T0000716;transcript_name=hg002_chrY_paternal_675.1;gene_name=LOC102723869;ID=exon:HG03009_ch_T0000716:2;Name=LOC102723869;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	28373926	28377568	.	+	.	source_transcript=hg002_chrY_paternal_675.1;source_transcript_name=hg002_chrY_paternal_675.1;source_gene=hg002_chrY_paternal_675;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_675;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_675.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_675.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723869;alternative_source_transcripts=hg002_chrY_paternal_675.1;transcript_id=HG03009_ch_T0000716;gene_id=HG03009_ch_G0000276;Parent=HG03009_ch_T0000716;transcript_name=hg002_chrY_paternal_675.1;gene_name=LOC102723869;ID=intron:HG03009_ch_T0000716:2;Name=LOC102723869;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	28377569	28377599	.	+	.	source_transcript=hg002_chrY_paternal_675.1;source_transcript_name=hg002_chrY_paternal_675.1;source_gene=hg002_chrY_paternal_675;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_675;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_675.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_675.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723869;alternative_source_transcripts=hg002_chrY_paternal_675.1;transcript_id=HG03009_ch_T0000716;gene_id=HG03009_ch_G0000276;Parent=HG03009_ch_T0000716;transcript_name=hg002_chrY_paternal_675.1;gene_name=LOC102723869;ID=exon:HG03009_ch_T0000716:3;Name=LOC102723869;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	58401802	58416501	.	+	.	source_gene_common_name=SPRY3;source_gene=hg002_chrY_paternal_683;alternative_source_transcripts=hg002_chrY_paternal_683.1,hg002_chrY_paternal_683.1;gene_id=HG03009_ch_G0000277;gene_biotype=protein_coding;gene_name=SPRY3;gene_sources=liftoff,augTM;ID=HG03009_ch_G0000277;Name=SPRY3
HG03009_chrY	CAT	transcript	58401802	58416501	100	+	.	source_transcript=hg002_chrY_paternal_683.1;source_transcript_name=hg002_chrY_paternal_683.1;source_gene=hg002_chrY_paternal_683;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_683;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_683.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_683.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SPRY3;alternative_source_transcripts=hg002_chrY_paternal_683.1,hg002_chrY_paternal_683.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000717;gene_id=HG03009_ch_G0000277;Parent=HG03009_ch_G0000277;transcript_name=hg002_chrY_paternal_683.1;gene_name=SPRY3;ID=HG03009_ch_T0000717;Name=SPRY3
HG03009_chrY	CAT	exon	58401802	58402142	.	+	.	source_transcript=hg002_chrY_paternal_683.1;source_transcript_name=hg002_chrY_paternal_683.1;source_gene=hg002_chrY_paternal_683;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_683;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_683.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_683.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SPRY3;alternative_source_transcripts=hg002_chrY_paternal_683.1,hg002_chrY_paternal_683.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000717;gene_id=HG03009_ch_G0000277;Parent=HG03009_ch_T0000717;transcript_name=hg002_chrY_paternal_683.1;gene_name=SPRY3;ID=exon:HG03009_ch_T0000717:0;Name=SPRY3;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58402143	58407770	.	+	.	source_transcript=hg002_chrY_paternal_683.1;source_transcript_name=hg002_chrY_paternal_683.1;source_gene=hg002_chrY_paternal_683;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_683;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_683.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_683.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SPRY3;alternative_source_transcripts=hg002_chrY_paternal_683.1,hg002_chrY_paternal_683.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000717;gene_id=HG03009_ch_G0000277;Parent=HG03009_ch_T0000717;transcript_name=hg002_chrY_paternal_683.1;gene_name=SPRY3;ID=intron:HG03009_ch_T0000717:0;Name=SPRY3;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58407771	58416501	.	+	.	source_transcript=hg002_chrY_paternal_683.1;source_transcript_name=hg002_chrY_paternal_683.1;source_gene=hg002_chrY_paternal_683;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_683;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_683.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_683.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SPRY3;alternative_source_transcripts=hg002_chrY_paternal_683.1,hg002_chrY_paternal_683.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000717;gene_id=HG03009_ch_G0000277;Parent=HG03009_ch_T0000717;transcript_name=hg002_chrY_paternal_683.1;gene_name=SPRY3;ID=exon:HG03009_ch_T0000717:1;Name=SPRY3;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58407877	58408743	.	+	0	source_transcript=hg002_chrY_paternal_683.1;source_transcript_name=hg002_chrY_paternal_683.1;source_gene=hg002_chrY_paternal_683;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_683;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_683.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_683.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SPRY3;alternative_source_transcripts=hg002_chrY_paternal_683.1,hg002_chrY_paternal_683.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000717;gene_id=HG03009_ch_G0000277;Parent=HG03009_ch_T0000717;transcript_name=hg002_chrY_paternal_683.1;gene_name=SPRY3;ID=CDS:HG03009_ch_T0000717:0;Name=SPRY3;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	58407877	58407879	.	+	0	source_transcript=hg002_chrY_paternal_683.1;source_transcript_name=hg002_chrY_paternal_683.1;source_gene=hg002_chrY_paternal_683;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_683;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_683.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_683.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SPRY3;alternative_source_transcripts=hg002_chrY_paternal_683.1,hg002_chrY_paternal_683.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000717;gene_id=HG03009_ch_G0000277;Parent=HG03009_ch_T0000717;transcript_name=hg002_chrY_paternal_683.1;gene_name=SPRY3;ID=start_codon:HG03009_ch_T0000717;Name=SPRY3;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	58408741	58408743	.	+	0	source_transcript=hg002_chrY_paternal_683.1;source_transcript_name=hg002_chrY_paternal_683.1;source_gene=hg002_chrY_paternal_683;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_683;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_683.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_683.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SPRY3;alternative_source_transcripts=hg002_chrY_paternal_683.1,hg002_chrY_paternal_683.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000717;gene_id=HG03009_ch_G0000277;Parent=HG03009_ch_T0000717;transcript_name=hg002_chrY_paternal_683.1;gene_name=SPRY3;ID=stop_codon:HG03009_ch_T0000717;Name=SPRY3;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	58518061	58580498	.	+	.	source_gene_common_name=VAMP7;source_gene=hg002_chrY_paternal_687;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;gene_id=HG03009_ch_G0000278;gene_biotype=protein_coding;gene_name=VAMP7;gene_sources=liftoff,augTM;ID=HG03009_ch_G0000278;Name=VAMP7
HG03009_chrY	CAT	transcript	58518061	58580498	100	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000718;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_G0000278;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=HG03009_ch_T0000718;Name=VAMP7
HG03009_chrY	CAT	exon	58518061	58518164	.	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000718;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000718;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03009_ch_T0000718:0;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58518165	58526175	.	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000718;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000718;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG03009_ch_T0000718:0;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58526176	58526265	.	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000718;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000718;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03009_ch_T0000718:1;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58526185	58526265	.	+	0	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000718;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000718;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG03009_ch_T0000718:0;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	58526185	58526187	.	+	0	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000718;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000718;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=start_codon:HG03009_ch_T0000718;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58526266	58534829	.	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000718;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000718;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG03009_ch_T0000718:1;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58534830	58534967	.	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000718;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000718;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03009_ch_T0000718:2;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58534830	58534967	.	+	0	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000718;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000718;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG03009_ch_T0000718:1;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58534968	58537214	.	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000718;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000718;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG03009_ch_T0000718:2;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58537215	58537305	.	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000718;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000718;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03009_ch_T0000718:3;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58537215	58537305	.	+	0	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000718;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000718;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG03009_ch_T0000718:2;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58537306	58556533	.	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000718;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000718;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG03009_ch_T0000718:3;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58556534	58556601	.	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000718;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000718;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03009_ch_T0000718:4;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58556534	58556601	.	+	2	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000718;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000718;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG03009_ch_T0000718:3;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58556602	58576430	.	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000718;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000718;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG03009_ch_T0000718:4;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58576431	58576523	.	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000718;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000718;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03009_ch_T0000718:5;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58576431	58576523	.	+	0	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000718;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000718;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG03009_ch_T0000718:4;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58576524	58578611	.	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000718;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000718;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG03009_ch_T0000718:5;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58578612	58580498	.	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000718;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000718;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03009_ch_T0000718:6;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58578612	58578680	.	+	0	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000718;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000718;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG03009_ch_T0000718:5;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	58578678	58578680	.	+	0	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000718;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000718;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=stop_codon:HG03009_ch_T0000718;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	58518061	58580498	100	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000719;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_G0000278;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=HG03009_ch_T0000719;Name=VAMP7
HG03009_chrY	CAT	exon	58518061	58518164	.	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000719;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000719;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03009_ch_T0000719:0;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58518165	58526175	.	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000719;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000719;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG03009_ch_T0000719:0;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58526176	58526330	.	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000719;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000719;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03009_ch_T0000719:1;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58526185	58526330	.	+	0	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000719;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000719;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG03009_ch_T0000719:0;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	58526185	58526187	.	+	0	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000719;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000719;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=start_codon:HG03009_ch_T0000719;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58526331	58532340	.	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000719;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000719;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG03009_ch_T0000719:1;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58532341	58532398	.	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000719;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000719;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03009_ch_T0000719:2;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58532341	58532398	.	+	1	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000719;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000719;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG03009_ch_T0000719:1;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58532399	58534829	.	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000719;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000719;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG03009_ch_T0000719:2;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58534830	58534967	.	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000719;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000719;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03009_ch_T0000719:3;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58534830	58534967	.	+	0	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000719;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000719;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG03009_ch_T0000719:2;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58534968	58537214	.	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000719;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000719;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG03009_ch_T0000719:3;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58537215	58537305	.	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000719;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000719;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03009_ch_T0000719:4;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58537215	58537305	.	+	0	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000719;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000719;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG03009_ch_T0000719:3;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58537306	58576430	.	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000719;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000719;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG03009_ch_T0000719:4;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58576431	58576523	.	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000719;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000719;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03009_ch_T0000719:5;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58576431	58576523	.	+	2	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000719;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000719;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG03009_ch_T0000719:4;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58576524	58578611	.	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000719;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000719;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG03009_ch_T0000719:5;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58578612	58580498	.	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000719;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000719;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03009_ch_T0000719:6;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58578612	58578868	.	+	2	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000719;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000719;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG03009_ch_T0000719:5;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	58578866	58578868	.	+	0	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000719;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000719;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=stop_codon:HG03009_ch_T0000719;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	58518061	58580498	100	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000720;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_G0000278;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=HG03009_ch_T0000720;Name=VAMP7
HG03009_chrY	CAT	exon	58518061	58518164	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000720;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000720;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03009_ch_T0000720:0;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58518165	58526175	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000720;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000720;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG03009_ch_T0000720:0;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58526176	58526330	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000720;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000720;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03009_ch_T0000720:1;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58526185	58526330	.	+	0	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000720;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000720;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG03009_ch_T0000720:0;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	58526185	58526187	.	+	0	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000720;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000720;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=start_codon:HG03009_ch_T0000720;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58526331	58532340	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000720;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000720;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG03009_ch_T0000720:1;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58532341	58532398	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000720;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000720;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03009_ch_T0000720:2;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58532341	58532398	.	+	1	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000720;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000720;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG03009_ch_T0000720:1;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58532399	58534829	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000720;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000720;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG03009_ch_T0000720:2;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58534830	58534967	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000720;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000720;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03009_ch_T0000720:3;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58534830	58534967	.	+	0	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000720;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000720;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG03009_ch_T0000720:2;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58534968	58537214	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000720;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000720;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG03009_ch_T0000720:3;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58537215	58537305	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000720;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000720;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03009_ch_T0000720:4;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58537215	58537305	.	+	0	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000720;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000720;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG03009_ch_T0000720:3;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58537306	58556533	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000720;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000720;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG03009_ch_T0000720:4;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58556534	58556601	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000720;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000720;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03009_ch_T0000720:5;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58556534	58556601	.	+	2	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000720;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000720;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG03009_ch_T0000720:4;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58556602	58576430	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000720;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000720;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG03009_ch_T0000720:5;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58576431	58576523	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000720;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000720;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03009_ch_T0000720:6;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58576431	58576523	.	+	0	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000720;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000720;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG03009_ch_T0000720:5;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58576524	58578611	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000720;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000720;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG03009_ch_T0000720:6;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58578612	58580498	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000720;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000720;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03009_ch_T0000720:7;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58578612	58578680	.	+	0	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000720;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000720;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG03009_ch_T0000720:6;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	58578678	58578680	.	+	0	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000720;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000720;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=stop_codon:HG03009_ch_T0000720;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	58518061	58580498	100	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000721;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_G0000278;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=HG03009_ch_T0000721;Name=VAMP7
HG03009_chrY	CAT	exon	58518061	58518164	.	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000721;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000721;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03009_ch_T0000721:0;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58518165	58526175	.	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000721;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000721;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG03009_ch_T0000721:0;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58526176	58526351	.	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000721;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000721;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03009_ch_T0000721:1;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58526347	58526351	.	+	0	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000721;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000721;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG03009_ch_T0000721:0;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	58526347	58526349	.	+	0	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000721;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000721;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=start_codon:HG03009_ch_T0000721;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58526352	58532340	.	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000721;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000721;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG03009_ch_T0000721:1;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58532341	58532398	.	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000721;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000721;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03009_ch_T0000721:2;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58532341	58532398	.	+	1	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000721;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000721;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG03009_ch_T0000721:1;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58532399	58534829	.	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000721;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000721;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG03009_ch_T0000721:2;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58534830	58534967	.	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000721;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000721;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03009_ch_T0000721:3;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58534830	58534967	.	+	0	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000721;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000721;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG03009_ch_T0000721:2;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58534968	58537214	.	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000721;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000721;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG03009_ch_T0000721:3;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58537215	58537305	.	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000721;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000721;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03009_ch_T0000721:4;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58537215	58537305	.	+	0	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000721;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000721;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG03009_ch_T0000721:3;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58537306	58576430	.	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000721;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000721;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG03009_ch_T0000721:4;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58576431	58576523	.	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000721;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000721;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03009_ch_T0000721:5;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58576431	58576523	.	+	2	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000721;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000721;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG03009_ch_T0000721:4;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58576524	58578611	.	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000721;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000721;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG03009_ch_T0000721:5;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58578612	58580498	.	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000721;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000721;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03009_ch_T0000721:6;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58578612	58578868	.	+	2	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000721;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000721;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG03009_ch_T0000721:5;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	58578866	58578868	.	+	0	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000721;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000721;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=stop_codon:HG03009_ch_T0000721;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	58518061	58580498	100	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000722;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_G0000278;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=HG03009_ch_T0000722;Name=VAMP7
HG03009_chrY	CAT	exon	58518061	58518164	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000722;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000722;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03009_ch_T0000722:0;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58518165	58526175	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000722;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000722;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG03009_ch_T0000722:0;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58526176	58526351	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000722;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000722;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03009_ch_T0000722:1;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58526347	58526351	.	+	0	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000722;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000722;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG03009_ch_T0000722:0;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	58526347	58526349	.	+	0	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000722;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000722;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=start_codon:HG03009_ch_T0000722;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58526352	58532340	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000722;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000722;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG03009_ch_T0000722:1;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58532341	58532398	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000722;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000722;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03009_ch_T0000722:2;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58532341	58532398	.	+	1	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000722;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000722;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG03009_ch_T0000722:1;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58532399	58534829	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000722;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000722;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG03009_ch_T0000722:2;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58534830	58534967	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000722;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000722;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03009_ch_T0000722:3;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58534830	58534967	.	+	0	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000722;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000722;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG03009_ch_T0000722:2;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58534968	58537214	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000722;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000722;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG03009_ch_T0000722:3;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58537215	58537305	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000722;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000722;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03009_ch_T0000722:4;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58537215	58537305	.	+	0	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000722;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000722;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG03009_ch_T0000722:3;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58537306	58556533	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000722;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000722;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG03009_ch_T0000722:4;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58556534	58556601	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000722;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000722;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03009_ch_T0000722:5;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58556534	58556601	.	+	2	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000722;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000722;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG03009_ch_T0000722:4;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58556602	58576430	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000722;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000722;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG03009_ch_T0000722:5;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58576431	58576523	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000722;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000722;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03009_ch_T0000722:6;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58576431	58576523	.	+	0	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000722;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000722;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG03009_ch_T0000722:5;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58576524	58578611	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000722;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000722;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG03009_ch_T0000722:6;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58578612	58580498	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000722;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000722;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03009_ch_T0000722:7;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58578612	58578680	.	+	0	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000722;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000722;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG03009_ch_T0000722:6;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	58578678	58578680	.	+	0	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000722;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000722;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=stop_codon:HG03009_ch_T0000722;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	58518061	58580498	1000	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000723;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_G0000278;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=HG03009_ch_T0000723;Name=VAMP7
HG03009_chrY	CAT	exon	58518061	58518164	.	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000723;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000723;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:HG03009_ch_T0000723:0;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58518165	58526175	.	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000723;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000723;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=intron:HG03009_ch_T0000723:0;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58526176	58526330	.	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000723;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000723;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:HG03009_ch_T0000723:1;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58526331	58534829	.	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000723;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000723;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=intron:HG03009_ch_T0000723:1;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58534830	58534967	.	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000723;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000723;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:HG03009_ch_T0000723:2;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58534968	58537214	.	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000723;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000723;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=intron:HG03009_ch_T0000723:2;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58537215	58537305	.	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000723;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000723;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:HG03009_ch_T0000723:3;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58537306	58556533	.	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000723;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000723;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=intron:HG03009_ch_T0000723:3;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58556534	58556601	.	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000723;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000723;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:HG03009_ch_T0000723:4;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58556602	58576430	.	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000723;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000723;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=intron:HG03009_ch_T0000723:4;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58576431	58576523	.	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000723;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000723;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:HG03009_ch_T0000723:5;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58576524	58578611	.	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000723;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000723;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=intron:HG03009_ch_T0000723:5;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58578612	58580498	.	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000723;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000723;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:HG03009_ch_T0000723:6;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	58518061	58580498	1000	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000724;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_G0000278;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=HG03009_ch_T0000724;Name=VAMP7
HG03009_chrY	CAT	exon	58518061	58518164	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000724;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000724;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:HG03009_ch_T0000724:0;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58518165	58526175	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000724;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000724;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=intron:HG03009_ch_T0000724:0;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58526176	58526265	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000724;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000724;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:HG03009_ch_T0000724:1;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58526266	58532340	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000724;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000724;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=intron:HG03009_ch_T0000724:1;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58532341	58532398	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000724;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000724;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:HG03009_ch_T0000724:2;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58532399	58534829	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000724;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000724;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=intron:HG03009_ch_T0000724:2;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58534830	58534967	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000724;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000724;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:HG03009_ch_T0000724:3;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58534968	58537214	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000724;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000724;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=intron:HG03009_ch_T0000724:3;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58537215	58537305	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000724;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000724;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:HG03009_ch_T0000724:4;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58537306	58556533	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000724;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000724;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=intron:HG03009_ch_T0000724:4;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58556534	58556601	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000724;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000724;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:HG03009_ch_T0000724:5;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58556602	58576430	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000724;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000724;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=intron:HG03009_ch_T0000724:5;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58576431	58576523	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000724;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000724;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:HG03009_ch_T0000724:6;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58576524	58578611	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000724;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000724;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=intron:HG03009_ch_T0000724:6;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58578612	58580498	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000724;gene_id=HG03009_ch_G0000278;Parent=HG03009_ch_T0000724;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:HG03009_ch_T0000724:7;Name=VAMP7;rna_support=False;reference_support=False
HG03009_chrY	CAT	gene	58634285	58647550	.	+	.	source_gene_common_name=IL9R;source_gene=hg002_chrY_paternal_691;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;gene_id=HG03009_ch_G0000279;gene_biotype=protein_coding;gene_name=IL9R;gene_sources=liftoff,augTM;ID=HG03009_ch_G0000279;Name=IL9R
HG03009_chrY	CAT	transcript	58634285	58647550	100	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000725;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_G0000279;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=HG03009_ch_T0000725;Name=IL9R
HG03009_chrY	CAT	exon	58634285	58634520	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000725;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000725;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000725:0;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58634477	58634520	.	+	0	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000725;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000725;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000725:0;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	58634477	58634479	.	+	0	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000725;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000725;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=start_codon:HG03009_ch_T0000725;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58634521	58638141	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000725;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000725;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03009_ch_T0000725:0;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58638142	58638242	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000725;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000725;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000725:1;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58638142	58638242	.	+	1	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000725;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000725;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000725:1;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58638243	58639643	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000725;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000725;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03009_ch_T0000725:1;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58639644	58639757	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000725;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000725;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000725:2;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58639644	58639757	.	+	2	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000725;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000725;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000725:2;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58639758	58640186	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000725;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000725;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03009_ch_T0000725:2;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58640187	58640298	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000725;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000725;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000725:3;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58640187	58640298	.	+	2	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000725;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000725;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000725:3;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58640299	58640414	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000725;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000725;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03009_ch_T0000725:3;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58640415	58640593	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000725;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000725;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000725:4;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58640415	58640593	.	+	1	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000725;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000725;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000725:4;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58640594	58641157	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000725;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000725;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03009_ch_T0000725:4;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58641158	58641303	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000725;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000725;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000725:5;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58641158	58641303	.	+	2	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000725;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000725;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000725:5;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58641304	58642018	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000725;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000725;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03009_ch_T0000725:5;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58642019	58642217	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000725;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000725;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000725:6;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58642019	58642217	.	+	0	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000725;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000725;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000725:6;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58642218	58642820	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000725;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000725;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03009_ch_T0000725:6;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58642821	58642926	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000725;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000725;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000725:7;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58642821	58642926	.	+	2	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000725;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000725;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000725:7;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58642927	58646548	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000725;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000725;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03009_ch_T0000725:7;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58646549	58647550	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000725;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000725;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000725:8;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58646549	58646585	.	+	1	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000725;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000725;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000725:8;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	58646583	58646585	.	+	0	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000725;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000725;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=stop_codon:HG03009_ch_T0000725;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	58634342	58647550	100	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000726;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_G0000279;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=HG03009_ch_T0000726;Name=IL9R
HG03009_chrY	CAT	exon	58634342	58634520	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000726;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000726;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000726:0;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58634477	58634520	.	+	0	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000726;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000726;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000726:0;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	58634477	58634479	.	+	0	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000726;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000726;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=start_codon:HG03009_ch_T0000726;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58634521	58638141	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000726;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000726;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03009_ch_T0000726:0;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58638142	58638242	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000726;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000726;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000726:1;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58638142	58638242	.	+	1	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000726;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000726;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000726:1;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58638243	58639619	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000726;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000726;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03009_ch_T0000726:1;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58639620	58639757	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000726;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000726;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000726:2;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58639620	58639757	.	+	2	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000726;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000726;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000726:2;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58639758	58640186	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000726;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000726;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03009_ch_T0000726:2;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58640187	58640298	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000726;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000726;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000726:3;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58640187	58640298	.	+	2	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000726;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000726;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000726:3;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58640299	58640414	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000726;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000726;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03009_ch_T0000726:3;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58640415	58640593	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000726;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000726;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000726:4;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58640415	58640593	.	+	1	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000726;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000726;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000726:4;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58640594	58641157	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000726;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000726;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03009_ch_T0000726:4;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58641158	58641303	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000726;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000726;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000726:5;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58641158	58641303	.	+	2	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000726;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000726;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000726:5;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58641304	58642015	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000726;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000726;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03009_ch_T0000726:5;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58642016	58642217	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000726;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000726;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000726:6;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58642016	58642217	.	+	0	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000726;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000726;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000726:6;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58642218	58642820	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000726;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000726;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03009_ch_T0000726:6;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58642821	58642926	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000726;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000726;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000726:7;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58642821	58642926	.	+	2	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000726;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000726;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000726:7;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58642927	58644261	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000726;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000726;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03009_ch_T0000726:7;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58644262	58644346	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000726;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000726;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000726:8;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58644262	58644346	.	+	1	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000726;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000726;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000726:8;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58644347	58644636	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000726;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000726;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03009_ch_T0000726:8;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58644637	58644869	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000726;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000726;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000726:9;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58644637	58644869	.	+	0	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000726;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000726;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000726:9;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58644870	58646548	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000726;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000726;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03009_ch_T0000726:9;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58646549	58647550	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000726;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000726;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000726:10;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58646549	58646585	.	+	1	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000726;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000726;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000726:10;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	58646583	58646585	.	+	0	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000726;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000726;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=stop_codon:HG03009_ch_T0000726;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	58634342	58647550	100	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000727;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_G0000279;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=HG03009_ch_T0000727;Name=IL9R
HG03009_chrY	CAT	exon	58634342	58634520	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000727;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000727;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000727:0;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58634477	58634520	.	+	0	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000727;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000727;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000727:0;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	58634477	58634479	.	+	0	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000727;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000727;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=start_codon:HG03009_ch_T0000727;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58634521	58638141	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000727;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000727;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03009_ch_T0000727:0;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58638142	58638242	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000727;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000727;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000727:1;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58638142	58638242	.	+	1	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000727;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000727;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000727:1;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58638243	58639619	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000727;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000727;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03009_ch_T0000727:1;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58639620	58639757	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000727;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000727;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000727:2;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58639620	58639757	.	+	2	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000727;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000727;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000727:2;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58639758	58640186	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000727;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000727;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03009_ch_T0000727:2;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58640187	58640298	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000727;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000727;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000727:3;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58640187	58640298	.	+	2	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000727;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000727;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000727:3;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58640299	58640414	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000727;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000727;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03009_ch_T0000727:3;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58640415	58640593	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000727;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000727;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000727:4;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58640415	58640593	.	+	1	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000727;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000727;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000727:4;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58640594	58641157	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000727;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000727;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03009_ch_T0000727:4;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58641158	58641303	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000727;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000727;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000727:5;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58641158	58641303	.	+	2	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000727;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000727;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000727:5;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58641304	58642015	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000727;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000727;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03009_ch_T0000727:5;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58642016	58642217	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000727;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000727;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000727:6;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58642016	58642217	.	+	0	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000727;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000727;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000727:6;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58642218	58642820	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000727;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000727;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03009_ch_T0000727:6;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58642821	58642926	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000727;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000727;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000727:7;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58642821	58642926	.	+	2	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000727;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000727;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000727:7;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58642927	58646548	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000727;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000727;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03009_ch_T0000727:7;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58646549	58647550	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000727;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000727;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000727:8;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58646549	58646585	.	+	1	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000727;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000727;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000727:8;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	58646583	58646585	.	+	0	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000727;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000727;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=stop_codon:HG03009_ch_T0000727;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	58634342	58647550	100	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000728;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_G0000279;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=HG03009_ch_T0000728;Name=IL9R
HG03009_chrY	CAT	exon	58634342	58634520	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000728;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000728;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000728:0;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58634477	58634520	.	+	0	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000728;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000728;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000728:0;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	58634477	58634479	.	+	0	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000728;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000728;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=start_codon:HG03009_ch_T0000728;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58634521	58638141	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000728;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000728;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03009_ch_T0000728:0;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58638142	58638242	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000728;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000728;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000728:1;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58638142	58638242	.	+	1	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000728;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000728;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000728:1;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58638243	58639619	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000728;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000728;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03009_ch_T0000728:1;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58639620	58639757	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000728;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000728;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000728:2;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58639620	58639757	.	+	2	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000728;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000728;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000728:2;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58639758	58640186	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000728;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000728;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03009_ch_T0000728:2;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58640187	58640298	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000728;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000728;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000728:3;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58640187	58640298	.	+	2	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000728;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000728;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000728:3;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58640299	58640414	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000728;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000728;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03009_ch_T0000728:3;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58640415	58640593	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000728;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000728;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000728:4;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58640415	58640593	.	+	1	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000728;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000728;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000728:4;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58640594	58641157	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000728;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000728;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03009_ch_T0000728:4;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58641158	58641303	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000728;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000728;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000728:5;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58641158	58641303	.	+	2	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000728;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000728;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000728:5;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58641304	58642018	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000728;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000728;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03009_ch_T0000728:5;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58642019	58642217	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000728;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000728;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000728:6;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58642019	58642217	.	+	0	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000728;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000728;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000728:6;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58642218	58642820	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000728;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000728;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03009_ch_T0000728:6;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58642821	58642926	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000728;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000728;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000728:7;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58642821	58642926	.	+	2	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000728;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000728;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000728:7;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58642927	58644261	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000728;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000728;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03009_ch_T0000728:7;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58644262	58644346	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000728;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000728;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000728:8;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58644262	58644346	.	+	1	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000728;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000728;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000728:8;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58644347	58644636	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000728;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000728;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03009_ch_T0000728:8;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58644637	58644869	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000728;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000728;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000728:9;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58644637	58644869	.	+	0	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000728;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000728;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000728:9;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58644870	58646548	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000728;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000728;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03009_ch_T0000728:9;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58646549	58647550	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000728;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000728;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000728:10;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58646549	58646585	.	+	1	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000728;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000728;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000728:10;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	58646583	58646585	.	+	0	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000728;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000728;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=stop_codon:HG03009_ch_T0000728;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	58634342	58648082	100	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000729;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_G0000279;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=HG03009_ch_T0000729;Name=IL9R
HG03009_chrY	CAT	exon	58634342	58634520	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000729;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000729;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000729:0;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58634477	58634520	.	+	0	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000729;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000729;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000729:0;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	58634477	58634479	.	+	0	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000729;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000729;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=start_codon:HG03009_ch_T0000729;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58634521	58638141	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000729;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000729;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03009_ch_T0000729:0;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58638142	58638242	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000729;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000729;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000729:1;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58638142	58638242	.	+	1	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000729;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000729;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000729:1;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58638243	58639643	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000729;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000729;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03009_ch_T0000729:1;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58639644	58639757	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000729;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000729;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000729:2;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58639644	58639757	.	+	2	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000729;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000729;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000729:2;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58639758	58640186	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000729;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000729;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03009_ch_T0000729:2;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58640187	58640298	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000729;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000729;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000729:3;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58640187	58640298	.	+	2	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000729;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000729;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000729:3;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58640299	58640414	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000729;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000729;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03009_ch_T0000729:3;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58640415	58640593	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000729;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000729;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000729:4;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58640415	58640593	.	+	1	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000729;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000729;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000729:4;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58640594	58641157	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000729;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000729;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03009_ch_T0000729:4;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58641158	58641303	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000729;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000729;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000729:5;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58641158	58641303	.	+	2	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000729;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000729;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000729:5;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58641304	58642015	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000729;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000729;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03009_ch_T0000729:5;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58642016	58642217	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000729;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000729;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000729:6;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58642016	58642217	.	+	0	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000729;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000729;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000729:6;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58642218	58642820	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000729;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000729;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03009_ch_T0000729:6;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58642821	58642926	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000729;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000729;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000729:7;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58642821	58642926	.	+	2	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000729;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000729;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000729:7;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58642927	58644261	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000729;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000729;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03009_ch_T0000729:7;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58644262	58644346	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000729;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000729;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000729:8;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58644262	58644346	.	+	1	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000729;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000729;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000729:8;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58644347	58644636	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000729;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000729;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03009_ch_T0000729:8;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58644637	58648082	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000729;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000729;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000729:9;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58644637	58644873	.	+	0	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000729;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000729;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000729:9;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	58644871	58644873	.	+	0	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000729;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000729;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=stop_codon:HG03009_ch_T0000729;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	58634348	58647550	100	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000730;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_G0000279;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=HG03009_ch_T0000730;Name=IL9R
HG03009_chrY	CAT	exon	58634348	58634520	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000730;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000730;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000730:0;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58634477	58634520	.	+	0	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000730;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000730;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000730:0;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	58634477	58634479	.	+	0	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000730;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000730;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=start_codon:HG03009_ch_T0000730;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58634521	58638141	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000730;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000730;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03009_ch_T0000730:0;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58638142	58638242	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000730;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000730;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000730:1;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58638142	58638242	.	+	1	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000730;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000730;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000730:1;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58638243	58639619	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000730;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000730;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03009_ch_T0000730:1;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58639620	58639757	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000730;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000730;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000730:2;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58639620	58639757	.	+	2	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000730;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000730;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000730:2;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58639758	58640186	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000730;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000730;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03009_ch_T0000730:2;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58640187	58640298	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000730;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000730;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000730:3;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58640187	58640298	.	+	2	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000730;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000730;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000730:3;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58640299	58640414	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000730;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000730;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03009_ch_T0000730:3;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58640415	58640593	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000730;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000730;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000730:4;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58640415	58640593	.	+	1	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000730;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000730;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000730:4;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58640594	58641157	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000730;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000730;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03009_ch_T0000730:4;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58641158	58641303	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000730;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000730;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000730:5;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58641158	58641303	.	+	2	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000730;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000730;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000730:5;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58641304	58642018	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000730;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000730;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03009_ch_T0000730:5;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58642019	58642217	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000730;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000730;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000730:6;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58642019	58642217	.	+	0	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000730;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000730;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000730:6;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58642218	58642820	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000730;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000730;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03009_ch_T0000730:6;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58642821	58642926	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000730;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000730;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000730:7;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58642821	58642926	.	+	2	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000730;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000730;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000730:7;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58642927	58644261	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000730;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000730;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03009_ch_T0000730:7;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58644262	58644346	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000730;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000730;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000730:8;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58644262	58644346	.	+	1	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000730;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000730;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000730:8;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58644347	58646548	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000730;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000730;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03009_ch_T0000730:8;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58646549	58647550	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000730;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000730;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000730:9;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58646549	58647142	.	+	0	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000730;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000730;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000730:9;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	58647140	58647142	.	+	0	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000730;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000730;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=stop_codon:HG03009_ch_T0000730;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	58634350	58647550	100	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000731;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_G0000279;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=HG03009_ch_T0000731;Name=IL9R
HG03009_chrY	CAT	exon	58634350	58634520	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000731;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000731;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000731:0;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58634477	58634520	.	+	0	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000731;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000731;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000731:0;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	58634477	58634479	.	+	0	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000731;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000731;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=start_codon:HG03009_ch_T0000731;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58634521	58638141	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000731;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000731;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03009_ch_T0000731:0;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58638142	58638242	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000731;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000731;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000731:1;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58638142	58638242	.	+	1	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000731;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000731;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000731:1;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58638243	58639619	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000731;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000731;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03009_ch_T0000731:1;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58639620	58639757	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000731;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000731;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000731:2;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58639620	58639757	.	+	2	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000731;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000731;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000731:2;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58639758	58640186	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000731;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000731;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03009_ch_T0000731:2;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58640187	58640298	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000731;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000731;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000731:3;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58640187	58640298	.	+	2	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000731;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000731;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000731:3;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58640299	58640414	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000731;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000731;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03009_ch_T0000731:3;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58640415	58640593	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000731;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000731;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000731:4;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58640415	58640593	.	+	1	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000731;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000731;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000731:4;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58640594	58641157	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000731;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000731;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03009_ch_T0000731:4;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58641158	58641303	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000731;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000731;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000731:5;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58641158	58641303	.	+	2	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000731;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000731;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000731:5;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58641304	58642015	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000731;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000731;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03009_ch_T0000731:5;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58642016	58642217	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000731;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000731;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000731:6;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58642016	58642217	.	+	0	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000731;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000731;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000731:6;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58642218	58642820	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000731;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000731;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03009_ch_T0000731:6;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58642821	58642926	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000731;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000731;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000731:7;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58642821	58642926	.	+	2	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000731;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000731;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000731:7;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58642927	58644261	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000731;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000731;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03009_ch_T0000731:7;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58644262	58644346	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000731;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000731;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000731:8;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58644262	58644346	.	+	1	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000731;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000731;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000731:8;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58644347	58646548	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000731;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000731;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03009_ch_T0000731:8;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58646549	58647550	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000731;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000731;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000731:9;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58646549	58647142	.	+	0	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000731;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000731;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000731:9;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	58647140	58647142	.	+	0	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000731;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000731;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=stop_codon:HG03009_ch_T0000731;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	58634350	58647550	100	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000732;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_G0000279;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=HG03009_ch_T0000732;Name=IL9R
HG03009_chrY	CAT	exon	58634350	58634520	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000732;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000732;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000732:0;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58634477	58634520	.	+	0	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000732;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000732;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000732:0;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	58634477	58634479	.	+	0	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000732;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000732;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=start_codon:HG03009_ch_T0000732;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58634521	58638141	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000732;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000732;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03009_ch_T0000732:0;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58638142	58638242	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000732;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000732;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000732:1;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58638142	58638242	.	+	1	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000732;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000732;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000732:1;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58638243	58639643	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000732;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000732;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03009_ch_T0000732:1;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58639644	58639757	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000732;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000732;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000732:2;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58639644	58639757	.	+	2	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000732;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000732;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000732:2;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58639758	58640186	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000732;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000732;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03009_ch_T0000732:2;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58640187	58640298	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000732;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000732;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000732:3;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58640187	58640298	.	+	2	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000732;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000732;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000732:3;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58640299	58640414	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000732;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000732;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03009_ch_T0000732:3;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58640415	58640593	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000732;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000732;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000732:4;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58640415	58640593	.	+	1	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000732;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000732;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000732:4;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58640594	58641157	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000732;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000732;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03009_ch_T0000732:4;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58641158	58641303	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000732;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000732;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000732:5;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58641158	58641303	.	+	2	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000732;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000732;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000732:5;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58641304	58642015	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000732;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000732;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03009_ch_T0000732:5;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58642016	58642217	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000732;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000732;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000732:6;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58642016	58642217	.	+	0	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000732;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000732;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000732:6;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58642218	58642820	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000732;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000732;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03009_ch_T0000732:6;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58642821	58642926	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000732;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000732;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000732:7;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58642821	58642926	.	+	2	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000732;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000732;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000732:7;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58642927	58644261	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000732;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000732;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03009_ch_T0000732:7;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58644262	58644346	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000732;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000732;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000732:8;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58644262	58644346	.	+	1	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000732;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000732;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000732:8;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58644347	58646548	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000732;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000732;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03009_ch_T0000732:8;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58646549	58647550	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000732;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000732;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000732:9;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58646549	58647142	.	+	0	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000732;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000732;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000732:9;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	58647140	58647142	.	+	0	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000732;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000732;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=stop_codon:HG03009_ch_T0000732;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	58634352	58647550	100	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000733;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_G0000279;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=HG03009_ch_T0000733;Name=IL9R
HG03009_chrY	CAT	exon	58634352	58634520	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000733;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000733;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000733:0;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58634521	58638063	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000733;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000733;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03009_ch_T0000733:0;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58638064	58639757	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000733;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000733;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000733:1;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58639607	58639757	.	+	0	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000733;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000733;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000733:0;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	58639607	58639609	.	+	0	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000733;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000733;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=start_codon:HG03009_ch_T0000733;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58639758	58640186	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000733;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000733;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03009_ch_T0000733:1;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58640187	58640298	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000733;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000733;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000733:2;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58640187	58640298	.	+	2	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000733;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000733;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000733:1;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58640299	58640414	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000733;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000733;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03009_ch_T0000733:2;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58640415	58640593	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000733;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000733;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000733:3;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58640415	58640593	.	+	1	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000733;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000733;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000733:2;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58640594	58641157	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000733;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000733;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03009_ch_T0000733:3;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58641158	58641303	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000733;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000733;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000733:4;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58641158	58641303	.	+	2	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000733;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000733;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000733:3;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58641304	58642015	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000733;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000733;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03009_ch_T0000733:4;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58642016	58642217	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000733;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000733;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000733:5;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58642016	58642217	.	+	0	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000733;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000733;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000733:4;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58642218	58642820	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000733;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000733;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03009_ch_T0000733:5;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58642821	58642926	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000733;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000733;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000733:6;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58642821	58642926	.	+	2	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000733;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000733;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000733:5;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58642927	58644261	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000733;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000733;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03009_ch_T0000733:6;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58644262	58644346	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000733;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000733;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000733:7;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58644262	58644346	.	+	1	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000733;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000733;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000733:6;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58644347	58646548	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000733;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000733;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03009_ch_T0000733:7;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58646549	58647550	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000733;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000733;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000733:8;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58646549	58647142	.	+	0	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000733;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000733;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000733:7;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	58647140	58647142	.	+	0	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000733;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000733;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=stop_codon:HG03009_ch_T0000733;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	58634355	58647550	100	+	.	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000734;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_G0000279;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=HG03009_ch_T0000734;Name=IL9R
HG03009_chrY	CAT	exon	58634355	58634520	.	+	.	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000734;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000734;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000734:0;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58634493	58634520	.	+	0	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000734;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000734;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000734:0;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	58634493	58634495	.	+	0	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000734;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000734;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=start_codon:HG03009_ch_T0000734;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58634521	58641157	.	+	.	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000734;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000734;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03009_ch_T0000734:0;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58641158	58641303	.	+	.	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000734;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000734;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000734:1;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58641158	58641303	.	+	2	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000734;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000734;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000734:1;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58641304	58642015	.	+	.	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000734;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000734;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03009_ch_T0000734:1;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58642016	58642217	.	+	.	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000734;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000734;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000734:2;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58642016	58642217	.	+	0	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000734;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000734;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000734:2;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58642218	58642820	.	+	.	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000734;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000734;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03009_ch_T0000734:2;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58642821	58642926	.	+	.	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000734;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000734;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000734:3;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58642821	58642926	.	+	2	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000734;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000734;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000734:3;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58642927	58644261	.	+	.	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000734;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000734;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03009_ch_T0000734:3;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58644262	58644346	.	+	.	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000734;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000734;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000734:4;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58644262	58644346	.	+	1	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000734;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000734;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000734:4;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58644347	58646548	.	+	.	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000734;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000734;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03009_ch_T0000734:4;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58646549	58647550	.	+	.	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000734;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000734;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000734:5;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58646549	58647142	.	+	0	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000734;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000734;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000734:5;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	58647140	58647142	.	+	0	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000734;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000734;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=stop_codon:HG03009_ch_T0000734;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	58634429	58647550	100	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000735;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_G0000279;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=HG03009_ch_T0000735;Name=IL9R
HG03009_chrY	CAT	exon	58634429	58634520	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000735;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000735;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000735:0;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58634493	58634520	.	+	0	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000735;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000735;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000735:0;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	58634493	58634495	.	+	0	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000735;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000735;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=start_codon:HG03009_ch_T0000735;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58634521	58639643	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000735;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000735;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03009_ch_T0000735:0;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58639644	58639757	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000735;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000735;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000735:1;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58639644	58639757	.	+	2	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000735;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000735;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000735:1;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58639758	58640186	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000735;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000735;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03009_ch_T0000735:1;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58640187	58640298	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000735;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000735;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000735:2;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58640187	58640298	.	+	2	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000735;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000735;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000735:2;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58640299	58640414	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000735;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000735;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03009_ch_T0000735:2;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58640415	58640593	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000735;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000735;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000735:3;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58640415	58640593	.	+	1	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000735;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000735;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000735:3;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58640594	58641157	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000735;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000735;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03009_ch_T0000735:3;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58641158	58641303	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000735;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000735;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000735:4;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58641158	58641303	.	+	2	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000735;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000735;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000735:4;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58641304	58642015	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000735;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000735;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03009_ch_T0000735:4;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58642016	58642217	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000735;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000735;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000735:5;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58642016	58642217	.	+	0	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000735;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000735;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000735:5;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58642218	58642820	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000735;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000735;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03009_ch_T0000735:5;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58642821	58642926	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000735;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000735;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000735:6;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58642821	58642926	.	+	2	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000735;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000735;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000735:6;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58642927	58644261	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000735;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000735;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03009_ch_T0000735:6;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58644262	58644346	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000735;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000735;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000735:7;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58644262	58644346	.	+	1	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000735;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000735;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000735:7;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58644347	58646548	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000735;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000735;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03009_ch_T0000735:7;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58646549	58647550	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000735;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000735;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000735:8;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58646549	58647142	.	+	0	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000735;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000735;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000735:8;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	58647140	58647142	.	+	0	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000735;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000735;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=stop_codon:HG03009_ch_T0000735;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	58634429	58647550	100	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000736;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_G0000279;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=HG03009_ch_T0000736;Name=IL9R
HG03009_chrY	CAT	exon	58634429	58634520	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000736;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000736;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000736:0;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58634477	58634520	.	+	0	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000736;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000736;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000736:0;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	58634477	58634479	.	+	0	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000736;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000736;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=start_codon:HG03009_ch_T0000736;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58634521	58638141	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000736;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000736;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03009_ch_T0000736:0;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58638142	58638242	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000736;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000736;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000736:1;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58638142	58638242	.	+	1	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000736;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000736;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000736:1;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58638243	58639619	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000736;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000736;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03009_ch_T0000736:1;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58639620	58639757	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000736;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000736;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000736:2;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58639620	58639757	.	+	2	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000736;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000736;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000736:2;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58639758	58640186	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000736;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000736;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03009_ch_T0000736:2;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58640187	58640298	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000736;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000736;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000736:3;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58640187	58640298	.	+	2	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000736;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000736;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000736:3;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58640299	58640421	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000736;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000736;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03009_ch_T0000736:3;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58640422	58640593	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000736;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000736;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000736:4;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58640422	58640593	.	+	1	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000736;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000736;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000736:4;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58640594	58641186	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000736;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000736;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03009_ch_T0000736:4;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58641187	58641303	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000736;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000736;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000736:5;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58641187	58641303	.	+	0	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000736;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000736;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000736:5;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58641304	58642015	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000736;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000736;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03009_ch_T0000736:5;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58642016	58642217	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000736;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000736;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000736:6;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58642016	58642217	.	+	0	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000736;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000736;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000736:6;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58642218	58642820	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000736;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000736;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03009_ch_T0000736:6;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58642821	58642926	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000736;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000736;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000736:7;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58642821	58642926	.	+	2	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000736;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000736;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000736:7;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58642927	58646548	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000736;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000736;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03009_ch_T0000736:7;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58646549	58647550	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000736;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000736;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000736:8;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58646549	58646585	.	+	1	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000736;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000736;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000736:8;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	58646583	58646585	.	+	0	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000736;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000736;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=stop_codon:HG03009_ch_T0000736;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	transcript	58642543	58647550	100	+	.	source_transcript=hg002_chrY_paternal_691.13;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.13;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.13,hg002_chrY_paternal_691.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000737;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_G0000279;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=HG03009_ch_T0000737;Name=IL9R
HG03009_chrY	CAT	exon	58642543	58642755	.	+	.	source_transcript=hg002_chrY_paternal_691.13;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.13,hg002_chrY_paternal_691.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000737;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000737;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000737:0;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58642571	58642755	.	+	0	source_transcript=hg002_chrY_paternal_691.13;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.13,hg002_chrY_paternal_691.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000737;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000737;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000737:0;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	start_codon	58642571	58642573	.	+	0	source_transcript=hg002_chrY_paternal_691.13;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.13,hg002_chrY_paternal_691.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000737;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000737;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=start_codon:HG03009_ch_T0000737;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58642756	58644261	.	+	.	source_transcript=hg002_chrY_paternal_691.13;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.13,hg002_chrY_paternal_691.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000737;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000737;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03009_ch_T0000737:0;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58644262	58644346	.	+	.	source_transcript=hg002_chrY_paternal_691.13;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.13,hg002_chrY_paternal_691.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000737;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000737;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000737:1;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58644262	58644346	.	+	1	source_transcript=hg002_chrY_paternal_691.13;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.13,hg002_chrY_paternal_691.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000737;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000737;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000737:1;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	intron	58644347	58646548	.	+	.	source_transcript=hg002_chrY_paternal_691.13;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.13,hg002_chrY_paternal_691.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000737;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000737;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03009_ch_T0000737:1;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	exon	58646549	58647550	.	+	.	source_transcript=hg002_chrY_paternal_691.13;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.13,hg002_chrY_paternal_691.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000737;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000737;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03009_ch_T0000737:2;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	CDS	58646549	58647142	.	+	0	source_transcript=hg002_chrY_paternal_691.13;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.13,hg002_chrY_paternal_691.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000737;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000737;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03009_ch_T0000737:2;Name=IL9R;rna_support=False;reference_support=False
HG03009_chrY	CAT	stop_codon	58647140	58647142	.	+	0	source_transcript=hg002_chrY_paternal_691.13;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.13,hg002_chrY_paternal_691.13;AdditionalSources=augTM;transcript_id=HG03009_ch_T0000737;gene_id=HG03009_ch_G0000279;Parent=HG03009_ch_T0000737;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=stop_codon:HG03009_ch_T0000737;Name=IL9R;rna_support=False;reference_support=False